miRTarBase - #MIRT662682


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pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LRRC47   
Synonyms -
Description leucine rich repeat containing 47
Transcript NM_020710   
Expression
Putative miRNA Targets on LRRC47
3'UTR of LRRC47
(miRNA target sites are highlighted)		 
>LRRC47|NM_020710|3'UTR
   1 CGCCAGGGCCGCCTGTCCGCGTTTGTTTGGCCGGTTTTGCGGAGGTTTCTATGCGGCAATGCTGAATTATCCGTTAGATT
  81 TTCACCCCAGTTTTTTTGTTGGTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGTGAT
 161 CTCGAGTCACTGCAGCCTGTGTCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTG
 241 TGTGCCACTAAGCTCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATTTTGACCAGGATGGTCTTGATCTC
 321 TTGACCTCATGATCTGTCCACCTCTGCCCCTCAAAGTGCTGGGATTACGTGATCCACCCGCCTCAGCCTCCCAAAGTGCT
 401 GGGATTACAGGCGTGAGCTGTGCCTGGCCCACCCCAGCATTTTTTAAGATGTATGTATTCGTTGTTCTGTTTTTCCAGAT
 481 GATTCTGTCGTAAAGTGATGCTATGTTGTCGTTACAACATCAAAGTGATTTTACGGTTTTTGATGGGATTATTCAAGTGT
 561 CAGAATTAACTGTTCAAAATGTTCTGAATCATGTAGATACATGGCAGGTAACTGTTTATGGGAGAAAAGTACAGTGCTGT
 641 TACGTGGCACTGTACAGTCATGTGCCACGTAACAGCGTCTGGGTCAGTGACGGACACTTACCTGACAGCGGATCCACAAT
 721 ATTCTCGTGCAGTGTGTTTGGAATCCTGGTCTGGGCTCTCGTCGTTGGCCTTGTAGATCAAGTAGGGGAAGTGAGTGATG
 801 TTCAGTCATGCTGCTGGGACACTTGGTTTTCCAGATGAAAACACATAAATAAAACTACATGCACCATCAAAAAAAAAAAA
 881 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||: ||||   ||||||| 
Target 5' cgATTCTCCTGCCTCAGCCTc 3'
 197 - 217 156.00 -17.50
2 
miRNA  3' ggUAGAAG---GAAGUCGGAg 5'
            |||  |   | ||||||| 
Target 5' tgATCCACCCGCCTCAGCCTc 3'
 370 - 390 144.00 -19.20
3 
miRNA  3' ggUAGA----AG-GAAGUCGGAg 5'
            ||||    || || |||||| 
Target 5' tgATCTCGAGTCACTGCAGCCTg 3'
 157 - 179 126.00 -11.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30138686 1 COSMIC
COSN30129539 18 COSMIC
COSN31612044 19 COSMIC
COSN26983075 21 COSMIC
COSN30605235 25 COSMIC
COSN30505528 32 COSMIC
COSN26983076 33 COSMIC
COSN26983074 40 COSMIC
COSN31593082 51 COSMIC
COSN13541969 54 COSMIC
COSN30136384 72 COSMIC
COSN30177949 88 COSMIC
COSN30523275 90 COSMIC
COSN26983078 91 COSMIC
COSN20094194 102 COSMIC
COSN30130819 102 COSMIC
COSN26983077 113 COSMIC
COSN30174812 135 COSMIC
COSN7218421 135 COSMIC
COSN1103670 196 COSMIC
COSN31588349 197 COSMIC
COSN29793072 479 COSMIC
COSN31617993 738 COSMIC
COSN8468136 933 COSMIC
COSN30327252 1027 COSMIC
COSN7218413 1096 COSMIC
COSN7218412 1279 COSMIC
COSN6525392 1405 COSMIC
COSN20592886 1848 COSMIC
COSN20807059 1959 COSMIC
COSN14972222 2146 COSMIC
COSN7057419 2147 COSMIC
COSN2529191 2484 COSMIC
rs2996428 361 GWAS
rs12061931 1296 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs747805488 1 dbSNP
rs144287205 2 dbSNP
rs1463260651 4 dbSNP
rs762996102 5 dbSNP
rs991903030 6 dbSNP
rs1215997811 8 dbSNP
rs775584143 10 dbSNP
rs760607204 11 dbSNP
rs773031964 12 dbSNP
rs780614753 18 dbSNP
rs754537541 19 dbSNP
rs370396004 20 dbSNP
rs768464440 21 dbSNP
rs747007228 30 dbSNP
rs201858517 32 dbSNP
rs1398167379 33 dbSNP
rs779769455 34 dbSNP
rs755592683 35 dbSNP
rs1298468228 37 dbSNP
rs1447353108 39 dbSNP
rs150916171 40 dbSNP
rs370208893 41 dbSNP
rs757591546 42 dbSNP
rs896311826 45 dbSNP
rs751915290 46 dbSNP
rs764266167 49 dbSNP
rs1369002303 51 dbSNP
rs867939377 54 dbSNP
rs889172047 56 dbSNP
rs1186618500 58 dbSNP
rs773290315 68 dbSNP
rs973779731 70 dbSNP
rs1363270218 71 dbSNP
rs995000479 72 dbSNP
rs910766302 73 dbSNP
rs1273726620 77 dbSNP
rs1424685897 84 dbSNP
rs186337329 86 dbSNP
rs1187186657 89 dbSNP
rs1344637442 90 dbSNP
rs757780974 96 dbSNP
rs1428357113 99 dbSNP
rs1036602741 102 dbSNP
rs1376996481 106 dbSNP
rs1286019490 108 dbSNP
rs950370976 109 dbSNP
rs1350377502 110 dbSNP
rs1188594683 113 dbSNP
rs201485132 114 dbSNP
rs35582128 114 dbSNP
rs71580225 114 dbSNP
rs1487629725 115 dbSNP
rs1291260145 117 dbSNP
rs1404255027 118 dbSNP
rs1411067805 121 dbSNP
rs896085484 122 dbSNP
rs1183088179 126 dbSNP
rs532912242 127 dbSNP
rs937699074 130 dbSNP
rs926374360 131 dbSNP
rs1252128464 132 dbSNP
rs1361655159 134 dbSNP
rs979186834 135 dbSNP
rs946542174 140 dbSNP
rs913762671 144 dbSNP
rs1000916168 145 dbSNP
rs1329102426 152 dbSNP
rs1225148436 155 dbSNP
rs988011759 163 dbSNP
rs542880179 164 dbSNP
rs34286051 166 dbSNP
rs761021009 170 dbSNP
rs3207175 175 dbSNP
rs1435394468 177 dbSNP
rs3207177 179 dbSNP
rs3207179 180 dbSNP
rs3207180 182 dbSNP
rs3207183 187 dbSNP
rs1302118209 193 dbSNP
rs568176088 197 dbSNP
rs953397449 198 dbSNP
rs1473526534 204 dbSNP
rs1251059452 218 dbSNP
rs1190383609 231 dbSNP
rs571478573 232 dbSNP
rs994950740 235 dbSNP
rs929837530 237 dbSNP
rs557472216 247 dbSNP
rs897878638 254 dbSNP
rs1464446343 267 dbSNP
rs1173026154 283 dbSNP
rs897976445 284 dbSNP
rs1318041010 287 dbSNP
rs1268512762 302 dbSNP
rs372544368 306 dbSNP
rs781280854 309 dbSNP
rs1365073899 316 dbSNP
rs1294877425 320 dbSNP
rs1014435397 323 dbSNP
rs1441025873 325 dbSNP
rs1387353598 326 dbSNP
rs896021378 335 dbSNP
rs1317956171 346 dbSNP
rs1490880554 347 dbSNP
rs565654125 350 dbSNP
rs1364290175 355 dbSNP
rs2996428 361 dbSNP
rs1431192647 368 dbSNP
rs1001819343 369 dbSNP
rs142690384 379 dbSNP
rs1464601741 380 dbSNP
rs1251780777 382 dbSNP
rs1210633855 388 dbSNP
rs1486506109 394 dbSNP
rs778860890 408 dbSNP
rs1043440088 413 dbSNP
rs1314238334 415 dbSNP
rs1321109230 419 dbSNP
rs1304613907 424 dbSNP
rs1234661683 429 dbSNP
rs946447404 432 dbSNP
rs1282309372 433 dbSNP
rs1363974808 434 dbSNP
rs1294833825 435 dbSNP
rs774232696 439 dbSNP
rs1052663856 441 dbSNP
rs1405162201 444 dbSNP
rs1346939532 450 dbSNP
rs933557821 459 dbSNP
rs944559987 460 dbSNP
rs923577223 461 dbSNP
rs911795147 462 dbSNP
rs190716260 467 dbSNP
rs770911309 469 dbSNP
rs1360741086 485 dbSNP
rs140324089 487 dbSNP
rs1449134644 489 dbSNP
rs953346530 490 dbSNP
rs920617723 491 dbSNP
rs1177496946 503 dbSNP
rs973417986 505 dbSNP
rs1256070348 510 dbSNP
rs529206595 511 dbSNP
rs8520 515 dbSNP
rs1014796285 519 dbSNP
rs1204863237 520 dbSNP
rs1341050129 523 dbSNP
rs1271995064 524 dbSNP
rs769552765 528 dbSNP
rs960270756 530 dbSNP
rs1438422375 534 dbSNP
rs564771217 535 dbSNP
rs1326443004 541 dbSNP
rs1311370952 549 dbSNP
rs1251205174 557 dbSNP
rs1197476251 562 dbSNP
rs960583424 563 dbSNP
rs1025577993 565 dbSNP
rs1262290134 574 dbSNP
rs1170642349 577 dbSNP
rs1462571193 584 dbSNP
rs1368041637 588 dbSNP
rs1035002549 592 dbSNP
rs1185474975 597 dbSNP
rs761232051 597 dbSNP
rs186329446 601 dbSNP
rs147145486 605 dbSNP
rs1043345906 611 dbSNP
rs1482240154 614 dbSNP
rs1249183685 616 dbSNP
rs17411356 617 dbSNP
rs1335804108 629 dbSNP
rs1339651861 631 dbSNP
rs1264390885 635 dbSNP
rs1241956621 639 dbSNP
rs1336885209 639 dbSNP
rs1331542177 642 dbSNP
rs113603592 643 dbSNP
rs1408991836 643 dbSNP
rs530898690 644 dbSNP
rs1392226990 645 dbSNP
rs112599349 651 dbSNP
rs1161562388 654 dbSNP
rs1405923886 660 dbSNP
rs1337812231 661 dbSNP
rs923494907 662 dbSNP
rs1471139445 668 dbSNP
rs143483007 669 dbSNP
rs935615979 674 dbSNP
rs573925882 676 dbSNP
rs1470590342 677 dbSNP
rs1438095499 678 dbSNP
rs1266168951 681 dbSNP
rs911756439 683 dbSNP
rs1469362322 691 dbSNP
rs780928116 692 dbSNP
rs181787551 701 dbSNP
rs1365222992 702 dbSNP
rs763587879 706 dbSNP
rs931863009 709 dbSNP
rs754520410 710 dbSNP
rs969113316 711 dbSNP
rs916344203 714 dbSNP
rs1395389522 719 dbSNP
rs991798013 725 dbSNP
rs1204084233 726 dbSNP
rs11547616 727 dbSNP
rs560558507 733 dbSNP
rs1204184957 736 dbSNP
rs907946971 740 dbSNP
rs1376716986 747 dbSNP
rs1191296809 751 dbSNP
rs1455293290 753 dbSNP
rs1253130669 760 dbSNP
rs1207531635 761 dbSNP
rs8379 762 dbSNP
rs1016751616 763 dbSNP
rs960467485 764 dbSNP
rs1343959525 765 dbSNP
rs1243053993 766 dbSNP
rs1034503245 771 dbSNP
rs534349871 773 dbSNP
rs1050489495 775 dbSNP
rs1454964596 775 dbSNP
rs997434493 780 dbSNP
rs1317971650 786 dbSNP
rs968909081 795 dbSNP
rs757909527 800 dbSNP
rs1021835068 803 dbSNP
rs1052903298 805 dbSNP
rs1424043028 807 dbSNP
rs1010527022 813 dbSNP
rs892164060 815 dbSNP
rs565666537 816 dbSNP
rs935577746 826 dbSNP
rs555083730 830 dbSNP
rs535184278 831 dbSNP
rs925554050 835 dbSNP
rs577575014 847 dbSNP
rs1243791403 849 dbSNP
rs1008670546 857 dbSNP
rs549980696 861 dbSNP
rs890220019 864 dbSNP
rs1276293500 866 dbSNP
rs916291725 867 dbSNP
rs533312984 868 dbSNP
rs1050222746 869 dbSNP
rs931809081 871 dbSNP
rs1448024632 872 dbSNP
rs1315216211 877 dbSNP
rs1339208868 877 dbSNP
rs1447226769 880 dbSNP
rs3737594 882 dbSNP
rs71592355 885 dbSNP
rs1219650180 886 dbSNP
rs3831901 889 dbSNP
rs397840685 889 dbSNP
rs574310797 889 dbSNP
rs972836350 889 dbSNP
rs201010927 891 dbSNP
rs1491263707 892 dbSNP
rs1189838866 897 dbSNP
rs1485837184 902 dbSNP
rs148009484 904 dbSNP
rs1337948915 905 dbSNP
rs1037660322 914 dbSNP
rs866208031 917 dbSNP
rs1273849477 924 dbSNP
rs1016819597 925 dbSNP
rs985237540 926 dbSNP
rs188946813 931 dbSNP
rs1415801730 932 dbSNP
rs1029000807 936 dbSNP
rs370170310 938 dbSNP
rs938753648 942 dbSNP
rs767047563 943 dbSNP
rs756527077 948 dbSNP
rs752934974 959 dbSNP
rs927378449 960 dbSNP
rs1166938339 967 dbSNP
rs1030989089 968 dbSNP
rs1366272140 969 dbSNP
rs1164200104 977 dbSNP
rs1407028726 981 dbSNP
rs980201161 985 dbSNP
rs968899167 986 dbSNP
rs117715216 987 dbSNP
rs531845855 988 dbSNP
rs956555200 991 dbSNP
rs1030642739 992 dbSNP
rs1008992197 995 dbSNP
rs1275112192 999 dbSNP
rs1264948797 1002 dbSNP
rs890175569 1006 dbSNP
rs555674482 1011 dbSNP
rs996006506 1012 dbSNP
rs16824088 1013 dbSNP
rs1435147583 1017 dbSNP
rs766414625 1027 dbSNP
rs374512762 1028 dbSNP
rs886371194 1030 dbSNP
rs112847093 1035 dbSNP
rs1320412295 1043 dbSNP
rs972400067 1044 dbSNP
rs1420588605 1046 dbSNP
rs1281688971 1049 dbSNP
rs1223122361 1053 dbSNP
rs1409007468 1068 dbSNP
rs1346328969 1069 dbSNP
rs941042112 1073 dbSNP
rs564269690 1077 dbSNP
rs537698565 1078 dbSNP
rs1214376142 1079 dbSNP
rs185698762 1082 dbSNP
rs927379619 1083 dbSNP
rs572205711 1087 dbSNP
rs1218387179 1093 dbSNP
rs1328081683 1093 dbSNP
rs1301002212 1101 dbSNP
rs1233194113 1104 dbSNP
rs1410367240 1110 dbSNP
rs3737593 1116 dbSNP
rs1305050530 1120 dbSNP
rs535053041 1122 dbSNP
rs1364383331 1123 dbSNP
rs1479907036 1123 dbSNP
rs947546520 1124 dbSNP
rs1433149757 1125 dbSNP
rs1345638995 1126 dbSNP
rs1029431909 1127 dbSNP
rs977019454 1148 dbSNP
rs1260276160 1159 dbSNP
rs17411279 1160 dbSNP
rs989402907 1169 dbSNP
rs1255808296 1183 dbSNP
rs1209145179 1189 dbSNP
rs555823667 1191 dbSNP
rs1020292128 1193 dbSNP
rs1234405204 1194 dbSNP
rs1306477270 1196 dbSNP
rs999491375 1201 dbSNP
rs143525442 1204 dbSNP
rs1203361428 1210 dbSNP
rs1312077403 1212 dbSNP
rs1412658445 1214 dbSNP
rs769863964 1221 dbSNP
rs1174433773 1228 dbSNP
rs1022338357 1230 dbSNP
rs1371475069 1234 dbSNP
rs181686560 1239 dbSNP
rs987113077 1240 dbSNP
rs1429676218 1249 dbSNP
rs1222188889 1250 dbSNP
rs1186290535 1258 dbSNP
rs1486826753 1268 dbSNP
rs1372666188 1269 dbSNP
rs547818852 1270 dbSNP
rs149309981 1272 dbSNP
rs1056624519 1279 dbSNP
rs1334478138 1280 dbSNP
rs61759305 1281 dbSNP
rs963143794 1286 dbSNP
rs1308040064 1289 dbSNP
rs776231590 1290 dbSNP
rs1231240070 1291 dbSNP
rs768689273 1295 dbSNP
rs12061931 1296 dbSNP
rs941004148 1310 dbSNP
rs886319692 1311 dbSNP
rs531703282 1317 dbSNP
rs113334989 1318 dbSNP
rs565648797 1319 dbSNP
rs779753464 1320 dbSNP
rs373783399 1334 dbSNP
rs372534231 1343 dbSNP
rs552700942 1346 dbSNP
rs1181889475 1347 dbSNP
rs914671054 1350 dbSNP
rs377176465 1359 dbSNP
rs932556317 1366 dbSNP
rs1053257962 1367 dbSNP
rs1349295768 1376 dbSNP
rs866951710 1377 dbSNP
rs934825168 1384 dbSNP
rs912809469 1385 dbSNP
rs976588891 1386 dbSNP
rs1285045010 1387 dbSNP
rs1237995211 1392 dbSNP
rs1334232548 1403 dbSNP
rs956067413 1404 dbSNP
rs1392168098 1405 dbSNP
rs1242354989 1412 dbSNP
rs987492368 1414 dbSNP
rs954346420 1427 dbSNP
rs35860660 1435 dbSNP
rs978572563 1436 dbSNP
rs757225227 1442 dbSNP
rs968161727 1443 dbSNP
rs1451699424 1444 dbSNP
rs1379616721 1446 dbSNP
rs1158386967 1447 dbSNP
rs1468867474 1448 dbSNP
rs1361718169 1451 dbSNP
rs1183605377 1458 dbSNP
rs1419294658 1470 dbSNP
rs1304285553 1471 dbSNP
rs745325820 1479 dbSNP
rs1344169149 1482 dbSNP
rs1022289253 1484 dbSNP
rs1204334725 1486 dbSNP
rs1420934791 1486 dbSNP
rs963092327 1490 dbSNP
rs1016026769 1492 dbSNP
rs115009012 1498 dbSNP
rs1370497240 1501 dbSNP
rs572324528 1504 dbSNP
rs959585281 1506 dbSNP
rs535369465 1509 dbSNP
rs1003676507 1514 dbSNP
rs561611535 1515 dbSNP
rs1185072622 1520 dbSNP
rs1399449645 1528 dbSNP
rs1387674270 1535 dbSNP
rs1485680977 1540 dbSNP
rs1035600953 1542 dbSNP
rs541457489 1548 dbSNP
rs1005257052 1553 dbSNP
rs905805379 1556 dbSNP
rs1044345999 1557 dbSNP
rs1218947577 1561 dbSNP
rs888224208 1566 dbSNP
rs1192467338 1569 dbSNP
rs1011540812 1572 dbSNP
rs1049354707 1573 dbSNP
rs1263645663 1576 dbSNP
rs1205457231 1579 dbSNP
rs575609029 1581 dbSNP
rs1289585960 1582 dbSNP
rs922482976 1587 dbSNP
rs10909790 1597 dbSNP
rs1348760458 1597 dbSNP
rs1429285539 1604 dbSNP
rs1328680635 1606 dbSNP
rs1414506471 1609 dbSNP
rs934835856 1619 dbSNP
rs1322193700 1623 dbSNP
rs912749856 1627 dbSNP
rs1380272722 1628 dbSNP
rs539512229 1630 dbSNP
rs932862845 1638 dbSNP
rs921524105 1639 dbSNP
rs753158518 1640 dbSNP
rs963079416 1641 dbSNP
rs908955319 1646 dbSNP
rs781403018 1651 dbSNP
rs2799182 1652 dbSNP
rs751756397 1655 dbSNP
rs1035907513 1656 dbSNP
rs1255121592 1658 dbSNP
rs1213370546 1660 dbSNP
rs959362861 1663 dbSNP
rs981253850 1668 dbSNP
rs766537785 1669 dbSNP
rs184694519 1675 dbSNP
rs1354017091 1682 dbSNP
rs1163577048 1697 dbSNP
rs1458867731 1700 dbSNP
rs1416297497 1703 dbSNP
rs763051379 1709 dbSNP
rs1022840135 1710 dbSNP
rs1168799583 1720 dbSNP
rs1421588392 1723 dbSNP
rs1428263452 1735 dbSNP
rs1171372426 1740 dbSNP
rs1011527806 1742 dbSNP
rs534104959 1743 dbSNP
rs1028032113 1745 dbSNP
rs777646825 1750 dbSNP
rs34121825 1752 dbSNP
rs1439575349 1759 dbSNP
rs900824371 1763 dbSNP
rs1213665842 1765 dbSNP
rs999368029 1766 dbSNP
rs891226394 1783 dbSNP
rs1488784601 1786 dbSNP
rs1040753511 1790 dbSNP
rs1267093490 1791 dbSNP
rs934552924 1792 dbSNP
rs1278536493 1802 dbSNP
rs765234809 1811 dbSNP
rs903130901 1817 dbSNP
rs1331394358 1819 dbSNP
rs1460899349 1820 dbSNP
rs548885161 1826 dbSNP
rs1166864431 1828 dbSNP
rs915292518 1836 dbSNP
rs1220076439 1837 dbSNP
rs538271197 1838 dbSNP
rs569264617 1843 dbSNP
rs1175757895 1844 dbSNP
rs1471277253 1846 dbSNP
rs1238921415 1849 dbSNP
rs144913663 1852 dbSNP
rs761643871 1853 dbSNP
rs1275525963 1857 dbSNP
rs1222793668 1866 dbSNP
rs866165215 1869 dbSNP
rs941664501 1870 dbSNP
rs776557503 1874 dbSNP
rs1302017903 1875 dbSNP
rs908896085 1880 dbSNP
rs1221751260 1885 dbSNP
rs927952518 1889 dbSNP
rs532642109 1890 dbSNP
rs1309376609 1891 dbSNP
rs983157601 1892 dbSNP
rs1368702406 1895 dbSNP
rs76548923 1900 dbSNP
rs928411619 1904 dbSNP
rs961900033 1907 dbSNP
rs547582362 1908 dbSNP
rs981199893 1910 dbSNP
rs1156642576 1914 dbSNP
rs1296921228 1926 dbSNP
rs1015865045 1929 dbSNP
rs984214589 1935 dbSNP
rs752370372 1937 dbSNP
rs768307966 1938 dbSNP
rs1022828837 1939 dbSNP
rs996547765 1941 dbSNP
rs900943094 1944 dbSNP
rs1479581324 1950 dbSNP
rs1019684339 1952 dbSNP
rs990053729 1953 dbSNP
rs527465790 1954 dbSNP
rs957374621 1957 dbSNP
rs563948625 1958 dbSNP
rs1286199125 1959 dbSNP
rs1232945737 1964 dbSNP
rs1043000983 1968 dbSNP
rs1302757665 1969 dbSNP
rs35169286 1985 dbSNP
rs1194005716 1992 dbSNP
rs998876482 1993 dbSNP
rs891166319 1997 dbSNP
rs894306603 2006 dbSNP
rs114578581 2007 dbSNP
rs1312567391 2009 dbSNP
rs938077425 2014 dbSNP
rs531247563 2018 dbSNP
rs1433091826 2022 dbSNP
rs928082159 2025 dbSNP
rs997012654 2026 dbSNP
rs1417937468 2027 dbSNP
rs771814318 2030 dbSNP
rs1188659633 2038 dbSNP
rs562156164 2047 dbSNP
rs900033033 2052 dbSNP
rs1038615470 2060 dbSNP
rs1233387150 2065 dbSNP
rs941571313 2068 dbSNP
rs1484467003 2069 dbSNP
rs80140736 2069 dbSNP
rs953002474 2070 dbSNP
rs1306851823 2075 dbSNP
rs1293283839 2077 dbSNP
rs1028428058 2080 dbSNP
rs1047812204 2081 dbSNP
rs928987599 2082 dbSNP
rs1312015946 2083 dbSNP
rs1413225608 2088 dbSNP
rs35938957 2091 dbSNP
rs1333827432 2105 dbSNP
rs1461484286 2109 dbSNP
rs1353280184 2110 dbSNP
rs1173236180 2113 dbSNP
rs1019380537 2115 dbSNP
rs1417644430 2122 dbSNP
rs1186227328 2130 dbSNP
rs1474040178 2131 dbSNP
rs998890443 2132 dbSNP
rs1200547169 2139 dbSNP
rs553553235 2145 dbSNP
rs540857461 2150 dbSNP
rs1011497592 2151 dbSNP
rs192752811 2154 dbSNP
rs1055624532 2156 dbSNP
rs1479087677 2160 dbSNP
rs1342485466 2161 dbSNP
rs915767166 2169 dbSNP
rs1391024841 2170 dbSNP
rs989958879 2171 dbSNP
rs1393462821 2188 dbSNP
rs1466648155 2189 dbSNP
rs1181107790 2190 dbSNP
rs1439015777 2191 dbSNP
rs1394339503 2196 dbSNP
rs957483975 2199 dbSNP
rs1463291986 2200 dbSNP
rs766726269 2203 dbSNP
rs1369399986 2204 dbSNP
rs1187903680 2205 dbSNP
rs1180325148 2214 dbSNP
rs1247870438 2218 dbSNP
rs763543325 2224 dbSNP
rs2275817 2227 dbSNP
rs1262189022 2235 dbSNP
rs750703720 2236 dbSNP
rs1272394931 2246 dbSNP
rs940135065 2247 dbSNP
rs538546954 2252 dbSNP
rs1358270303 2255 dbSNP
rs1265804708 2258 dbSNP
rs908544919 2262 dbSNP
rs1334182830 2265 dbSNP
rs755318454 2267 dbSNP
rs569524334 2268 dbSNP
rs931550337 2269 dbSNP
rs1389032087 2271 dbSNP
rs1158334597 2273 dbSNP
rs1391956998 2273 dbSNP
rs1029741424 2277 dbSNP
rs558933042 2278 dbSNP
rs1439709751 2292 dbSNP
rs1237655294 2294 dbSNP
rs921530526 2296 dbSNP
rs538619373 2297 dbSNP
rs2275818 2298 dbSNP
rs1204276249 2300 dbSNP
rs1017087177 2302 dbSNP
rs1241135786 2304 dbSNP
rs539731377 2304 dbSNP
rs912267497 2306 dbSNP
rs977191236 2308 dbSNP
rs1005725685 2310 dbSNP
rs887317258 2316 dbSNP
rs1047347040 2321 dbSNP
rs188182290 2324 dbSNP
rs1250337261 2330 dbSNP
rs906896234 2331 dbSNP
rs1380816634 2332 dbSNP
rs1358240578 2334 dbSNP
rs1299715395 2340 dbSNP
rs541457866 2341 dbSNP
rs780258265 2342 dbSNP
rs1045437641 2346 dbSNP
rs71634370 2347 dbSNP
rs915670522 2350 dbSNP
rs77440840 2355 dbSNP
rs1378093422 2358 dbSNP
rs1192220632 2366 dbSNP
rs1487219543 2368 dbSNP
rs935889389 2369 dbSNP
rs141138657 2370 dbSNP
rs1485456604 2386 dbSNP
rs1004280247 2388 dbSNP
rs1278316982 2392 dbSNP
rs924515204 2407 dbSNP
rs201032918 2414 dbSNP
rs955540863 2416 dbSNP
rs1442606001 2418 dbSNP
rs922576465 2426 dbSNP
rs531507989 2427 dbSNP
rs1342847756 2431 dbSNP
rs1279200633 2432 dbSNP
rs1400277550 2436 dbSNP
rs1374423501 2438 dbSNP
rs1331663643 2441 dbSNP
rs1048352030 2442 dbSNP
rs931332913 2443 dbSNP
rs975425133 2444 dbSNP
rs1476783315 2445 dbSNP
rs1187911207 2446 dbSNP
rs1194058558 2447 dbSNP
rs964089279 2451 dbSNP
rs562615580 2453 dbSNP
rs1017031594 2454 dbSNP
rs562362533 2455 dbSNP
rs1443131869 2460 dbSNP
rs1194625514 2463 dbSNP
rs1320594914 2464 dbSNP
rs1215323736 2467 dbSNP
rs1353763806 2472 dbSNP
rs1288869309 2483 dbSNP
rs944324648 2484 dbSNP
rs1006128667 2488 dbSNP
rs1340595632 2490 dbSNP
rs951610360 2491 dbSNP
rs1327578388 2493 dbSNP
rs912727909 2496 dbSNP
rs71634369 2497 dbSNP
rs745738358 2498 dbSNP
rs914338820 2498 dbSNP
rs1324951935 2499 dbSNP
rs1317862141 2500 dbSNP
rs576678344 2500 dbSNP
rs1183881251 2504 dbSNP
rs1473229644 2506 dbSNP
rs906811863 2516 dbSNP
rs1400758609 2519 dbSNP
rs368637050 2522 dbSNP
rs1012540505 2523 dbSNP
rs894227107 2530 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ggUAGAAG---GAAGUCGGAg 5'
            |||  |   | ||||||| 
Target 5' ugAUCCACCCGCCUCAGCCUc 3'
 		6 - 26
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_020710 | 3UTR | CAAAGUGCUGGGAUUACGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAGGCGUGAGCUGUGCCUGGCCCACCCCAGCAUUUUUUAAGAUGUAUGUAUUCGUUGUUCUGUUUUUCCAGAUGAUUCUGUCGUAAAGUGAUGCUAUGUUGUCGUUACAACAUCAAAGUGAUUUUACGGUUUUUGAUGGGAUUAUUCAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_020710 | 3UTR | UUUUUGAGAUGGAGUCUCGCUCUGUCGCCAGGCUGGAGUGCAGUGGCGUGAUCUCGAGUCACUGCAGCCUGUGUCUCCUGGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCCAAGUAGCUGGGACUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_020710 | 3UTR | UUUUUGAGAUGGAGUCUCGCUCUGUCGCCAGGCUGGAGUGCAGUGGCGUGAUCUCGAGUCACUGCAGCCUGUGUCUCCUGGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCCAAGUAGCUGGGACUACAGGUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_020710 | 3UTR | UUUUUGAGAUGGAGUCUCGCUCUGUCGCCAGGCUGGAGUGCAGUGGCGUGAUCUCGAGUCACUGCAGCCUGUGUCUCCUGGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCCAAGUAGCUGGGACUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_020710 | 3UTR | UUUUUUGAGAUGGAGUCUCGCUCUGUCGCCAGGCUGGAGUGCAGUGGCGUGAUCUCGAGUCACUGCAGCCUGUGUCUCCUGGGUUCAAGCGAUUCUCCUGCCUCAGCCUCCCAAGUAGCUGGGACUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_020710 | 3UTR | AAAGUGCUGGGAUUACGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000378251.1 | 3UTR | UUACGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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