miRTarBase - #MIRT661682


—
pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF623   
Synonyms -
Description zinc finger protein 623
Transcript NM_001082480   
Other Transcripts NM_014789   
Expression
Putative miRNA Targets on ZNF623
3'UTR of ZNF623
(miRNA target sites are highlighted)		 
>ZNF623|NM_001082480|3'UTR
   1 AATAATTACTTTCCCGCCCAGTGAGTGATGTTTGGAAATGCGTGGAATTAGGATTCATGTGGTTTCTAAGATTTGGACAT
  81 GTCAGAATTTTGTGAGTCATGGATGGGGCTGCTTTTGCAGTGGGTGCCACCTGCCACTGTGCAGCCCTACTCGGCTCAGC
 161 CCTTCTCCTCAGCTGTGAGCACTGTCCTCAGGAGAGTCACAGGGCTTGACACCTGACTCTGAGCTGGAACAGTAGGGGCA
 241 GGGAGAAGACAGGTCTCAAGAAAAGGTTTTTAAGAAGTTTCATCCCCAGTTAAGCAGAGTCCATCCTTGACTTAAATCCC
 321 TTATTACAGCACAACTGTGTATCTAATCTTACGATTTAGGAGAATGTTACCTAGGACATTTTGATGTGTTAAGTTGAAGA
 401 AAGGTAACTCGTGTATGAACCCCGAGCCATTTCCCTGTTGTCCTGAGGAGGAACTCCAGGCCTCCCATCGTGTGCCCTAA
 481 GGCCTCCTGCGTCCTGGAGCCCTGCCTCCCACTGCCTGACTTCCTGCCACACGGTTAATGCTGCAGCAACACCGACTGCT
 561 TCATCTTCCCTGTGCTCCACGTGGCTTCCTACCTCTCTCGCCTTTGTTCTTGTTGAAGGGTCTCTTCTCAGCTAATTAAC
 641 TCTGAATCATGGTTCAAGACAAGCCTCAGGCATCATGTCAATGGGTGTTTCCCTCAAGCTTAGTTGGCAGCACTCTCCAC
 721 ACTTCTGTGGCTCAGTGATTACTGCTATTACTATATTTACTTGCATATGTCAGAATGATGTGATAGACTATCTCTGTCAC
 801 TATGCTGTTGGGTTCCTGAGGACAGTGATCATATCTGATTGATTTCCATGTGTCCACTGTCTAGCACAGGGCAATAAAAA
 881 ATACACCCCTAAATCTATGTGTAATTGGCATCTCTCTTGCTTTGTCCTTTCTATACTGCCATTCTAAAAATTTTCAGCTG
 961 TTGGCTGTTTTTTTTGTTGTTTGTTCATTTTGTATCAGTATAATCTACGATTCTGTTAGAAGTATCTTCTCAGCCCTGCT
1041 ACTGTCTGCTGCTCCTACTTAGAAGTTGCAGGCAATATCCTGTGCACATCCACGCCCTCCTGTGTGCCACCTTACAGCTC
1121 ATGCAGAACTGTCTACTTGATCTGGAGGGCATTGACACCTGGCTCAGCTGGAACAGTGGGGACAGGAGGAGGCAGGTCTC
1201 AAGAGAAGGTCTTTACTTACTTGTCTGTATCTTTCTGTCTCACTCGAAAGGCACAGTCTCAATGCGCTACGTAACTCTTC
1281 TGTTGTAGCAGTTCTGAGGTTGAACTGAGCTCTTGTCATTTTCCATGCTCTCTGGCTCATTGTGTCATTTCAAAATGTAT
1361 TGATATCTATAAGGAATAGTCCTCAATGTTGGGAAAACAGATGAGCAACCCACTACCCTGAAGTCATCCACCGTGTAGTG
1441 GGGAAGACGGAGATCACAGTAGGGTGAGTTAAGTATGTGCCCTCAGGTGTGAAGGAGCACAGGTGAGGGGGTGCCTGCTG
1521 TGGCACAGAGCTGGGAAGGCCTTACAGAAGAGGTGACATTTCAGCTGGGCCAGAGATCAGTAGAGAGCAGCTGAAGAAGA
1601 AAATAGGGTCCAGGAGAGGAATCTGCAGAAACATGGAGCCATGACAGATGGCTTTTTGGCTAGGACTGTTCGAAAGCAGG
1681 CGAGGTAAATGGACAGTGGACAGCCGCCTCGCCAAACTGTTAGTCTTTACCTCTGAATTTCATCTGGACATGAACCCCAA
1761 AGTCCAGTTTTGTAACGATATAATTTTTTTCTCATGAGGCCATATTTTGAGTTCTTAAATACTACCAACCCTGAACGTCT
1841 CAGGACAAATAATTCAAAAAAGAGATCTACATTTTCTGGAAAATCAGCATTACTAGAGATGTTTCAAATGTAGATTTTAC
1921 CAGACCATTTTAATCAACTTTATTGAGATTCAATTTTCATATAGTAAAACGCCTATTTAAGTGTACAAGGTTTTGAAAAA
2001 TCTATACACCTGTGTAACCACCACCACCTGTGTAACCACCACCGCCAGAACCAAAAACGTTTCTGTCACCCAAAGAAGTT
2081 CCCTTTTGCCTTTTCCTAGTTAAGCCCACTCCAGCCCCAGATAACCACTTTCTATCCTCATAGATTAGTGTTGCTTGGTT
2161 TAGAGCCTCATACAAATGGATTCATTTACTATGTGTTCTTTTGCGTCTGATGTCTCACTTTGGCATGTTTTTAGACTCAT
2241 CCAAGCT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggUAGAAGGAAGUCGGag 5'
            ||||||  ||||||  
Target 5' gtATCTTC--TCAGCCct 3'
 1022 - 1037 140.00 -15.00
2 
miRNA  3' gguagaaggaAGUCGGag 5'
                    ||||||  
Target 5' cctactcggcTCAGCCct 3'
 146 - 163 120.00 -8.20
3 
miRNA  3' gguAGAAGGAAGUCGGag 5'
             |||||  |||||:  
Target 5' gtcTCTTC--TCAGCTaa 3'
 620 - 635 119.00 -8.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN1084570 10 COSMIC
COSN27006354 16 COSMIC
COSN30192779 17 COSMIC
COSN30523343 24 COSMIC
COSN31578549 42 COSMIC
COSN31491527 45 COSMIC
COSN30104303 53 COSMIC
COSN31524859 90 COSMIC
COSN31499576 102 COSMIC
COSN31499551 103 COSMIC
COSN31545941 127 COSMIC
COSN29136922 130 COSMIC
COSN28737471 153 COSMIC
COSN15627139 162 COSMIC
COSN30129201 175 COSMIC
COSN31567032 239 COSMIC
COSN30161805 363 COSMIC
COSN15627140 434 COSMIC
COSN30128858 440 COSMIC
COSN30542905 554 COSMIC
COSN30139354 628 COSMIC
COSN31485027 685 COSMIC
COSN8074085 692 COSMIC
COSN16599043 707 COSMIC
COSN30123406 714 COSMIC
COSN28660562 731 COSMIC
COSN31540684 769 COSMIC
COSN15627141 847 COSMIC
COSN30135081 872 COSMIC
COSN31490624 913 COSMIC
COSN30128978 915 COSMIC
COSN23013017 976 COSMIC
COSN30113367 982 COSMIC
COSN31480604 987 COSMIC
COSN31490631 987 COSMIC
COSN30111127 1024 COSMIC
COSN9258093 1050 COSMIC
COSN30539841 1056 COSMIC
COSN7668273 1094 COSMIC
COSN30531485 1132 COSMIC
COSN31571202 1225 COSMIC
COSN31565717 1261 COSMIC
COSN9258094 1312 COSMIC
COSN31490191 1318 COSMIC
COSN31485114 1385 COSMIC
COSN9258095 1389 COSMIC
COSN30127582 1450 COSMIC
COSN31544024 1498 COSMIC
COSN31520739 1529 COSMIC
COSN30143592 1558 COSMIC
COSN31582770 1635 COSMIC
COSN30144150 1706 COSMIC
COSN30111684 1792 COSMIC
COSN15627142 1794 COSMIC
COSN24302634 1796 COSMIC
COSN31545359 1837 COSMIC
COSN31481141 1842 COSMIC
COSN31482649 1879 COSMIC
COSN30161792 1914 COSMIC
COSN30530270 1934 COSMIC
COSN31549148 1948 COSMIC
COSN31528230 1978 COSMIC
COSN31963017 2005 COSMIC
COSN30129217 2076 COSMIC
COSN30125597 2166 COSMIC
COSN20673805 2170 COSMIC
COSN17037774 2198 COSMIC
COSN28741899 2210 COSMIC
COSN31572116 2238 COSMIC
COSN16415095 2240 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs759802722 10 dbSNP
rs1193635844 13 dbSNP
rs1437730832 13 dbSNP
rs770191591 14 dbSNP
rs763156712 16 dbSNP
rs143354851 17 dbSNP
rs760722447 23 dbSNP
rs766082059 24 dbSNP
rs753704147 28 dbSNP
rs541069441 30 dbSNP
rs1375393851 31 dbSNP
rs764887472 34 dbSNP
rs752159349 36 dbSNP
rs757921332 39 dbSNP
rs1256897485 40 dbSNP
rs777403433 40 dbSNP
rs1253817754 41 dbSNP
rs747469739 42 dbSNP
rs183743323 43 dbSNP
rs1341997846 47 dbSNP
rs187648581 58 dbSNP
rs946078996 60 dbSNP
rs898614769 69 dbSNP
rs1387892198 70 dbSNP
rs1418091009 79 dbSNP
rs151208078 80 dbSNP
rs995597316 81 dbSNP
rs563922946 86 dbSNP
rs1026095636 88 dbSNP
rs140388396 98 dbSNP
rs780822261 101 dbSNP
rs546357010 106 dbSNP
rs1168639514 107 dbSNP
rs1282250142 108 dbSNP
rs564204724 109 dbSNP
rs1034950455 110 dbSNP
rs1467314889 111 dbSNP
rs370741676 130 dbSNP
rs1424599859 135 dbSNP
rs960581928 140 dbSNP
rs1039940224 147 dbSNP
rs1477559912 150 dbSNP
rs747893336 151 dbSNP
rs12679735 153 dbSNP
rs1200856555 154 dbSNP
rs61488208 156 dbSNP
rs1023466710 158 dbSNP
rs1236965825 167 dbSNP
rs1196205161 168 dbSNP
rs997855685 174 dbSNP
rs1273241902 175 dbSNP
rs1218320653 181 dbSNP
rs1343263472 185 dbSNP
rs1276994711 187 dbSNP
rs1025699717 188 dbSNP
rs1439043978 189 dbSNP
rs1376811457 191 dbSNP
rs1184523157 194 dbSNP
rs1364897178 198 dbSNP
rs1401180401 202 dbSNP
rs968238292 203 dbSNP
rs1422731666 211 dbSNP
rs1174114158 217 dbSNP
rs979193038 217 dbSNP
rs1439668913 219 dbSNP
rs777343425 221 dbSNP
rs1176754234 222 dbSNP
rs749721232 226 dbSNP
rs1005234055 227 dbSNP
rs1208928033 237 dbSNP
rs935017023 238 dbSNP
rs1281085027 239 dbSNP
rs1235471731 240 dbSNP
rs1016649824 243 dbSNP
rs969178046 253 dbSNP
rs986401939 254 dbSNP
rs981036114 256 dbSNP
rs1283692968 258 dbSNP
rs1374092578 258 dbSNP
rs1446009841 261 dbSNP
rs759502116 261 dbSNP
rs1335174095 264 dbSNP
rs1435083854 273 dbSNP
rs561626173 274 dbSNP
rs529202395 290 dbSNP
rs1359709394 294 dbSNP
rs1156724667 296 dbSNP
rs1441489590 297 dbSNP
rs1312505762 313 dbSNP
rs550571649 333 dbSNP
rs912817317 338 dbSNP
rs1471560192 346 dbSNP
rs960940796 352 dbSNP
rs942952307 353 dbSNP
rs150378770 354 dbSNP
rs1329411320 376 dbSNP
rs1040309210 377 dbSNP
rs1335063563 379 dbSNP
rs144867884 381 dbSNP
rs988083744 387 dbSNP
rs1348404982 397 dbSNP
rs1233020558 399 dbSNP
rs931410772 401 dbSNP
rs913201601 403 dbSNP
rs568610487 411 dbSNP
rs1294103741 412 dbSNP
rs1399663791 416 dbSNP
rs1339543154 421 dbSNP
rs193297197 424 dbSNP
rs926051959 425 dbSNP
rs942845540 426 dbSNP
rs1403070184 427 dbSNP
rs1195844183 435 dbSNP
rs1415378301 438 dbSNP
rs1188168186 444 dbSNP
rs1249269147 458 dbSNP
rs1457703328 466 dbSNP
rs775045655 467 dbSNP
rs1057118947 470 dbSNP
rs896445766 471 dbSNP
rs1220058246 473 dbSNP
rs1012159693 480 dbSNP
rs1177391885 484 dbSNP
rs1218183516 486 dbSNP
rs1316298783 488 dbSNP
rs1040312253 491 dbSNP
rs1023919391 492 dbSNP
rs570661596 495 dbSNP
rs1001084788 498 dbSNP
rs1434248507 500 dbSNP
rs1376166225 501 dbSNP
rs934199793 502 dbSNP
rs1165018147 505 dbSNP
rs1464713731 506 dbSNP
rs772045826 507 dbSNP
rs185122420 509 dbSNP
rs1172437446 510 dbSNP
rs1047327118 517 dbSNP
rs1030763805 518 dbSNP
rs1463758300 519 dbSNP
rs1489761233 521 dbSNP
rs552959942 533 dbSNP
rs200922524 534 dbSNP
rs1260209358 537 dbSNP
rs536169186 539 dbSNP
rs1463994935 553 dbSNP
rs73369357 554 dbSNP
rs964290662 556 dbSNP
rs575880077 557 dbSNP
rs1439919075 561 dbSNP
rs920147608 569 dbSNP
rs1373095123 571 dbSNP
rs1326568508 574 dbSNP
rs1445379936 575 dbSNP
rs1397552999 576 dbSNP
rs1035231882 580 dbSNP
rs546466240 581 dbSNP
rs1377368512 582 dbSNP
rs1047637689 583 dbSNP
rs1455903959 592 dbSNP
rs1396197703 593 dbSNP
rs908632573 596 dbSNP
rs200845831 598 dbSNP
rs564622348 600 dbSNP
rs938747979 601 dbSNP
rs1057189918 602 dbSNP
rs978799116 615 dbSNP
rs1349853071 630 dbSNP
rs772457993 638 dbSNP
rs1275624045 640 dbSNP
rs1239376114 646 dbSNP
rs926020947 648 dbSNP
rs942747291 650 dbSNP
rs1391540410 651 dbSNP
rs975528849 668 dbSNP
rs922736644 669 dbSNP
rs894468692 675 dbSNP
rs1436945094 676 dbSNP
rs141981344 677 dbSNP
rs1158526029 678 dbSNP
rs1438405596 680 dbSNP
rs1439306447 681 dbSNP
rs760961814 682 dbSNP
rs887381991 686 dbSNP
rs903741419 693 dbSNP
rs1000714527 704 dbSNP
rs764011278 711 dbSNP
rs1030789000 713 dbSNP
rs1194246543 721 dbSNP
rs61473404 731 dbSNP
rs1486507431 736 dbSNP
rs561686899 739 dbSNP
rs904875821 739 dbSNP
rs528906965 743 dbSNP
rs761850441 748 dbSNP
rs1056230654 752 dbSNP
rs1339415481 754 dbSNP
rs896296879 756 dbSNP
rs1166944829 758 dbSNP
rs1356445091 765 dbSNP
rs1297985989 766 dbSNP
rs766275788 773 dbSNP
rs1159705979 776 dbSNP
rs1457447765 781 dbSNP
rs1366829238 789 dbSNP
rs1457393288 789 dbSNP
rs570859347 791 dbSNP
rs1475667035 793 dbSNP
rs967992328 801 dbSNP
rs1192658936 810 dbSNP
rs754758840 821 dbSNP
rs562678913 825 dbSNP
rs1205686976 831 dbSNP
rs533255860 832 dbSNP
rs551166152 842 dbSNP
rs1337708126 850 dbSNP
rs1263189150 858 dbSNP
rs983012098 860 dbSNP
rs566292834 863 dbSNP
rs145833382 867 dbSNP
rs1293419250 876 dbSNP
rs1277246185 878 dbSNP
rs938779074 885 dbSNP
rs955708321 888 dbSNP
rs138712751 889 dbSNP
rs915975871 895 dbSNP
rs1386729545 898 dbSNP
rs1388599037 900 dbSNP
rs1264043070 911 dbSNP
rs1487056198 916 dbSNP
rs1423165078 921 dbSNP
rs948763391 922 dbSNP
rs190073679 927 dbSNP
rs1474285861 931 dbSNP
rs1205877622 934 dbSNP
rs1193744467 939 dbSNP
rs777097040 940 dbSNP
rs1476856828 943 dbSNP
rs1250522027 953 dbSNP
rs1468575654 954 dbSNP
rs1256998361 955 dbSNP
rs748807740 958 dbSNP
rs1212479157 961 dbSNP
rs1341850374 968 dbSNP
rs139206799 968 dbSNP
rs1328585099 974 dbSNP
rs1441701013 976 dbSNP
rs199676905 977 dbSNP
rs1399696269 978 dbSNP
rs1418744321 980 dbSNP
rs1329513945 983 dbSNP
rs200620650 984 dbSNP
rs181813544 987 dbSNP
rs184039859 995 dbSNP
rs1365270046 997 dbSNP
rs188820479 1009 dbSNP
rs370123860 1014 dbSNP
rs937721979 1015 dbSNP
rs1297159881 1016 dbSNP
rs1358200546 1018 dbSNP
rs779558508 1019 dbSNP
rs1416297226 1020 dbSNP
rs1201935331 1023 dbSNP
rs879469416 1025 dbSNP
rs1273356416 1031 dbSNP
rs1377896585 1033 dbSNP
rs1200230785 1039 dbSNP
rs1346226218 1047 dbSNP
rs746430259 1050 dbSNP
rs1306227006 1055 dbSNP
rs892281210 1058 dbSNP
rs142765331 1075 dbSNP
rs1311223338 1079 dbSNP
rs1307190496 1089 dbSNP
rs1444546069 1093 dbSNP
rs1009808241 1095 dbSNP
rs1333817665 1096 dbSNP
rs1413673027 1109 dbSNP
rs558398946 1125 dbSNP
rs1240244950 1128 dbSNP
rs1379084484 1131 dbSNP
rs1019334079 1134 dbSNP
rs1174970606 1135 dbSNP
rs180785423 1143 dbSNP
rs1000762592 1147 dbSNP
rs1484872129 1152 dbSNP
rs1487425418 1153 dbSNP
rs1017543808 1159 dbSNP
rs540805869 1160 dbSNP
rs1225525166 1162 dbSNP
rs1374200410 1166 dbSNP
rs1027066264 1184 dbSNP
rs953027636 1187 dbSNP
rs983021160 1193 dbSNP
rs555202874 1194 dbSNP
rs1435181274 1197 dbSNP
rs1359812531 1207 dbSNP
rs1156899462 1211 dbSNP
rs960214616 1212 dbSNP
rs1408111104 1213 dbSNP
rs573669817 1213 dbSNP
rs916005556 1217 dbSNP
rs1162224262 1218 dbSNP
rs760766472 1220 dbSNP
rs1474026415 1221 dbSNP
rs948774720 1224 dbSNP
rs978818599 1230 dbSNP
rs1488200651 1235 dbSNP
rs543916550 1236 dbSNP
rs925932432 1244 dbSNP
rs767163343 1246 dbSNP
rs1419641039 1247 dbSNP
rs1231616855 1248 dbSNP
rs936624321 1255 dbSNP
rs1052319603 1260 dbSNP
rs892353484 1263 dbSNP
rs1294200780 1264 dbSNP
rs943880090 1266 dbSNP
rs1361061322 1267 dbSNP
rs962868366 1270 dbSNP
rs1040815008 1271 dbSNP
rs899617722 1272 dbSNP
rs1173879126 1275 dbSNP
rs1322310787 1275 dbSNP
rs937673273 1276 dbSNP
rs1056167862 1277 dbSNP
rs1165255837 1282 dbSNP
rs1301560273 1283 dbSNP
rs1376121423 1286 dbSNP
rs1417843003 1287 dbSNP
rs996995859 1291 dbSNP
rs917583715 1293 dbSNP
rs1308989014 1307 dbSNP
rs143760755 1311 dbSNP
rs945070580 1313 dbSNP
rs1042181490 1315 dbSNP
rs1351972650 1319 dbSNP
rs1026682500 1323 dbSNP
rs1306651973 1325 dbSNP
rs185498448 1328 dbSNP
rs1293187731 1330 dbSNP
rs1216184602 1333 dbSNP
rs1362566772 1341 dbSNP
rs1236703136 1349 dbSNP
rs1325205476 1352 dbSNP
rs1438048356 1354 dbSNP
rs1396081561 1360 dbSNP
rs537921376 1364 dbSNP
rs1326109589 1368 dbSNP
rs148143380 1370 dbSNP
rs1172988311 1375 dbSNP
rs1247019490 1380 dbSNP
rs1003859568 1382 dbSNP
rs1015867863 1387 dbSNP
rs900454112 1402 dbSNP
rs141975568 1406 dbSNP
rs992999307 1412 dbSNP
rs191004578 1414 dbSNP
rs182230893 1416 dbSNP
rs568503595 1423 dbSNP
rs187186845 1430 dbSNP
rs979236719 1434 dbSNP
rs761880234 1438 dbSNP
rs934673801 1444 dbSNP
rs574561337 1449 dbSNP
rs751440911 1450 dbSNP
rs1193823053 1466 dbSNP
rs1372469988 1470 dbSNP
rs1424064962 1476 dbSNP
rs943953601 1477 dbSNP
rs1370713506 1480 dbSNP
rs1869435 1481 dbSNP
rs1354682943 1487 dbSNP
rs974252230 1490 dbSNP
rs921086181 1495 dbSNP
rs1375256243 1496 dbSNP
rs1172260304 1504 dbSNP
rs1331277337 1512 dbSNP
rs1375086611 1524 dbSNP
rs1443610396 1526 dbSNP
rs1181164779 1539 dbSNP
rs1034340323 1541 dbSNP
rs1252900293 1542 dbSNP
rs1178036216 1550 dbSNP
rs1480812607 1550 dbSNP
rs932443324 1554 dbSNP
rs959616844 1555 dbSNP
rs992824685 1557 dbSNP
rs917569860 1565 dbSNP
rs150698958 1588 dbSNP
rs1217749931 1590 dbSNP
rs191718158 1603 dbSNP
rs767178930 1609 dbSNP
rs1308647042 1612 dbSNP
rs140007853 1615 dbSNP
rs1391633629 1621 dbSNP
rs1355153422 1623 dbSNP
rs1311444021 1624 dbSNP
rs1417078025 1632 dbSNP
rs1318700292 1634 dbSNP
rs977821263 1635 dbSNP
rs534433436 1636 dbSNP
rs1451681954 1639 dbSNP
rs925044547 1643 dbSNP
rs752561462 1648 dbSNP
rs114089398 1672 dbSNP
rs1185514636 1673 dbSNP
rs1221985002 1678 dbSNP
rs116940361 1679 dbSNP
rs573660583 1680 dbSNP
rs1023157247 1681 dbSNP
rs544257243 1682 dbSNP
rs555904757 1683 dbSNP
rs554103327 1686 dbSNP
rs1291115778 1687 dbSNP
rs1477225045 1690 dbSNP
rs1235500511 1691 dbSNP
rs1170546918 1694 dbSNP
rs921669 1695 dbSNP
rs956083346 1696 dbSNP
rs1381045115 1697 dbSNP
rs1387147053 1699 dbSNP
rs1289520815 1704 dbSNP
rs371644961 1706 dbSNP
rs995559029 1707 dbSNP
rs911882694 1708 dbSNP
rs746307260 1711 dbSNP
rs560050437 1712 dbSNP
rs1368858182 1722 dbSNP
rs977058519 1723 dbSNP
rs1341156297 1737 dbSNP
rs1218125032 1745 dbSNP
rs113204519 1751 dbSNP
rs1025679917 1753 dbSNP
rs1336821653 1773 dbSNP
rs1270849730 1775 dbSNP
rs73369359 1777 dbSNP
rs1288870597 1778 dbSNP
rs1449671489 1781 dbSNP
rs1217437249 1782 dbSNP
rs1048193352 1783 dbSNP
rs1263500364 1784 dbSNP
rs1440228967 1785 dbSNP
rs909636557 1801 dbSNP
rs1487781577 1802 dbSNP
rs561095547 1803 dbSNP
rs146311362 1807 dbSNP
rs1391093104 1812 dbSNP
rs747371028 1830 dbSNP
rs974899808 1832 dbSNP
rs183494511 1837 dbSNP
rs1476471649 1841 dbSNP
rs1164346097 1842 dbSNP
rs768970112 1843 dbSNP
rs543635772 1845 dbSNP
rs1320489022 1856 dbSNP
rs1215112057 1868 dbSNP
rs533396289 1882 dbSNP
rs776899863 1885 dbSNP
rs1271924260 1893 dbSNP
rs906080282 1900 dbSNP
rs1000772782 1905 dbSNP
rs1361374215 1920 dbSNP
rs551787866 1922 dbSNP
rs1368807533 1926 dbSNP
rs757495117 1927 dbSNP
rs1296404766 1936 dbSNP
rs1357521193 1939 dbSNP
rs1245358269 1944 dbSNP
rs567216592 1949 dbSNP
rs1283551755 1952 dbSNP
rs907836603 1954 dbSNP
rs748383073 1959 dbSNP
rs940017132 1962 dbSNP
rs1398405040 1971 dbSNP
rs13259906 1972 dbSNP
rs773315562 1974 dbSNP
rs1411006094 1976 dbSNP
rs1194946047 1983 dbSNP
rs1478097643 1986 dbSNP
rs1018927769 1991 dbSNP
rs139617326 1994 dbSNP
rs966036870 1995 dbSNP
rs1179266594 2000 dbSNP
rs186948274 2003 dbSNP
rs974744767 2005 dbSNP
rs557845756 2007 dbSNP
rs958500931 2007 dbSNP
rs921189118 2008 dbSNP
rs1283153570 2010 dbSNP
rs1219860769 2017 dbSNP
rs1350092807 2020 dbSNP
rs1442507725 2025 dbSNP
rs750511925 2033 dbSNP
rs1444666330 2039 dbSNP
rs1237443777 2040 dbSNP
rs200548972 2044 dbSNP
rs537569286 2045 dbSNP
rs909710073 2046 dbSNP
rs1160798553 2049 dbSNP
rs1373535585 2051 dbSNP
rs1175483204 2059 dbSNP
rs939775316 2060 dbSNP
rs1381377332 2065 dbSNP
rs1156391750 2067 dbSNP
rs1407525744 2073 dbSNP
rs1419321645 2074 dbSNP
rs966983981 2078 dbSNP
rs1187658497 2083 dbSNP
rs999785553 2084 dbSNP
rs1260187000 2099 dbSNP
rs1446452438 2100 dbSNP
rs1282260739 2104 dbSNP
rs1377307612 2109 dbSNP
rs1330071345 2112 dbSNP
rs972495304 2122 dbSNP
rs1292960224 2130 dbSNP
rs1031971204 2133 dbSNP
rs1304470189 2135 dbSNP
rs1353364698 2135 dbSNP
rs957709811 2138 dbSNP
rs1344029485 2143 dbSNP
rs1396713072 2144 dbSNP
rs1315611301 2145 dbSNP
rs916972693 2149 dbSNP
rs556255449 2162 dbSNP
rs1163808284 2173 dbSNP
rs1044025431 2178 dbSNP
rs954567034 2185 dbSNP
rs1420501351 2190 dbSNP
rs1182890526 2199 dbSNP
rs987745540 2200 dbSNP
rs577303790 2205 dbSNP
rs116869310 2206 dbSNP
rs1465433120 2213 dbSNP
rs1055060823 2215 dbSNP
rs1237432529 2219 dbSNP
rs369673525 2224 dbSNP
rs891948743 2233 dbSNP
rs919899727 2237 dbSNP
rs1199357986 2245 dbSNP
rs1361165392 2247 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||| ||||   ||||||| 
Target 5' ggAUCCUCCUGCCUCAGCCUc 3'
 		5 - 25
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000501748.2 | 3UTR | CAAGGGAUCCUCCUGCCUCAGCCUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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