pre-miRNA Information
pre-miRNA hsa-mir-6867   
Genomic Coordinates chr17: 40193597 - 40193663
Description Homo sapiens miR-6867 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6867-3p
Sequence 47| CUCUCCCUCUUUACCCACUAG |67
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM7811173 21 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1403216522 1 dbSNP
rs781776276 3 dbSNP
rs202050374 4 dbSNP
rs367842831 5 dbSNP
rs1223489976 6 dbSNP
rs907256096 9 dbSNP
rs753257137 14 dbSNP
rs757843554 17 dbSNP
rs371369162 18 dbSNP
Putative Targets

Gene Information
Gene Symbol CAPRIN1   
Synonyms GPIAP1, GPIP137, GRIP137, M11S1, RNG105, p137GPI
Description cell cycle associated protein 1
Transcript NM_005898   
Other Transcripts NM_203364   
Expression
Putative miRNA Targets on CAPRIN1
3'UTR of CAPRIN1
(miRNA target sites are highlighted)
>CAPRIN1|NM_005898|3'UTR
   1 TCTGATTCACAGGATTATGTTTAATCGCCAAAAACACACTGGCCAGTGTACCATAATATGTTACCAGAAGAGTTATTATC
  81 TATTTGTTCTCCCTTTCAGGAAACTTATTGTAAAGGGACTGTTTTCATCCCATAAAGACAGGACTACAATTGTCAGCTTT
 161 CTATTACCTGGATATGGAAGGAAACTATTTTTACTCTGCATGTTCTGTCCTAAGCGTCATCTTGAGCCTTGCACATGATA
 241 CTCAGATTCCTCACCCTTGCTTAGGAGTAAAACAATATACTTTACAGGGTGATAATAATCTCCATAGTTATTTGAAGTGG
 321 CTTGAAAAAGGCAAGATTGACTTTTATGACATTGGATAAAATCTACAAATCAGCCCTCGAGTTATTCAATGATAACTGAC
 401 AAACTAAATTATTTCCCTAGAAAGGAAGATGAAAGGAGTGGAGTGTGGTTTGGCAGAACAACTGCATTTCACAGCTTTTC
 481 CAGTTAAATTGGAGCACTGAACGTTCAGATGCATACCAAATTATGCATGGGTCCTAATCACACATATAAGGCTGGCTACC
 561 AGCTTTGACACAGCACTGTTCATCTGGCCAAACAACTGTGGTTAAAAACACATGTAAAATGCTTTTTAACAGCTGATACT
 641 GTATAAGACAAAGCCAAGATGCAAAATTAGGCTTTGATTGGCACTTTTTGAAAAATATGCAACAAATATGGGATGTAATC
 721 CGGATGGCCGCTTCTGTACTTAATGTGAAATATTTAGATACCTTTTTGAACACTTAACAGTTTCTTTGAGACAATGACTT
 801 TTGTAAGGATTGGTACTATCTATCATTCCTTATGACATGTACATTGTCTGTCACTAATCCTTGGATTTTGCTGTATTGTC
 881 ACCTAAATTGGTACAGGTACTGATGAAAATCTCTAGTGGATAATCATAACACTCTCGGTCACATGTTTTTCCTTCAGCTT
 961 GAAAGCTTTTTTTTAAAAGGAAAAGATACCAAATGCCTGCTGCTACCACCCTTTTCAATTGCTATCTTTTGAAAGGCACC
1041 AGTATGTGTTTTAGATTGATTTCCCTGTTTCAGGGAAATCACGGACAGTAGTTTCAGTTCTGATGGTATAAGCAAAACAA
1121 ATAAAACGTTTATAAAAGTTGTATCTTGAAACACTGGTGTTCAACAGCTAGCAGCTTATGTGATTCACCCCATGCCACGT
1201 TAGTGTCACAAATTTTATGGTTTATCTCCAGCAACATTTCTCTAGTACTTGCACTTATTATCTTTTGTCTAATTTAACCT
1281 TAACTGAATTCTCCGTTTCTCCTGGAGGCATTTATATTCAGTGATAATTCCTTCCCTTAGATGCATAGGGAGAGTCTCTA
1361 AATTTGATGGAAATGGACACTTGAGTAGTGACTTAGCCTTATGTACTCTGTTGGAATTTGTGCTAGCAGTTTGAGCACTA
1441 GTTCTGTGTGCCTAGGAAGTTAATGCTGCTTATTGTCTCATTCTGACTTCATGGAGAATTAATCCCACCTTTAAGCAAAG
1521 GCTACTAAGTTAATGGTATTTTCTGTGCAGAAATTAAATTTTATTTTCAGCATTTAGCCCAGGAATTCTTCCAGTAGGTG
1601 CTCAGCTATTTAAAAACAAAACTATTCTCAAACATTCATCATTAGACAACTGGAGTTTTTGCTGGTTTTGTAACCTACCA
1681 AAATGGATAGGCTGTTGAACATTCCACATTCAAAAGTTTTGTAGGGTGGTGGGAAATGGGGGATCTTCAATGTTTATTTT
1761 AAAATAAAATAAAATAAGTTCTTGACTTTTCTCATGTGTGGTTGTGGTACATCATATTGGAAGGGTTAACCTGTTACTTT
1841 GGCAAATGAGTATTTTTTTGCTAGCACCTCCCCTTGCGTGCTTTAAATGACATCTGCCTGGGATGTACCACAACCATATG
1921 TTACCTGTATCTTAGGGGAATGGATAAAATATTTGTGGTTTACTGGGTAATCCCTAGATGATGTATGCTTGCAGTCCTAT
2001 ATAAAACTAAATTTGCTATCTGTGTAGAAAATAATTTCATGACATTTACAATCAGGACTGAAGTAAGTTCTTCACACAGT
2081 GACCTCTGAATCAGTTTCAGAGAAGGGATGGGGGAGAAAATGCCTTCTAGGTTTTGAACTTCTATGCATTAGTGCAGATG
2161 TTGTGAATGTGTAAAGGTGTTCATAGTTTGACTGTTTCTATGTATGTTTTTTCAAAGAATTGTTCCTTTTTTTGAACTAT
2241 AATTTTTCTTTTTTTGGTTATTTTACCATCACAGTTTAAATGTATATCTTTTATGTCTCTACTCAGACCATATTTTTAAA
2321 GGGGTGCCTCATTATGGGGCAGAGAACTTTTCAATAAGTCTCATTAAGATCTGAATCTTGGTTCTAAGCATTCTGTATAA
2401 TATGTGATTGCTTGTCCTAGCTGCAGAAGGCCTTTTGTTTGGTCAAATGCATATTTTAGCAGAGTTTCAAGGAAATGATT
2481 GTCACACATGTCACTGTAGCCTCTTGGTGTAGCAAGCTCACATACAAAATACTTTTGTATATGCATAATATAAATCATCT
2561 CATGTGGATATGAAACTTCTTTTTTAAAACTTAAAAAGGTAGAATGTTATTGATTACCTTGATTAGGGCAGTTTTATTTC
2641 CAGATCCTAATAATTCCTAAAAAATATGGAAAAGTTTTTTTTCAATCATTGTACCTTGATATTAAAACAAATATCCTTTA
2721 AGTATTTCTAATCAGTTAGCTTCTACAGTTCTTTTGTCTCCTTTTATATGCAGCTCTTACGTGGGAGACTTTTCCACTTA
2801 AAGGAGACATAGAATGTGTGCTTATTCTCAGAAGGTTCATTAACTGAGGTGATGAGTTAACAACTAGTTGAGCAGTCAGC
2881 TTCCTAAGTGTTTTAGGACATTTGTTCATTATATTTTCCGTCATATAACTAGAGGAAGTGGAATGCAGATAAGTGCCGAA
2961 TTCAAACCCTTCATTTTATGTTTAAGCTCCTGAATCTGCATTCCACTTGGGTTGTTTTTAAGCATTCTAAATTTTAGTTG
3041 ATTATAAGTTAGATTTCACAGAATCAGTATTGCCCTTGATCTTGTCCTTTTTATGGAGTTAACGGGGAGGAAGACCCCTC
3121 AGGAAAACGAAAGTAAATTGTTAAGGCTCATCTTCATACCTTTTTCCATTTTGAATCCTACAAAAATACTGCAAAAGACT
3201 AGTGAATGTTTAAAATTACACTAGATTAAATAATATGAAAGTC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaucACCCAUUUCUCCCUCUc 5'
              | | |: | ||||||| 
Target 5' ccctTAGATGCATAGGGAGAg 3'
1334 - 1354 149.00 -13.90
2
miRNA  3' gaUCACCCAUUUCUCCCUCUc 5'
            ||  || :| |:|||||| 
Target 5' agAGAAGG-GATGGGGGAGAa 3'
2099 - 2118 138.00 -16.50
3
miRNA  3' gaucACC-CAUUUCUCCCUCUc 5'
              ||| || || :|||||: 
Target 5' tttaTGGAGTTAACGGGGAGGa 3'
3090 - 3111 129.00 -14.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30473409 27 COSMIC
COSN30528727 87 COSMIC
COSN30103667 92 COSMIC
COSN32062661 98 COSMIC
COSN30456370 103 COSMIC
COSN31599464 118 COSMIC
COSN31558623 182 COSMIC
COSN30120460 204 COSMIC
COSN24303838 277 COSMIC
COSN1529680 296 COSMIC
COSN15755419 547 COSMIC
COSN5795205 596 COSMIC
COSN31527950 620 COSMIC
COSN28202063 844 COSMIC
COSN29229666 870 COSMIC
COSN30426197 1349 COSMIC
COSN31529076 1363 COSMIC
COSN26576081 1414 COSMIC
COSN28897002 1437 COSMIC
COSN5907889 1450 COSMIC
COSN30177205 1569 COSMIC
COSN15709951 1772 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs746096055 6 dbSNP
rs1054879366 7 dbSNP
rs755558777 8 dbSNP
rs895005767 13 dbSNP
rs1159136176 16 dbSNP
rs780786162 18 dbSNP
rs1027709539 19 dbSNP
rs747694951 22 dbSNP
rs756207402 26 dbSNP
rs886540036 27 dbSNP
rs1190518310 28 dbSNP
rs1369356325 35 dbSNP
rs1167647005 36 dbSNP
rs1472771278 42 dbSNP
rs1004852783 46 dbSNP
rs1473335254 58 dbSNP
rs1369829406 59 dbSNP
rs1019398304 60 dbSNP
rs375220671 61 dbSNP
rs966280974 63 dbSNP
rs975016585 65 dbSNP
rs947896641 73 dbSNP
rs1485044721 77 dbSNP
rs1029154237 83 dbSNP
rs957499794 90 dbSNP
rs1206719186 103 dbSNP
rs1482003919 106 dbSNP
rs536545376 109 dbSNP
rs1228670574 118 dbSNP
rs1358274248 121 dbSNP
rs191894780 125 dbSNP
rs1242935758 130 dbSNP
rs914959473 133 dbSNP
rs555176882 139 dbSNP
rs977776060 143 dbSNP
rs906449703 149 dbSNP
rs575973278 150 dbSNP
rs1296496390 151 dbSNP
rs771230403 154 dbSNP
rs1161060498 155 dbSNP
rs892531711 160 dbSNP
rs1283887833 164 dbSNP
rs538268171 169 dbSNP
rs895079479 184 dbSNP
rs1222279903 186 dbSNP
rs1221479041 189 dbSNP
rs1453085469 192 dbSNP
rs1287423907 193 dbSNP
rs1212865164 197 dbSNP
rs1334371907 201 dbSNP
rs1277727783 203 dbSNP
rs930468917 211 dbSNP
rs1438042757 215 dbSNP
rs1206241211 216 dbSNP
rs975556275 217 dbSNP
rs1437853213 228 dbSNP
rs1482459350 235 dbSNP
rs1049370602 236 dbSNP
rs558594668 245 dbSNP
rs1005418421 246 dbSNP
rs907589566 251 dbSNP
rs1321932492 255 dbSNP
rs1461260809 268 dbSNP
rs145563168 276 dbSNP
rs182538694 279 dbSNP
rs1455167720 282 dbSNP
rs1406661572 286 dbSNP
rs996195126 293 dbSNP
rs765279390 295 dbSNP
rs973150018 306 dbSNP
rs765788364 311 dbSNP
rs1353972758 312 dbSNP
rs868783857 318 dbSNP
rs940534292 325 dbSNP
rs561139192 326 dbSNP
rs1037509773 331 dbSNP
rs1303630811 335 dbSNP
rs773228659 339 dbSNP
rs1347308939 342 dbSNP
rs1020904242 345 dbSNP
rs1283603114 346 dbSNP
rs966481957 347 dbSNP
rs978266987 348 dbSNP
rs1219912167 359 dbSNP
rs1347685757 365 dbSNP
rs947829166 369 dbSNP
rs1274005489 375 dbSNP
rs1432388509 376 dbSNP
rs1344260162 377 dbSNP
rs534481064 379 dbSNP
rs960334055 386 dbSNP
rs574739461 390 dbSNP
rs916459044 409 dbSNP
rs1449826665 411 dbSNP
rs939276062 418 dbSNP
rs1249707720 419 dbSNP
rs1186480417 430 dbSNP
rs61880386 436 dbSNP
rs563672893 439 dbSNP
rs368694695 445 dbSNP
rs1210826522 455 dbSNP
rs368964713 456 dbSNP
rs532504128 457 dbSNP
rs1222563606 461 dbSNP
rs1278785833 463 dbSNP
rs930591110 467 dbSNP
rs1048883953 469 dbSNP
rs1270490491 473 dbSNP
rs1489992910 483 dbSNP
rs1343537012 484 dbSNP
rs1300209566 488 dbSNP
rs1213191827 494 dbSNP
rs552291734 497 dbSNP
rs1198841662 503 dbSNP
rs761719703 504 dbSNP
rs767548151 505 dbSNP
rs1356983693 507 dbSNP
rs1312170501 509 dbSNP
rs1430290386 511 dbSNP
rs762333006 517 dbSNP
rs1166422811 521 dbSNP
rs940773722 525 dbSNP
rs1427710364 527 dbSNP
rs1419069109 533 dbSNP
rs1022344216 540 dbSNP
rs1484259293 544 dbSNP
rs1040454831 545 dbSNP
rs1210284339 546 dbSNP
rs1483633386 547 dbSNP
rs114947458 548 dbSNP
rs996963052 549 dbSNP
rs141360049 550 dbSNP
rs1363835550 559 dbSNP
rs1312954908 560 dbSNP
rs1229720098 563 dbSNP
rs1353216032 569 dbSNP
rs955603368 572 dbSNP
rs1422613233 574 dbSNP
rs1372260940 577 dbSNP
rs1296449822 580 dbSNP
rs1322847355 602 dbSNP
rs1326735707 604 dbSNP
rs1050427371 610 dbSNP
rs76454700 613 dbSNP
rs1425729033 614 dbSNP
rs559005721 617 dbSNP
rs761367805 622 dbSNP
rs1415971994 624 dbSNP
rs1363999869 628 dbSNP
rs189744866 631 dbSNP
rs769205217 634 dbSNP
rs1230259668 637 dbSNP
rs1194633364 641 dbSNP
rs1480495755 645 dbSNP
rs961703340 649 dbSNP
rs1266365476 655 dbSNP
rs973483041 658 dbSNP
rs1293298738 662 dbSNP
rs920353440 663 dbSNP
rs1272157154 669 dbSNP
rs1228469466 674 dbSNP
rs1351863833 679 dbSNP
rs1304756652 680 dbSNP
rs1390709245 682 dbSNP
rs1020431738 696 dbSNP
rs182204264 698 dbSNP
rs1459681133 699 dbSNP
rs1392546713 701 dbSNP
rs550063339 704 dbSNP
rs1164550232 708 dbSNP
rs1457812538 709 dbSNP
rs569876318 710 dbSNP
rs538584419 711 dbSNP
rs145287074 722 dbSNP
rs939185802 723 dbSNP
rs1467468554 727 dbSNP
rs1251975759 730 dbSNP
rs960445903 731 dbSNP
rs1449042867 734 dbSNP
rs1191472140 740 dbSNP
rs572050111 744 dbSNP
rs1247867964 751 dbSNP
rs1258382247 754 dbSNP
rs1237720132 755 dbSNP
rs913815328 757 dbSNP
rs990411690 759 dbSNP
rs946736270 761 dbSNP
rs1185680492 763 dbSNP
rs534410812 773 dbSNP
rs1436041910 776 dbSNP
rs1387449749 777 dbSNP
rs916287363 779 dbSNP
rs114425809 780 dbSNP
rs1162522936 781 dbSNP
rs574676795 791 dbSNP
rs1385559664 794 dbSNP
rs75292625 795 dbSNP
rs899914880 803 dbSNP
rs996910642 804 dbSNP
rs1258355367 814 dbSNP
rs113052175 816 dbSNP
rs1259236974 816 dbSNP
rs151202936 816 dbSNP
rs552033793 816 dbSNP
rs71644540 816 dbSNP
rs1387691300 818 dbSNP
rs1257665040 821 dbSNP
rs1232036472 822 dbSNP
rs34013993 822 dbSNP
rs985140939 823 dbSNP
rs907799247 824 dbSNP
rs5790976 825 dbSNP
rs1298003177 832 dbSNP
rs1316759796 834 dbSNP
rs1328358603 838 dbSNP
rs940497820 844 dbSNP
rs752814868 845 dbSNP
rs1403064553 846 dbSNP
rs1051145963 847 dbSNP
rs1433347297 860 dbSNP
rs866493356 867 dbSNP
rs1395022495 869 dbSNP
rs767947125 871 dbSNP
rs1476631059 874 dbSNP
rs1353466767 876 dbSNP
rs1203936508 879 dbSNP
rs1040236544 890 dbSNP
rs1423855209 895 dbSNP
rs891268603 897 dbSNP
rs1004348073 910 dbSNP
rs1485273579 910 dbSNP
rs1275272376 911 dbSNP
rs1015809654 919 dbSNP
rs923319131 926 dbSNP
rs1268618121 932 dbSNP
rs932090641 933 dbSNP
rs1205734545 934 dbSNP
rs1295140824 935 dbSNP
rs557584886 937 dbSNP
rs544622286 938 dbSNP
rs980493194 940 dbSNP
rs1394829090 943 dbSNP
rs1167725103 944 dbSNP
rs1423514669 951 dbSNP
rs147631806 953 dbSNP
rs1042331397 959 dbSNP
rs547734992 967 dbSNP
rs1183965871 974 dbSNP
rs903453074 975 dbSNP
rs1271974434 976 dbSNP
rs1210226626 980 dbSNP
rs1357239047 988 dbSNP
rs1275355334 989 dbSNP
rs1231513526 996 dbSNP
rs1002956964 999 dbSNP
rs1289486973 1001 dbSNP
rs1043713809 1012 dbSNP
rs1444937943 1012 dbSNP
rs188015956 1019 dbSNP
rs1035828372 1025 dbSNP
rs896238091 1037 dbSNP
rs932670101 1041 dbSNP
rs1460447366 1045 dbSNP
rs1156890546 1067 dbSNP
rs1410907812 1075 dbSNP
rs1159828455 1081 dbSNP
rs1011974566 1083 dbSNP
rs754637522 1084 dbSNP
rs1199299021 1089 dbSNP
rs1469694786 1113 dbSNP
rs1023288264 1114 dbSNP
rs951773450 1115 dbSNP
rs764315785 1119 dbSNP
rs575028176 1121 dbSNP
rs1004383491 1123 dbSNP
rs1037638658 1123 dbSNP
rs1395162889 1126 dbSNP
rs984494032 1128 dbSNP
rs1337067704 1129 dbSNP
rs996181724 1142 dbSNP
rs11032512 1144 dbSNP
rs142294812 1153 dbSNP
rs1225718219 1162 dbSNP
rs1001877317 1163 dbSNP
rs975908624 1164 dbSNP
rs1261729853 1170 dbSNP
rs1319640971 1171 dbSNP
rs560265618 1178 dbSNP
rs754360788 1180 dbSNP
rs1173138109 1184 dbSNP
rs923137414 1187 dbSNP
rs1196648286 1188 dbSNP
rs1455393932 1198 dbSNP
rs1192795878 1199 dbSNP
rs932033385 1199 dbSNP
rs987979684 1200 dbSNP
rs1468156059 1210 dbSNP
rs752250829 1210 dbSNP
rs758965193 1212 dbSNP
rs1445414014 1216 dbSNP
rs757294888 1217 dbSNP
rs1284159761 1218 dbSNP
rs947351093 1219 dbSNP
rs1350721171 1225 dbSNP
rs1179846473 1229 dbSNP
rs1301646736 1234 dbSNP
rs1234040283 1238 dbSNP
rs1365466700 1241 dbSNP
rs1290323651 1242 dbSNP
rs1041719967 1245 dbSNP
rs1344131229 1257 dbSNP
rs527508553 1259 dbSNP
rs1480758125 1260 dbSNP
rs1436449225 1261 dbSNP
rs1178318677 1262 dbSNP
rs903399910 1262 dbSNP
rs542325773 1263 dbSNP
rs1465213901 1266 dbSNP
rs1057211761 1267 dbSNP
rs912636705 1268 dbSNP
rs747452776 1270 dbSNP
rs940127182 1274 dbSNP
rs556661866 1279 dbSNP
rs575063258 1280 dbSNP
rs1241554245 1285 dbSNP
rs894676782 1286 dbSNP
rs1037181784 1295 dbSNP
rs1013053020 1296 dbSNP
rs898633958 1300 dbSNP
rs1023783322 1302 dbSNP
rs887539705 1303 dbSNP
rs931511848 1322 dbSNP
rs1306933624 1334 dbSNP
rs1044634546 1335 dbSNP
rs200651546 1337 dbSNP
rs377218505 1339 dbSNP
rs146518610 1340 dbSNP
rs867733996 1340 dbSNP
rs193091520 1345 dbSNP
rs1416091416 1346 dbSNP
rs1311993324 1356 dbSNP
rs1312263423 1359 dbSNP
rs546036803 1360 dbSNP
rs1253305861 1367 dbSNP
rs961955618 1370 dbSNP
rs1337467950 1374 dbSNP
rs1356107915 1389 dbSNP
rs1168098012 1399 dbSNP
rs529884094 1412 dbSNP
rs1408378070 1425 dbSNP
rs1419094004 1427 dbSNP
rs1188668235 1440 dbSNP
rs976018381 1445 dbSNP
rs550006215 1447 dbSNP
rs1204510971 1452 dbSNP
rs1030154524 1453 dbSNP
rs1481263567 1454 dbSNP
rs953161798 1455 dbSNP
rs2982590 1456 dbSNP
rs184055544 1457 dbSNP
rs947500650 1464 dbSNP
rs1273496737 1475 dbSNP
rs1020716400 1476 dbSNP
rs560779189 1486 dbSNP
rs1374418803 1496 dbSNP
rs746115010 1505 dbSNP
rs1391860915 1512 dbSNP
rs148089990 1521 dbSNP
rs1028195712 1522 dbSNP
rs770048479 1523 dbSNP
rs953999087 1523 dbSNP
rs1057288346 1524 dbSNP
rs916182688 1534 dbSNP
rs948852121 1538 dbSNP
rs1415715234 1545 dbSNP
rs1164326454 1554 dbSNP
rs1048565500 1556 dbSNP
rs887517857 1559 dbSNP
rs761124130 1563 dbSNP
rs1420138284 1573 dbSNP
rs564224779 1581 dbSNP
rs1253217563 1585 dbSNP
rs188208561 1599 dbSNP
rs1332268970 1602 dbSNP
rs1271934877 1604 dbSNP
rs1239155112 1615 dbSNP
rs1367265542 1634 dbSNP
rs878995277 1639 dbSNP
rs565517770 1643 dbSNP
rs1298268244 1644 dbSNP
rs1222971908 1660 dbSNP
rs1363285285 1679 dbSNP
rs1327704380 1701 dbSNP
rs1227996680 1702 dbSNP
rs1030228106 1705 dbSNP
rs1292942231 1712 dbSNP
rs1366042511 1713 dbSNP
rs534352437 1714 dbSNP
rs1007769982 1720 dbSNP
rs554210479 1721 dbSNP
rs920029712 1722 dbSNP
rs750607652 1727 dbSNP
rs1021493299 1737 dbSNP
rs1044623146 1738 dbSNP
rs1466817398 1744 dbSNP
rs1251997230 1750 dbSNP
rs1449141102 1751 dbSNP
rs969204271 1758 dbSNP
rs1486596092 1759 dbSNP
rs1258859793 1760 dbSNP
rs906101934 1760 dbSNP
rs977563062 1765 dbSNP
rs781102657 1775 dbSNP
rs1231809572 1779 dbSNP
rs1369042569 1785 dbSNP
rs1205498211 1794 dbSNP
rs1165748855 1795 dbSNP
rs1382829661 1797 dbSNP
rs1387290914 1807 dbSNP
rs924712497 1815 dbSNP
rs1287226721 1826 dbSNP
rs573087263 1831 dbSNP
rs960008210 1838 dbSNP
rs938940019 1843 dbSNP
rs992792323 1849 dbSNP
rs561049776 1853 dbSNP
rs916131753 1861 dbSNP
rs1385266988 1868 dbSNP
rs1429961429 1876 dbSNP
rs116805892 1878 dbSNP
rs1204049408 1879 dbSNP
rs1485917287 1881 dbSNP
rs1282466037 1882 dbSNP
rs775489069 1898 dbSNP
rs1346940516 1899 dbSNP
rs1049039252 1905 dbSNP
rs903642849 1919 dbSNP
rs531201531 1925 dbSNP
rs1293457360 1928 dbSNP
rs557263663 1934 dbSNP
rs549403853 1941 dbSNP
rs1290968412 1945 dbSNP
rs953944144 1961 dbSNP
rs897595384 1978 dbSNP
rs758595165 1979 dbSNP
rs1401891560 1981 dbSNP
rs577412193 1985 dbSNP
rs1463146476 1992 dbSNP
rs961640285 1994 dbSNP
rs1192291157 2000 dbSNP
rs972760681 2002 dbSNP
rs1385008131 2004 dbSNP
rs1185769206 2007 dbSNP
rs1051434932 2009 dbSNP
rs920002247 2014 dbSNP
rs952860097 2019 dbSNP
rs1312185418 2021 dbSNP
rs756109350 2027 dbSNP
rs140986595 2038 dbSNP
rs1216466632 2039 dbSNP
rs927421930 2048 dbSNP
rs1262216592 2061 dbSNP
rs1413421430 2061 dbSNP
rs1340411561 2062 dbSNP
rs938845308 2067 dbSNP
rs1393564271 2069 dbSNP
rs760642304 2072 dbSNP
rs913489899 2084 dbSNP
rs1461477492 2087 dbSNP
rs945035829 2089 dbSNP
rs192159279 2094 dbSNP
rs1243393265 2095 dbSNP
rs1472395142 2096 dbSNP
rs1233397025 2102 dbSNP
rs116974530 2103 dbSNP
rs1179607526 2110 dbSNP
rs1435924028 2110 dbSNP
rs1000591731 2112 dbSNP
rs1198300225 2124 dbSNP
rs1412501486 2128 dbSNP
rs999114561 2130 dbSNP
rs1275067053 2143 dbSNP
rs542262598 2144 dbSNP
rs183878322 2145 dbSNP
rs759179053 2157 dbSNP
rs531038545 2162 dbSNP
rs1457050046 2164 dbSNP
rs961357733 2175 dbSNP
rs1331138122 2177 dbSNP
rs1337867199 2178 dbSNP
rs1396244508 2184 dbSNP
rs1323233106 2185 dbSNP
rs1404315595 2187 dbSNP
rs994567040 2189 dbSNP
rs1160279610 2191 dbSNP
rs764932005 2192 dbSNP
rs567797147 2193 dbSNP
rs1302313388 2197 dbSNP
rs1027011572 2198 dbSNP
rs1224228013 2201 dbSNP
rs1255200635 2202 dbSNP
rs1219442802 2205 dbSNP
rs980155052 2207 dbSNP
rs1285534345 2220 dbSNP
rs1352182356 2221 dbSNP
rs927371058 2223 dbSNP
rs1290138813 2227 dbSNP
rs1235491449 2237 dbSNP
rs1372725134 2240 dbSNP
rs970699868 2241 dbSNP
rs780208991 2245 dbSNP
rs984416717 2248 dbSNP
rs960158433 2249 dbSNP
rs993036911 2249 dbSNP
rs1263606441 2257 dbSNP
rs1313560843 2258 dbSNP
rs1207648697 2261 dbSNP
rs1236333307 2266 dbSNP
rs910137134 2275 dbSNP
rs1174021771 2277 dbSNP
rs1480692512 2281 dbSNP
rs1179397605 2283 dbSNP
rs544759382 2285 dbSNP
rs972898378 2287 dbSNP
rs1189734580 2289 dbSNP
rs1477839568 2289 dbSNP
rs563336753 2294 dbSNP
rs752235928 2295 dbSNP
rs879333171 2305 dbSNP
rs1286012809 2308 dbSNP
rs781130550 2309 dbSNP
rs532365482 2310 dbSNP
rs1431962646 2311 dbSNP
rs936352469 2324 dbSNP
rs1212031838 2331 dbSNP
rs1412931232 2334 dbSNP
rs1350569465 2339 dbSNP
rs552173384 2345 dbSNP
rs76757174 2355 dbSNP
rs1271360296 2365 dbSNP
rs1428119128 2369 dbSNP
rs1355117689 2370 dbSNP
rs1339737080 2371 dbSNP
rs1313459662 2372 dbSNP
rs1436319884 2377 dbSNP
rs1373349037 2387 dbSNP
rs1444473456 2396 dbSNP
rs547201086 2400 dbSNP
rs1414065935 2403 dbSNP
rs1420501709 2404 dbSNP
rs752106119 2418 dbSNP
rs889534851 2424 dbSNP
rs888811057 2431 dbSNP
rs943870282 2433 dbSNP
rs1040917378 2441 dbSNP
rs1486960155 2447 dbSNP
rs1236040380 2449 dbSNP
rs10436 2453 dbSNP
rs1409183504 2457 dbSNP
rs757725355 2459 dbSNP
rs897049632 2477 dbSNP
rs994076419 2480 dbSNP
rs1472261138 2496 dbSNP
rs1346889568 2501 dbSNP
rs1217076100 2502 dbSNP
rs1316798464 2504 dbSNP
rs1027329661 2505 dbSNP
rs1416488791 2507 dbSNP
rs888415198 2509 dbSNP
rs1301977259 2514 dbSNP
rs528049951 2516 dbSNP
rs1277485701 2518 dbSNP
rs1034433101 2521 dbSNP
rs1042955832 2524 dbSNP
rs904442413 2532 dbSNP
rs1172876050 2533 dbSNP
rs1464105623 2537 dbSNP
rs1422964172 2543 dbSNP
rs960147044 2545 dbSNP
rs993394458 2546 dbSNP
rs1412346802 2551 dbSNP
rs998667054 2557 dbSNP
rs1181622030 2560 dbSNP
rs573873017 2562 dbSNP
rs1234225606 2568 dbSNP
rs1196321603 2571 dbSNP
rs1031501716 2573 dbSNP
rs1271909060 2576 dbSNP
rs967966782 2579 dbSNP
rs1234601367 2580 dbSNP
rs1483002401 2581 dbSNP
rs979005142 2582 dbSNP
rs1311994144 2583 dbSNP
rs1224108980 2584 dbSNP
rs1200807704 2591 dbSNP
rs1271442964 2593 dbSNP
rs1375314464 2593 dbSNP
rs895904139 2596 dbSNP
rs926214138 2597 dbSNP
rs1399857575 2606 dbSNP
rs1326655799 2609 dbSNP
rs772622010 2611 dbSNP
rs547790621 2620 dbSNP
rs1022910678 2625 dbSNP
rs1164736291 2628 dbSNP
rs1420480231 2629 dbSNP
rs1410558062 2630 dbSNP
rs567757938 2635 dbSNP
rs746228004 2648 dbSNP
rs769993859 2651 dbSNP
rs1411932824 2657 dbSNP
rs936300069 2658 dbSNP
rs780325369 2659 dbSNP
rs910962441 2668 dbSNP
rs943819298 2674 dbSNP
rs1370086690 2675 dbSNP
rs1239239221 2691 dbSNP
rs536744697 2692 dbSNP
rs1304504088 2693 dbSNP
rs970053407 2694 dbSNP
rs1388619883 2704 dbSNP
rs896958955 2704 dbSNP
rs1303721042 2706 dbSNP
rs984544191 2707 dbSNP
rs929807652 2708 dbSNP
rs1017145824 2713 dbSNP
rs961936577 2715 dbSNP
rs972887225 2718 dbSNP
rs922804182 2721 dbSNP
rs1395287942 2722 dbSNP
rs1195154688 2729 dbSNP
rs150232328 2731 dbSNP
rs895886829 2732 dbSNP
rs138879847 2734 dbSNP
rs749480789 2740 dbSNP
rs142181293 2746 dbSNP
rs1215595945 2747 dbSNP
rs188462784 2748 dbSNP
rs910312217 2749 dbSNP
rs535811008 2752 dbSNP
rs1043124382 2754 dbSNP
rs979339913 2756 dbSNP
rs904433846 2760 dbSNP
rs1300594572 2762 dbSNP
rs1382912489 2763 dbSNP
rs1342927783 2765 dbSNP
rs1296941379 2766 dbSNP
rs1340876631 2770 dbSNP
rs934620203 2774 dbSNP
rs1223783491 2777 dbSNP
rs1292654694 2779 dbSNP
rs1033220792 2781 dbSNP
rs774550958 2782 dbSNP
rs191828416 2786 dbSNP
rs985078268 2789 dbSNP
rs1260890368 2790 dbSNP
rs1192796834 2794 dbSNP
rs1221292870 2798 dbSNP
rs910911569 2801 dbSNP
rs1343130779 2802 dbSNP
rs895684282 2816 dbSNP
rs1243098952 2819 dbSNP
rs1228220757 2823 dbSNP
rs943716668 2826 dbSNP
rs1218514589 2831 dbSNP
rs1014053432 2833 dbSNP
rs976495578 2839 dbSNP
rs1336485667 2843 dbSNP
rs114951072 2845 dbSNP
rs1401021856 2850 dbSNP
rs1389588941 2853 dbSNP
rs544359228 2865 dbSNP
rs1298429616 2866 dbSNP
rs75745430 2873 dbSNP
rs770677956 2888 dbSNP
rs905944044 2889 dbSNP
rs1169356739 2892 dbSNP
rs1475456179 2893 dbSNP
rs373249608 2894 dbSNP
rs16925167 2901 dbSNP
rs1017382349 2908 dbSNP
rs1255696236 2910 dbSNP
rs879296421 2911 dbSNP
rs1196564234 2912 dbSNP
rs909788815 2919 dbSNP
rs531060852 2920 dbSNP
rs770990471 2921 dbSNP
rs1336106587 2924 dbSNP
rs1286513427 2926 dbSNP
rs1243027016 2927 dbSNP
rs559176843 2930 dbSNP
rs1340200647 2932 dbSNP
rs528359391 2942 dbSNP
rs895789015 2946 dbSNP
rs60854277 2947 dbSNP
rs567804281 2950 dbSNP
rs1363748372 2957 dbSNP
rs370809214 2958 dbSNP
rs903304991 2959 dbSNP
rs1161434953 2965 dbSNP
rs1000360840 2966 dbSNP
rs530457229 2970 dbSNP
rs1285338708 2987 dbSNP
rs964853252 2991 dbSNP
rs1441709317 2995 dbSNP
rs1236653367 3011 dbSNP
rs531866141 3011 dbSNP
rs978449974 3013 dbSNP
rs925635692 3014 dbSNP
rs1208521677 3020 dbSNP
rs763630180 3030 dbSNP
rs373714701 3039 dbSNP
rs1461981444 3044 dbSNP
rs1052941413 3059 dbSNP
rs202172542 3062 dbSNP
rs1308141665 3067 dbSNP
rs1366843307 3069 dbSNP
rs949846008 3073 dbSNP
rs1321036386 3082 dbSNP
rs1404642399 3086 dbSNP
rs1385590610 3087 dbSNP
rs35063541 3088 dbSNP
rs1160234342 3097 dbSNP
rs1471741509 3098 dbSNP
rs1044626948 3104 dbSNP
rs1378661297 3107 dbSNP
rs1019163151 3108 dbSNP
rs905937956 3108 dbSNP
rs1478489917 3119 dbSNP
rs570547678 3121 dbSNP
rs1412346184 3129 dbSNP
rs1287432929 3130 dbSNP
rs78126719 3130 dbSNP
rs61880387 3134 dbSNP
rs1352015176 3138 dbSNP
rs1387445404 3141 dbSNP
rs775242807 3148 dbSNP
rs1346700870 3154 dbSNP
rs976864125 3158 dbSNP
rs918337388 3159 dbSNP
rs1452971138 3160 dbSNP
rs1398100324 3161 dbSNP
rs34277839 3161 dbSNP
rs1359601796 3166 dbSNP
rs1174041491 3167 dbSNP
rs951235604 3176 dbSNP
rs1427607283 3185 dbSNP
rs1335598383 3186 dbSNP
rs1170879071 3187 dbSNP
rs983939435 3189 dbSNP
rs1038353671 3192 dbSNP
rs897188891 3193 dbSNP
rs994183977 3202 dbSNP
rs535285160 3205 dbSNP
rs559160957 3208 dbSNP
rs1029881477 3211 dbSNP
rs1338219104 3222 dbSNP
rs1487607169 3232 dbSNP
rs909695481 3237 dbSNP
rs937168741 3239 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gaucacccauUUCUCCCUCUc 5'
                    :| ||||||| 
Target 5' ----------GAAAGGGAGAg 3'
1 - 11
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000341394.4 | 3UTR | GAAAGGGAGAGAAGAACAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
203 hsa-miR-6867-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT078229 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT107799 SLC1A1 solute carrier family 1 member 1 2 2
MIRT115808 CAPN15 calpain 15 2 2
MIRT137570 RCOR1 REST corepressor 1 2 2
MIRT161372 MBNL1 muscleblind like splicing regulator 1 2 2
MIRT320477 HOXA10 homeobox A10 2 2
MIRT444449 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT461305 MRPS27 mitochondrial ribosomal protein S27 2 6
MIRT470306 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT471679 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT475546 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT480901 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT489368 RAB11B RAB11B, member RAS oncogene family 2 2
MIRT489557 PLD6 phospholipase D family member 6 2 2
MIRT494969 TMEM233 transmembrane protein 233 2 2
MIRT496634 SLC46A1 solute carrier family 46 member 1 2 2
MIRT500259 ZNF788 zinc finger family member 788 2 6
MIRT500272 ZNF781 zinc finger protein 781 2 8
MIRT500328 ZNF487P zinc finger protein 487 1 3
MIRT504012 ACSL6 acyl-CoA synthetase long chain family member 6 2 2
MIRT504830 EREG epiregulin 2 2
MIRT513588 DCTN6 dynactin subunit 6 2 2
MIRT520896 STMN1 stathmin 1 2 2
MIRT525275 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT526166 ANKRD65 ankyrin repeat domain 65 2 2
MIRT526582 CCDC43 coiled-coil domain containing 43 2 2
MIRT527812 TMEM74B transmembrane protein 74B 2 2
MIRT528141 LRRC38 leucine rich repeat containing 38 2 2
MIRT529903 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531980 SLCO1B3 solute carrier organic anion transporter family member 1B3 2 2
MIRT532251 TBPL2 TATA-box binding protein like 2 2 2
MIRT534300 SKIDA1 SKI/DACH domain containing 1 2 2
MIRT534879 QKI QKI, KH domain containing RNA binding 2 2
MIRT538305 CSNK2A1 casein kinase 2 alpha 1 2 2
MIRT539385 ADRB1 adrenoceptor beta 1 2 2
MIRT541304 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT543960 RNF20 ring finger protein 20 2 2
MIRT544380 ZNF266 zinc finger protein 266 2 2
MIRT544451 KRBOX4 KRAB box domain containing 4 2 2
MIRT545783 ZNF791 zinc finger protein 791 2 4
MIRT548156 FRAT2 FRAT2, WNT signaling pathway regulator 2 2
MIRT556660 KMT2D lysine methyltransferase 2D 2 4
MIRT557715 GABARAPL1 GABA type A receptor associated protein like 1 2 2
MIRT562701 ZNF415 zinc finger protein 415 2 2
MIRT563050 ZNF138 zinc finger protein 138 2 2
MIRT564307 CCNT1 cyclin T1 2 2
MIRT568333 BACH1 BTB domain and CNC homolog 1 2 2
MIRT570864 ZNF525 zinc finger protein 525 2 2
MIRT570874 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571516 ZNF625 zinc finger protein 625 2 2
MIRT572470 MTMR10 myotubularin related protein 10 2 2
MIRT572898 RUNDC3B RUN domain containing 3B 2 2
MIRT573084 APLN apelin 2 2
MIRT575251 Timp3 tissue inhibitor of metalloproteinase 3 2 2
MIRT575275 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 2 2
MIRT607230 LINS lines homolog 1 2 4
MIRT611803 FCRL4 Fc receptor like 4 2 2
MIRT612669 POU2F1 POU class 2 homeobox 1 2 4
MIRT612739 MYOCD myocardin 2 2
MIRT613409 CDH8 cadherin 8 2 4
MIRT614007 PAOX polyamine oxidase 2 2
MIRT615188 CLUAP1 clusterin associated protein 1 2 2
MIRT616497 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT616524 URM1 ubiquitin related modifier 1 2 2
MIRT617066 SPIB Spi-B transcription factor 2 2
MIRT617813 EMX2 empty spiracles homeobox 2 2 2
MIRT619291 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619375 KLHL12 kelch like family member 12 2 2
MIRT619499 TXLNB taxilin beta 2 2
MIRT619601 MKKS McKusick-Kaufman syndrome 2 2
MIRT619754 MYO1F myosin IF 2 2
MIRT619976 ZSCAN22 zinc finger and SCAN domain containing 22 2 2
MIRT620743 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT620871 KCTD7 potassium channel tetramerization domain containing 7 2 2
MIRT621380 CLNK cytokine dependent hematopoietic cell linker 2 2
MIRT621511 ZNF638 zinc finger protein 638 2 2
MIRT621537 ZNF500 zinc finger protein 500 2 2
MIRT621772 TMEM87B transmembrane protein 87B 2 2
MIRT622193 SLC5A12 solute carrier family 5 member 12 2 2
MIRT622319 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT622738 PITPNM3 PITPNM family member 3 2 2
MIRT622996 ONECUT3 one cut homeobox 3 2 2
MIRT625301 SHISA6 shisa family member 6 2 2
MIRT625637 KCNQ3 potassium voltage-gated channel subfamily Q member 3 2 2
MIRT627698 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT627751 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT628438 ANTXR2 anthrax toxin receptor 2 2 2
MIRT635440 SLC25A44 solute carrier family 25 member 44 2 2
MIRT637166 TMEM50A transmembrane protein 50A 2 2
MIRT638207 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT639288 TFAP2A transcription factor AP-2 alpha 2 4
MIRT639398 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT641230 SEMA3E semaphorin 3E 2 2
MIRT641501 STC2 stanniocalcin 2 2 2
MIRT642577 PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 2 2
MIRT642735 TDRD6 tudor domain containing 6 2 2
MIRT644001 PPP1R3G protein phosphatase 1 regulatory subunit 3G 2 2
MIRT644210 CBS cystathionine-beta-synthase 2 2
MIRT645405 FAM110A family with sequence similarity 110 member A 2 2
MIRT645685 TBC1D13 TBC1 domain family member 13 2 2
MIRT645699 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT645761 SURF6 surfeit 6 2 2
MIRT645826 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT645914 PLXNA3 plexin A3 2 2
MIRT646167 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646634 COA4 cytochrome c oxidase assembly factor 4 homolog 2 2
MIRT647547 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT648262 ZNF582 zinc finger protein 582 2 2
MIRT648385 ZNF22 zinc finger protein 22 2 2
MIRT648629 LEMD2 LEM domain containing 2 2 2
MIRT649353 SLC27A2 solute carrier family 27 member 2 2 2
MIRT649395 SH2D4A SH2 domain containing 4A 2 2
MIRT650241 CD68 CD68 molecule 2 2
MIRT650379 PTGIS prostaglandin I2 synthase 2 2
MIRT650705 KRT32 keratin 32 2 2
MIRT650854 UNC13D unc-13 homolog D 2 2
MIRT651042 ZNF644 zinc finger protein 644 2 2
MIRT651102 ZNF48 zinc finger protein 48 2 2
MIRT651130 ZNF398 zinc finger protein 398 2 2
MIRT652089 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT652200 TRIM33 tripartite motif containing 33 2 2
MIRT652422 TMEM239 transmembrane protein 239 2 2
MIRT652755 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT653201 SP9 Sp9 transcription factor 2 2
MIRT653338 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653715 SLC25A32 solute carrier family 25 member 32 2 2
MIRT654456 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT654499 RABIF RAB interacting factor 2 2
MIRT654678 PSMB5 proteasome subunit beta 5 2 2
MIRT655162 PHF20L1 PHD finger protein 20 like 1 2 2
MIRT655540 PADI2 peptidyl arginine deiminase 2 2 4
MIRT655850 NFE2L1 nuclear factor, erythroid 2 like 1 2 2
MIRT656248 MEX3A mex-3 RNA binding family member A 2 2
MIRT656581 LSAMP limbic system-associated membrane protein 2 2
MIRT657597 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT657824 GJD3 gap junction protein delta 3 2 2
MIRT658466 FAM102B family with sequence similarity 102 member B 2 2
MIRT659083 DENR density regulated re-initiation and release factor 2 2
MIRT659196 CYBB cytochrome b-245 beta chain 2 2
MIRT659558 CGGBP1 CGG triplet repeat binding protein 1 2 2
MIRT659860 CAPRIN1 cell cycle associated protein 1 2 2
MIRT660172 BNC2 basonuclin 2 2 2
MIRT660626 ANKRD52 ankyrin repeat domain 52 2 2
MIRT660917 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT660979 ABHD2 abhydrolase domain containing 2 2 2
MIRT661564 EPHX2 epoxide hydrolase 2 2 2
MIRT662214 CCRL2 C-C motif chemokine receptor like 2 2 2
MIRT662246 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT662560 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT662591 MAGEB4 MAGE family member B4 2 2
MIRT663294 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT663437 FBXO2 F-box protein 2 2 2
MIRT663811 RNF128 ring finger protein 128, E3 ubiquitin protein ligase 2 2
MIRT663821 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT665959 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT666115 SRRM4 serine/arginine repetitive matrix 4 2 2
MIRT667448 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT669330 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT669409 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669641 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT672663 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT673266 RUNDC1 RUN domain containing 1 2 2
MIRT676995 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT679290 SSBP2 single stranded DNA binding protein 2 2 2
MIRT687508 NCKAP1 NCK associated protein 1 2 2
MIRT698932 SPATA2 spermatogenesis associated 2 2 2
MIRT700852 PERP PERP, TP53 apoptosis effector 2 2
MIRT702426 KIAA1958 KIAA1958 2 2
MIRT703939 EPB41L1 erythrocyte membrane protein band 4.1 like 1 2 2
MIRT708962 SLC12A3 solute carrier family 12 member 3 2 2
MIRT709742 UBD ubiquitin D 2 2
MIRT709946 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT711121 CYYR1 cysteine and tyrosine rich 1 2 2
MIRT711217 RETSAT retinol saturase 2 2
MIRT711576 ASPA aspartoacylase 2 2
MIRT711599 LHX5 LIM homeobox 5 2 2
MIRT712232 RCC2 regulator of chromosome condensation 2 2 2
MIRT713317 TMEM44 transmembrane protein 44 2 2
MIRT713510 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT713543 GJB1 gap junction protein beta 1 2 2
MIRT713621 MED8 mediator complex subunit 8 2 2
MIRT714988 TSPAN11 tetraspanin 11 2 2
MIRT715449 PTCD1 pentatricopeptide repeat domain 1 2 2
MIRT715575 ATP5J2-PTCD1 ATP5J2-PTCD1 readthrough 2 2
MIRT715771 DDX42 DEAD-box helicase 42 2 2
MIRT715887 GNG2 G protein subunit gamma 2 2 2
MIRT716091 HARS histidyl-tRNA synthetase 2 2
MIRT717403 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT717965 PXMP4 peroxisomal membrane protein 4 2 2
MIRT718324 METTL7A methyltransferase like 7A 2 2
MIRT718628 DIP2A disco interacting protein 2 homolog A 2 2
MIRT719213 CAMK4 calcium/calmodulin dependent protein kinase IV 2 2
MIRT719234 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719817 LRRC4 leucine rich repeat containing 4 2 2
MIRT719978 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720480 TMEM178B transmembrane protein 178B 2 2
MIRT720713 RAPGEF6 Rap guanine nucleotide exchange factor 6 2 2
MIRT721006 ZNF619 zinc finger protein 619 2 2
MIRT721741 SDK2 sidekick cell adhesion molecule 2 2 2
MIRT723547 ZDHHC22 zinc finger DHHC-type containing 22 2 2
MIRT723596 FKRP fukutin related protein 2 2
MIRT723746 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT724784 C1D C1D nuclear receptor corepressor 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6867-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)

Error report submission