pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol KIAA1210   
Synonyms -
Description KIAA1210
Transcript NM_020721   
Expression
Putative miRNA Targets on KIAA1210
3'UTR of KIAA1210
(miRNA target sites are highlighted)
>KIAA1210|NM_020721|3'UTR
   1 AGAGCTCTTGTGTGGAGCATCAGCATTTATTTTATTTAGTTTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTCGCTCT
  81 GTTACCCAGATTGGAGTGCAGTGGCGCGATCTCCGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCACTCTCCCGCCT
 161 CAGTCTCCCGACTAGCTGGGACTACAGGCGCCCGCCATCACGCCCGGCTAATTTTGTTTTCGTATTTTTAGTAGAGACGG
 241 GGTTTCACCATGTTGGCCAGGATGGTCTTGATCTCCTGACCTCGTGATCCGCCCGCCTCAGCCTCCCAAAAGCTGGGATT
 321 ACAGGCGTGAGCCACCGCGCCCGGCCAAGCATCAGCGTTTTAAATGATAATTGCTAATAGCTGTATTAATTCTATGTAGT
 401 GATCTTTTTACTGTGACCACTTGTATTAAGCAAAATAAGTATTAAGCAAACTAAGAATTTATTAAGCAAAATAAGAATTT
 481 ATTAAGCAAAATAGCCTTAGAAATGCAAATTAAAACATAATTATTTGAATGAAATAAATGCCATGAATGCTTAACCTTCC
 561 ACGTAGTCACTGCCAGCACCCAGAAACCCAGCATTTCCTCTATTAAAACTATCGAAAACATTTGCACTGCTGTAAAATTG
 641 CAAAATCTTTAACTTTGGACAATGTGCTTTAGAAGGGAGAAAGCAAAAACATTTTGTTGGAGCAACTAGAAAATTGTCAT
 721 TTCCCTCAACCAAATAAAGTAATTCTAATGGAAACATTCAGATGATTTGACCTAAAGATTGGCCTTTAGGTTTTATGAGC
 801 CTAGATAGATGCCGCAATTATTTGGTTGTTGCTCTAAGCTTTGCAAGGGATCCTAAAAGAGGCGGTGGAAGTGAAAATTC
 881 TGGGTCTCCAAGAAAATTTCTGCACAGCCAGTTCTCCAATCAGCCTATCACCCCTTGAAACATCTTCCCTGTGTCCCTGG
 961 GGGCCCCTGATGCTTTCTCCTTGGGTGATAGTAACATGCAGAGCACTTACACAAAGCTCCCTCTTTGGACATACCCCACG
1041 TCGACCTGTCACAGGCCTGGCTGTAGCGAGCACCTCCCTATGACGCAGAATGCTTCTTGGGAATTATCTTACTCCTCTGG
1121 AGGGTTAGTCCATCAATGTTTTGCTTCTTGTCCCAATACTACTGTGACCCTCTCTGATCGCACAGAAATCACTGCCTATC
1201 ACATATATCCTGTTAAGCACTGAAGACCCTATTGAAATTAGAGTTCTACAGATGCCAAAAGCTGTACTTTCCATCAGGCA
1281 GATGGCAAGCTTACTGCCTTGATGCACATCTGGAGCCACTGGAGCTCCTTCCTCTCTGGTTCCAGCATTAAGGTGGAGAA
1361 CTCCATGTAGCTTCTTGTCCTTTCCCCTCAGCTGTCTTTGCTTCACAAGGTTTTAGCCCAAAGCAAGAGTGCAATCCCAA
1441 AGCCACAGAGAAATGAACTTTCCGCTACCTGGAAGCTTTAAGTGAGTAAATCAGCTTTTCCCCTCTCATTCCTAGAGGCA
1521 CACACCTCAAAAGTTACTAGGCTGGAGAGACCCTACCTTCCAGTGACCCACTCATCCCCCAGCCACGGAGAAGAGGGAAG
1601 ACCAAAAAGGGAGAGTGAGAAAGAGGATGAGAGGGATGGTCAGCTGTGAGGGGAGGGGGCAAGTGGCCCAGCAAATGTTG
1681 ATGCCTCCCTTCCCATCTTGCCACACGGTCTTTTTCTTTTGTAGCACAGCCTCCATTAATAACTCCTCGGCTGAGGATGA
1761 AGATGTAGGCACCTTTACCCCCAGAGCCAGTTCCTTAATTGGCTGGCTTTCTGAGATGCAGACCACCCTAGAATCTCATC
1841 TAGGTTCACTAGAAGTTAGTTAAATCTTCCTTTCTCTGTCTTTCTCTTCATTCCATCCCCCAAACCCACCAAACACTAAG
1921 GGAGAGCTCCCTTTGGATGTCTGGGCAGTAAACCTAGCTCATTTTTCTAGGAGACCCAGAAGTGACTTCTGAGTAGTTAT
2001 CACTGTGTCTGCCTCTGTTACACTGTGCTGCTTTGCTTAAACAGAAATGCAGGCCTGGACATCTGACTGTGCCTTTATAT
2081 TCTGAGTGGGGTGCTGCCCCATGCAAAAAAATCCAGAGAGGTAGTGAGGTGTCAGAGCTAAACACTTGGTGCTGGGTTTT
2161 GTTGATGCTGGTATAATGTGACACAGTACAATTACATGCTAAATTTTGCATTTTCTCTATATAACATCTATTTTTCCTGA
2241 TACTGTGCCTTTGCCATTTTGATAATGCTATTTTGATTGAGTGAATTTTATTTCCTTTGTATTCCCATAGTGAACAATAT
2321 ATTAAGGTAGATGCCCTTTATCTGGGTACTCCTGGTAGATTAGCTGTTACACCTCCCTTCCCTTTTTTACAGTGAACCTG
2401 TATTCAGTTATTGTCACTCTGAGAACTCTCCAATAACAATTTCTTTTCCACAGTTAACAACACAGCTGTTACACCTCCCT
2481 TCCTTTTTTTCACAGTGAACCTGTATTCAGCTATTCTCACTCTGAGAACTCTCCAATAACAATTTCTTTTCCACAGTTAA
2561 CAACAAAGTTCTGTTTTTAAATGAAGAGATTAAGTTCTTTTTAAATGCCTAAAGGCATATTCTGACAACTTTTCTACTTC
2641 TTTAACTTTTTTGATTTAAGATATATGCAAAGCAAATAAATTCAATAAAGCCTAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucGGUCGGUUGAGUGUCACGUCu 5'
            ::| |||: |:: ||||||| 
Target 5' tgTTACCCAGATTGGAGTGCAGt 3'
80 - 102 161.00 -17.20
2
miRNA  3' ucGGUC-GGUUGAG-UGUCACGUcu 5'
            ::|| ||||  | | ||||||  
Target 5' ttTTAGCCCAAAGCAAGAGTGCAat 3'
1411 - 1435 137.00 -14.00
3
miRNA  3' ucGGUCGGUUGAGUG--UC-ACGUCu 5'
            :::||:::||: |  || ||||| 
Target 5' aaTTGGCTGGCTTTCTGAGATGCAGa 3'
1797 - 1822 127.00 -18.70
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1230481874 1 dbSNP
rs184187725 5 dbSNP
rs770952247 17 dbSNP
rs1376866965 23 dbSNP
rs1476960596 24 dbSNP
rs1041290283 25 dbSNP
rs755756915 27 dbSNP
rs747072312 29 dbSNP
rs762562695 30 dbSNP
rs748661545 34 dbSNP
rs866139825 35 dbSNP
rs745438522 38 dbSNP
rs755304007 38 dbSNP
rs757705673 39 dbSNP
rs780693097 39 dbSNP
rs879237701 39 dbSNP
rs376218437 40 dbSNP
rs753083591 40 dbSNP
rs753502463 40 dbSNP
rs764392260 40 dbSNP
rs765625208 40 dbSNP
rs1048399460 41 dbSNP
rs1491399510 41 dbSNP
rs759821109 41 dbSNP
rs34785358 42 dbSNP
rs776589669 42 dbSNP
rs1310434738 44 dbSNP
rs1310604115 45 dbSNP
rs766416107 45 dbSNP
rs766149150 47 dbSNP
rs761688867 48 dbSNP
rs755879239 49 dbSNP
rs749921112 50 dbSNP
rs1458709783 61 dbSNP
rs10714793 63 dbSNP
rs1238679346 63 dbSNP
rs1283292611 63 dbSNP
rs1357959097 63 dbSNP
rs1429052899 63 dbSNP
rs1491106416 63 dbSNP
rs771640744 63 dbSNP
rs774882310 63 dbSNP
rs1270787952 64 dbSNP
rs1439040575 64 dbSNP
rs1491127439 64 dbSNP
rs1162878581 65 dbSNP
rs1458536608 65 dbSNP
rs199760859 72 dbSNP
rs192696948 75 dbSNP
rs1376754521 76 dbSNP
rs1445239651 77 dbSNP
rs1306366992 84 dbSNP
rs1341734029 90 dbSNP
rs187736216 91 dbSNP
rs918658982 92 dbSNP
rs1264469812 97 dbSNP
rs1353867617 99 dbSNP
rs1200259365 100 dbSNP
rs772360075 106 dbSNP
rs759817111 107 dbSNP
rs1230333708 108 dbSNP
rs1457219708 113 dbSNP
rs1196670185 115 dbSNP
rs1258250224 123 dbSNP
rs927754355 130 dbSNP
rs1186985307 133 dbSNP
rs376072164 137 dbSNP
rs969252518 138 dbSNP
rs1023519710 140 dbSNP
rs1478939272 141 dbSNP
rs1171766639 145 dbSNP
rs989093279 146 dbSNP
rs1464450084 150 dbSNP
rs957723790 156 dbSNP
rs1030703749 157 dbSNP
rs1379174030 164 dbSNP
rs182306116 169 dbSNP
rs1324012735 170 dbSNP
rs770897459 171 dbSNP
rs372881706 172 dbSNP
rs369101504 183 dbSNP
rs749412145 185 dbSNP
rs1023638503 186 dbSNP
rs1000213295 189 dbSNP
rs367944230 190 dbSNP
rs1278528609 192 dbSNP
rs1317056560 193 dbSNP
rs1395429751 194 dbSNP
rs904543306 198 dbSNP
rs1483556730 199 dbSNP
rs1199896969 201 dbSNP
rs772987230 204 dbSNP
rs1020159452 205 dbSNP
rs1013169231 206 dbSNP
rs1407065622 208 dbSNP
rs1007074466 212 dbSNP
rs769775913 222 dbSNP
rs1057337657 233 dbSNP
rs1441512907 239 dbSNP
rs190683766 240 dbSNP
rs1301691458 250 dbSNP
rs931302005 252 dbSNP
rs1192409294 255 dbSNP
rs1401371765 273 dbSNP
rs187750732 276 dbSNP
rs897603894 283 dbSNP
rs1248030094 290 dbSNP
rs1213299504 295 dbSNP
rs1037473329 296 dbSNP
rs1218232988 297 dbSNP
rs941733011 305 dbSNP
rs1037043213 312 dbSNP
rs1232453446 312 dbSNP
rs938726363 313 dbSNP
rs910228293 317 dbSNP
rs986162411 326 dbSNP
rs754836474 327 dbSNP
rs1217495205 332 dbSNP
rs1262703420 336 dbSNP
rs1284072234 338 dbSNP
rs12391835 340 dbSNP
rs762564343 342 dbSNP
rs1356414217 343 dbSNP
rs183062841 345 dbSNP
rs947917748 351 dbSNP
rs1359449597 355 dbSNP
rs774997388 356 dbSNP
rs916479785 363 dbSNP
rs1368039881 366 dbSNP
rs112292937 368 dbSNP
rs1368400326 375 dbSNP
rs988015164 396 dbSNP
rs957691519 405 dbSNP
rs1031047477 413 dbSNP
rs956556646 421 dbSNP
rs1428957076 426 dbSNP
rs1344362784 444 dbSNP
rs1159514113 451 dbSNP
rs977785894 456 dbSNP
rs1032104537 457 dbSNP
rs1285425922 465 dbSNP
rs1421311387 471 dbSNP
rs1342462495 481 dbSNP
rs1393132995 486 dbSNP
rs1276339828 494 dbSNP
rs965473705 515 dbSNP
rs1488346703 517 dbSNP
rs1019390285 527 dbSNP
rs749979153 531 dbSNP
rs978820998 532 dbSNP
rs1007454410 540 dbSNP
rs764437231 541 dbSNP
rs1172945103 551 dbSNP
rs954235104 555 dbSNP
rs1454331278 562 dbSNP
rs1027232352 563 dbSNP
rs1398521709 564 dbSNP
rs1166461017 567 dbSNP
rs995724939 568 dbSNP
rs1426734839 569 dbSNP
rs1184388154 578 dbSNP
rs1022959686 579 dbSNP
rs1242366858 590 dbSNP
rs1013326704 597 dbSNP
rs960349379 599 dbSNP
rs1217738359 600 dbSNP
rs191261433 609 dbSNP
rs1313670938 611 dbSNP
rs1489481880 613 dbSNP
rs186099901 614 dbSNP
rs1260415252 617 dbSNP
rs767986239 619 dbSNP
rs1198570552 626 dbSNP
rs1036336261 627 dbSNP
rs1468133515 628 dbSNP
rs993743032 629 dbSNP
rs898009065 631 dbSNP
rs1422900952 632 dbSNP
rs1312832524 633 dbSNP
rs1002887803 637 dbSNP
rs1037840626 642 dbSNP
rs1005978861 651 dbSNP
rs375171017 657 dbSNP
rs1352731214 660 dbSNP
rs760029370 671 dbSNP
rs1284879488 675 dbSNP
rs1050125218 691 dbSNP
rs1299047394 693 dbSNP
rs1280410396 696 dbSNP
rs907267198 706 dbSNP
rs41301489 718 dbSNP
rs1044509591 729 dbSNP
rs1373471973 733 dbSNP
rs769362550 739 dbSNP
rs766659235 749 dbSNP
rs1237560459 755 dbSNP
rs1482685384 759 dbSNP
rs1185337680 761 dbSNP
rs1425398402 769 dbSNP
rs181587897 777 dbSNP
rs1360362415 795 dbSNP
rs191175891 805 dbSNP
rs769823533 808 dbSNP
rs1427427218 811 dbSNP
rs745475512 811 dbSNP
rs978150748 813 dbSNP
rs1195400788 814 dbSNP
rs1479003902 816 dbSNP
rs1255919328 847 dbSNP
rs1413078073 856 dbSNP
rs186371647 863 dbSNP
rs1483887896 864 dbSNP
rs114927367 868 dbSNP
rs780898973 869 dbSNP
rs953785398 889 dbSNP
rs1306999467 910 dbSNP
rs1405338880 921 dbSNP
rs1279076461 926 dbSNP
rs1027117099 933 dbSNP
rs776593071 934 dbSNP
rs1278617572 947 dbSNP
rs968809437 948 dbSNP
rs1353311023 961 dbSNP
rs995694429 963 dbSNP
rs1396417812 965 dbSNP
rs1404197595 966 dbSNP
rs961901758 971 dbSNP
rs1296394767 972 dbSNP
rs1015875035 973 dbSNP
rs768415015 982 dbSNP
rs1478927154 1005 dbSNP
rs1173080279 1020 dbSNP
rs1424440362 1027 dbSNP
rs1432915294 1029 dbSNP
rs747017221 1042 dbSNP
rs1361352732 1052 dbSNP
rs1044866846 1066 dbSNP
rs565997462 1067 dbSNP
rs1172356099 1068 dbSNP
rs1010850677 1069 dbSNP
rs1053525879 1071 dbSNP
rs1274753604 1076 dbSNP
rs1369481485 1078 dbSNP
rs936539038 1084 dbSNP
rs1035669449 1085 dbSNP
rs1353893138 1095 dbSNP
rs923837139 1101 dbSNP
rs1281781385 1108 dbSNP
rs962251182 1111 dbSNP
rs1424773013 1113 dbSNP
rs1016482039 1133 dbSNP
rs1258792783 1134 dbSNP
rs1176054423 1135 dbSNP
rs1381009345 1137 dbSNP
rs1006379686 1142 dbSNP
rs1339755984 1151 dbSNP
rs888890337 1156 dbSNP
rs181834280 1165 dbSNP
rs1050616022 1174 dbSNP
rs1323335826 1177 dbSNP
rs777676527 1179 dbSNP
rs189236288 1180 dbSNP
rs901514038 1200 dbSNP
rs985127614 1209 dbSNP
rs3747383 1211 dbSNP
rs919689574 1212 dbSNP
rs974224836 1229 dbSNP
rs1210167384 1231 dbSNP
rs745311008 1252 dbSNP
rs925192942 1255 dbSNP
rs1467034244 1261 dbSNP
rs1200453099 1262 dbSNP
rs1342050808 1268 dbSNP
rs961590034 1270 dbSNP
rs185932128 1278 dbSNP
rs1238780488 1285 dbSNP
rs1418557753 1294 dbSNP
rs1043570251 1298 dbSNP
rs6603475 1302 dbSNP
rs1473256407 1308 dbSNP
rs376819835 1331 dbSNP
rs753236801 1338 dbSNP
rs768163852 1340 dbSNP
rs1438119020 1357 dbSNP
rs148217685 1358 dbSNP
rs960119516 1359 dbSNP
rs1458728577 1365 dbSNP
rs751962894 1377 dbSNP
rs1326311009 1378 dbSNP
rs928631017 1386 dbSNP
rs761104927 1387 dbSNP
rs1245077058 1400 dbSNP
rs1292369243 1401 dbSNP
rs145802280 1419 dbSNP
rs1220291588 1425 dbSNP
rs1370618090 1426 dbSNP
rs1157526015 1431 dbSNP
rs972058787 1441 dbSNP
rs1194091543 1461 dbSNP
rs1012887409 1463 dbSNP
rs750757086 1464 dbSNP
rs113349709 1480 dbSNP
rs1416018975 1481 dbSNP
rs1001106086 1484 dbSNP
rs1171864542 1492 dbSNP
rs768141228 1501 dbSNP
rs1042623712 1502 dbSNP
rs181297838 1521 dbSNP
rs1252540969 1523 dbSNP
rs1165589969 1524 dbSNP
rs1403719357 1530 dbSNP
rs1414931949 1534 dbSNP
rs765270813 1536 dbSNP
rs985016356 1537 dbSNP
rs1358189699 1543 dbSNP
rs1258796592 1551 dbSNP
rs1306781436 1552 dbSNP
rs1414062634 1553 dbSNP
rs761927296 1555 dbSNP
rs891055980 1557 dbSNP
rs762368154 1562 dbSNP
rs776500902 1565 dbSNP
rs1311391162 1566 dbSNP
rs919657213 1576 dbSNP
rs1255618237 1582 dbSNP
rs1489404320 1583 dbSNP
rs112748559 1586 dbSNP
rs1323791221 1587 dbSNP
rs1261481267 1591 dbSNP
rs1427181818 1596 dbSNP
rs759152203 1598 dbSNP
rs901590496 1599 dbSNP
rs1434767419 1612 dbSNP
rs776343016 1635 dbSNP
rs1287442438 1637 dbSNP
rs999134785 1651 dbSNP
rs908675341 1659 dbSNP
rs903804286 1660 dbSNP
rs1419499732 1663 dbSNP
rs145306011 1665 dbSNP
rs1303275426 1668 dbSNP
rs1331638512 1675 dbSNP
rs1233591953 1680 dbSNP
rs1160982458 1687 dbSNP
rs971647409 1688 dbSNP
rs1217622661 1690 dbSNP
rs7062626 1706 dbSNP
rs148892485 1707 dbSNP
rs957409642 1717 dbSNP
rs1268622407 1722 dbSNP
rs894982398 1725 dbSNP
rs771817453 1727 dbSNP
rs1192397837 1742 dbSNP
rs1033052093 1748 dbSNP
rs998919097 1749 dbSNP
rs938806385 1755 dbSNP
rs1344278451 1765 dbSNP
rs903269198 1773 dbSNP
rs189839571 1778 dbSNP
rs1020763703 1780 dbSNP
rs778467393 1782 dbSNP
rs1440092894 1783 dbSNP
rs909181837 1787 dbSNP
rs985046034 1796 dbSNP
rs1224457259 1805 dbSNP
rs891037036 1811 dbSNP
rs184484182 1824 dbSNP
rs1315388062 1826 dbSNP
rs1049696771 1834 dbSNP
rs1266418954 1848 dbSNP
rs976268343 1849 dbSNP
rs1240624871 1855 dbSNP
rs932301755 1866 dbSNP
rs898197233 1870 dbSNP
rs1406723735 1882 dbSNP
rs1416951033 1902 dbSNP
rs1038050442 1904 dbSNP
rs939744754 1905 dbSNP
rs192017735 1906 dbSNP
rs999209063 1916 dbSNP
rs1234819035 1920 dbSNP
rs1402425699 1926 dbSNP
rs748841950 1935 dbSNP
rs189427984 1937 dbSNP
rs1297704265 1945 dbSNP
rs1371386310 1959 dbSNP
rs1230244824 1961 dbSNP
rs950291237 1967 dbSNP
rs1021882867 1971 dbSNP
rs1334588107 1976 dbSNP
rs1294428961 1977 dbSNP
rs777480439 1978 dbSNP
rs916162898 1994 dbSNP
rs1399715200 1995 dbSNP
rs1361651377 1996 dbSNP
rs1438918433 2006 dbSNP
rs991737843 2009 dbSNP
rs755559273 2010 dbSNP
rs1204534983 2032 dbSNP
rs1300573019 2049 dbSNP
rs957628151 2058 dbSNP
rs1479408372 2062 dbSNP
rs1183230213 2071 dbSNP
rs895061984 2087 dbSNP
rs1257853115 2101 dbSNP
rs1474742036 2103 dbSNP
rs772031673 2110 dbSNP
rs1410476547 2112 dbSNP
rs1425627564 2112 dbSNP
rs939187208 2112 dbSNP
rs1352824672 2120 dbSNP
rs748073833 2126 dbSNP
rs1313678736 2137 dbSNP
rs1413267311 2153 dbSNP
rs1280502760 2155 dbSNP
rs1340590636 2156 dbSNP
rs752064311 2159 dbSNP
rs778912863 2163 dbSNP
rs967459805 2171 dbSNP
rs377731977 2177 dbSNP
rs1008044051 2184 dbSNP
rs145567107 2185 dbSNP
rs1028234781 2189 dbSNP
rs1485154421 2196 dbSNP
rs996731794 2198 dbSNP
rs932259515 2202 dbSNP
rs1475657838 2215 dbSNP
rs898418026 2216 dbSNP
rs922194124 2217 dbSNP
rs755076363 2221 dbSNP
rs1416204379 2228 dbSNP
rs1004297047 2240 dbSNP
rs758731762 2243 dbSNP
rs1174362090 2266 dbSNP
rs886847076 2270 dbSNP
rs1433094943 2282 dbSNP
rs1045912689 2299 dbSNP
rs111786262 2310 dbSNP
rs1481001157 2324 dbSNP
rs1327371747 2329 dbSNP
rs184768964 2351 dbSNP
rs1268904946 2358 dbSNP
rs1055893737 2379 dbSNP
rs1370405455 2390 dbSNP
rs1235792458 2413 dbSNP
rs936234435 2421 dbSNP
rs924084242 2426 dbSNP
rs1208274313 2433 dbSNP
rs1285971073 2434 dbSNP
rs1447332712 2447 dbSNP
rs926220826 2456 dbSNP
rs1214842867 2462 dbSNP
rs761839449 2463 dbSNP
rs1441728134 2464 dbSNP
rs1455540949 2468 dbSNP
rs1194264317 2476 dbSNP
rs753919083 2491 dbSNP
rs1452718133 2505 dbSNP
rs977436879 2511 dbSNP
rs967807050 2516 dbSNP
rs1400453119 2518 dbSNP
rs1316714592 2521 dbSNP
rs1279268166 2529 dbSNP
rs1442292754 2536 dbSNP
rs1303403218 2547 dbSNP
rs911976840 2564 dbSNP
rs987993857 2574 dbSNP
rs953449539 2583 dbSNP
rs1011909262 2587 dbSNP
rs959582565 2590 dbSNP
rs1350970277 2594 dbSNP
rs1218930096 2599 dbSNP
rs1028120276 2602 dbSNP
rs1341500916 2608 dbSNP
rs1280537870 2615 dbSNP
rs1034961021 2618 dbSNP
rs1413358630 2625 dbSNP
rs1003839527 2630 dbSNP
rs1252349144 2637 dbSNP
rs1467171456 2638 dbSNP
rs1184119016 2653 dbSNP
rs1340342415 2664 dbSNP
rs896996364 2685 dbSNP
rs1036824485 2687 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ucggucGGUUGAGUGUCACGUCu 5'
                |||: |:: ||||||| 
Target 5' -----cCCAGAUUGGAGUGCAGu 3'
1 - 18
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903829
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_a
Location of target site NM_020721 | 3UTR | CCCAGAUUGGAGUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903830
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_b
Location of target site NM_020721 | 3UTR | CCCAGAUUGGAGUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903831
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_a
Location of target site NM_020721 | 3UTR | CCAGAUUGGAGUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_020721 | 3UTR | UCUGUUACCCAGAUUGGAGUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_020721 | 3UTR | CCAGAUUGGAGUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000402510.2 | 3UTR | CCCAGAUUGGAGUGCAGUGGCGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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