pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CD209   
Synonyms CDSIGN, CLEC4L, DC-SIGN, DC-SIGN1
Description CD209 molecule
Transcript NM_001144893   
Other Transcripts NM_001144894 , NM_001144895 , NM_001144896 , NM_001144897 , NM_001144899 , NM_021155   
Expression
Putative miRNA Targets on CD209
3'UTR of CD209
(miRNA target sites are highlighted)
>CD209|NM_001144893|3'UTR
   1 CAGAACTTCACCCCCTTTTAAGCTACAGTTCCTTCTCTCCATCCTTCGACCTTCACAAAATCTCTGGGACTGTTCTTTGT
  81 CAGATTCTTCCTCCTTTAGAAGGCTGGGTCCCATTCTGTCCTTCTTGTCATGCCTCCAATTTCCCCTGGTGTAGAGCTTG
 161 TTTTTCTGGCCCATCCTTGGAGCTTTATGAGTGAGCTGGTGTGGGATGCCTTTGGGGGTGGACTTGTGTTCCAAGAATCC
 241 ACTCTCTCTTCCTTTTGGAGATTAGGATATTTGGGTTGCCATGTGTAGCTGCTATGTCCCCTGGGGCGTTATCTTATACA
 321 TGCAAACCTACCATCTGTTCAACTTCCACCTACCACCTCCTGCACCCCTTTGATCGGGGACTTACTGGTTGCAAGAGCTC
 401 ATTTTGCAGGCTGGAAGCACCAGGGAATTAATTCCCCCAGTCAACCAATGGCACCCAGAGAGGGCATGGAGGCTCCACGC
 481 AACCCCTTCCACCCCCACATCTTCCTTTGTCTTATACATGGCTTCCATTTGGCTGTTTCTAAGTTGTATTCTTTATTTTA
 561 TTATTATTATTACTATTTTTCGAGATGGAGTTTCACTCTTGTCGCTCAGGCTGGAGTGCCATGGCGCGATCTTGGCTCAC
 641 TGCAACCTCTGCCTCCCGGGTTCAAGTGATTCTCCTGCCTCAGCCTCACGAGTAGCTGGAATTACAGGCAGGCGCCACCA
 721 GACCCGGCTAATTTTTTGTATTTTTAGTACAGATGGGGTTTCTCCGTGTTGGTCAGGCTGGTCTTGAACTCCCGACCTCA
 801 GATGATCTGCCCGCCTCGGCCTCCCAAAATTGCTGGGATTACAGGTGTGAGCCACCGCGCCTGGCCTATTATTTTTTGTA
 881 AGAATAAAACAGGTTTATTGGGATTTGGGACTCTGAACAGTTCTGTCTCTACTACCTGATCTCCTCCTACCACGACTTTG
 961 GGATCTAGAGGAGCTTTGGCTCCGGCTGTGACGGCTCCGGCCGTTCTCACTGCGGCTGCACCGGCCCCCGCTGCGGTCAC
1041 TATTTCTTCCTCTGCTAGGTGAATTGTGCCTCTCCTGGCTCTTTGACATGTGCTAGTGAGATTTCTTCCTTTTCCTTTCG
1121 GATTCCCCATTTCTTTTGTAGGAATGGTCTGGACTAGGGTTCTCCTTCCCCGCAGCCTGTAGTATTCATCGTGGTGGCCC
1201 ACCCTCTCTCTCCCCTTGGAGCTCTTGCCAAAGGAGGAGACAAGCAGAGGTCTCTATTGGATTTCTCAACACCTGAAGAA
1281 AGTTGCAGTGTTTTCCTCTTGGACATTGTTGTATTTCAAATAAACCACAAATCATCATTTTCCACCGAGCCACTGGGCAG
1361 AATTCACACTGAAGCTGTCGTCCTGCGTACATACCATCGTCCGTTAAACAGAGAAAGAGCTGCTTGGCATTCTTCTTCCG
1441 ACTGGTACTGAACATATATACTTGCCCCTCAGGTGAGGTTCCAAGTTGCAACTGACCTTGAACTGAATCACTCTCCCCAC
1521 GTTATTTTTTAATTACTATTTTTTTTTAAAGATGGGGTCTTGCTCTGTCGCCAGGCTGGAGTGCAGTGGCGCGATCTAGG
1601 CTCACTGCAACTTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTCCACTAAAAGTA
1681 CAAAAATTAGCTGGGCGTGCACCACTGCGCCCAGCTAATTCTTGTATTTTTGGTAGAGACGGGGTTTCAACATGTTGACC
1761 AGGATGGTCTCGATCTCTTGACCTCGTGATTCGCCCGCCGCGTCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCG
1841 CGCCCAGTCTCTCCCCACGTTCTTGAACTCGGGCAGCACATCCTCACAGAAATCTAGGAACTGTTGGTAGGTTTCTTCCT
1921 CGCTGTACTCCAGGCTTGCTTCGGAGTCATAGTCATCCCTCCTGCACTGCTCCTTTCCAAACACTGTAAACATGCTTTTA
2001 ATAAGAAGGGTAGGACTGGATGTTGGGAAATCATGTGAACATCTATCTCCAAATCTGCAAGCTCCTGTTTTACTGTAGAA
2081 GGGACAATTAACTCCATCCTTCTCCATGACTCTGAAATCCAAGGGGGGGTTCCGGGTTTTGCCATGTGGCGCCATTTTCC
2161 AACTCATTTTCAGCCTGATCCAGCATCTTCTGGACAGCTTCCGGTTTTTGTTTCTTCTGTCGTTTCTGTTCCTCCTCCTC
2241 TCTCTCTTTCCTCTGCTGTTCTTCCCATTGTTCCTTTAACTTTCGCTCTTGTTCTTGCCGTTTTCTAGCCACCTCTTCCT
2321 TTTCCTTCTTTATTCTGAATTCTTCTTGTGCCTTCTGCTCTCTCAGCAACCACTCCTCATGTAATCTTTGCCTCTCTCTT
2401 CCCCATAGCTTTTCTAGTTGTTGTTTTTCAATAAAAGTGTCCTCCTCTTTCTGTGAGAGTCCTGAGTCCCTCAGTGGAGC
2481 AAGTTCCTGCTGGCGTTTCTTTCGTTTCTCCTTCTTCAGGGCGGCCCTGTACTTTTTGTGGCTTGGTTTCTCTGGAAATG
2561 TCACCTTTTCGGGCGCAGCCATCTTGCCGGCACCGCCCCGCCCCTCTAGTTGTATCCTTTATAATAAACTGGTAAACATT
2641 GTAACCGCAGATTCAGCCCAATCTGGTTCAACTTTGTGTAATAAAATGGCGAGTTGTTTTTCAGTTGTCGTGGACCCCCA
2721 GGTTGCAAGTTACATACCCTGGGCATGTCCAGATGAACGAAGCGTGCAAATCCACGTGGAACCTAAGTGCTCAGACCGAG
2801 GAACAGGGACTGAGTTAAGAAGTGGACACCACGTGGCATGATCCTTGATCCAATCAGATTGAGCCCTGGCGTGATCCAGT
2881 CAGATCAAGCCTCCTGAATCCCCTCATTACAAGATCCAATCATATCATGCCTCACTACCCTCTGTATATAAAATCTGCCC
2961 CAGCCTCCAACTTGGAGAGACAGATTTGGGCCAGACTCCTGTGTCCTTGCTTGGCTGCCTTGCAATAAATTTTTCTCTCT
3041 ACAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucgguCGGUUGAGUGUCACGUCu 5'
               ||||:  :: ||||||| 
Target 5' ctgtcGCCAGGCTGGAGTGCAGt 3'
1565 - 1587 154.00 -20.30
2
miRNA  3' ucggucGGUUGA---GUGUCACGUCu 5'
                ||||:|   | ::|||:|| 
Target 5' atgcctCCAATTTCCCCTGGTGTAGa 3'
130 - 155 125.00 -18.10
3
miRNA  3' ucGGU-CGGUUGAGUGUCACGUCu 5'
            ||: |:|  | || ||||| | 
Target 5' cgCCGCGTCCTCCCAAAGTGCTGg 3'
1796 - 1819 125.00 -16.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN1082562 7 COSMIC
COSN26969841 11 COSMIC
COSN30527791 13 COSMIC
COSN30527783 14 COSMIC
COSN30462487 31 COSMIC
COSN30479403 32 COSMIC
COSN31534608 37 COSMIC
COSN30150594 47 COSMIC
COSN30125926 58 COSMIC
COSN31492455 60 COSMIC
COSN30493853 62 COSMIC
COSN30182175 67 COSMIC
COSN30107678 83 COSMIC
COSN30494062 83 COSMIC
COSN30107680 84 COSMIC
COSN30171909 93 COSMIC
COSN1082563 99 COSMIC
COSN30485469 149 COSMIC
COSN8977673 493 COSMIC
COSN31961490 856 COSMIC
COSN9853203 859 COSMIC
COSN19434336 953 COSMIC
COSN31505844 984 COSMIC
COSN24405436 999 COSMIC
COSN17872000 1003 COSMIC
COSN30154436 1006 COSMIC
COSN30112514 1029 COSMIC
COSN30161418 1061 COSMIC
COSN31609945 1072 COSMIC
COSN30134489 1073 COSMIC
COSN1219837 1102 COSMIC
COSN30474669 1108 COSMIC
COSN19364746 1119 COSMIC
COSN30486150 1126 COSMIC
COSN30160019 1133 COSMIC
COSN31504694 1146 COSMIC
COSN30131783 1159 COSMIC
COSN30111532 1171 COSMIC
COSN7451853 1172 COSMIC
COSN20079461 1190 COSMIC
COSN30513864 1191 COSMIC
COSN28800612 1202 COSMIC
COSN30119071 1211 COSMIC
COSN30471164 1219 COSMIC
COSN31493013 1235 COSMIC
COSN30139475 1248 COSMIC
COSN1082564 1252 COSMIC
COSN30512296 1260 COSMIC
COSN30182218 1267 COSMIC
COSN1082565 1278 COSMIC
COSN24400252 1302 COSMIC
COSN32095471 1336 COSMIC
COSN30100592 1347 COSMIC
COSN30520671 1355 COSMIC
COSN30449325 1365 COSMIC
COSN30456456 1379 COSMIC
COSN13843775 1380 COSMIC
COSN21487709 1381 COSMIC
COSN30125098 1386 COSMIC
COSN26969834 1387 COSMIC
COSN30192607 1398 COSMIC
COSN26969840 1399 COSMIC
COSN26969839 1402 COSMIC
COSN18742258 1403 COSMIC
COSN30178078 1422 COSMIC
COSN13843773 1423 COSMIC
COSN8262967 1439 COSMIC
COSN30506148 1440 COSMIC
COSN30474790 1468 COSMIC
COSN31512633 1475 COSMIC
COSN31497795 1518 COSMIC
COSN20079363 1520 COSMIC
COSN30540416 1523 COSMIC
COSN30464084 1524 COSMIC
COSN30134994 1527 COSMIC
COSN30496903 1538 COSMIC
COSN22816693 1539 COSMIC
COSN30504563 1547 COSMIC
COSN30511062 1548 COSMIC
COSN30453265 1558 COSMIC
COSN28665775 1573 COSMIC
COSN394758 1591 COSMIC
COSN30167848 1593 COSMIC
COSN13843769 1616 COSMIC
COSN30133284 1622 COSMIC
COSN2382226 1666 COSMIC
COSN1082566 1709 COSMIC
COSN28663654 1743 COSMIC
COSN30172811 1761 COSMIC
COSN15711337 1762 COSMIC
COSN28855044 1780 COSMIC
COSN13843766 1785 COSMIC
COSN16907742 1792 COSMIC
COSN20317238 1793 COSMIC
COSN31507192 1800 COSMIC
COSN31569382 1800 COSMIC
COSN26358568 1802 COSMIC
COSN30526575 1813 COSMIC
COSN31569310 1827 COSMIC
COSN2531862 1830 COSMIC
COSN30119851 1840 COSMIC
COSN2382227 1842 COSMIC
COSN30100355 1856 COSMIC
COSN31586813 1859 COSMIC
COSN30510165 1871 COSMIC
COSN31483626 1885 COSMIC
COSN30123866 1889 COSMIC
COSN30184718 1897 COSMIC
COSN30455057 1897 COSMIC
COSN30487980 1898 COSMIC
COSN30514956 1935 COSMIC
COSN30475485 1942 COSMIC
COSN30454268 1957 COSMIC
COSN16082017 1961 COSMIC
COSN30504438 1962 COSMIC
COSN15322850 1974 COSMIC
COSN17880904 1982 COSMIC
COSN30506610 2004 COSMIC
COSN30480426 2005 COSMIC
COSN30120375 2027 COSMIC
COSN28571770 2032 COSMIC
COSN30467091 2050 COSMIC
COSN30190529 2055 COSMIC
COSN30522101 2064 COSMIC
COSN30130889 2068 COSMIC
COSN30470775 2094 COSMIC
COSN30494038 2108 COSMIC
COSN30186091 2119 COSMIC
COSN1219836 2122 COSMIC
COSN31527000 2122 COSMIC
COSN26969838 2123 COSMIC
COSN30481162 2123 COSMIC
COSN30459641 2124 COSMIC
COSN26969842 2133 COSMIC
COSN27799918 2136 COSMIC
COSN13843750 2159 COSMIC
COSN30451201 2193 COSMIC
COSN30177579 2200 COSMIC
COSN30146345 2202 COSMIC
COSN30116875 2203 COSMIC
COSN30154680 2234 COSMIC
COSN31517405 2285 COSMIC
COSN30480931 2324 COSMIC
COSN26573504 2328 COSMIC
COSN32059495 2335 COSMIC
COSN30191294 2364 COSMIC
COSN31488969 2364 COSMIC
COSN30129392 2386 COSMIC
COSN26643330 2390 COSMIC
COSN30529019 2394 COSMIC
COSN31496211 2403 COSMIC
COSN31495250 2415 COSMIC
COSN30168358 2423 COSMIC
COSN32058090 2431 COSMIC
COSN30460260 2442 COSMIC
COSN1082567 2444 COSMIC
COSN30455160 2469 COSMIC
COSN32053358 2472 COSMIC
COSN13843739 2486 COSMIC
COSN30131657 2495 COSMIC
COSN30452320 2503 COSMIC
COSN30471482 2508 COSMIC
COSN30460550 2510 COSMIC
COSN30468651 2515 COSMIC
COSN31481558 2516 COSMIC
COSN30517916 2527 COSMIC
COSN31523822 2530 COSMIC
COSN1082568 2560 COSMIC
COSN7451852 2570 COSMIC
COSN30111233 2574 COSMIC
COSN30104831 2579 COSMIC
COSN20079633 2588 COSMIC
COSN31574002 2595 COSMIC
COSN30540573 2596 COSMIC
COSN30119126 2597 COSMIC
COSN6670164 2629 COSMIC
COSN31525537 2633 COSMIC
COSN26314318 2758 COSMIC
COSN16016628 2870 COSMIC
COSN21007242 2894 COSMIC
COSN30137264 2899 COSMIC
COSN30109777 2902 COSMIC
COSN17037447 2940 COSMIC
COSN1219835 2961 COSMIC
COSN26774497 3010 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs777564858 3 dbSNP
rs901036660 5 dbSNP
rs755992712 11 dbSNP
rs763850707 12 dbSNP
rs867459495 13 dbSNP
rs1336589845 14 dbSNP
rs767201321 15 dbSNP
rs1006859713 16 dbSNP
rs754637180 18 dbSNP
rs1157028131 26 dbSNP
rs192979112 27 dbSNP
rs766028272 28 dbSNP
rs376163704 29 dbSNP
rs200104082 30 dbSNP
rs1474199570 32 dbSNP
rs1259480116 33 dbSNP
rs1364368999 39 dbSNP
rs376636419 40 dbSNP
rs369077812 42 dbSNP
rs1363176704 43 dbSNP
rs776823008 44 dbSNP
rs770126743 45 dbSNP
rs768949282 47 dbSNP
rs775655494 48 dbSNP
rs528884293 50 dbSNP
rs1253952410 53 dbSNP
rs1486720060 64 dbSNP
rs528658540 72 dbSNP
rs560294624 94 dbSNP
rs1043940944 95 dbSNP
rs1194921987 100 dbSNP
rs946921379 103 dbSNP
rs769389103 107 dbSNP
rs991138138 123 dbSNP
rs754931032 127 dbSNP
rs928299953 127 dbSNP
rs745323407 143 dbSNP
rs1386673793 144 dbSNP
rs1443223193 148 dbSNP
rs540305083 150 dbSNP
rs1441122136 154 dbSNP
rs529730335 159 dbSNP
rs1275907068 160 dbSNP
rs1368217203 161 dbSNP
rs560757501 174 dbSNP
rs1015642839 175 dbSNP
rs143192119 176 dbSNP
rs138818051 182 dbSNP
rs11465395 183 dbSNP
rs1267139276 187 dbSNP
rs1463232138 189 dbSNP
rs1215036710 192 dbSNP
rs962933879 196 dbSNP
rs996746988 197 dbSNP
rs189037227 199 dbSNP
rs965295506 205 dbSNP
rs1337075046 208 dbSNP
rs150207510 209 dbSNP
rs891096939 215 dbSNP
rs1357310123 221 dbSNP
rs1410047631 223 dbSNP
rs1029624896 227 dbSNP
rs1326817885 228 dbSNP
rs553071887 236 dbSNP
rs1349425232 240 dbSNP
rs748688425 245 dbSNP
rs1291759993 279 dbSNP
rs1320405434 289 dbSNP
rs1009363049 294 dbSNP
rs1375394075 298 dbSNP
rs1228804183 302 dbSNP
rs536311629 307 dbSNP
rs902634156 308 dbSNP
rs1234825487 310 dbSNP
rs892218840 311 dbSNP
rs1320634979 313 dbSNP
rs4804802 315 dbSNP
rs1235122535 321 dbSNP
rs946932272 327 dbSNP
rs1446890880 331 dbSNP
rs895324811 333 dbSNP
rs1000615810 334 dbSNP
rs904884486 342 dbSNP
rs1044741542 352 dbSNP
rs1413311413 364 dbSNP
rs1472107360 373 dbSNP
rs10403018 375 dbSNP
rs140941672 376 dbSNP
rs1307333208 385 dbSNP
rs1348462800 387 dbSNP
rs1057485042 392 dbSNP
rs940235732 394 dbSNP
rs908699455 403 dbSNP
rs571858671 406 dbSNP
rs984192032 417 dbSNP
rs1226129225 419 dbSNP
rs1274412412 434 dbSNP
rs4804801 443 dbSNP
rs921276661 445 dbSNP
rs184000491 448 dbSNP
rs1486883424 449 dbSNP
rs565213456 454 dbSNP
rs189782238 455 dbSNP
rs1471901906 462 dbSNP
rs780315167 464 dbSNP
rs11465396 467 dbSNP
rs956606848 474 dbSNP
rs1032160283 478 dbSNP
rs148098554 479 dbSNP
rs1334496577 485 dbSNP
rs561035164 486 dbSNP
rs750455268 491 dbSNP
rs1296343681 496 dbSNP
rs1044752843 499 dbSNP
rs1013224898 505 dbSNP
rs1226991545 509 dbSNP
rs376040046 514 dbSNP
rs550345053 518 dbSNP
rs1201405959 521 dbSNP
rs896129624 561 dbSNP
rs1441047584 566 dbSNP
rs765885106 567 dbSNP
rs1248857322 573 dbSNP
rs1448970661 576 dbSNP
rs781165232 582 dbSNP
rs1057397366 596 dbSNP
rs983362057 600 dbSNP
rs530484762 603 dbSNP
rs565035664 604 dbSNP
rs1048511321 605 dbSNP
rs1403919622 608 dbSNP
rs931399941 611 dbSNP
rs576549413 620 dbSNP
rs921324243 624 dbSNP
rs544874106 625 dbSNP
rs1187613995 626 dbSNP
rs1477744931 627 dbSNP
rs965436597 628 dbSNP
rs757371172 630 dbSNP
rs1190818987 639 dbSNP
rs1234689868 641 dbSNP
rs1490747892 646 dbSNP
rs1265634897 647 dbSNP
rs1220617889 656 dbSNP
rs1319689462 658 dbSNP
rs1225800449 671 dbSNP
rs1269031688 674 dbSNP
rs11465397 675 dbSNP
rs895284601 681 dbSNP
rs1255037115 684 dbSNP
rs185373670 690 dbSNP
rs1316118746 692 dbSNP
rs1276406560 696 dbSNP
rs1406799919 697 dbSNP
rs1376965050 700 dbSNP
rs1313424444 711 dbSNP
rs866771837 713 dbSNP
rs906819516 714 dbSNP
rs6603119 722 dbSNP
rs1396109103 725 dbSNP
rs1386826092 726 dbSNP
rs1323528922 731 dbSNP
rs1456775228 739 dbSNP
rs765326036 741 dbSNP
rs1444828943 742 dbSNP
rs929681651 743 dbSNP
rs192098825 744 dbSNP
rs7248772 754 dbSNP
rs764886902 755 dbSNP
rs1038093353 756 dbSNP
rs557389033 758 dbSNP
rs11465400 766 dbSNP
rs1422060246 771 dbSNP
rs1312297318 793 dbSNP
rs1449742747 797 dbSNP
rs11465401 810 dbSNP
rs1481120522 811 dbSNP
rs776166985 812 dbSNP
rs1472135294 813 dbSNP
rs578020971 813 dbSNP
rs1369809346 817 dbSNP
rs746191344 818 dbSNP
rs558504713 823 dbSNP
rs955281453 826 dbSNP
rs1487261578 827 dbSNP
rs535376999 837 dbSNP
rs1412194522 840 dbSNP
rs1309158940 846 dbSNP
rs1350303778 856 dbSNP
rs1234409531 857 dbSNP
rs111735318 859 dbSNP
rs1341240064 861 dbSNP
rs922549688 867 dbSNP
rs978476649 871 dbSNP
rs1317248810 879 dbSNP
rs760309237 888 dbSNP
rs1275238184 892 dbSNP
rs7248637 898 dbSNP
rs1022728179 899 dbSNP
rs1257850727 903 dbSNP
rs1423963024 908 dbSNP
rs1312829912 915 dbSNP
rs1300600511 919 dbSNP
rs1350805818 922 dbSNP
rs1385325586 924 dbSNP
rs1366263515 931 dbSNP
rs1431077458 937 dbSNP
rs372688873 941 dbSNP
rs538085590 948 dbSNP
rs749595073 949 dbSNP
rs1428243431 953 dbSNP
rs1033841891 956 dbSNP
rs567258680 980 dbSNP
rs1003743319 982 dbSNP
rs550603471 983 dbSNP
rs1398803523 984 dbSNP
rs906765832 990 dbSNP
rs1047953074 992 dbSNP
rs1229192272 993 dbSNP
rs11465402 998 dbSNP
rs1174675249 999 dbSNP
rs1257611020 1002 dbSNP
rs564862388 1002 dbSNP
rs1199570348 1013 dbSNP
rs1431117113 1016 dbSNP
rs1253602304 1020 dbSNP
rs568910734 1021 dbSNP
rs1179062751 1022 dbSNP
rs528395931 1023 dbSNP
rs770005068 1029 dbSNP
rs1448135405 1031 dbSNP
rs941110407 1034 dbSNP
rs1465837208 1035 dbSNP
rs1236341725 1039 dbSNP
rs1391058608 1040 dbSNP
rs889565892 1042 dbSNP
rs1483505102 1052 dbSNP
rs1544767 1057 dbSNP
rs781528766 1066 dbSNP
rs1212794470 1068 dbSNP
rs1303288266 1070 dbSNP
rs542451078 1083 dbSNP
rs1312594615 1088 dbSNP
rs573735640 1089 dbSNP
rs1253901745 1096 dbSNP
rs933848415 1102 dbSNP
rs1208817663 1103 dbSNP
rs1246955681 1107 dbSNP
rs1463152982 1109 dbSNP
rs1193479950 1118 dbSNP
rs563655029 1119 dbSNP
rs757318089 1120 dbSNP
rs1414485272 1133 dbSNP
rs1458024697 1140 dbSNP
rs945291789 1144 dbSNP
rs1386607321 1146 dbSNP
rs1438663872 1162 dbSNP
rs1295248460 1167 dbSNP
rs1368148372 1171 dbSNP
rs1239954152 1172 dbSNP
rs751707109 1180 dbSNP
rs1330948218 1181 dbSNP
rs1228693863 1183 dbSNP
rs1339029400 1188 dbSNP
rs182574144 1189 dbSNP
rs1247827203 1191 dbSNP
rs1488408768 1193 dbSNP
rs578023555 1195 dbSNP
rs1254488302 1198 dbSNP
rs1473110333 1200 dbSNP
rs1544766 1202 dbSNP
rs1409974981 1206 dbSNP
rs1407172429 1210 dbSNP
rs1165498369 1213 dbSNP
rs1301786999 1214 dbSNP
rs1457406937 1233 dbSNP
rs1301207106 1239 dbSNP
rs1464075597 1240 dbSNP
rs1346644359 1241 dbSNP
rs959431587 1242 dbSNP
rs758346559 1252 dbSNP
rs1158858916 1257 dbSNP
rs1370663766 1267 dbSNP
rs1229552732 1269 dbSNP
rs535014704 1275 dbSNP
rs572817510 1282 dbSNP
rs1220962621 1298 dbSNP
rs190284057 1305 dbSNP
rs1483604221 1309 dbSNP
rs1378269303 1313 dbSNP
rs111742529 1319 dbSNP
rs1185152124 1320 dbSNP
rs1473858855 1322 dbSNP
rs1182659193 1325 dbSNP
rs1424364153 1326 dbSNP
rs970855817 1327 dbSNP
rs1026905857 1332 dbSNP
rs11465403 1334 dbSNP
rs899450073 1345 dbSNP
rs1287096756 1346 dbSNP
rs1307119335 1349 dbSNP
rs1216170399 1360 dbSNP
rs1449848615 1363 dbSNP
rs1284400903 1370 dbSNP
rs570203160 1374 dbSNP
rs1243083444 1375 dbSNP
rs1317635662 1379 dbSNP
rs1005202871 1385 dbSNP
rs550418394 1386 dbSNP
rs889512119 1387 dbSNP
rs1211150875 1390 dbSNP
rs759414242 1392 dbSNP
rs1340441709 1396 dbSNP
rs1049442577 1398 dbSNP
rs1190537188 1399 dbSNP
rs537182979 1401 dbSNP
rs1311175994 1402 dbSNP
rs1393847817 1403 dbSNP
rs1341827655 1409 dbSNP
rs372268442 1409 dbSNP
rs1449931232 1413 dbSNP
rs1298214437 1415 dbSNP
rs1167881138 1416 dbSNP
rs1418739702 1426 dbSNP
rs571230911 1440 dbSNP
rs11465404 1442 dbSNP
rs1358167297 1452 dbSNP
rs1358194137 1457 dbSNP
rs369709603 1462 dbSNP
rs186513902 1466 dbSNP
rs1321890488 1467 dbSNP
rs1365282420 1479 dbSNP
rs1228382891 1480 dbSNP
rs1268915320 1484 dbSNP
rs1347632406 1485 dbSNP
rs1220141490 1496 dbSNP
rs73921550 1498 dbSNP
rs563294494 1501 dbSNP
rs900967601 1503 dbSNP
rs766190869 1510 dbSNP
rs1248799406 1513 dbSNP
rs1367879309 1518 dbSNP
rs1185327956 1519 dbSNP
rs1430166331 1520 dbSNP
rs1264013042 1521 dbSNP
rs565643352 1524 dbSNP
rs1192979107 1526 dbSNP
rs1240242246 1538 dbSNP
rs548839611 1541 dbSNP
rs945306378 1547 dbSNP
rs535167552 1548 dbSNP
rs536492795 1548 dbSNP
rs529094961 1567 dbSNP
rs879618257 1569 dbSNP
rs1388797518 1572 dbSNP
rs1433674837 1579 dbSNP
rs11465405 1586 dbSNP
rs1210859181 1590 dbSNP
rs563534836 1591 dbSNP
rs1437651550 1592 dbSNP
rs1274565800 1593 dbSNP
rs1321852789 1594 dbSNP
rs1264269444 1598 dbSNP
rs1268966897 1600 dbSNP
rs543231457 1605 dbSNP
rs1230263078 1612 dbSNP
rs760255942 1615 dbSNP
rs982158408 1619 dbSNP
rs1282076152 1620 dbSNP
rs1453187899 1623 dbSNP
rs970804728 1625 dbSNP
rs533515835 1631 dbSNP
rs1278315413 1632 dbSNP
rs1479319680 1633 dbSNP
rs1398821538 1636 dbSNP
rs1412202035 1637 dbSNP
rs1338036017 1640 dbSNP
rs1452457238 1650 dbSNP
rs1156242835 1653 dbSNP
rs1393528614 1654 dbSNP
rs564562150 1655 dbSNP
rs1387202096 1666 dbSNP
rs12460694 1670 dbSNP
rs572423438 1674 dbSNP
rs762968999 1675 dbSNP
rs772896241 1681 dbSNP
rs556116854 1682 dbSNP
rs1236979058 1684 dbSNP
rs1016950053 1686 dbSNP
rs1463480618 1688 dbSNP
rs11465406 1696 dbSNP
rs397897390 1696 dbSNP
rs796475184 1696 dbSNP
rs1170111730 1697 dbSNP
rs201094015 1697 dbSNP
rs1489807926 1701 dbSNP
rs11260028 1706 dbSNP
rs181874569 1708 dbSNP
rs997890618 1709 dbSNP
rs768293088 1712 dbSNP
rs1369758270 1714 dbSNP
rs556742276 1720 dbSNP
rs539640019 1721 dbSNP
rs893659269 1723 dbSNP
rs1308940655 1740 dbSNP
rs1370332968 1741 dbSNP
rs776109765 1743 dbSNP
rs1451182544 1748 dbSNP
rs571047910 1750 dbSNP
rs557387594 1752 dbSNP
rs1341184662 1754 dbSNP
rs1244109901 1759 dbSNP
rs1053674937 1762 dbSNP
rs534340413 1763 dbSNP
rs1319266517 1766 dbSNP
rs11465408 1771 dbSNP
rs1217544775 1775 dbSNP
rs1193769962 1777 dbSNP
rs1257783103 1783 dbSNP
rs190106388 1785 dbSNP
rs529216188 1786 dbSNP
rs1383926466 1793 dbSNP
rs1451952241 1795 dbSNP
rs187334590 1796 dbSNP
rs1372915650 1797 dbSNP
rs949488915 1798 dbSNP
rs919364392 1799 dbSNP
rs374694844 1800 dbSNP
rs549990133 1801 dbSNP
rs963854728 1802 dbSNP
rs1437265697 1809 dbSNP
rs1298217998 1812 dbSNP
rs909393873 1813 dbSNP
rs532944619 1819 dbSNP
rs867217755 1820 dbSNP
rs35705945 1821 dbSNP
rs1345200582 1825 dbSNP
rs564574231 1826 dbSNP
rs953672919 1832 dbSNP
rs11465409 1839 dbSNP
rs1261591360 1840 dbSNP
rs144176155 1841 dbSNP
rs562097599 1842 dbSNP
rs11465410 1846 dbSNP
rs113936914 1847 dbSNP
rs11465411 1848 dbSNP
rs1009331904 1849 dbSNP
rs386806502 1849 dbSNP
rs11465412 1855 dbSNP
rs1289407239 1858 dbSNP
rs546385583 1859 dbSNP
rs1380312998 1871 dbSNP
rs1053621492 1874 dbSNP
rs1458488221 1882 dbSNP
rs1238172634 1885 dbSNP
rs1197306670 1888 dbSNP
rs1463003651 1889 dbSNP
rs758293186 1898 dbSNP
rs748005219 1902 dbSNP
rs778958009 1910 dbSNP
rs560547049 1921 dbSNP
rs754714381 1922 dbSNP
rs905142903 1924 dbSNP
rs1046417524 1929 dbSNP
rs867765175 1933 dbSNP
rs1197589800 1935 dbSNP
rs949436384 1946 dbSNP
rs1457845689 1949 dbSNP
rs557449416 1952 dbSNP
rs919282168 1956 dbSNP
rs753730847 1957 dbSNP
rs1036823423 1963 dbSNP
rs1366004379 1965 dbSNP
rs1404065750 1968 dbSNP
rs11465413 1974 dbSNP
rs909385208 1987 dbSNP
rs1223858677 2003 dbSNP
rs1314600853 2009 dbSNP
rs1224496471 2010 dbSNP
rs181926571 2011 dbSNP
rs1266519041 2014 dbSNP
rs1377352469 2029 dbSNP
rs555389378 2032 dbSNP
rs1220661547 2039 dbSNP
rs1254245206 2042 dbSNP
rs1308169895 2047 dbSNP
rs535097059 2050 dbSNP
rs188051185 2054 dbSNP
rs549762603 2063 dbSNP
rs953618673 2068 dbSNP
rs1425599937 2070 dbSNP
rs1166866035 2072 dbSNP
rs1366059934 2084 dbSNP
rs923550309 2085 dbSNP
rs1300992759 2089 dbSNP
rs976381242 2092 dbSNP
rs965388174 2093 dbSNP
rs1413960171 2106 dbSNP
rs1400411896 2107 dbSNP
rs539665911 2123 dbSNP
rs367767330 2124 dbSNP
rs183638737 2125 dbSNP
rs1009691648 2126 dbSNP
rs957850789 2129 dbSNP
rs1177111105 2130 dbSNP
rs1474075931 2133 dbSNP
rs866363590 2134 dbSNP
rs1182461896 2144 dbSNP
rs1210268789 2146 dbSNP
rs1444007277 2149 dbSNP
rs143217457 2151 dbSNP
rs1391835763 2152 dbSNP
rs1276144553 2163 dbSNP
rs578064749 2164 dbSNP
rs1218342169 2165 dbSNP
rs1410297220 2183 dbSNP
rs1169351420 2185 dbSNP
rs562158673 2192 dbSNP
rs1449607116 2193 dbSNP
rs1336890963 2201 dbSNP
rs1285067908 2202 dbSNP
rs148341013 2203 dbSNP
rs11465414 2207 dbSNP
rs1340537652 2213 dbSNP
rs1214299609 2228 dbSNP
rs1314097080 2232 dbSNP
rs1284699261 2234 dbSNP
rs1242673176 2241 dbSNP
rs1447483469 2247 dbSNP
rs1024872676 2248 dbSNP
rs1181725533 2248 dbSNP
rs1249776511 2250 dbSNP
rs1475633181 2273 dbSNP
rs1300054019 2274 dbSNP
rs1013514965 2284 dbSNP
rs1415876078 2285 dbSNP
rs1176674956 2290 dbSNP
rs115539852 2300 dbSNP
rs1323164428 2310 dbSNP
rs1327469869 2322 dbSNP
rs746715607 2346 dbSNP
rs1430466272 2348 dbSNP
rs767163640 2349 dbSNP
rs1370168592 2354 dbSNP
rs942104214 2375 dbSNP
rs1224406146 2377 dbSNP
rs1262716530 2390 dbSNP
rs11465415 2391 dbSNP
rs1210621372 2396 dbSNP
rs1286280024 2397 dbSNP
rs1447447150 2419 dbSNP
rs1192364404 2421 dbSNP
rs1157269249 2423 dbSNP
rs1407412125 2426 dbSNP
rs11465416 2431 dbSNP
rs1428102433 2432 dbSNP
rs1181787049 2433 dbSNP
rs1479177960 2439 dbSNP
rs932128980 2444 dbSNP
rs1254788577 2448 dbSNP
rs1195148133 2453 dbSNP
rs1385046174 2454 dbSNP
rs923455572 2470 dbSNP
rs976706137 2473 dbSNP
rs1352024772 2480 dbSNP
rs946323308 2483 dbSNP
rs1282909920 2486 dbSNP
rs1230311713 2491 dbSNP
rs560344977 2493 dbSNP
rs987858743 2495 dbSNP
rs957759928 2503 dbSNP
rs878960476 2504 dbSNP
rs1032116647 2513 dbSNP
rs1490785455 2515 dbSNP
rs1323286121 2522 dbSNP
rs879074669 2523 dbSNP
rs1227685897 2526 dbSNP
rs540425317 2531 dbSNP
rs969180432 2540 dbSNP
rs1469155877 2541 dbSNP
rs113790757 2545 dbSNP
rs191503190 2546 dbSNP
rs1024818869 2550 dbSNP
rs1400656004 2565 dbSNP
rs11465417 2568 dbSNP
rs11465418 2570 dbSNP
rs1006246175 2571 dbSNP
rs1050441868 2572 dbSNP
rs988113364 2574 dbSNP
rs11465419 2575 dbSNP
rs11465420 2577 dbSNP
rs1246616940 2583 dbSNP
rs539776558 2586 dbSNP
rs1404117136 2588 dbSNP
rs979218325 2589 dbSNP
rs570736811 2592 dbSNP
rs1197226946 2593 dbSNP
rs759755366 2594 dbSNP
rs112559811 2595 dbSNP
rs185545863 2597 dbSNP
rs1013736791 2598 dbSNP
rs777069535 2599 dbSNP
rs1014997078 2600 dbSNP
rs1463812613 2603 dbSNP
rs1489224621 2605 dbSNP
rs1395966399 2607 dbSNP
rs1004477152 2615 dbSNP
rs887321773 2624 dbSNP
rs11465421 2629 dbSNP
rs931453588 2632 dbSNP
rs1453350156 2639 dbSNP
rs548344631 2646 dbSNP
rs11465422 2647 dbSNP
rs1219386325 2648 dbSNP
rs1039813406 2661 dbSNP
rs1338271823 2664 dbSNP
rs1193718008 2666 dbSNP
rs192584788 2672 dbSNP
rs944116844 2690 dbSNP
rs962252444 2700 dbSNP
rs772117329 2709 dbSNP
rs186612602 2710 dbSNP
rs182264960 2729 dbSNP
rs190036112 2733 dbSNP
rs1460709724 2734 dbSNP
rs1178826093 2740 dbSNP
rs113300854 2758 dbSNP
rs865814144 2759 dbSNP
rs188180193 2760 dbSNP
rs1023473322 2763 dbSNP
rs1383713599 2764 dbSNP
rs1296118665 2766 dbSNP
rs11465423 2773 dbSNP
rs960703648 2775 dbSNP
rs952014647 2776 dbSNP
rs778710154 2781 dbSNP
rs1465502925 2783 dbSNP
rs1323649410 2785 dbSNP
rs1202418722 2790 dbSNP
rs1028953289 2793 dbSNP
rs1422313175 2794 dbSNP
rs4804800 2797 dbSNP
rs901969376 2817 dbSNP
rs1434580202 2819 dbSNP
rs879759833 2826 dbSNP
rs1201902192 2840 dbSNP
rs1272531862 2859 dbSNP
rs1430189702 2862 dbSNP
rs1480159325 2863 dbSNP
rs887374123 2864 dbSNP
rs561843078 2865 dbSNP
rs1199166522 2866 dbSNP
rs1455339432 2868 dbSNP
rs535614159 2870 dbSNP
rs374414781 2871 dbSNP
rs1345673440 2881 dbSNP
rs541525999 2890 dbSNP
rs1010426449 2895 dbSNP
rs900049165 2899 dbSNP
rs891977049 2900 dbSNP
rs550052955 2901 dbSNP
rs58127026 2915 dbSNP
rs936243568 2916 dbSNP
rs1260608762 2919 dbSNP
rs539437036 2935 dbSNP
rs1485111356 2936 dbSNP
rs1225114824 2937 dbSNP
rs924900396 2940 dbSNP
rs11465425 2942 dbSNP
rs1457219806 2943 dbSNP
rs766254300 2944 dbSNP
rs1410325940 2945 dbSNP
rs947775134 2960 dbSNP
rs1212279338 2962 dbSNP
rs1417635154 2967 dbSNP
rs554066504 2971 dbSNP
rs1313038733 2975 dbSNP
rs1052461530 2991 dbSNP
rs1404004239 2997 dbSNP
rs917699258 3002 dbSNP
rs1374921304 3003 dbSNP
rs868481223 3005 dbSNP
rs935350761 3018 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ucgguCGGUUGAGUGUCACGUcu 5'
               ||||:  :: ||||||  
Target 5' cugucGCCAGGCUGGAGUGCA-- 3'
16 - 36
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903829
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_a
Location of target site NM_021155 | 3UTR | GCUCUGUCGCCAGGCUGGAGUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903832
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_b
Location of target site NM_001144895 | 3UTR | GCUCUGUCGCCAGGCUGGAGUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_021155 | 3UTR | GUCUUGCUCUGUCGCCAGGCUGGAGUGCAGUGGCGCGAUCUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_021155 | 3UTR | GUCUUGCUCUGUCGCCAGGCUGGAGUGCAGUGGCGCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_021155 | 3UTR | CUUGCUCUGUCGCCAGGCUGGAGUGCAGUGGCGCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_021155 | 3UTR | CUUGCUCUGUCGCCAGGCUGGAGUGCAGUGGCGCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_021155 | 3UTR | UCUUGCUCUGUCGCCAGGCUGGAGUGCAGUGGCGCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_021155 | 3UTR | GGGGUCUUGCUCUGUCGCCAGGCUGGAGUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000301357.8 | 3UTR | AGAUGGGGUCUUGCUCUGUCGCCAGGCUGGAGUGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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