pre-miRNA Information
pre-miRNA hsa-mir-23a   
Genomic Coordinates chr19: 13836587 - 13836659
Synonyms MIRN23A, hsa-mir-23a, miRNA23A, MIR23A
Description Homo sapiens miR-23a stem-loop
Comment This miRNA was previously named miR-23 . This finding was later retracted after the discovery that the regulated gene was human homolog of ES1 (HES1), whose function is unknown.
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-23a-5p
Sequence 9| GGGGUUCCUGGGGAUGGGAUUU |30
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs748509260 12 dbSNP
rs1205403719 17 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ANKS4B   
Synonyms HARP
Description ankyrin repeat and sterile alpha motif domain containing 4B
Transcript NM_145865   
Expression
Putative miRNA Targets on ANKS4B
3'UTR of ANKS4B
(miRNA target sites are highlighted)
>ANKS4B|NM_145865|3'UTR
   1 TGGAGAGTTTTGGCCTGGAGCATTGGGGTGATGCTGTGGCCCGCTGGCAGCACTCCAGGCGGCACCCCCTCTTTACCCAA
  81 TGCCAGACCACTGGGAATGGATTCTAGGGCATCGGAAATGCCTACCTGAGAGAGAGACCCAAACTTTACTCTGGGAGGTA
 161 GGCTATGCCCATCCAAATAAATCTCCATGAGAAACTTGAGGAGACTTCATAACAAGAATCTGGCATTTCTCTTCAGTTAT
 241 CTTATATGTACATATAATTGTTTTTGTGGTTGTTTTGTTTTGTTTTGTTTTGTTTTTTGGAGATGAAGGTCTCAGTCTCT
 321 TACCCAGGCTAGGGTGCAGTGGTATGATCATAGTTCACTGTATTCTCAACCTCCTGGGCTCAAATGATCTCCTCCCACCT
 401 CAGCCTCCCAAGTAGCTGAGACTACAGGTTCACACCCCCCACACCTGGCTTATTTTGTATGTTTTAGTAGAGGTGGGGTC
 481 TTGCCACATTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGCAATCCTCCCACCTCAGCCTCCTAAAGCACTGGGATTA
 561 CAGGTGTGAACCACCGTACCCAGCCTATCTTTTTGATACTTTTGAATAAAGAAAGGGTCATATGCATGACAGGAAAATGA
 641 AAGAAACTTCCTTTACTTTTCTATCTCTGGATTTAAAATTATAATCTCATCACATTATCCTGCTGCTTGCTTTCCGATCT
 721 GTGTAACCTGGGAATTCCAATTCTTTTTCTCTCCTGAGATCTATGACTTTGCCTAGTGGTAGAGACTAGAGTTCTTTCCT
 801 GGCCTGCGGCTTGATGCCCAACTTAAATGCATCTAACCCTTTAACAAATGTGTACATGTTTACAAGTAATGGAAATGCGT
 881 CTATAATACTCCTGCCTGAGAATAGAGACAGAGTGGTGGTGGGGAGAGTGAAGAAAGAGATAGAATACAGGTGGTACCTG
 961 TTGTGGACTGAATTGCGTCAAATTCATATGTTGGAGCTCTAACCCCTAATGTGACTGTAATTGGAAATAAGACCTTTAAA
1041 GAAGTGATTAAGGTTAAATGAAGTCATAAGAATGCAACCCTAATCCTGTAGGACTGGTGTCCTTTTTTTCCCTTTTTTTT
1121 TTTTTTTTTGAGATGGAGCCTTGCTCTGTCACTCATGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTGCAACCCCCGCC
1201 TCCCAGGTTCGAGCACTTTTCATGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGTGCACCACAACGCCTGGCTAAGT
1281 TTTTGTATTTTTAGTAGAGGCGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCTG
1361 CCTCGGCCTCCCAGAGTGCTGGGATTACAGGCATGAGCCACTGCACCTGGCCTAGGACTGGTGTCCTAAGAAGAGGAAGA
1441 GACACTTAGGTGGAAGGCACACAGAGAGGCCACGTGAGGACACAGTGAGAAGGTGGCCGTCTGCAAGCCGAGGAGGGGGC
1521 CTCAGGAGAAACCAACCCTGCAATCACCTTGATCTTGGGCTTTCAGCCCCCAAAGGTGTGAGAAAATAAACTTCGGTTGA
1601 TAAACTGCT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uuUAGGGUAGGG-GUCCUUGGGg 5'
            |||:|| |:| | | ||||| 
Target 5' tgATCTCAGCTCACTGCAACCCc 3'
1174 - 1196 136.00 -20.10
2
miRNA  3' uuuAGGGUAG-------GGGUCCUUGGGg 5'
             ||| |||       ||::||||::| 
Target 5' cttTCCGATCTGTGTAACCTGGGAATTCc 3'
710 - 738 127.00 -21.11
3
miRNA  3' uuUAGGGUAGGGGUCCUUGGGg 5'
            | ::||| : : |||:|:| 
Target 5' caAATTCATATGTTGGAGCTCt 3'
979 - 1000 120.00 -12.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN28759646 31 COSMIC
COSN19405935 43 COSMIC
COSN13658250 56 COSMIC
COSN31494467 59 COSMIC
COSN25748699 61 COSMIC
COSN31562522 62 COSMIC
COSN30145132 115 COSMIC
COSN30154447 129 COSMIC
COSN5215569 156 COSMIC
COSN30107484 171 COSMIC
COSN1184220 255 COSMIC
COSN8494586 479 COSMIC
COSN24939060 484 COSMIC
COSN22424874 538 COSMIC
COSN21018222 644 COSMIC
COSN25120190 766 COSMIC
COSN8494587 1003 COSMIC
COSN25040438 1110 COSMIC
COSN9644183 1885 COSMIC
COSN25172948 2218 COSMIC
COSN24354907 2660 COSMIC
COSN24354908 2680 COSMIC
COSN226797 2725 COSMIC
COSN30283513 2766 COSMIC
COSN29167466 2920 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs753404930 1 dbSNP
rs757108980 2 dbSNP
rs1199724366 4 dbSNP
rs575160611 8 dbSNP
rs778526198 14 dbSNP
rs1449715238 15 dbSNP
rs1481627714 17 dbSNP
rs745831848 24 dbSNP
rs1407878543 27 dbSNP
rs1401849325 28 dbSNP
rs771931271 29 dbSNP
rs560474206 33 dbSNP
rs920683229 35 dbSNP
rs142116598 40 dbSNP
rs151182255 43 dbSNP
rs373623228 44 dbSNP
rs773513415 48 dbSNP
rs372635629 49 dbSNP
rs544181277 61 dbSNP
rs1306425967 62 dbSNP
rs1046329879 65 dbSNP
rs1292893395 69 dbSNP
rs923821707 74 dbSNP
rs563867148 84 dbSNP
rs1346115995 86 dbSNP
rs1302282406 87 dbSNP
rs1343755294 90 dbSNP
rs940643255 95 dbSNP
rs571881553 99 dbSNP
rs750921044 114 dbSNP
rs191624430 115 dbSNP
rs1298970277 121 dbSNP
rs1279574127 126 dbSNP
rs1352827114 127 dbSNP
rs1178370188 133 dbSNP
rs1247767392 137 dbSNP
rs560782195 145 dbSNP
rs1189469477 146 dbSNP
rs1197657443 164 dbSNP
rs893640487 168 dbSNP
rs1034643334 182 dbSNP
rs1196004445 183 dbSNP
rs1480143384 184 dbSNP
rs1240169363 185 dbSNP
rs995965093 188 dbSNP
rs749341844 190 dbSNP
rs1205071684 191 dbSNP
rs531475816 202 dbSNP
rs1050587019 203 dbSNP
rs1282596941 206 dbSNP
rs1474921660 217 dbSNP
rs1187343478 218 dbSNP
rs890142754 230 dbSNP
rs543049524 233 dbSNP
rs1337329349 237 dbSNP
rs755180438 247 dbSNP
rs574272212 256 dbSNP
rs546867647 261 dbSNP
rs962252689 267 dbSNP
rs1470359663 270 dbSNP
rs759794962 270 dbSNP
rs775052612 270 dbSNP
rs967106695 270 dbSNP
rs564903818 273 dbSNP
rs533654224 274 dbSNP
rs372994474 277 dbSNP
rs199693534 278 dbSNP
rs567171712 279 dbSNP
rs1455857254 280 dbSNP
rs1376096692 281 dbSNP
rs527838854 284 dbSNP
rs549591439 286 dbSNP
rs1418129949 289 dbSNP
rs1248007054 291 dbSNP
rs1184861870 293 dbSNP
rs1461384690 293 dbSNP
rs919878570 294 dbSNP
rs1344991934 298 dbSNP
rs1201679198 301 dbSNP
rs1352835887 306 dbSNP
rs931117241 309 dbSNP
rs567650233 310 dbSNP
rs982649209 321 dbSNP
rs1382107890 323 dbSNP
rs1334872041 324 dbSNP
rs1384386749 334 dbSNP
rs917291734 335 dbSNP
rs971426548 337 dbSNP
rs6497543 345 dbSNP
rs1158305003 351 dbSNP
rs924607559 354 dbSNP
rs1452126036 361 dbSNP
rs935289428 369 dbSNP
rs373321937 370 dbSNP
rs1231501167 375 dbSNP
rs1241987384 376 dbSNP
rs915107598 380 dbSNP
rs931780623 387 dbSNP
rs1181263886 393 dbSNP
rs1448609865 396 dbSNP
rs1262376280 403 dbSNP
rs1204254635 406 dbSNP
rs1050204446 410 dbSNP
rs1302087750 411 dbSNP
rs565800530 427 dbSNP
rs1347917461 435 dbSNP
rs1202108790 438 dbSNP
rs1045891052 439 dbSNP
rs879684644 441 dbSNP
rs1446269426 449 dbSNP
rs1318254077 450 dbSNP
rs1216231963 454 dbSNP
rs1008569210 458 dbSNP
rs571271575 460 dbSNP
rs1304204334 469 dbSNP
rs1424870857 476 dbSNP
rs1384245327 478 dbSNP
rs1250176120 492 dbSNP
rs1160906054 496 dbSNP
rs575186468 510 dbSNP
rs1373513364 515 dbSNP
rs770835377 517 dbSNP
rs1056425239 532 dbSNP
rs1395772533 539 dbSNP
rs375743943 540 dbSNP
rs1479016370 541 dbSNP
rs1490234184 545 dbSNP
rs1289907953 557 dbSNP
rs1197561442 559 dbSNP
rs1340170608 561 dbSNP
rs1269739601 565 dbSNP
rs995111579 568 dbSNP
rs1384871943 575 dbSNP
rs776635481 576 dbSNP
rs554577060 577 dbSNP
rs769866378 579 dbSNP
rs894654609 585 dbSNP
rs1013463581 595 dbSNP
rs1396586324 603 dbSNP
rs1024402563 606 dbSNP
rs971922779 619 dbSNP
rs963662220 621 dbSNP
rs1199830518 622 dbSNP
rs977530606 625 dbSNP
rs775015639 631 dbSNP
rs1245144200 633 dbSNP
rs1479990701 633 dbSNP
rs1438681525 634 dbSNP
rs1272340904 639 dbSNP
rs975125816 646 dbSNP
rs1031658895 654 dbSNP
rs957357234 655 dbSNP
rs1324717913 664 dbSNP
rs1264306812 671 dbSNP
rs1331193655 687 dbSNP
rs1363966437 707 dbSNP
rs1281706514 710 dbSNP
rs1336032049 716 dbSNP
rs762398497 717 dbSNP
rs1463634934 718 dbSNP
rs1408125484 719 dbSNP
rs1177085216 721 dbSNP
rs184617989 730 dbSNP
rs1349830180 731 dbSNP
rs1422799567 734 dbSNP
rs952668165 739 dbSNP
rs1470623785 747 dbSNP
rs188936960 753 dbSNP
rs1228882757 756 dbSNP
rs7191909 757 dbSNP
rs554797587 764 dbSNP
rs1466920658 765 dbSNP
rs1203581266 768 dbSNP
rs1310996735 775 dbSNP
rs911718816 778 dbSNP
rs1213318731 784 dbSNP
rs908374747 790 dbSNP
rs1453470180 792 dbSNP
rs773854387 808 dbSNP
rs576036777 809 dbSNP
rs767531942 815 dbSNP
rs1363778290 817 dbSNP
rs543578856 823 dbSNP
rs1336898973 826 dbSNP
rs1161949007 832 dbSNP
rs897523454 838 dbSNP
rs930266365 851 dbSNP
rs117548295 856 dbSNP
rs1401076431 859 dbSNP
rs1461195237 862 dbSNP
rs767864722 864 dbSNP
rs1407452741 865 dbSNP
rs914768033 871 dbSNP
rs182033450 876 dbSNP
rs750794677 879 dbSNP
rs139657409 880 dbSNP
rs903346632 888 dbSNP
rs907350973 889 dbSNP
rs1040747896 899 dbSNP
rs1284397150 902 dbSNP
rs376080212 902 dbSNP
rs1237503394 904 dbSNP
rs560756039 911 dbSNP
rs1361208771 912 dbSNP
rs1326252661 913 dbSNP
rs1334623568 920 dbSNP
rs1410366247 924 dbSNP
rs1227267883 925 dbSNP
rs899605724 936 dbSNP
rs1290572416 942 dbSNP
rs528033734 947 dbSNP
rs998926794 949 dbSNP
rs1344378744 952 dbSNP
rs549288202 959 dbSNP
rs1426759365 962 dbSNP
rs575931878 966 dbSNP
rs1162965868 969 dbSNP
rs1422139785 970 dbSNP
rs1358713213 972 dbSNP
rs990071765 977 dbSNP
rs145265136 978 dbSNP
rs1015550445 985 dbSNP
rs549835341 988 dbSNP
rs571410579 989 dbSNP
rs1249945365 993 dbSNP
rs986060570 994 dbSNP
rs928667577 998 dbSNP
rs1319386191 1004 dbSNP
rs371032374 1006 dbSNP
rs1215053208 1010 dbSNP
rs1339814233 1011 dbSNP
rs1256009794 1018 dbSNP
rs992021250 1022 dbSNP
rs911736183 1025 dbSNP
rs1302793505 1027 dbSNP
rs1456636155 1028 dbSNP
rs1356352821 1040 dbSNP
rs1171273920 1045 dbSNP
rs1368732709 1049 dbSNP
rs947403020 1050 dbSNP
rs944542156 1056 dbSNP
rs1480973073 1060 dbSNP
rs1041933956 1092 dbSNP
rs1459152235 1096 dbSNP
rs1190263382 1098 dbSNP
rs1487322871 1101 dbSNP
rs1491232947 1112 dbSNP
rs1229993282 1113 dbSNP
rs1491186041 1113 dbSNP
rs35457248 1113 dbSNP
rs398028996 1113 dbSNP
rs398042072 1113 dbSNP
rs752880570 1113 dbSNP
rs1165728335 1114 dbSNP
rs1395162439 1119 dbSNP
rs924884298 1120 dbSNP
rs1309852890 1130 dbSNP
rs1485648561 1131 dbSNP
rs1413995621 1132 dbSNP
rs1313190392 1134 dbSNP
rs1465200317 1135 dbSNP
rs1341997678 1138 dbSNP
rs112500722 1139 dbSNP
rs1179188144 1140 dbSNP
rs1470625055 1165 dbSNP
rs1250909686 1171 dbSNP
rs1174453297 1173 dbSNP
rs971820024 1174 dbSNP
rs1041205199 1184 dbSNP
rs1177211344 1187 dbSNP
rs553791957 1189 dbSNP
rs1235890772 1190 dbSNP
rs1207376749 1195 dbSNP
rs565834868 1200 dbSNP
rs1324244475 1207 dbSNP
rs544141608 1211 dbSNP
rs1485617712 1212 dbSNP
rs930304254 1214 dbSNP
rs1048795312 1215 dbSNP
rs1374752039 1218 dbSNP
rs894139176 1220 dbSNP
rs1453964891 1221 dbSNP
rs1402143571 1223 dbSNP
rs554453591 1225 dbSNP
rs576155323 1229 dbSNP
rs1171143323 1230 dbSNP
rs543666279 1247 dbSNP
rs888107975 1256 dbSNP
rs185474393 1257 dbSNP
rs12598720 1258 dbSNP
rs1003336979 1261 dbSNP
rs372751801 1264 dbSNP
rs550981978 1264 dbSNP
rs1045969890 1269 dbSNP
rs907380148 1270 dbSNP
rs1373049970 1271 dbSNP
rs1486735368 1274 dbSNP
rs991575517 1276 dbSNP
rs1434064526 1285 dbSNP
rs1303287521 1301 dbSNP
rs998956554 1302 dbSNP
rs1404099239 1303 dbSNP
rs1019802087 1307 dbSNP
rs1380294653 1311 dbSNP
rs1022151543 1314 dbSNP
rs1246842193 1315 dbSNP
rs1053136980 1322 dbSNP
rs893187258 1324 dbSNP
rs1230764214 1327 dbSNP
rs1384480341 1331 dbSNP
rs1301365875 1352 dbSNP
rs541022669 1365 dbSNP
rs200409160 1366 dbSNP
rs1358258302 1371 dbSNP
rs1011607885 1374 dbSNP
rs745358152 1375 dbSNP
rs1347160000 1387 dbSNP
rs1028779389 1389 dbSNP
rs559327051 1391 dbSNP
rs1185318939 1392 dbSNP
rs771534696 1394 dbSNP
rs11645907 1400 dbSNP
rs1262135869 1401 dbSNP
rs1018833803 1402 dbSNP
rs944296952 1422 dbSNP
rs965886196 1426 dbSNP
rs1294220310 1431 dbSNP
rs1223241164 1441 dbSNP
rs1247087399 1442 dbSNP
rs1355714464 1451 dbSNP
rs971851118 1455 dbSNP
rs572634099 1457 dbSNP
rs951816568 1458 dbSNP
rs1277910787 1465 dbSNP
rs1398576570 1474 dbSNP
rs977012007 1476 dbSNP
rs1304600956 1478 dbSNP
rs543270531 1482 dbSNP
rs1389344882 1484 dbSNP
rs915591182 1491 dbSNP
rs1432030469 1493 dbSNP
rs932843776 1497 dbSNP
rs948386837 1499 dbSNP
rs117737549 1500 dbSNP
rs1476725318 1505 dbSNP
rs928864529 1510 dbSNP
rs1199845777 1511 dbSNP
rs1451408777 1514 dbSNP
rs934840145 1520 dbSNP
rs531887348 1533 dbSNP
rs150184536 1537 dbSNP
rs893301806 1544 dbSNP
rs1257986785 1568 dbSNP
rs1217124900 1570 dbSNP
rs1347767244 1576 dbSNP
rs375116601 1581 dbSNP
rs145714937 1595 dbSNP
rs1049821451 1596 dbSNP
rs889796507 1624 dbSNP
rs1437586212 1626 dbSNP
rs1036699034 1632 dbSNP
rs865788321 1648 dbSNP
rs1392628877 1653 dbSNP
rs1400866330 1655 dbSNP
rs1169853980 1668 dbSNP
rs1464059996 1670 dbSNP
rs532517974 1672 dbSNP
rs547366714 1693 dbSNP
rs1019281424 1695 dbSNP
rs1003452126 1710 dbSNP
rs1245235717 1711 dbSNP
rs1184000424 1712 dbSNP
rs1458283948 1712 dbSNP
rs965987089 1719 dbSNP
rs1315637662 1726 dbSNP
rs1197302771 1733 dbSNP
rs1326336909 1744 dbSNP
rs566101243 1751 dbSNP
rs1264086453 1753 dbSNP
rs1034040877 1759 dbSNP
rs1343762050 1763 dbSNP
rs77446166 1765 dbSNP
rs1269198684 1771 dbSNP
rs1011174147 1774 dbSNP
rs1466480115 1779 dbSNP
rs1444451941 1780 dbSNP
rs1408240807 1786 dbSNP
rs1026175828 1792 dbSNP
rs1413706807 1794 dbSNP
rs1423260782 1798 dbSNP
rs1210223026 1804 dbSNP
rs968783046 1806 dbSNP
rs1379739649 1807 dbSNP
rs1176877785 1813 dbSNP
rs768039980 1816 dbSNP
rs951847190 1818 dbSNP
rs1209781789 1832 dbSNP
rs1487909049 1839 dbSNP
rs984961787 1840 dbSNP
rs548439005 1846 dbSNP
rs565550010 1850 dbSNP
rs965384505 1853 dbSNP
rs1286862105 1854 dbSNP
rs1241827399 1856 dbSNP
rs1191233736 1863 dbSNP
rs1269435961 1866 dbSNP
rs1307836248 1866 dbSNP
rs1417262444 1870 dbSNP
rs1384820776 1877 dbSNP
rs1284725560 1880 dbSNP
rs189650469 1883 dbSNP
rs372831263 1888 dbSNP
rs377169164 1889 dbSNP
rs1360163570 1900 dbSNP
rs1163134154 1905 dbSNP
rs773623668 1915 dbSNP
rs567499743 1918 dbSNP
rs1393982656 1924 dbSNP
rs1181785895 1933 dbSNP
rs763142894 1936 dbSNP
rs934951653 1945 dbSNP
rs1053279612 1959 dbSNP
rs939747383 1967 dbSNP
rs1284873499 1969 dbSNP
rs1036814761 1970 dbSNP
rs914769027 1971 dbSNP
rs947529058 1974 dbSNP
rs1050288684 1975 dbSNP
rs1376954633 1986 dbSNP
rs1289459077 1994 dbSNP
rs889837229 2001 dbSNP
rs1340067821 2008 dbSNP
rs1296560467 2009 dbSNP
rs1426835841 2015 dbSNP
rs1231835045 2021 dbSNP
rs1350537942 2022 dbSNP
rs1164241870 2025 dbSNP
rs944043299 2026 dbSNP
rs1422276886 2027 dbSNP
rs1194789226 2030 dbSNP
rs1477710758 2031 dbSNP
rs1261539210 2032 dbSNP
rs576989025 2033 dbSNP
rs1489294915 2034 dbSNP
rs1181616124 2036 dbSNP
rs1220198264 2041 dbSNP
rs1319817271 2042 dbSNP
rs1259945664 2048 dbSNP
rs1010706171 2054 dbSNP
rs1317040926 2059 dbSNP
rs534742465 2063 dbSNP
rs897141970 2068 dbSNP
rs1043954038 2069 dbSNP
rs1388729572 2073 dbSNP
rs1266730814 2074 dbSNP
rs1479333000 2075 dbSNP
rs1181441014 2076 dbSNP
rs1292947039 2083 dbSNP
rs1252446828 2087 dbSNP
rs1356736446 2088 dbSNP
rs993442414 2099 dbSNP
rs1473473823 2103 dbSNP
rs902395084 2112 dbSNP
rs998889252 2115 dbSNP
rs1185503492 2116 dbSNP
rs180831720 2118 dbSNP
rs965332233 2130 dbSNP
rs879486057 2134 dbSNP
rs185931959 2138 dbSNP
rs188569174 2148 dbSNP
rs1006016863 2150 dbSNP
rs1199190899 2159 dbSNP
rs1457308538 2161 dbSNP
rs1023145592 2169 dbSNP
rs984426639 2178 dbSNP
rs774336651 2183 dbSNP
rs546880759 2184 dbSNP
rs1035341326 2185 dbSNP
rs367730679 2191 dbSNP
rs561587397 2197 dbSNP
rs1293085466 2200 dbSNP
rs1398749591 2202 dbSNP
rs1178729810 2203 dbSNP
rs1201914764 2203 dbSNP
rs1236317081 2203 dbSNP
rs1255233425 2203 dbSNP
rs1304923615 2203 dbSNP
rs1381613418 2203 dbSNP
rs1466898383 2203 dbSNP
rs1483441293 2203 dbSNP
rs938970076 2203 dbSNP
rs1055206180 2204 dbSNP
rs1356188013 2207 dbSNP
rs1380299624 2212 dbSNP
rs1228538158 2217 dbSNP
rs1397167959 2218 dbSNP
rs576370030 2218 dbSNP
rs1301519613 2219 dbSNP
rs543607748 2219 dbSNP
rs914801926 2220 dbSNP
rs947544011 2221 dbSNP
rs34181443 2224 dbSNP
rs369332459 2224 dbSNP
rs778562525 2224 dbSNP
rs1378000458 2225 dbSNP
rs972977036 2225 dbSNP
rs1189493615 2226 dbSNP
rs999340136 2230 dbSNP
rs1484010219 2231 dbSNP
rs1179910469 2232 dbSNP
rs918875105 2232 dbSNP
rs1236687426 2235 dbSNP
rs1472972598 2237 dbSNP
rs911371413 2240 dbSNP
rs1183873631 2243 dbSNP
rs1216230765 2245 dbSNP
rs1417629598 2250 dbSNP
rs72782835 2255 dbSNP
rs1267378887 2265 dbSNP
rs1041513923 2266 dbSNP
rs1340414562 2268 dbSNP
rs35618948 2287 dbSNP
rs8057454 2301 dbSNP
rs1433435573 2308 dbSNP
rs1028736675 2326 dbSNP
rs1334006188 2331 dbSNP
rs79027483 2350 dbSNP
rs1006203653 2355 dbSNP
rs760621995 2374 dbSNP
rs1164551942 2380 dbSNP
rs1458293066 2391 dbSNP
rs559615062 2398 dbSNP
rs1450630133 2406 dbSNP
rs181101078 2412 dbSNP
rs1047682878 2419 dbSNP
rs1367820951 2431 dbSNP
rs1285636153 2439 dbSNP
rs8057795 2447 dbSNP
rs1478669710 2454 dbSNP
rs1263689520 2457 dbSNP
rs1193215211 2473 dbSNP
rs185989755 2474 dbSNP
rs1269482525 2482 dbSNP
rs1210517899 2490 dbSNP
rs1356214585 2492 dbSNP
rs1264226865 2493 dbSNP
rs1022834986 2507 dbSNP
rs905672840 2511 dbSNP
rs1002653144 2513 dbSNP
rs1232013660 2518 dbSNP
rs1035371992 2524 dbSNP
rs111940545 2527 dbSNP
rs988396585 2530 dbSNP
rs1386872100 2535 dbSNP
rs1389454216 2538 dbSNP
rs1162669487 2545 dbSNP
rs916225525 2551 dbSNP
rs1442851829 2552 dbSNP
rs1021838440 2555 dbSNP
rs969031025 2575 dbSNP
rs1379620722 2583 dbSNP
rs1383589545 2586 dbSNP
rs755571951 2589 dbSNP
rs1044019203 2590 dbSNP
rs986098657 2601 dbSNP
rs1201066592 2617 dbSNP
rs570873619 2617 dbSNP
rs558722011 2622 dbSNP
rs944175474 2626 dbSNP
rs569927860 2627 dbSNP
rs537369169 2641 dbSNP
rs1303827240 2647 dbSNP
rs765158926 2649 dbSNP
rs1330001902 2654 dbSNP
rs1040193568 2656 dbSNP
rs767869397 2660 dbSNP
rs1448831618 2671 dbSNP
rs1400948591 2682 dbSNP
rs929970369 2695 dbSNP
rs1330381100 2703 dbSNP
rs1048461897 2704 dbSNP
rs1404145602 2705 dbSNP
rs1173343963 2709 dbSNP
rs909874008 2711 dbSNP
rs941979831 2713 dbSNP
rs1416568149 2723 dbSNP
rs1044688864 2739 dbSNP
rs1238129315 2740 dbSNP
rs1202803308 2756 dbSNP
rs1049863964 2766 dbSNP
rs905707947 2769 dbSNP
rs563126166 2772 dbSNP
rs889765173 2773 dbSNP
rs1300545156 2774 dbSNP
rs1433914462 2791 dbSNP
rs1241728089 2792 dbSNP
rs1003094223 2798 dbSNP
rs758644805 2812 dbSNP
rs891510880 2830 dbSNP
rs1017168085 2834 dbSNP
rs552382998 2839 dbSNP
rs1334634863 2845 dbSNP
rs112714066 2862 dbSNP
rs778171646 2867 dbSNP
rs1420402728 2870 dbSNP
rs1021284510 2882 dbSNP
rs968777432 2884 dbSNP
rs751869485 2885 dbSNP
rs1220824983 2888 dbSNP
rs1035183696 2891 dbSNP
rs1018919998 2893 dbSNP
rs1281923932 2894 dbSNP
rs1277778394 2901 dbSNP
rs960939689 2907 dbSNP
rs1328142711 2908 dbSNP
rs965579850 2910 dbSNP
rs1353763800 2940 dbSNP
rs1283025072 2941 dbSNP
rs1221991354 2943 dbSNP
rs755953113 2946 dbSNP
rs990963882 2947 dbSNP
rs1284501556 2950 dbSNP
rs1447051004 2953 dbSNP
rs1023409129 2969 dbSNP
rs968096406 2982 dbSNP
rs570625858 2985 dbSNP
rs373236272 2986 dbSNP
rs1359969228 2989 dbSNP
rs568925183 2994 dbSNP
rs577514411 2998 dbSNP
rs1162988691 3008 dbSNP
rs1415197745 3008 dbSNP
rs1474418290 3018 dbSNP
rs923828325 3021 dbSNP
rs918753824 3027 dbSNP
rs951484851 3029 dbSNP
rs1195390037 3030 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000311620.5 | 3UTR | AAAAGGUGGAGGUUGCAGUGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE38974 Chronic obstructive pulmonary disease -0.488 6.7e-3 -0.402 2.3e-2 25 Click to see details
GSE38226 Liver fibrosis -0.432 2.5e-2 -0.562 4.0e-3 21 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.395 4.2e-2 0.514 1.0e-2 20 Click to see details
GSE35602 Colorectal cancer stromal tissue -0.296 7.5e-2 -0.047 4.1e-1 25 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.453 1.1e-1 0.533 7.0e-2 9 Click to see details
GSE42095 Differentiated embryonic stem cells 0.264 1.1e-1 0.042 4.2e-1 23 Click to see details
GSE19350 CNS germ cell tumors -0.366 1.2e-1 -0.260 2.1e-1 12 Click to see details
GSE21032 Prostate cancer 0.12 1.4e-1 0.198 3.6e-2 83 Click to see details
GSE32688 Pancreatic cancer -0.181 1.6e-1 0.052 3.9e-1 32 Click to see details
GSE21687 Ependynoma primary tumors 0.116 1.8e-1 0.026 4.2e-1 64 Click to see details
GSE19783 ER+ ER+ breast cancer -0.186 2.2e-1 -0.128 3.0e-1 20 Click to see details
GSE28260 Renal cortex and medulla -0.198 2.6e-1 -0.033 4.6e-1 13 Click to see details
GSE28544 Breast cancer -0.114 3.0e-1 -0.098 3.2e-1 24 Click to see details
GSE19783 ER- ER- breast cancer 0.052 3.2e-1 0.045 3.5e-1 79 Click to see details
GSE19536 Breast cancer 0.016 4.4e-1 0.032 3.8e-1 100 Click to see details
GSE26953 Aortic valvular endothelial cells -0.022 4.6e-1 -0.051 4.1e-1 24 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.329 0.02 -0.209 0.1 40 Click to see details
UCEC 0.428 0.03 0.321 0.09 19 Click to see details
BLCA 0.433 0.05 0.229 0.2 16 Click to see details
COAD -0.624 0.05 -0.357 0.19 8 Click to see details
THCA 0.178 0.09 0.269 0.02 59 Click to see details
CESC 0.952 0.1 1.000 0.5 3 Click to see details
STAD 0.218 0.13 0.221 0.13 28 Click to see details
KIRP 0.19 0.15 0.112 0.27 32 Click to see details
ESCA 0.34 0.15 0.218 0.26 11 Click to see details
PRAD 0.243 0.16 0.098 0.34 19 Click to see details
LUAD 0.376 0.16 0.579 0.05 9 Click to see details
PAAD 0.629 0.19 0.800 0.1 4 Click to see details
KIRC -0.047 0.36 -0.081 0.27 62 Click to see details
BRCA -0.039 0.37 0.048 0.34 78 Click to see details
CHOL 0.135 0.37 -0.048 0.46 8 Click to see details
LIHC 0.049 0.39 0.090 0.3 38 Click to see details
KICH 0.051 0.42 0.188 0.21 20 Click to see details
LUSC 0.033 0.42 0.103 0.27 38 Click to see details
LUSC 0.033 0.42 0.103 0.27 38 Click to see details
LUSC 0.033 0.42 0.103 0.27 38 Click to see details
LUSC 0.033 0.42 0.103 0.27 38 Click to see details
131 hsa-miR-23a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT038958 ATF1 activating transcription factor 1 1 1
MIRT057661 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT395438 NFKBID NFKB inhibitor delta 2 2
MIRT463884 WNT7B Wnt family member 7B 2 4
MIRT475804 HDGF heparin binding growth factor 2 2
MIRT478528 CTNS cystinosin, lysosomal cystine transporter 2 2
MIRT479278 CHD4 chromodomain helicase DNA binding protein 4 2 6
MIRT492564 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT500353 ZNF385A zinc finger protein 385A 2 2
MIRT509788 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT511566 HIST3H2BB histone cluster 3 H2B family member b 2 4
MIRT525450 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539558 CNKSR3 CNKSR family member 3 2 4
MIRT540034 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT540225 SAMD5 sterile alpha motif domain containing 5 2 2
MIRT540242 RGS17 regulator of G protein signaling 17 2 2
MIRT540871 ZBTB24 zinc finger and BTB domain containing 24 2 2
MIRT559065 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT560685 HIST1H1T histone cluster 1 H1 family member t 2 2
MIRT565593 SLC35G1 solute carrier family 35 member G1 2 2
MIRT565642 SKI SKI proto-oncogene 2 2
MIRT576747 Tmem127 transmembrane protein 127 2 2
MIRT607712 LIMS1 LIM zinc finger domain containing 1 2 2
MIRT615682 NAV2 neuron navigator 2 2 2
MIRT617337 ZSCAN2 zinc finger and SCAN domain containing 2 2 2
MIRT617378 FAM227A family with sequence similarity 227 member A 2 2
MIRT620855 SERPING1 serpin family G member 1 2 2
MIRT625112 SLC1A5 solute carrier family 1 member 5 2 2
MIRT625124 NUP93 nucleoporin 93 2 2
MIRT625898 LINC00632 long intergenic non-protein coding RNA 632 2 2
MIRT626016 XRCC2 X-ray repair cross complementing 2 2 2
MIRT626481 ADAT1 adenosine deaminase, tRNA specific 1 2 2
MIRT626573 MED7 mediator complex subunit 7 2 2
MIRT626814 PRR11 proline rich 11 2 2
MIRT628136 HM13 histocompatibility minor 13 2 2
MIRT630771 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT633133 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT636950 APTX aprataxin 2 2
MIRT637802 GGPS1 geranylgeranyl diphosphate synthase 1 2 2
MIRT638622 GSR glutathione-disulfide reductase 2 4
MIRT642196 SMAGP small cell adhesion glycoprotein 2 2
MIRT645121 HES2 hes family bHLH transcription factor 2 2 2
MIRT645344 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT646564 ALDH5A1 aldehyde dehydrogenase 5 family member A1 2 2
MIRT649243 TRIM65 tripartite motif containing 65 2 2
MIRT651810 USP49 ubiquitin specific peptidase 49 2 2
MIRT652137 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT652668 TIMELESS timeless circadian clock 2 2
MIRT655894 NEK9 NIMA related kinase 9 2 2
MIRT656564 LYRM7 LYR motif containing 7 2 2
MIRT657194 IKZF3 IKAROS family zinc finger 3 2 2
MIRT657907 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT660207 BMPR1A bone morphogenetic protein receptor type 1A 2 2
MIRT660619 ANKS4B ankyrin repeat and sterile alpha motif domain containing 4B 2 2
MIRT660826 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT660986 ABHD2 abhydrolase domain containing 2 2 2
MIRT662232 PGBD4 piggyBac transposable element derived 4 2 2
MIRT663691 ZNF347 zinc finger protein 347 2 2
MIRT665577 TUBD1 tubulin delta 1 2 2
MIRT666149 SP2 Sp2 transcription factor 2 2
MIRT666310 SLC22A3 solute carrier family 22 member 3 2 2
MIRT666457 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT667716 KIAA1468 KIAA1468 2 2
MIRT668329 FKBP5 FK506 binding protein 5 2 2
MIRT668370 FBXO47 F-box protein 47 2 2
MIRT669304 C17orf75 chromosome 17 open reading frame 75 2 2
MIRT669538 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT671681 ADK adenosine kinase 2 2
MIRT672177 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT673604 HPSE heparanase 2 2
MIRT673749 ZNF333 zinc finger protein 333 2 2
MIRT674807 FAM229B family with sequence similarity 229 member B 2 2
MIRT675286 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT675391 SVOP SV2 related protein 2 2
MIRT675788 MED28 mediator complex subunit 28 2 2
MIRT676151 OGFOD1 2-oxoglutarate and iron dependent oxygenase domain containing 1 2 2
MIRT676499 GJD3 gap junction protein delta 3 2 2
MIRT676621 CSNK1E casein kinase 1 epsilon 2 2
MIRT676644 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT676711 METTL14 methyltransferase like 14 2 2
MIRT676809 SHROOM4 shroom family member 4 2 2
MIRT677036 FOXO3 forkhead box O3 2 2
MIRT677062 NT5C2 5'-nucleotidase, cytosolic II 2 2
MIRT677086 SMIM15 small integral membrane protein 15 2 2
MIRT677193 MURC caveolae associated protein 4 2 2
MIRT677273 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT677345 POC1A POC1 centriolar protein A 2 2
MIRT677504 SLC10A6 solute carrier family 10 member 6 2 2
MIRT677526 OCIAD2 OCIA domain containing 2 2 2
MIRT677661 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT677727 SSR1 signal sequence receptor subunit 1 2 2
MIRT677803 PNPLA3 patatin like phospholipase domain containing 3 2 2
MIRT678144 SLC4A4 solute carrier family 4 member 4 2 2
MIRT678376 VTA1 vesicle trafficking 1 2 2
MIRT678708 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT678868 FAM118A family with sequence similarity 118 member A 2 2
MIRT679039 LACTB lactamase beta 2 2
MIRT679081 PURB purine rich element binding protein B 2 2
MIRT679137 SYK spleen associated tyrosine kinase 2 2
MIRT679299 SSBP2 single stranded DNA binding protein 2 2 2
MIRT679741 CABP4 calcium binding protein 4 2 2
MIRT679946 AS3MT arsenite methyltransferase 2 2
MIRT679976 E2F2 E2F transcription factor 2 2 2
MIRT683628 MTO1 mitochondrial tRNA translation optimization 1 2 2
MIRT683901 PSMB9 proteasome subunit beta 9 2 2
MIRT684172 MOG myelin oligodendrocyte glycoprotein 2 2
MIRT684231 C20orf144 chromosome 20 open reading frame 144 2 2
MIRT685403 C1orf158 chromosome 1 open reading frame 158 2 2
MIRT686253 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT687513 NCKAP1 NCK associated protein 1 2 2
MIRT688243 FITM2 fat storage inducing transmembrane protein 2 2 2
MIRT688315 FAM151B family with sequence similarity 151 member B 2 2
MIRT688733 CNDP1 carnosine dipeptidase 1 2 2
MIRT689031 ANGPTL3 angiopoietin like 3 2 2
MIRT698207 TMEM248 transmembrane protein 248 2 2
MIRT699859 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT709954 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT711541 MSH3 mutS homolog 3 2 2
MIRT712077 WDR37 WD repeat domain 37 2 2
MIRT715312 POLR2E RNA polymerase II subunit E 2 2
MIRT715725 PIAS2 protein inhibitor of activated STAT 2 2 2
MIRT715748 HSD11B1L hydroxysteroid 11-beta dehydrogenase 1 like 2 2
MIRT717604 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT717875 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT718042 NIPAL2 NIPA like domain containing 2 2 2
MIRT718829 CDT1 chromatin licensing and DNA replication factor 1 2 2
MIRT724037 CAMK2N2 calcium/calmodulin dependent protein kinase II inhibitor 2 2 2
MIRT733305 TNF tumor necrosis factor 1 0
MIRT734941 HSPA1B heat shock protein family A (Hsp70) member 1B 3 0
MIRT737343 IGF2 insulin like growth factor 2 3 0
MIRT737546 PTEN phosphatase and tensin homolog 2 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-23a 1'-Acetoxychavicol acetate (ACA) NULL 119104 Microarray HN4 cell line 24317043 2014 down-regulated
miR-23a 5-Fluorouracil approved 3385 Quantitative real-time PCR colon cancer cells 17702597 2007 up-regulated
miR-23a Curcumin NULL 969516 Microarray BxPC-3 human pancreatic carcinoma cell line 18347134 2008 up-regulated
miR-23a Enoxacin approved 3229 Quantitative real-time PCR HEK293 cells 18641635 2008 up-regulated
miR-23a 17beta-estradiol (E2) approved 5757 Quantitative real-time PCR endometrial stromal 19088369 2008 down-regulated
miR-23a 17beta-estradiol (E2) approved 5757 Quantitative real-time PCR glandular epithelial cells 19088369 2008 down-regulated
miR-23a Medroxyprogesterone acetate approved 6279 Quantitative real-time PCR endometrial stromal 19088369 2008 down-regulated
miR-23a Medroxyprogesterone acetate approved 6279 Quantitative real-time PCR glandular epithelial cells 19088369 2008 up-regulated
miR-23a 17beta-estradiol (E2) approved 5757 Microarray MCF-7 breast cancer cells 19528081 2009 up-regulated
miR-23a Diethylstilbestrol approved 448537 Microarray mammosphere-derived epithelial cells (MDEC) 19549897 2009 down-regulated
miR-23a Essential amino acids (EAA) NULL NULL Quantitative real-time PCR skeletal muscle of young adults 19828686 2009 up-regulated
miR-23a Bio-Oss NULL NULL Microarray osteoblast-like cell line (MG63) 20224834 2010 up-regulated
miR-23a Formaldehyde NULL 712 Microarray Human lung epithelial cells (A549) 21147603 2011 down-regulated
miR-23a 5-Fluorouracil approved 3385 Microarray MCF-7 breast cancer cells 21506117 2011 up-regulated
miR-23a Trastuzumab approved NULL Microarray BT474 cells 22384020 2012 up-regulated
miR-23a Trastuzumab approved NULL Microarray SKBR3 cells. 22384020 2012 up-regulated
miR-23a 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) NULL 15625 Quantitative real-time PCR thymus 23024791 2012 down-regulated
miR-23a Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse brain 19270793 2009 down-regulated
miR-23a Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) NULL 8490 Microarray mouse liver 19270793 2009 up-regulated
miR-23a Atorvastatin approved 60823 Quantitative real-time PCR Cardiomyocyte 23860036 2013 up-regualted
miR-23a Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 down-regulated
miR-23a Comfrey NULL 6440495 Microarray rat liver 21370286 2011 up-regulated
miR-23a Perfluorooctane sulfonate NULL 74483 Microarray zebrafish embryos 20878907 2011 up-regulated
miR-23a Ethanol NULL 702 Quantitative real-time PCR zebrafish embryos 22298809 2012 down-regulated
miR-23a 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) NULL 15625 Microarray embryos 22921993 2012 up-regulated
miR-23a 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) NULL 15625 Microarray embryos 22921993 2012 up-regulated
miR-23a Morphine approved 5288826 Microarray human monocyte-derived macrophages (h-mdms) infection with HIV-1 20564181 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-23a Cisplatin 5460033 NSC119875 approved sensitive Low Breast Cancer cell line (MDA-MB-231)
hsa-mir-23a Cisplatin 5460033 NSC119875 approved sensitive High Gastric Cancer cell line (BGC823)
hsa-mir-23a Cisplatin 5460033 NSC119875 approved sensitive High Gastric Cancer cell line (SGC-7901)
hsa-mir-23a Topotecan 60699 NSC609699 approved sensitive cell line (W1)
hsa-mir-23a Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-mir-23a Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-23a Androstenedione+Letrozole sensitive cell line (MCF-7)
hsa-mir-23a Cisplatin 5460033 NSC119875 approved sensitive cell line (OE19)
hsa-mir-23a Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-mir-23a Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-mir-23a Cisplatin 5460033 NSC119875 approved sensitive cell line (SGC-7901)
hsa-miR-23a-5p Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-23a-5p Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-23a-5p Palbociclib 5330286 NSC758247 approved resistant High Breast Cancer cell line (T47D)
hsa-miR-23a-5p Arsenic trioxide 261004 NSC759274 approved sensitive Low Acute Myeloid Leukemia cell line (U937, Kasumi-1, THP-1, Jurkat E6.1, SUP B15)
hsa-miR-23a-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-23a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-23a-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-23a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (CAL-27) (total RNA)
hsa-miR-23a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (cytosolic RNA)
hsa-miR-23a-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)
hsa-miR-23a-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (HS578T)
hsa-miR-23a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-23a-5p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-23a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-23a-5p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-23a-5p Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-23a-5p Sunitinib 5329102 NSC750690 approved resistant tissue (CardB)
hsa-miR-23a-5p Oxaliplatin 6857599 NSC266046 approved resistant cell line (IGROV-1)
hsa-miR-23a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-23a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (MDA-231)
hsa-miR-23a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-23a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)
hsa-miR-23a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-23a-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

Error report submission