pre-miRNA Information
pre-miRNA hsa-mir-3689d-1   
Genomic Coordinates chr9: 134849609 - 134849682
Description Homo sapiens miR-3689d-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3689d-2   
Genomic Coordinates chr9: 134850277 - 134850356
Description Homo sapiens miR-3689d-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3689d
Sequence 2| GGGAGGUGUGAUCUCACACUCG |23
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs551722268 8 dbSNP
rs143142996 8 dbSNP
rs1236297052 12 dbSNP
rs573148947 14 dbSNP
rs1210004979 14 dbSNP
rs1217460444 14 dbSNP
rs762590109 18 dbSNP
rs574332265 18 dbSNP
rs1164353021 21 dbSNP
rs963741171 21 dbSNP
rs1177416877 22 dbSNP
rs765777344 22 dbSNP
Putative Targets

Gene Information
Gene Symbol PGBD4   
Synonyms -
Description piggyBac transposable element derived 4
Transcript NM_152595   
Expression
Putative miRNA Targets on PGBD4
3'UTR of PGBD4
(miRNA target sites are highlighted)
>PGBD4|NM_152595|3'UTR
   1 ATACCGATCATCATACACATCTGTTCCATTAGGATTAGAGACAAGTTCTGTTTAGAAATAACTCCAAGATTGGGAGGCCG
  81 ACCTGGGTGGATCACCTGAGA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gcuCACACUCUAGUGUGGAggg 5'
             | ||| |||  |||||   
Target 5' cctGGGTG-GAT--CACCTgag 3'
82 - 100 114.00 -11.10
2
miRNA  3' gcucAC-ACUCUAGUGUGGAGGg 5'
              || | |||  |:| |||| 
Target 5' gttcTGTTTAGA-AATAACTCCa 3'
45 - 66 105.00 -11.20
3
miRNA  3' gcucacacucUAG--UGUGGAGGg 5'
                    |||  |||| ||: 
Target 5' -ataccgatcATCATACACATCTg 3'
1 - 23 102.00 -7.63
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30481435 13 COSMIC
COSN30459200 80 COSMIC
COSN28566334 105 COSMIC
COSN15625832 424 COSMIC
COSN21114782 445 COSMIC
COSN22332279 577 COSMIC
COSN29724281 776 COSMIC
COSN15625834 825 COSMIC
COSN15625835 1066 COSMIC
COSN26551205 1145 COSMIC
COSN26641663 1664 COSMIC
COSN26642695 1681 COSMIC
COSN32040198 2126 COSMIC
COSN24015108 2134 COSMIC
COSN23846590 2361 COSMIC
COSN28217482 2609 COSMIC
COSN19346276 2694 COSMIC
COSN26143992 2830 COSMIC
COSN29385613 3072 COSMIC
COSN8172724 3383 COSMIC
COSN23507748 3653 COSMIC
COSN29281373 4024 COSMIC
COSN15299763 4025 COSMIC
COSN16160867 4037 COSMIC
COSN29643765 4051 COSMIC
COSN6271168 4259 COSMIC
rs9972552 424 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs939045397 2 dbSNP
rs1359419705 4 dbSNP
rs759305834 6 dbSNP
rs772013199 7 dbSNP
rs1455503527 11 dbSNP
rs1396578140 15 dbSNP
rs775396137 17 dbSNP
rs774021041 23 dbSNP
rs1243178979 26 dbSNP
rs1365508696 27 dbSNP
rs760811326 31 dbSNP
rs746323883 34 dbSNP
rs1222736205 41 dbSNP
rs370727329 43 dbSNP
rs374109895 46 dbSNP
rs765463051 47 dbSNP
rs1248891107 51 dbSNP
rs919392475 56 dbSNP
rs545715424 59 dbSNP
rs1049761047 71 dbSNP
rs888063994 77 dbSNP
rs143215981 80 dbSNP
rs769515401 81 dbSNP
rs1354974122 82 dbSNP
rs911643983 84 dbSNP
rs944186139 85 dbSNP
rs1296487831 86 dbSNP
rs1432557546 94 dbSNP
rs1372915169 101 dbSNP
rs976934191 117 dbSNP
rs1388554072 120 dbSNP
rs918774828 130 dbSNP
rs1462623262 132 dbSNP
rs1372709600 135 dbSNP
rs1186929030 144 dbSNP
rs531220148 163 dbSNP
rs1254040391 165 dbSNP
rs1049157064 171 dbSNP
rs549791588 172 dbSNP
rs138143662 181 dbSNP
rs1197018815 185 dbSNP
rs1339493891 186 dbSNP
rs888415282 189 dbSNP
rs997521211 192 dbSNP
rs1225764169 199 dbSNP
rs1349725569 207 dbSNP
rs775071841 208 dbSNP
rs1303850025 212 dbSNP
rs948039574 219 dbSNP
rs1045152748 223 dbSNP
rs1391983120 227 dbSNP
rs906631279 227 dbSNP
rs1395874708 229 dbSNP
rs1166890249 230 dbSNP
rs1004062033 237 dbSNP
rs1395959510 239 dbSNP
rs547995886 244 dbSNP
rs62014728 247 dbSNP
rs1221820557 250 dbSNP
rs1365998221 251 dbSNP
rs892331605 261 dbSNP
rs540108112 264 dbSNP
rs956720492 269 dbSNP
rs1479270264 291 dbSNP
rs1198010467 298 dbSNP
rs1486431394 298 dbSNP
rs1412088430 301 dbSNP
rs1342633530 302 dbSNP
rs1022175305 307 dbSNP
rs1009425412 311 dbSNP
rs1022618547 314 dbSNP
rs953009016 314 dbSNP
rs1473821095 326 dbSNP
rs1007198470 348 dbSNP
rs1376275312 349 dbSNP
rs1018620934 350 dbSNP
rs536570432 350 dbSNP
rs972264481 350 dbSNP
rs568306409 352 dbSNP
rs918756313 352 dbSNP
rs78013925 354 dbSNP
rs1406355852 355 dbSNP
rs558492143 357 dbSNP
rs768354451 358 dbSNP
rs1179369497 359 dbSNP
rs1325975617 359 dbSNP
rs1257694820 362 dbSNP
rs370738215 379 dbSNP
rs375375080 380 dbSNP
rs1286055695 381 dbSNP
rs910156336 387 dbSNP
rs1328379367 395 dbSNP
rs569991998 400 dbSNP
rs1235143992 401 dbSNP
rs1352476219 402 dbSNP
rs1356192893 415 dbSNP
rs62014729 420 dbSNP
rs9972552 424 dbSNP
rs919037059 426 dbSNP
rs939447210 434 dbSNP
rs1319364093 439 dbSNP
rs1457097825 444 dbSNP
rs1349644862 447 dbSNP
rs1228634155 450 dbSNP
rs929452938 452 dbSNP
rs1293700925 453 dbSNP
rs1489688936 460 dbSNP
rs182491941 461 dbSNP
rs909453504 465 dbSNP
rs1221291493 467 dbSNP
rs865990665 468 dbSNP
rs1039269106 483 dbSNP
rs901822082 484 dbSNP
rs1251906818 496 dbSNP
rs1439109266 502 dbSNP
rs767253036 505 dbSNP
rs933340682 511 dbSNP
rs1464278494 512 dbSNP
rs541159348 516 dbSNP
rs1335506390 518 dbSNP
rs1289203413 524 dbSNP
rs1226729664 529 dbSNP
rs1271058171 530 dbSNP
rs1434738778 538 dbSNP
rs891906072 547 dbSNP
rs1043599280 552 dbSNP
rs1165794029 557 dbSNP
rs773166147 558 dbSNP
rs531780306 561 dbSNP
rs1009805036 566 dbSNP
rs1163449692 579 dbSNP
rs760541327 581 dbSNP
rs903698316 584 dbSNP
rs1168854634 585 dbSNP
rs765313304 586 dbSNP
rs1002095010 587 dbSNP
rs1007455252 592 dbSNP
rs1018563669 599 dbSNP
rs1246112747 600 dbSNP
rs1033616229 620 dbSNP
rs1309336802 626 dbSNP
rs553515501 627 dbSNP
rs993228970 632 dbSNP
rs141254131 648 dbSNP
rs1026475206 649 dbSNP
rs1316814196 650 dbSNP
rs984304258 653 dbSNP
rs1357099937 658 dbSNP
rs545654138 661 dbSNP
rs867038997 662 dbSNP
rs1274955048 666 dbSNP
rs969612403 667 dbSNP
rs981061533 671 dbSNP
rs1308219852 672 dbSNP
rs1428672567 672 dbSNP
rs909348238 679 dbSNP
rs758613511 683 dbSNP
rs927980686 697 dbSNP
rs1433625731 705 dbSNP
rs1424293323 709 dbSNP
rs943552383 719 dbSNP
rs564218094 723 dbSNP
rs1481628875 724 dbSNP
rs939358412 729 dbSNP
rs1249223322 731 dbSNP
rs974941790 732 dbSNP
rs113330715 733 dbSNP
rs933309267 740 dbSNP
rs1241669713 749 dbSNP
rs763549648 755 dbSNP
rs543029106 757 dbSNP
rs114357977 758 dbSNP
rs1043527680 766 dbSNP
rs888987471 766 dbSNP
rs1226010527 767 dbSNP
rs1374749430 777 dbSNP
rs1374963699 778 dbSNP
rs1288405819 790 dbSNP
rs528948049 792 dbSNP
rs1368311841 794 dbSNP
rs1040275150 806 dbSNP
rs947463084 811 dbSNP
rs1043549364 814 dbSNP
rs1403010866 826 dbSNP
rs1358383575 830 dbSNP
rs1173815356 834 dbSNP
rs903667038 835 dbSNP
rs1420770008 845 dbSNP
rs564986198 852 dbSNP
rs1002062519 858 dbSNP
rs1471656150 862 dbSNP
rs1033583661 863 dbSNP
rs901469555 869 dbSNP
rs896439271 874 dbSNP
rs1013667922 889 dbSNP
rs1483106585 890 dbSNP
rs1380282079 901 dbSNP
rs150757872 911 dbSNP
rs1298085227 912 dbSNP
rs1318035011 912 dbSNP
rs1288342455 914 dbSNP
rs950441668 920 dbSNP
rs1026032998 923 dbSNP
rs1250261832 941 dbSNP
rs1345181210 944 dbSNP
rs548409461 947 dbSNP
rs1396277886 969 dbSNP
rs764445075 974 dbSNP
rs566230231 979 dbSNP
rs1261858643 985 dbSNP
rs1300838560 986 dbSNP
rs964829499 991 dbSNP
rs1389207713 993 dbSNP
rs1158356342 1000 dbSNP
rs1455667994 1013 dbSNP
rs974909234 1015 dbSNP
rs1188384301 1017 dbSNP
rs923515910 1023 dbSNP
rs1005995430 1026 dbSNP
rs1189559542 1035 dbSNP
rs1017113984 1045 dbSNP
rs1264316749 1049 dbSNP
rs367740043 1067 dbSNP
rs1207413982 1071 dbSNP
rs1192832488 1075 dbSNP
rs1266662655 1079 dbSNP
rs186818346 1080 dbSNP
rs1481490369 1084 dbSNP
rs1174403812 1088 dbSNP
rs1403748607 1089 dbSNP
rs1383650543 1092 dbSNP
rs1035686052 1095 dbSNP
rs913205441 1096 dbSNP
rs947396443 1117 dbSNP
rs781653247 1118 dbSNP
rs55816157 1119 dbSNP
rs1163897076 1131 dbSNP
rs1457528986 1132 dbSNP
rs1043130223 1142 dbSNP
rs1366868584 1147 dbSNP
rs927392385 1147 dbSNP
rs937819791 1167 dbSNP
rs1450423547 1173 dbSNP
rs1247830562 1175 dbSNP
rs960718062 1179 dbSNP
rs552043939 1187 dbSNP
rs192395576 1188 dbSNP
rs946799574 1189 dbSNP
rs1224771816 1198 dbSNP
rs1355058301 1202 dbSNP
rs979520132 1203 dbSNP
rs1013469212 1205 dbSNP
rs1048119841 1219 dbSNP
rs1230203299 1225 dbSNP
rs1280838046 1225 dbSNP
rs1296571320 1229 dbSNP
rs1323381184 1232 dbSNP
rs1209913864 1235 dbSNP
rs943207344 1237 dbSNP
rs373658769 1239 dbSNP
rs537774277 1240 dbSNP
rs576982772 1253 dbSNP
rs1204754341 1258 dbSNP
rs371780346 1259 dbSNP
rs1389832628 1276 dbSNP
rs1015951965 1292 dbSNP
rs1167081725 1297 dbSNP
rs1455902194 1300 dbSNP
rs901769262 1303 dbSNP
rs1378664031 1306 dbSNP
rs1198810022 1307 dbSNP
rs1450500305 1308 dbSNP
rs1197287995 1315 dbSNP
rs746379071 1324 dbSNP
rs114785009 1325 dbSNP
rs1483172425 1327 dbSNP
rs996297363 1334 dbSNP
rs567665206 1348 dbSNP
rs1030415949 1349 dbSNP
rs779780005 1354 dbSNP
rs955060797 1355 dbSNP
rs887492567 1356 dbSNP
rs1365300682 1360 dbSNP
rs1290264245 1362 dbSNP
rs1005969117 1367 dbSNP
rs989055928 1370 dbSNP
rs913501048 1374 dbSNP
rs1183710318 1377 dbSNP
rs1306405381 1377 dbSNP
rs1371008326 1377 dbSNP
rs147210066 1377 dbSNP
rs398057585 1377 dbSNP
rs543545054 1377 dbSNP
rs559589772 1377 dbSNP
rs56874167 1377 dbSNP
rs572389275 1377 dbSNP
rs1365760782 1378 dbSNP
rs199660470 1379 dbSNP
rs867084651 1383 dbSNP
rs1472636105 1388 dbSNP
rs66517123 1393 dbSNP
rs968737112 1395 dbSNP
rs979205754 1397 dbSNP
rs1491180744 1398 dbSNP
rs927359642 1398 dbSNP
rs56834847 1399 dbSNP
rs905323341 1410 dbSNP
rs1443887415 1425 dbSNP
rs937371493 1426 dbSNP
rs748803722 1428 dbSNP
rs1406408434 1439 dbSNP
rs1279030321 1440 dbSNP
rs1199707392 1450 dbSNP
rs1342766750 1456 dbSNP
rs1270007585 1462 dbSNP
rs1002392818 1463 dbSNP
rs768246556 1464 dbSNP
rs547115024 1469 dbSNP
rs1286643158 1475 dbSNP
rs553061942 1479 dbSNP
rs988435097 1491 dbSNP
rs1344396310 1497 dbSNP
rs1333908566 1500 dbSNP
rs886382992 1511 dbSNP
rs115499630 1523 dbSNP
rs1037366066 1526 dbSNP
rs1391386555 1551 dbSNP
rs1160570600 1554 dbSNP
rs1309852636 1567 dbSNP
rs1315476702 1569 dbSNP
rs1238714550 1577 dbSNP
rs771859981 1579 dbSNP
rs1361773800 1586 dbSNP
rs968028839 1588 dbSNP
rs1473561984 1589 dbSNP
rs1268249097 1591 dbSNP
rs979445500 1593 dbSNP
rs1440485549 1601 dbSNP
rs1249746464 1604 dbSNP
rs910653321 1604 dbSNP
rs995846735 1605 dbSNP
rs1328445058 1617 dbSNP
rs1177682107 1623 dbSNP
rs1030057714 1626 dbSNP
rs890612301 1631 dbSNP
rs1266296295 1638 dbSNP
rs541028745 1640 dbSNP
rs923151362 1644 dbSNP
rs929209586 1648 dbSNP
rs1020528443 1653 dbSNP
rs1158030345 1665 dbSNP
rs1047676475 1671 dbSNP
rs1385640310 1672 dbSNP
rs760661787 1675 dbSNP
rs1321762173 1676 dbSNP
rs79257844 1680 dbSNP
rs576242368 1683 dbSNP
rs941680981 1686 dbSNP
rs1364386357 1698 dbSNP
rs1442357134 1699 dbSNP
rs1044146418 1706 dbSNP
rs905625784 1713 dbSNP
rs1442507068 1715 dbSNP
rs753533527 1725 dbSNP
rs1299418745 1729 dbSNP
rs1321918610 1731 dbSNP
rs1371734207 1734 dbSNP
rs1002653094 1741 dbSNP
rs867144033 1742 dbSNP
rs1316162224 1747 dbSNP
rs1452271175 1750 dbSNP
rs139068414 1753 dbSNP
rs1344627960 1754 dbSNP
rs958707107 1757 dbSNP
rs561499525 1766 dbSNP
rs1363632027 1772 dbSNP
rs1295802229 1785 dbSNP
rs917345541 1786 dbSNP
rs1349981383 1794 dbSNP
rs149881179 1797 dbSNP
rs1391699800 1798 dbSNP
rs1168989059 1802 dbSNP
rs1448649667 1803 dbSNP
rs754572996 1806 dbSNP
rs541086101 1821 dbSNP
rs1206655210 1825 dbSNP
rs983722603 1835 dbSNP
rs967996727 1846 dbSNP
rs1246168372 1849 dbSNP
rs1000833630 1863 dbSNP
rs559480986 1866 dbSNP
rs147554542 1867 dbSNP
rs976229229 1870 dbSNP
rs1204797533 1872 dbSNP
rs1340493898 1873 dbSNP
rs551658196 1877 dbSNP
rs563938962 1882 dbSNP
rs1446277017 1883 dbSNP
rs1181341472 1886 dbSNP
rs1402636733 1903 dbSNP
rs1371953263 1905 dbSNP
rs140272932 1908 dbSNP
rs931674621 1910 dbSNP
rs763066087 1911 dbSNP
rs7182085 1919 dbSNP
rs909149001 1926 dbSNP
rs1197356258 1941 dbSNP
rs941649607 1954 dbSNP
rs548445127 1955 dbSNP
rs147954291 1956 dbSNP
rs1181754627 1958 dbSNP
rs1479837891 1969 dbSNP
rs1258116883 1973 dbSNP
rs1211340436 1974 dbSNP
rs530635991 1988 dbSNP
rs551926816 1989 dbSNP
rs1020832281 1996 dbSNP
rs904698922 1997 dbSNP
rs1351823550 2002 dbSNP
rs1450859328 2003 dbSNP
rs1408803802 2004 dbSNP
rs926969678 2010 dbSNP
rs1000421144 2013 dbSNP
rs534691210 2014 dbSNP
rs1358435092 2018 dbSNP
rs1056890051 2023 dbSNP
rs958676309 2030 dbSNP
rs1458841670 2035 dbSNP
rs1412830247 2036 dbSNP
rs570615423 2037 dbSNP
rs1258616963 2039 dbSNP
rs992857054 2044 dbSNP
rs1024384914 2045 dbSNP
rs1197913822 2046 dbSNP
rs1182741920 2050 dbSNP
rs896607411 2052 dbSNP
rs1009754918 2067 dbSNP
rs546639489 2071 dbSNP
rs1330476957 2072 dbSNP
rs1268180826 2077 dbSNP
rs951584208 2078 dbSNP
rs1199196170 2082 dbSNP
rs757484158 2096 dbSNP
rs183460810 2101 dbSNP
rs1378196500 2102 dbSNP
rs904099055 2104 dbSNP
rs1201492135 2120 dbSNP
rs1001094936 2121 dbSNP
rs907665260 2125 dbSNP
rs1187954882 2126 dbSNP
rs1416741728 2130 dbSNP
rs1427447750 2133 dbSNP
rs1176560502 2142 dbSNP
rs1408876099 2153 dbSNP
rs1468426593 2154 dbSNP
rs1165778618 2170 dbSNP
rs1423560494 2182 dbSNP
rs1176372093 2189 dbSNP
rs1017554708 2201 dbSNP
rs1468712700 2207 dbSNP
rs1336409868 2225 dbSNP
rs941880241 2228 dbSNP
rs964712604 2231 dbSNP
rs1203969147 2234 dbSNP
rs1484612450 2236 dbSNP
rs997977690 2249 dbSNP
rs187435996 2250 dbSNP
rs921883599 2251 dbSNP
rs931643709 2262 dbSNP
rs1312631127 2263 dbSNP
rs1230427002 2270 dbSNP
rs1319828969 2275 dbSNP
rs983319089 2282 dbSNP
rs530903093 2291 dbSNP
rs879699356 2291 dbSNP
rs140586174 2292 dbSNP
rs1433138900 2292 dbSNP
rs1457576926 2298 dbSNP
rs1268691033 2301 dbSNP
rs1051908604 2310 dbSNP
rs1361325028 2313 dbSNP
rs909075820 2313 dbSNP
rs1450484492 2320 dbSNP
rs1390036937 2321 dbSNP
rs890131329 2324 dbSNP
rs1268798314 2336 dbSNP
rs762243698 2338 dbSNP
rs1209962611 2339 dbSNP
rs945752592 2341 dbSNP
rs534754631 2360 dbSNP
rs71119932 2360 dbSNP
rs796797907 2362 dbSNP
rs557635141 2366 dbSNP
rs1225116477 2371 dbSNP
rs547309079 2371 dbSNP
rs904666755 2374 dbSNP
rs1000388264 2377 dbSNP
rs376919668 2379 dbSNP
rs576208698 2379 dbSNP
rs113896496 2389 dbSNP
rs1239963293 2396 dbSNP
rs1430743466 2398 dbSNP
rs894762848 2399 dbSNP
rs74956322 2403 dbSNP
rs1468006773 2410 dbSNP
rs1378789056 2416 dbSNP
rs1198874515 2423 dbSNP
rs28376576 2429 dbSNP
rs1183938604 2434 dbSNP
rs1479740905 2435 dbSNP
rs951420183 2444 dbSNP
rs1483202468 2445 dbSNP
rs1004674848 2452 dbSNP
rs1193920585 2461 dbSNP
rs936914800 2462 dbSNP
rs1017044176 2464 dbSNP
rs78841228 2468 dbSNP
rs1256520398 2471 dbSNP
rs750816209 2472 dbSNP
rs963170400 2479 dbSNP
rs1343745923 2483 dbSNP
rs1176410728 2486 dbSNP
rs756728781 2503 dbSNP
rs1410629216 2511 dbSNP
rs1335445184 2517 dbSNP
rs1402850440 2524 dbSNP
rs900464833 2531 dbSNP
rs1403466425 2536 dbSNP
rs997546866 2537 dbSNP
rs1030805847 2543 dbSNP
rs1426551346 2544 dbSNP
rs541022549 2545 dbSNP
rs777628307 2546 dbSNP
rs1405801077 2551 dbSNP
rs921851667 2555 dbSNP
rs754250414 2560 dbSNP
rs559415772 2568 dbSNP
rs963241706 2570 dbSNP
rs577796470 2579 dbSNP
rs754547986 2582 dbSNP
rs1270067323 2583 dbSNP
rs911520239 2587 dbSNP
rs1274222797 2601 dbSNP
rs1278019396 2605 dbSNP
rs1351349266 2626 dbSNP
rs1225210307 2627 dbSNP
rs1341477820 2634 dbSNP
rs1281901371 2635 dbSNP
rs1451073386 2640 dbSNP
rs1391547985 2643 dbSNP
rs550001506 2646 dbSNP
rs1400785150 2647 dbSNP
rs1406711572 2652 dbSNP
rs1352440213 2660 dbSNP
rs1156464537 2661 dbSNP
rs545103120 2662 dbSNP
rs1222856613 2664 dbSNP
rs1270397810 2668 dbSNP
rs1473630881 2668 dbSNP
rs1182808966 2669 dbSNP
rs1209376204 2669 dbSNP
rs1230210336 2669 dbSNP
rs1314783951 2669 dbSNP
rs1357389330 2669 dbSNP
rs1368796537 2669 dbSNP
rs1446524774 2669 dbSNP
rs60502890 2669 dbSNP
rs68176283 2669 dbSNP
rs1489667026 2671 dbSNP
rs1244324692 2678 dbSNP
rs945751853 2687 dbSNP
rs1367890317 2688 dbSNP
rs1299007859 2689 dbSNP
rs1430755974 2690 dbSNP
rs1198741442 2691 dbSNP
rs1344118703 2691 dbSNP
rs148155436 2693 dbSNP
rs925802373 2694 dbSNP
rs1471456283 2695 dbSNP
rs35445881 2695 dbSNP
rs202073733 2696 dbSNP
rs1407793776 2700 dbSNP
rs1365871695 2702 dbSNP
rs1425517353 2703 dbSNP
rs868627256 2703 dbSNP
rs866110312 2704 dbSNP
rs925720409 2709 dbSNP
rs936145934 2712 dbSNP
rs1189178141 2714 dbSNP
rs568439215 2715 dbSNP
rs1475066680 2716 dbSNP
rs1056013339 2719 dbSNP
rs1223947871 2721 dbSNP
rs116316084 2724 dbSNP
rs1291326997 2725 dbSNP
rs959944014 2727 dbSNP
rs1336216158 2729 dbSNP
rs1014478336 2735 dbSNP
rs1444298040 2737 dbSNP
rs34044919 2756 dbSNP
rs531146213 2756 dbSNP
rs992492893 2757 dbSNP
rs1360549353 2760 dbSNP
rs549353559 2767 dbSNP
rs1375952843 2775 dbSNP
rs887081926 2781 dbSNP
rs1422473990 2787 dbSNP
rs184844431 2787 dbSNP
rs1372145140 2797 dbSNP
rs538189263 2799 dbSNP
rs1170946165 2809 dbSNP
rs1356868176 2812 dbSNP
rs1330174880 2814 dbSNP
rs528788700 2819 dbSNP
rs1268384702 2821 dbSNP
rs1197572140 2826 dbSNP
rs371960458 2836 dbSNP
rs1484179881 2837 dbSNP
rs1275770089 2840 dbSNP
rs1204336328 2842 dbSNP
rs1306263684 2843 dbSNP
rs1281351847 2862 dbSNP
rs1220407985 2865 dbSNP
rs778221693 2866 dbSNP
rs1282135439 2873 dbSNP
rs747852590 2875 dbSNP
rs1298532743 2880 dbSNP
rs962808716 2881 dbSNP
rs1352635058 2884 dbSNP
rs1178165969 2885 dbSNP
rs1273117242 2888 dbSNP
rs1428642334 2890 dbSNP
rs1439999183 2893 dbSNP
rs936846428 2899 dbSNP
rs11072947 2903 dbSNP
rs1028750180 2905 dbSNP
rs900768103 2911 dbSNP
rs1479869609 2914 dbSNP
rs953227242 2936 dbSNP
rs987771729 2938 dbSNP
rs911838019 2945 dbSNP
rs571325228 2959 dbSNP
rs886479396 2966 dbSNP
rs1004963392 2972 dbSNP
rs1330697157 2973 dbSNP
rs1307283551 2976 dbSNP
rs535799782 2983 dbSNP
rs977148703 2984 dbSNP
rs1304411264 2985 dbSNP
rs1453253790 2994 dbSNP
rs925689531 3000 dbSNP
rs935694474 3003 dbSNP
rs898975078 3008 dbSNP
rs1055559337 3012 dbSNP
rs1364540557 3017 dbSNP
rs201033050 3020 dbSNP
rs1158694547 3023 dbSNP
rs538721243 3025 dbSNP
rs1416382156 3029 dbSNP
rs1411578501 3032 dbSNP
rs1034624607 3037 dbSNP
rs959964571 3041 dbSNP
rs950263518 3044 dbSNP
rs1046393724 3047 dbSNP
rs1486576480 3049 dbSNP
rs1260903797 3055 dbSNP
rs148992518 3057 dbSNP
rs940015108 3058 dbSNP
rs1314589406 3060 dbSNP
rs1246525938 3076 dbSNP
rs978444528 3082 dbSNP
rs1312847631 3084 dbSNP
rs1038296900 3085 dbSNP
rs1385723659 3093 dbSNP
rs898509430 3096 dbSNP
rs1316932149 3097 dbSNP
rs996858644 3098 dbSNP
rs146555053 3112 dbSNP
rs368948481 3112 dbSNP
rs1028383847 3115 dbSNP
rs569709285 3128 dbSNP
rs1243624170 3136 dbSNP
rs569536410 3143 dbSNP
rs1383878869 3144 dbSNP
rs1008758939 3153 dbSNP
rs1429667150 3153 dbSNP
rs1261784658 3159 dbSNP
rs907837109 3170 dbSNP
rs1019270297 3176 dbSNP
rs540058832 3185 dbSNP
rs1222875484 3187 dbSNP
rs756524368 3188 dbSNP
rs1257926140 3191 dbSNP
rs1462181165 3197 dbSNP
rs977744104 3200 dbSNP
rs1205899587 3201 dbSNP
rs746774387 3206 dbSNP
rs1229493775 3212 dbSNP
rs1423450307 3215 dbSNP
rs1001641932 3228 dbSNP
rs537239301 3231 dbSNP
rs957037419 3236 dbSNP
rs1369933970 3239 dbSNP
rs1304006588 3243 dbSNP
rs1474495320 3246 dbSNP
rs1424382584 3247 dbSNP
rs143737363 3248 dbSNP
rs1364068046 3250 dbSNP
rs558333598 3256 dbSNP
rs577019570 3259 dbSNP
rs915686254 3259 dbSNP
rs1169051235 3262 dbSNP
rs1399403084 3267 dbSNP
rs770903487 3273 dbSNP
rs1490098951 3280 dbSNP
rs1266494694 3296 dbSNP
rs1020621249 3300 dbSNP
rs12440908 3308 dbSNP
rs1250708103 3323 dbSNP
rs776649292 3325 dbSNP
rs966996951 3329 dbSNP
rs981674497 3334 dbSNP
rs573958202 3349 dbSNP
rs908708253 3350 dbSNP
rs1343931514 3353 dbSNP
rs541127054 3354 dbSNP
rs559282907 3357 dbSNP
rs1331280662 3365 dbSNP
rs1392334479 3367 dbSNP
rs1396332248 3367 dbSNP
rs963748052 3367 dbSNP
rs1459989022 3370 dbSNP
rs1224565089 3373 dbSNP
rs759348888 3382 dbSNP
rs1479903706 3384 dbSNP
rs1218656449 3397 dbSNP
rs975608271 3411 dbSNP
rs1183650159 3427 dbSNP
rs189780765 3429 dbSNP
rs552969117 3432 dbSNP
rs1324828015 3434 dbSNP
rs577735288 3435 dbSNP
rs1261655340 3436 dbSNP
rs1483151290 3440 dbSNP
rs898478352 3442 dbSNP
rs1223048974 3448 dbSNP
rs1264062745 3452 dbSNP
rs932678510 3455 dbSNP
rs1445525062 3459 dbSNP
rs1049788258 3460 dbSNP
rs1430084996 3461 dbSNP
rs1327314377 3467 dbSNP
rs1480712783 3470 dbSNP
rs1178577280 3471 dbSNP
rs1375703950 3475 dbSNP
rs544729727 3476 dbSNP
rs1009143970 3477 dbSNP
rs1159974746 3482 dbSNP
rs1018741668 3488 dbSNP
rs1470333031 3490 dbSNP
rs1386598440 3492 dbSNP
rs151065163 3493 dbSNP
rs903021957 3494 dbSNP
rs575293909 3496 dbSNP
rs376067034 3498 dbSNP
rs1345668454 3499 dbSNP
rs908133319 3502 dbSNP
rs1032945245 3511 dbSNP
rs1436497130 3514 dbSNP
rs940949557 3523 dbSNP
rs1350307092 3526 dbSNP
rs1278144013 3532 dbSNP
rs1248633481 3537 dbSNP
rs1384107940 3542 dbSNP
rs1314998008 3560 dbSNP
rs957006917 3575 dbSNP
rs920632318 3576 dbSNP
rs1281984655 3577 dbSNP
rs1319778784 3583 dbSNP
rs991189031 3589 dbSNP
rs7167335 3590 dbSNP
rs561180275 3593 dbSNP
rs971133772 3594 dbSNP
rs981608405 3604 dbSNP
rs528729404 3617 dbSNP
rs1182943307 3619 dbSNP
rs1269685086 3625 dbSNP
rs1014524516 3626 dbSNP
rs940201973 3627 dbSNP
rs554831299 3629 dbSNP
rs1041608709 3642 dbSNP
rs1490876228 3644 dbSNP
rs1197394145 3647 dbSNP
rs1282441018 3649 dbSNP
rs192918138 3653 dbSNP
rs564890704 3654 dbSNP
rs1000094876 3656 dbSNP
rs1432530763 3665 dbSNP
rs1364776130 3669 dbSNP
rs920207596 3671 dbSNP
rs1271423176 3681 dbSNP
rs1430823956 3684 dbSNP
rs1325427694 3688 dbSNP
rs574360847 3693 dbSNP
rs762194573 3694 dbSNP
rs1406499265 3697 dbSNP
rs1365928049 3698 dbSNP
rs1365381758 3702 dbSNP
rs1417479545 3704 dbSNP
rs1049755001 3706 dbSNP
rs1162747796 3706 dbSNP
rs1157719755 3709 dbSNP
rs1365636037 3712 dbSNP
rs1425952872 3713 dbSNP
rs912555657 3716 dbSNP
rs574706300 3719 dbSNP
rs767819934 3720 dbSNP
rs996575260 3724 dbSNP
rs1168512766 3737 dbSNP
rs944102823 3738 dbSNP
rs1240537163 3748 dbSNP
rs1042877107 3764 dbSNP
rs1029829050 3781 dbSNP
rs750871369 3817 dbSNP
rs761147823 3819 dbSNP
rs1268615428 3823 dbSNP
rs532548960 3829 dbSNP
rs183489272 3831 dbSNP
rs893099778 3834 dbSNP
rs1292719215 3835 dbSNP
rs1361908753 3843 dbSNP
rs1220267181 3850 dbSNP
rs1264953835 3855 dbSNP
rs569329137 3859 dbSNP
rs1177778611 3862 dbSNP
rs1252367285 3863 dbSNP
rs150199302 3864 dbSNP
rs1015123412 3865 dbSNP
rs1177796653 3866 dbSNP
rs962285462 3867 dbSNP
rs1446084442 3871 dbSNP
rs1162017617 3872 dbSNP
rs1329497558 3883 dbSNP
rs199856169 3887 dbSNP
rs1421549808 3890 dbSNP
rs766613821 3895 dbSNP
rs973682762 3897 dbSNP
rs188218114 3902 dbSNP
rs1189779146 3903 dbSNP
rs937325628 3909 dbSNP
rs1462938214 3911 dbSNP
rs1233922979 3913 dbSNP
rs181796595 3916 dbSNP
rs112535526 3917 dbSNP
rs534887537 3918 dbSNP
rs961556005 3920 dbSNP
rs1224889078 3926 dbSNP
rs1323727345 3930 dbSNP
rs778545414 3954 dbSNP
rs553306163 3955 dbSNP
rs533810691 3957 dbSNP
rs1217224340 3959 dbSNP
rs1375219584 3960 dbSNP
rs1279975580 3961 dbSNP
rs920174721 3966 dbSNP
rs1316179811 3970 dbSNP
rs1041924823 3972 dbSNP
rs571221231 3977 dbSNP
rs1398113886 3979 dbSNP
rs1338700016 3982 dbSNP
rs1470349740 3983 dbSNP
rs1405557765 4000 dbSNP
rs903066525 4001 dbSNP
rs1421148470 4004 dbSNP
rs538626968 4005 dbSNP
rs1177048030 4008 dbSNP
rs752142121 4015 dbSNP
rs935913268 4033 dbSNP
rs554043679 4037 dbSNP
rs556710694 4038 dbSNP
rs954255818 4043 dbSNP
rs1054309920 4052 dbSNP
rs770103764 4054 dbSNP
rs1254946669 4070 dbSNP
rs775930129 4075 dbSNP
rs1207562328 4083 dbSNP
rs985684278 4087 dbSNP
rs1226879736 4090 dbSNP
rs1307440791 4094 dbSNP
rs575282845 4114 dbSNP
rs1374492194 4124 dbSNP
rs758085124 4134 dbSNP
rs1453412938 4139 dbSNP
rs1308196875 4140 dbSNP
rs1301217099 4142 dbSNP
rs1205110045 4144 dbSNP
rs1455527745 4154 dbSNP
rs1252950676 4156 dbSNP
rs1158749233 4157 dbSNP
rs542376369 4160 dbSNP
rs944053030 4165 dbSNP
rs763173602 4167 dbSNP
rs1444617346 4172 dbSNP
rs924048110 4173 dbSNP
rs563623395 4181 dbSNP
rs1486608182 4185 dbSNP
rs1054252411 4188 dbSNP
rs115398043 4195 dbSNP
rs4780214 4196 dbSNP
rs962209866 4200 dbSNP
rs555825939 4202 dbSNP
rs1358712568 4203 dbSNP
rs1310655718 4210 dbSNP
rs1422030923 4211 dbSNP
rs1465576481 4226 dbSNP
rs141942299 4227 dbSNP
rs1288543688 4230 dbSNP
rs1398430337 4234 dbSNP
rs1027925398 4235 dbSNP
rs565227610 4259 dbSNP
rs780780381 4288 dbSNP
rs1446051660 4289 dbSNP
rs958707314 4290 dbSNP
rs1429793660 4291 dbSNP
rs1261943984 4292 dbSNP
rs1192438187 4304 dbSNP
rs1362945932 4305 dbSNP
rs1487131072 4320 dbSNP
rs991887317 4322 dbSNP
rs116558118 4330 dbSNP
rs1488078372 4331 dbSNP
rs1263625893 4333 dbSNP
rs1229652013 4342 dbSNP
rs1308121529 4362 dbSNP
rs1276388016 4366 dbSNP
rs950177596 4370 dbSNP
rs762281351 4371 dbSNP
rs1347696443 4375 dbSNP
rs1304065600 4379 dbSNP
rs1404738889 4386 dbSNP
rs1015336792 4387 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HCT116
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in ERX177609. RNA binding protein: AGO2. Condition:KO_D_AGO_CLIP_2_11 ...

- Krell J; Stebbing J; Carissimi C; Dabrowska et al., 2016, Genome research.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gcUCACACUCUAGUGUGGAGGg 5'
            | ||| |  || ||||||| 
Target 5' ucACUGUAACCUC-CACCUCCc 3'
8 - 28
Article - Krell J; Stebbing J; Carissimi C; Dabrowska et al.
- Genome research, 2016
DNA damage activates TP53-regulated surveillance mechanisms that are crucial in suppressing tumorigenesis. TP53 orchestrates these responses directly by transcriptionally modulating genes, including microRNAs (miRNAs), and by regulating miRNA biogenesis through interacting with the DROSHA complex. However, whether the association between miRNAs and AGO2 is regulated following DNA damage is not yet known. Here, we show that, following DNA damage, TP53 interacts with AGO2 to induce or reduce AGO2's association of a subset of miRNAs, including multiple let-7 family members. Furthermore, we show that specific mutations in TP53 decrease rather than increase the association of let-7 family miRNAs, reducing their activity without preventing TP53 from interacting with AGO2. This is consistent with the oncogenic properties of these mutants. Using AGO2 RIP-seq and PAR-CLIP-seq, we show that the DNA damage-induced increase in binding of let-7 family members to the RISC complex is functional. We unambiguously determine the global miRNA-mRNA interaction networks involved in the DNA damage response, validating them through the identification of miRNA-target chimeras formed by endogenous ligation reactions. We find that the target complementary region of the let-7 seed tends to have highly fixed positions and more variable ones. Additionally, we observe that miRNAs, whose cellular abundance or differential association with AGO2 is regulated by TP53, are involved in an intricate network of regulatory feedback and feedforward circuits. TP53-mediated regulation of AGO2-miRNA interaction represents a new mechanism of miRNA regulation in carcinogenesis.
LinkOut: [PMID: 26701625]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000397766.2 | 3UTR | AUGAGGCGGAGGUUGCAGUGAGCUGAGAUCACACCACUGCACUCCAGCCUGGGUGACAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
231 hsa-miR-3689d Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059166 TXNIP thioredoxin interacting protein 2 4
MIRT080699 KIAA1468 KIAA1468 2 2
MIRT218770 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT278059 KHNYN KH and NYN domain containing 2 2
MIRT345933 EIF4A1 eukaryotic translation initiation factor 4A1 2 2
MIRT366238 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT449689 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT451149 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451266 NDUFA11 NADH:ubiquinone oxidoreductase subunit A11 2 2
MIRT451375 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451570 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451585 HIRIP3 HIRA interacting protein 3 2 2
MIRT451614 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451763 ZNF611 zinc finger protein 611 2 6
MIRT452383 LY6E lymphocyte antigen 6 family member E 2 4
MIRT452573 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452735 PTGES3L prostaglandin E synthase 3 like 2 6
MIRT452867 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452975 CABP4 calcium binding protein 4 2 2
MIRT453215 CERS1 ceramide synthase 1 2 2
MIRT453259 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT453449 GLG1 golgi glycoprotein 1 2 2
MIRT453479 PITPNM3 PITPNM family member 3 2 2
MIRT453663 CD207 CD207 molecule 2 6
MIRT453724 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT453760 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT454181 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454330 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT454338 CDKL1 cyclin dependent kinase like 1 2 2
MIRT454427 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454665 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454825 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT455130 TBC1D25 TBC1 domain family member 25 2 2
MIRT455166 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455416 RXRB retinoid X receptor beta 2 2
MIRT455668 GLO1 glyoxalase I 2 2
MIRT455999 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456446 TMEM81 transmembrane protein 81 2 2
MIRT456642 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT456728 TMEM239 transmembrane protein 239 2 2
MIRT457131 ASPH aspartate beta-hydroxylase 2 2
MIRT457157 MXRA7 matrix remodeling associated 7 2 2
MIRT457358 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457458 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT457619 UPK3BL uroplakin 3B like 1 2 2
MIRT457692 ZNF587 zinc finger protein 587 2 2
MIRT457727 SMOX spermine oxidase 2 2
MIRT457788 VWA1 von Willebrand factor A domain containing 1 2 2
MIRT457875 THEM6 thioesterase superfamily member 6 2 4
MIRT457909 ZNF212 zinc finger protein 212 2 2
MIRT458395 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT458496 MARVELD2 MARVEL domain containing 2 2 2
MIRT458544 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT458577 TCOF1 treacle ribosome biogenesis factor 1 2 2
MIRT458732 CES2 carboxylesterase 2 2 2
MIRT458814 ZNF843 zinc finger protein 843 2 2
MIRT458931 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT459341 ZNF17 zinc finger protein 17 2 2
MIRT459365 MPLKIP M-phase specific PLK1 interacting protein 2 6
MIRT459572 NLGN2 neuroligin 2 2 2
MIRT460015 DTX3L deltex E3 ubiquitin ligase 3L 2 4
MIRT460144 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT460653 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT460798 VPS33A VPS33A, CORVET/HOPS core subunit 2 2
MIRT461058 KCNK6 potassium two pore domain channel subfamily K member 6 2 4
MIRT461458 SLC19A3 solute carrier family 19 member 3 2 2
MIRT461572 SCO1 SCO1, cytochrome c oxidase assembly protein 2 4
MIRT461927 TNFSF14 TNF superfamily member 14 2 2
MIRT461953 C3 complement C3 2 2
MIRT462278 KRR1 KRR1, small subunit processome component homolog 2 2
MIRT462744 EFNB1 ephrin B1 2 2
MIRT463136 ZNF451 zinc finger protein 451 2 4
MIRT463566 ZBTB39 zinc finger and BTB domain containing 39 2 6
MIRT463866 WNT7B Wnt family member 7B 2 2
MIRT464326 UST uronyl 2-sulfotransferase 2 2
MIRT464796 UBE2F ubiquitin conjugating enzyme E2 F (putative) 2 2
MIRT465034 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT466207 TMED10 transmembrane p24 trafficking protein 10 2 2
MIRT467007 SSBP2 single stranded DNA binding protein 2 2 2
MIRT467029 SRSF1 serine and arginine rich splicing factor 1 2 4
MIRT468001 SKI SKI proto-oncogene 2 2
MIRT468031 SIKE1 suppressor of IKBKE 1 2 6
MIRT468575 SERBP1 SERPINE1 mRNA binding protein 1 2 6
MIRT468834 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT468970 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469450 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT470888 PLXND1 plexin D1 2 2
MIRT470953 PKM pyruvate kinase, muscle 2 2
MIRT471828 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT472590 NACC1 nucleus accumbens associated 1 2 2
MIRT472805 MTMR12 myotubularin related protein 12 2 2
MIRT472818 MTMR10 myotubularin related protein 10 2 6
MIRT472914 MSN moesin 2 2
MIRT474558 KLHDC3 kelch domain containing 3 2 2
MIRT474716 KIF13A kinesin family member 13A 2 6
MIRT475279 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT475300 IFNLR1 interferon lambda receptor 1 2 2
MIRT475759 HDLBP high density lipoprotein binding protein 2 2
MIRT475786 HDGF heparin binding growth factor 2 2
MIRT475933 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476212 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT476238 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 2 4
MIRT476799 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT477988 DNAL1 dynein axonemal light chain 1 2 2
MIRT478317 DDN dendrin 2 2
MIRT479257 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479344 CEP97 centrosomal protein 97 2 2
MIRT479522 CDCA4 cell division cycle associated 4 2 2
MIRT479906 CCDC117 coiled-coil domain containing 117 2 6
MIRT481147 AVL9 AVL9 cell migration associated 2 6
MIRT481735 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT482089 ALG8 ALG8, alpha-1,3-glucosyltransferase 2 2
MIRT482389 AEN apoptosis enhancing nuclease 2 2
MIRT483093 TFPI tissue factor pathway inhibitor 2 2
MIRT484246 ANK1 ankyrin 1 2 2
MIRT484342 EPN1 epsin 1 2 4
MIRT489141 C5orf38 chromosome 5 open reading frame 38 2 2
MIRT489163 MRPL12 mitochondrial ribosomal protein L12 2 4
MIRT489547 SOX11 SRY-box 11 2 4
MIRT489780 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT489799 KRT80 keratin 80 2 6
MIRT490535 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT492198 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492283 SHISA6 shisa family member 6 2 4
MIRT501059 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT501094 SLC5A6 solute carrier family 5 member 6 2 4
MIRT503870 CBS cystathionine-beta-synthase 2 2
MIRT507981 BCL2L13 BCL2 like 13 2 4
MIRT508125 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT508205 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508385 SPTBN2 spectrin beta, non-erythrocytic 2 2 4
MIRT510308 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT510462 ZDHHC18 zinc finger DHHC-type containing 18 2 2
MIRT512227 ATXN3 ataxin 3 2 8
MIRT512665 STEAP3 STEAP3 metalloreductase 2 2
MIRT514184 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT515053 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515138 ZNF799 zinc finger protein 799 2 4
MIRT515452 ZNF747 zinc finger protein 747 2 2
MIRT515791 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT515905 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT516129 MRPS16 mitochondrial ribosomal protein S16 2 6
MIRT516679 ZNF860 zinc finger protein 860 2 4
MIRT516750 ZNF100 zinc finger protein 100 2 2
MIRT516971 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT517491 NPAP1 nuclear pore associated protein 1 2 2
MIRT517774 PROM2 prominin 2 2 2
MIRT517938 ZNF431 zinc finger protein 431 2 4
MIRT518386 ZNF250 zinc finger protein 250 2 2
MIRT520621 TMEM41B transmembrane protein 41B 2 2
MIRT521028 SLC30A5 solute carrier family 30 member 5 2 2
MIRT521454 RAD51 RAD51 recombinase 2 2
MIRT521564 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT521581 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT522263 NKRF NFKB repressing factor 2 2
MIRT522410 MXI1 MAX interactor 1, dimerization protein 2 2
MIRT522543 MED28 mediator complex subunit 28 2 6
MIRT522915 KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 2 2
MIRT523029 IGF1 insulin like growth factor 1 2 2
MIRT523854 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT524184 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524520 CDK19 cyclin dependent kinase 19 2 2
MIRT524674 C12orf5 TP53 induced glycolysis regulatory phosphatase 2 2
MIRT530257 ZNF620 zinc finger protein 620 2 2
MIRT540691 BMP3 bone morphogenetic protein 3 2 2
MIRT540976 C17orf85 nuclear cap binding subunit 3 2 2
MIRT545505 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT545631 GGCX gamma-glutamyl carboxylase 2 2
MIRT547358 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT550701 MPL MPL proto-oncogene, thrombopoietin receptor 2 4
MIRT550717 PMPCA peptidase, mitochondrial processing alpha subunit 2 4
MIRT551203 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT553999 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 4
MIRT561081 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT563523 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT564463 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565233 TRAF6 TNF receptor associated factor 6 2 2
MIRT566618 NKAP NFKB activating protein 2 2
MIRT569527 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT569639 QPCT glutaminyl-peptide cyclotransferase 2 2
MIRT570253 SSPN sarcospan 2 2
MIRT570570 OTUD7B OTU deubiquitinase 7B 2 2
MIRT570621 MTF2 metal response element binding transcription factor 2 2 2
MIRT571098 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 2
MIRT575196 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT575554 Cd99 CD99 antigen 2 2
MIRT575634 Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like 2 2
MIRT608267 NOP14 NOP14 nucleolar protein 2 2
MIRT609314 FXYD6 FXYD domain containing ion transport regulator 6 2 2
MIRT627670 RPL28 ribosomal protein L28 2 2
MIRT631185 TSPAN14 tetraspanin 14 2 2
MIRT631964 YIPF5 Yip1 domain family member 5 2 2
MIRT632885 GINM1 glycoprotein integral membrane 1 2 2
MIRT642618 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT645609 TSPAN6 tetraspanin 6 2 2
MIRT662227 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662329 MYLK3 myosin light chain kinase 3 2 2
MIRT662725 LRRC3C leucine rich repeat containing 3C 2 2
MIRT665520 USP14 ubiquitin specific peptidase 14 2 2
MIRT666634 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT668969 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT670925 DESI1 desumoylating isopeptidase 1 2 2
MIRT673939 ZNF500 zinc finger protein 500 2 2
MIRT674675 PLCE1 phospholipase C epsilon 1 2 2
MIRT675230 MAK male germ cell associated kinase 2 2
MIRT680864 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT681047 ZDBF2 zinc finger DBF-type containing 2 2 2
MIRT681105 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT683553 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684508 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684812 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT685981 CCDC77 coiled-coil domain containing 77 2 2
MIRT686709 TBC1D19 TBC1 domain family member 19 2 2
MIRT686867 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688908 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT691208 KLHL30 kelch like family member 30 2 2
MIRT692298 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT694380 MTA1 metastasis associated 1 2 2
MIRT696497 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT700686 POLR3D RNA polymerase III subunit D 2 2
MIRT701088 PAPOLG poly(A) polymerase gamma 2 2
MIRT703373 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT706189 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT706648 SMIM19 small integral membrane protein 19 2 2
MIRT709466 KRTAP19-1 keratin associated protein 19-1 2 2
MIRT709699 DMWD DM1 locus, WD repeat containing 2 2
MIRT710693 LYRM4 LYR motif containing 4 2 2
MIRT713457 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT722409 RARS2 arginyl-tRNA synthetase 2, mitochondrial 2 2
MIRT725391 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT725548 DNMT3A DNA methyltransferase 3 alpha 2 2

Error report submission