pre-miRNA Information
pre-miRNA hsa-mir-6819   
Genomic Coordinates chr22: 36286847 - 36286907
Description Homo sapiens miR-6819 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6819-3p
Sequence 41| AAGCCUCUGUCCCCACCCCAG |61
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1279530967 2 dbSNP
rs967579979 3 dbSNP
rs776891214 4 dbSNP
rs771166635 8 dbSNP
rs747037324 9 dbSNP
rs879248090 11 dbSNP
rs1485325191 12 dbSNP
rs778157316 16 dbSNP
Putative Targets

Gene Information
Gene Symbol PKHD1   
Synonyms ARPKD, FCYT, FPC, PKD4, TIGM1
Description PKHD1, fibrocystin/polyductin
Transcript NM_138694   
Other Transcripts NM_170724   
Expression
Putative miRNA Targets on PKHD1
3'UTR of PKHD1
(miRNA target sites are highlighted)
>PKHD1|NM_138694|3'UTR
   1 TCAGGGAAGTTGGGGGCATTTGGCCTGAAAGGCAGAATGTTCCCAGTATTTCTGGATAATAAGCTGGGGAAGTGAGGACT
  81 GTCCTGCTGGGACAACTAAGAAGAGAGAATGTGGACTCTGAATCCCTTTTTCAACTTTAAAATGGAAAACAGTCATATAA
 161 ATGCTTACAGACTGAAAAATGTCTCATACATATTTTGCAGCTATCATGATCCTAGTTCAATGCTAGGCAAATAATGGCAC
 241 TTGTTAATTATTTACCAGTTTTTAACTTAAGCCTGATTTTAACAACTTGATAATGGTGTAATACTGACTTATACCAGCAG
 321 GGGTTATTATTAAGCATTCTCTGGATTGACCACCCACAATGCTTTGAGCTTCTTTTATAGAAGGGATCATGAAAAGGTCT
 401 GGTCAGCTACAGTTTAATTCCACACTGTTACAGAAAAGCATTTCTTTATCCTGTAGTAGCATTTGAAGGGACAGTTCAAC
 481 ACCCTGCTCCCTGATCTGTCAGAGCTTACCTTCCAACCACAAGGCAACTTCCTGGCTTTTTACAAGTGGATTTTATTTCA
 561 TGGTTTAAATTCAATCATTATTGAGAACCTACAGTAGTGTGAGCGTATCAAATTTGCACTTCATGAGGATTTACACATGA
 641 AAATTGATATTCTCATGGGCTTTGCTGAGAGTTTAGTTAAGGACAAAGATGTAAAAATGCCAAATTTGGGAAAGGAAATT
 721 TTGTATGACCACTGTTCTATTTTTCAGTGATTCTCTCTGTTAGTAGCTGGGTCACATTTACAACTGGAAAAGAACTACAT
 801 TGGGAGATCAGAGAAAGCCAAGTGGCCAAGTCCTTTATCAAAAAGCTGCTTTTTGGAGAAGATGATGCATAAAGCTGTGA
 881 TACTAAGGAGAGGAGAGATTATGTCATATGCAACTGCTCTAGGCTGTGCAGGGGGTTTAAATGGAGATCAGAACAAAGGC
 961 TCACCTGGTATTGATACATTTGGTAAGGTTGTTAAAGGCAATTTCACCAAATTCACACATTTGTACGGGGCCCATTTCTT
1041 TTCAAACTGAAGAATACTTTAAACAGCCTGACTGTGTCCTTGGCTCTGGATCCAGAAGGCCTTATGCTCCAAGCATGTAA
1121 AGAAAAGATCGCAGGAATGTGGAGAGCTTCCAAAAAGAGATTGCTCTCAGATTTTCCTGAAAATCCTGAAAACCAGGATT
1201 TTCCAATCTCTACAATGTTAAGGGGTTGTTGTGTAGTTGCATTGGAAGAGAGAAAGGAAACACACTCTTTCATTGCTGAA
1281 TTCTAAATAATGATGCCCTGAATTAGTTCTATGAGAAGTACTGGCAGACAGCTGTTATGTCTGCAGGGCATCAAGGGGCA
1361 GGTGTGTCTCACCCTACTAAGAATTGGCAGAAATGTTTTAACCTCTTCTTTAGGCATCTGGTGAGTATTGCAGATCTTCA
1441 GGCTGTCCCTAAAAGGAGGTAGGTAGCCTTCTCTGTGGTCACTGTGTTGGATTTGGAAGAAAATATAAGTAGATGTTAAG
1521 GTCAGTGCTCTCCAGGAGATTTCAATCCAGGCTATCTGTGTTCAGGGAATGATTTGCAAGAAGTTGGTTTATAGACGTTT
1601 ACTCTGGAGGCACAAGCTGGCTGCCATGCTGAGTAAGTCCTCTTTGTAGATGATGTATTTTGCTTGGGCACCAACAGAAT
1681 TAAAAACGAAAAACAAAAAAAAACTCGAATGACTTAGGCAGAACATGCCTTCCCTAGTTTAATTAGTCCCTGTTATAACC
1761 AGTTATTTATCTTTTTTTGTAGATTCTCGGTCTTGAAGTCATTTGCCTTTGCAATCTCTACTTTAGTATACTCATTGGAT
1841 CCTCAAAGAGCCGTAAGCTTTTTGGAAAAAAACATTTCAGAAGTGAAGGCTTTTGAGGTTTATAAAATGGTAGCAGTCTT
1921 AGTCCTTGCCCTGCCTCAGTTTACCTGCACATGCTTTCTTTCATTTCCTCGGATTCTTTCACCACTTTTTAAGTTTTTTT
2001 TCCACAGGTATTTTTCCTGAGCTCTATACCATGCATTTAGCTGCCTAGTGAGAATATCCAGTAGGTTATCCTATAGTTAC
2081 TATGAAGTTAACACAGCCCAAAAACCTACTTCTCCTTGTGTTTTTTTCCAACTCAATGAATGACATCACTGCACTCAGAC
2161 CAGAAATCTAGAAGTCAGTCATGACTCTTCATTCTATTTCGCCCTTCACAAAGAGTTAGCTGCCAGCTCTGTTATTTCTG
2241 CCCCTTCTTTACCCTTCTTCCAATTTTTATTATCTTCTTATTTATCCTCTATGTGTCACAAGACCAGTCTTTCTGGGAGG
2321 CATGTTTTATCCTATCCCTCTGCGTAGGAATAACCATAATTATCTTACTAATTCCATCCCAGAAAAGCCTGTGATCCCTG
2401 AGGCCAGAATTGACTCTTTGGGCCTAAATAGCAGCTATAAACATCTTCAGTAACTTGCCAGGCTCTAGCATGTGGCATGG
2481 AATTTTGGCATCTAGCTAAAATTCCTCAACCCATAGTTAAGCTACTCCTCTTTCTCCTAAAAAAAAAAAAAAATGAGAGA
2561 ATTAGGGAAACACCAAAAGCAAAGAGAGCAGCTCTATGTTCATTCATGTCTGGAGATGAGCCAATTTGAGCACCACTGTA
2641 GGCCAACTCTAAATTTATTCAGATCGTTAACATGGGTAACCCAGCAAATATTTCCCAGCAGTGACAATCTACACCCTTTA
2721 TCTAAATAAATATTGAGATGTGCTTTTTTCCTGTGTTAGTTCAAAGAATCTCTTCTTGCCTCCCATTGCTGATTTTCTGT
2801 ATTGATGGACTCATTTCTCTCAAGAGATTGGACAAGCTAAAATTCTAGAGAGTTCAAAAGTGTTTGAAAGTACATTTTAA
2881 GTGTTCTCACCACAAAAAATGCTAGTGTGTGAGGTGATACATATGTTAATTAGTTCAACTGATCCATTCCACAATGTATA
2961 CATATTTCAAACTATCGAGTTGTACATGATAAATATATACAATTTTTATTTGTCAAATAAAGAACATCTATAAATATTTA
3041 TAGATTTCAAAATTGAGAAAGAAGTATATATGGAGCCACGGTTGTTTTGACCATTTCTCCATGCTTTTTGTTTGGGGAGG
3121 GGGACATTTTTTGGGGGGCAGGGACTGTGTTCAGGGAAAGTACCTGACCAACAGAACTTCAAGTCTCTTCCAGAGTGCGA
3201 GACTCAGCTTATCTGATCAAGGTGAACTTGCCCTTCAATAGACTTGCCCTTGTTACTGCCCAGTGAGGCCACCAAGGACC
3281 AAGAACAGTTGAGCTCTCTCAGGGCCTTCCCCTTTCAACAATTTAGTTGAATGACTCCCTTCCATCTATCAGTCTTACTC
3361 CAAATATATGAAATTACTATACATTGAAATGCCTGCAAACTATATGCAAAAATGAGTATGAGGAAATCAAATGTAAATCA
3441 TATGCAAATATTATTCAACCAAGCTTCTATAAAATTGTACGTGTCAATAACAGTAAAGAATTTTAATTAATTCTGTCATT
3521 TAAAATTCATGCATTCCATATTTTGCTTTCAGAACTTATAGTCTATGCCAATTTTGAAAAAACTATAAGCACAAGGAATT
3601 AAATACTATTGAGTATAGAACTGTTGATTTCAACATACACTATAGCACTTTGACTAATTACAGATATATTTGATAGAAAA
3681 GTCACATTTCTACAAGGTAATTTTCAAAAAGAAATAAAACATTTCTGTAAACTT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaCCCCACCCCUGUCUCCGAa 5'
            | | |  | ||| ||||| 
Target 5' tgGAGATCAGAACAAAGGCTc 3'
942 - 962 123.00 -10.10
2
miRNA  3' gaccccaCCCCUGUCUCCGAa 5'
                 ||||:|||:| || 
Target 5' ttttttgGGGGGCAGGGACTg 3'
3127 - 3147 118.00 -19.30
3
miRNA  3' gaccccaccccUGUCUCCGAa 5'
                     :|||:||:| 
Target 5' gacttataccaGCAGGGGTTa 3'
306 - 326 114.00 -9.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
911952 1 ClinVar
357401 27 ClinVar
357400 220 ClinVar
911951 232 ClinVar
357399 308 ClinVar
357398 374 ClinVar
910734 604 ClinVar
357397 636 ClinVar
357396 760 ClinVar
357395 780 ClinVar
910733 822 ClinVar
910732 918 ClinVar
357394 934 ClinVar
910731 1001 ClinVar
357393 1005 ClinVar
357392 1023 ClinVar
909836 1027 ClinVar
357391 1083 ClinVar
909835 1130 ClinVar
357390 1154 ClinVar
357389 1217 ClinVar
909834 1244 ClinVar
357388 1257 ClinVar
357387 1335 ClinVar
357386 1376 ClinVar
357385 1381 ClinVar
908964 1450 ClinVar
357384 1498 ClinVar
357383 1525 ClinVar
357382 1559 ClinVar
357381 1589 ClinVar
908963 1592 ClinVar
911904 1596 ClinVar
357380 1597 ClinVar
911903 1637 ClinVar
357379 1749 ClinVar
357378 1789 ClinVar
357377 1933 ClinVar
357376 2031 ClinVar
911902 2064 ClinVar
357375 2082 ClinVar
910672 2086 ClinVar
357374 2201 ClinVar
357373 2208 ClinVar
357372 2305 ClinVar
357371 2331 ClinVar
910671 2443 ClinVar
910670 2463 ClinVar
357369 2554 ClinVar
357370 2554 ClinVar
357368 2564 ClinVar
357367 2580 ClinVar
909761 2665 ClinVar
909760 2666 ClinVar
909759 2716 ClinVar
357366 2857 ClinVar
357365 2922 ClinVar
357364 2967 ClinVar
909758 2976 ClinVar
357363 3025 ClinVar
357362 3026 ClinVar
908896 3030 ClinVar
908895 3044 ClinVar
908894 3138 ClinVar
908893 3171 ClinVar
357361 3269 ClinVar
357360 3323 ClinVar
357359 3345 ClinVar
911841 3379 ClinVar
357358 3393 ClinVar
357357 3444 ClinVar
357356 3513 ClinVar
357355 3520 ClinVar
COSN30457093 2 COSMIC
COSN30490451 5 COSMIC
COSN30524618 12 COSMIC
COSN24406071 16 COSMIC
COSN26989225 24 COSMIC
COSN26603699 39 COSMIC
COSN30184682 43 COSMIC
COSN30454467 44 COSMIC
COSN30102343 48 COSMIC
COSN30124221 65 COSMIC
COSN30502201 92 COSMIC
COSN30106650 97 COSMIC
COSN31599127 100 COSMIC
COSN31525027 107 COSMIC
COSN30107888 135 COSMIC
COSN30101755 185 COSMIC
COSN7886298 207 COSMIC
COSN9908790 226 COSMIC
COSN27059084 308 COSMIC
COSN7791583 437 COSMIC
COSN22527720 473 COSMIC
COSN6323784 735 COSMIC
COSN24885872 798 COSMIC
COSN17806652 893 COSMIC
COSN16879382 1074 COSMIC
COSN18899615 1245 COSMIC
COSN30387418 1327 COSMIC
COSN28162847 1449 COSMIC
COSN22224763 1544 COSMIC
COSN7791582 1545 COSMIC
COSN32057436 1721 COSMIC
COSN2166036 1769 COSMIC
COSN32063233 1972 COSMIC
COSN9312609 2214 COSMIC
COSN15293573 2280 COSMIC
COSN9796829 2298 COSMIC
COSN18808479 2407 COSMIC
COSN20102934 2538 COSMIC
COSN20102935 2539 COSMIC
COSN30269208 2793 COSMIC
COSN7791581 2892 COSMIC
COSN18808478 2944 COSMIC
COSN5088953 3017 COSMIC
COSN28201101 3167 COSMIC
COSN32062779 3329 COSMIC
COSN32069229 3426 COSMIC
COSN9796828 3436 COSMIC
COSN26739918 3480 COSMIC
COSN4955913 3513 COSMIC
COSN28462576 3531 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs369623770 1 dbSNP
rs765681328 3 dbSNP
rs1234347196 6 dbSNP
rs368932817 18 dbSNP
rs776862002 21 dbSNP
rs1294793896 23 dbSNP
rs764352165 27 dbSNP
rs761039344 32 dbSNP
rs1224025430 38 dbSNP
rs553690431 39 dbSNP
rs772323148 43 dbSNP
rs917037048 44 dbSNP
rs560200767 67 dbSNP
rs1454731566 68 dbSNP
rs1431726457 73 dbSNP
rs1340120458 74 dbSNP
rs1332566705 76 dbSNP
rs1409821264 84 dbSNP
rs540161801 85 dbSNP
rs1016321984 88 dbSNP
rs1433879481 92 dbSNP
rs1398163143 93 dbSNP
rs1004945813 111 dbSNP
rs1324757989 115 dbSNP
rs1376503532 125 dbSNP
rs1442392452 129 dbSNP
rs1036832833 154 dbSNP
rs138142029 156 dbSNP
rs886512398 157 dbSNP
rs1046581470 163 dbSNP
rs949580497 171 dbSNP
rs1169162674 175 dbSNP
rs1319646701 180 dbSNP
rs554483952 181 dbSNP
rs1475512294 185 dbSNP
rs537635648 197 dbSNP
rs939873716 198 dbSNP
rs1055749670 212 dbSNP
rs751649423 220 dbSNP
rs576158165 229 dbSNP
rs147372425 232 dbSNP
rs945815475 237 dbSNP
rs912985335 244 dbSNP
rs974752413 263 dbSNP
rs987325783 273 dbSNP
rs966090395 292 dbSNP
rs1018992755 293 dbSNP
rs539505692 296 dbSNP
rs1275147427 304 dbSNP
rs570760306 308 dbSNP
rs1028924324 309 dbSNP
rs1033651299 314 dbSNP
rs547740998 333 dbSNP
rs1376701297 336 dbSNP
rs867644529 353 dbSNP
rs1282658303 355 dbSNP
rs34604736 356 dbSNP
rs1000439341 359 dbSNP
rs534237629 362 dbSNP
rs2784201 374 dbSNP
rs1215691211 379 dbSNP
rs1356466043 385 dbSNP
rs1282273873 394 dbSNP
rs750640413 397 dbSNP
rs1022629867 427 dbSNP
rs1244280536 435 dbSNP
rs1474463827 440 dbSNP
rs1307861202 445 dbSNP
rs1187672359 450 dbSNP
rs1418172735 455 dbSNP
rs1462671392 473 dbSNP
rs1013938102 477 dbSNP
rs765005592 498 dbSNP
rs1400713160 506 dbSNP
rs1408486076 519 dbSNP
rs1357357657 524 dbSNP
rs1413986723 532 dbSNP
rs1293661108 540 dbSNP
rs1357080229 545 dbSNP
rs1235404974 550 dbSNP
rs1277934006 551 dbSNP
rs895529738 556 dbSNP
rs963247377 568 dbSNP
rs1356820089 569 dbSNP
rs1036803147 571 dbSNP
rs1330230402 572 dbSNP
rs1410052606 577 dbSNP
rs1016247927 583 dbSNP
rs1258678155 584 dbSNP
rs1004832722 588 dbSNP
rs1412514436 589 dbSNP
rs1476366007 601 dbSNP
rs41273720 604 dbSNP
rs191012530 605 dbSNP
rs1418283851 610 dbSNP
rs562615814 611 dbSNP
rs552311389 616 dbSNP
rs564602805 617 dbSNP
rs1377053373 623 dbSNP
rs532187384 624 dbSNP
rs1205238102 631 dbSNP
rs944709942 634 dbSNP
rs41273718 636 dbSNP
rs1287862586 646 dbSNP
rs540195238 654 dbSNP
rs1215763209 655 dbSNP
rs936950089 660 dbSNP
rs1234237951 662 dbSNP
rs1281582163 666 dbSNP
rs574679899 675 dbSNP
rs561216820 685 dbSNP
rs988923574 689 dbSNP
rs956347948 694 dbSNP
rs904098839 697 dbSNP
rs1392761973 708 dbSNP
rs1042786261 725 dbSNP
rs1174200294 727 dbSNP
rs1396800400 729 dbSNP
rs1226943830 731 dbSNP
rs979374583 735 dbSNP
rs1396103996 738 dbSNP
rs945658199 739 dbSNP
rs1331084573 747 dbSNP
rs1280632020 753 dbSNP
rs912995111 755 dbSNP
rs886061607 760 dbSNP
rs1350645130 761 dbSNP
rs1023226900 762 dbSNP
rs1251133182 763 dbSNP
rs1348764918 779 dbSNP
rs886061606 780 dbSNP
rs760214166 781 dbSNP
rs921785163 793 dbSNP
rs1193710189 795 dbSNP
rs759261769 806 dbSNP
rs1015706950 819 dbSNP
rs974589280 822 dbSNP
rs1169595978 832 dbSNP
rs963297586 834 dbSNP
rs888230183 837 dbSNP
rs1048214610 845 dbSNP
rs1392536376 846 dbSNP
rs932484015 848 dbSNP
rs1394804530 855 dbSNP
rs1433966346 856 dbSNP
rs1158060698 858 dbSNP
rs1369760526 860 dbSNP
rs1417098759 863 dbSNP
rs1409965991 865 dbSNP
rs899718713 866 dbSNP
rs1327404804 875 dbSNP
rs1040957536 878 dbSNP
rs539014573 880 dbSNP
rs1016132008 882 dbSNP
rs1477684262 897 dbSNP
rs1245005675 900 dbSNP
rs1195611232 917 dbSNP
rs544051183 918 dbSNP
rs911879443 919 dbSNP
rs575104785 920 dbSNP
rs754683164 922 dbSNP
rs1484584227 931 dbSNP
rs558281379 934 dbSNP
rs934755506 936 dbSNP
rs1430142929 951 dbSNP
rs1416026084 959 dbSNP
rs577962249 959 dbSNP
rs1025068275 962 dbSNP
rs1475017824 975 dbSNP
rs1014062374 977 dbSNP
rs1351695762 978 dbSNP
rs1451649549 998 dbSNP
rs1288856902 999 dbSNP
rs926038607 1001 dbSNP
rs41273716 1005 dbSNP
rs970232484 1007 dbSNP
rs1285444924 1008 dbSNP
rs1355165959 1016 dbSNP
rs1219138503 1019 dbSNP
rs1023195781 1022 dbSNP
rs185962129 1023 dbSNP
rs745560749 1026 dbSNP
rs960304347 1027 dbSNP
rs904110138 1030 dbSNP
rs562035678 1031 dbSNP
rs1042630726 1034 dbSNP
rs1256584103 1047 dbSNP
rs1485840060 1055 dbSNP
rs1188943691 1079 dbSNP
rs376414551 1083 dbSNP
rs1417477152 1086 dbSNP
rs1158439025 1100 dbSNP
rs1346720295 1106 dbSNP
rs891432950 1107 dbSNP
rs1364931011 1114 dbSNP
rs1422082726 1116 dbSNP
rs952459900 1121 dbSNP
rs867275235 1122 dbSNP
rs1375226471 1124 dbSNP
rs181120541 1130 dbSNP
rs1027151227 1131 dbSNP
rs189641362 1137 dbSNP
rs774050235 1139 dbSNP
rs1222745221 1141 dbSNP
rs899689049 1152 dbSNP
rs548889112 1154 dbSNP
rs71727191 1160 dbSNP
rs1247559530 1161 dbSNP
rs1279454751 1161 dbSNP
rs1039316973 1164 dbSNP
rs941828254 1168 dbSNP
rs1212751830 1171 dbSNP
rs1239473961 1171 dbSNP
rs1479769056 1177 dbSNP
rs1176782138 1192 dbSNP
rs909140528 1196 dbSNP
rs770116651 1206 dbSNP
rs1441549833 1213 dbSNP
rs1172331376 1215 dbSNP
rs886061605 1217 dbSNP
rs950736854 1224 dbSNP
rs1178646696 1230 dbSNP
rs1352449128 1236 dbSNP
rs1441070799 1238 dbSNP
rs1053093535 1239 dbSNP
rs917933676 1244 dbSNP
rs1302665401 1248 dbSNP
rs1348465202 1249 dbSNP
rs926037654 1250 dbSNP
rs886061604 1257 dbSNP
rs1306662769 1259 dbSNP
rs1204096581 1261 dbSNP
rs1258889722 1264 dbSNP
rs185586052 1267 dbSNP
rs992166276 1269 dbSNP
rs1252963399 1271 dbSNP
rs1455065869 1272 dbSNP
rs959762017 1277 dbSNP
rs1417823998 1284 dbSNP
rs1235746858 1290 dbSNP
rs1347970097 1296 dbSNP
rs1409694825 1298 dbSNP
rs1033732754 1301 dbSNP
rs569478140 1313 dbSNP
rs1001044002 1315 dbSNP
rs1296294326 1316 dbSNP
rs968181000 1318 dbSNP
rs1459451767 1321 dbSNP
rs1324609552 1325 dbSNP
rs993038430 1334 dbSNP
rs886061603 1335 dbSNP
rs542249918 1339 dbSNP
rs1371034388 1342 dbSNP
rs1380119200 1348 dbSNP
rs1363676552 1364 dbSNP
rs370204622 1374 dbSNP
rs113690658 1375 dbSNP
rs886061602 1376 dbSNP
rs573219087 1381 dbSNP
rs952501555 1384 dbSNP
rs781578806 1386 dbSNP
rs1026705400 1395 dbSNP
rs1211952288 1401 dbSNP
rs1299494074 1402 dbSNP
rs1435306099 1422 dbSNP
rs1272648749 1430 dbSNP
rs755494395 1450 dbSNP
rs963786922 1451 dbSNP
rs1240854860 1454 dbSNP
rs1019403799 1459 dbSNP
rs1475333004 1461 dbSNP
rs553474519 1462 dbSNP
rs1168457755 1467 dbSNP
rs1425390632 1472 dbSNP
rs532123295 1475 dbSNP
rs1474035187 1478 dbSNP
rs1008023276 1484 dbSNP
rs1394582644 1492 dbSNP
rs886061601 1498 dbSNP
rs1420500256 1505 dbSNP
rs1344529834 1517 dbSNP
rs6941633 1525 dbSNP
rs1038724843 1526 dbSNP
rs941878941 1528 dbSNP
rs909024576 1545 dbSNP
rs1260139073 1554 dbSNP
rs546309551 1559 dbSNP
rs76147969 1560 dbSNP
rs904511257 1563 dbSNP
rs1043105362 1567 dbSNP
rs1230098117 1570 dbSNP
rs1282823691 1580 dbSNP
rs1446911624 1587 dbSNP
rs886061600 1589 dbSNP
rs1288662627 1592 dbSNP
rs555042069 1596 dbSNP
rs116233809 1597 dbSNP
rs1186795144 1607 dbSNP
rs916034699 1613 dbSNP
rs1057283957 1616 dbSNP
rs372390102 1620 dbSNP
rs1407228244 1623 dbSNP
rs1401238864 1629 dbSNP
rs77227361 1637 dbSNP
rs1373411535 1640 dbSNP
rs758543780 1642 dbSNP
rs926715526 1649 dbSNP
rs1341262006 1650 dbSNP
rs750666777 1651 dbSNP
rs1247150907 1652 dbSNP
rs1277881120 1654 dbSNP
rs1350000025 1656 dbSNP
rs979488526 1657 dbSNP
rs968107419 1667 dbSNP
rs1346234136 1678 dbSNP
rs770054328 1687 dbSNP
rs748247345 1688 dbSNP
rs1443766370 1693 dbSNP
rs1415275088 1694 dbSNP
rs919566905 1703 dbSNP
rs577799906 1704 dbSNP
rs975087467 1704 dbSNP
rs1296461492 1706 dbSNP
rs1433912435 1707 dbSNP
rs1463602538 1708 dbSNP
rs1373777297 1712 dbSNP
rs575165631 1713 dbSNP
rs1172929176 1723 dbSNP
rs1398041288 1725 dbSNP
rs1327024436 1727 dbSNP
rs1164340440 1728 dbSNP
rs776924130 1742 dbSNP
rs1447589545 1743 dbSNP
rs1312179000 1746 dbSNP
rs886061599 1749 dbSNP
rs558496648 1752 dbSNP
rs753631515 1762 dbSNP
rs1256976135 1764 dbSNP
rs1472511776 1788 dbSNP
rs763964515 1789 dbSNP
rs1249049850 1795 dbSNP
rs1029874352 1814 dbSNP
rs1198137136 1816 dbSNP
rs986573829 1820 dbSNP
rs1251117718 1822 dbSNP
rs1453751282 1826 dbSNP
rs564751307 1835 dbSNP
rs1481323890 1837 dbSNP
rs997600028 1848 dbSNP
rs769028063 1852 dbSNP
rs760657931 1853 dbSNP
rs903809903 1856 dbSNP
rs1466241328 1857 dbSNP
rs1351861158 1858 dbSNP
rs1021630386 1859 dbSNP
rs181486273 1864 dbSNP
rs577294462 1865 dbSNP
rs1012927138 1866 dbSNP
rs1440861277 1867 dbSNP
rs150090821 1872 dbSNP
rs1225694720 1873 dbSNP
rs1269272095 1873 dbSNP
rs938833390 1873 dbSNP
rs1200091062 1875 dbSNP
rs887260081 1882 dbSNP
rs887513336 1890 dbSNP
rs529534520 1892 dbSNP
rs1047249732 1894 dbSNP
rs1047595725 1913 dbSNP
rs1233682971 1922 dbSNP
rs1349734593 1923 dbSNP
rs975010597 1928 dbSNP
rs1192159285 1930 dbSNP
rs886061598 1933 dbSNP
rs574786281 1934 dbSNP
rs189101308 1937 dbSNP
rs775375717 1944 dbSNP
rs767081511 1948 dbSNP
rs1392379510 1950 dbSNP
rs1457419674 1955 dbSNP
rs759035032 1970 dbSNP
rs938029892 1971 dbSNP
rs956508188 1978 dbSNP
rs1297996612 1995 dbSNP
rs748879859 1996 dbSNP
rs1165992182 1998 dbSNP
rs926634397 2001 dbSNP
rs1166032336 2002 dbSNP
rs1457028184 2003 dbSNP
rs1333596447 2004 dbSNP
rs1031251720 2008 dbSNP
rs1267186912 2010 dbSNP
rs1484838247 2021 dbSNP
rs560346217 2024 dbSNP
rs773889294 2025 dbSNP
rs968338883 2026 dbSNP
rs886061597 2031 dbSNP
rs1420253241 2044 dbSNP
rs946818558 2045 dbSNP
rs1489110441 2047 dbSNP
rs1023557050 2050 dbSNP
rs141074474 2064 dbSNP
rs988310320 2074 dbSNP
rs79635571 2082 dbSNP
rs569538414 2086 dbSNP
rs1213994992 2087 dbSNP
rs1361591408 2093 dbSNP
rs887237658 2106 dbSNP
rs1349679845 2117 dbSNP
rs975666155 2124 dbSNP
rs1047666995 2133 dbSNP
rs559231448 2136 dbSNP
rs931506950 2137 dbSNP
rs1314271587 2144 dbSNP
rs1017251428 2147 dbSNP
rs1005833285 2158 dbSNP
rs1258786256 2159 dbSNP
rs1239343490 2162 dbSNP
rs1286575760 2170 dbSNP
rs887532855 2173 dbSNP
rs770575449 2180 dbSNP
rs1208425291 2183 dbSNP
rs1025987846 2196 dbSNP
rs1039945728 2200 dbSNP
rs535226662 2201 dbSNP
rs1182627109 2202 dbSNP
rs1258361298 2203 dbSNP
rs2784200 2208 dbSNP
rs1373360946 2209 dbSNP
rs1381470723 2215 dbSNP
rs546667750 2215 dbSNP
rs1456949009 2219 dbSNP
rs935070057 2225 dbSNP
rs1466257397 2228 dbSNP
rs923724403 2229 dbSNP
rs1383229711 2231 dbSNP
rs1370556959 2240 dbSNP
rs1445384906 2243 dbSNP
rs184699503 2254 dbSNP
rs1378998566 2259 dbSNP
rs1231930583 2263 dbSNP
rs967924518 2281 dbSNP
rs780515128 2285 dbSNP
rs1312491857 2286 dbSNP
rs916471124 2288 dbSNP
rs148166860 2290 dbSNP
rs960635834 2291 dbSNP
rs1178063175 2299 dbSNP
rs886061596 2305 dbSNP
rs1442107227 2318 dbSNP
rs76762827 2331 dbSNP
rs1452023270 2333 dbSNP
rs1254408958 2338 dbSNP
rs1002909027 2340 dbSNP
rs747582712 2343 dbSNP
rs368682518 2344 dbSNP
rs553715122 2345 dbSNP
rs1429050652 2349 dbSNP
rs193102652 2350 dbSNP
rs1438631677 2354 dbSNP
rs1274120482 2356 dbSNP
rs1279506493 2362 dbSNP
rs1220737654 2374 dbSNP
rs913995010 2376 dbSNP
rs988214678 2378 dbSNP
rs1316267675 2382 dbSNP
rs1198191277 2387 dbSNP
rs996050171 2388 dbSNP
rs1232073943 2392 dbSNP
rs1350102149 2394 dbSNP
rs934170547 2399 dbSNP
rs1039874993 2401 dbSNP
rs922816562 2403 dbSNP
rs1007095423 2413 dbSNP
rs975971405 2414 dbSNP
rs891414197 2415 dbSNP
rs564815142 2417 dbSNP
rs1051169286 2437 dbSNP
rs145917681 2443 dbSNP
rs528279720 2448 dbSNP
rs984430871 2450 dbSNP
rs1425169095 2455 dbSNP
rs1320619636 2468 dbSNP
rs10948637 2471 dbSNP
rs140656039 2475 dbSNP
rs112996394 2477 dbSNP
rs201097831 2487 dbSNP
rs1489368824 2488 dbSNP
rs1350369796 2494 dbSNP
rs1026040866 2505 dbSNP
rs1339549735 2516 dbSNP
rs923659880 2536 dbSNP
rs1396342470 2538 dbSNP
rs1043494568 2539 dbSNP
rs1320167874 2539 dbSNP
rs993284509 2544 dbSNP
rs1474837470 2552 dbSNP
rs76370389 2553 dbSNP
rs113144792 2554 dbSNP
rs1273546536 2554 dbSNP
rs916397757 2554 dbSNP
rs1162107863 2555 dbSNP
rs1194954871 2555 dbSNP
rs1447356027 2556 dbSNP
rs1413819266 2557 dbSNP
rs1414504 2564 dbSNP
rs1034895524 2566 dbSNP
rs574959312 2567 dbSNP
rs1486623359 2573 dbSNP
rs1342576467 2579 dbSNP
rs886061595 2580 dbSNP
rs1281077665 2588 dbSNP
rs1283706517 2589 dbSNP
rs905111927 2594 dbSNP
rs1357060416 2596 dbSNP
rs755564466 2622 dbSNP
rs1043629349 2624 dbSNP
rs1214068485 2626 dbSNP
rs745890904 2637 dbSNP
rs1010924250 2658 dbSNP
rs189302289 2665 dbSNP
rs77036429 2666 dbSNP
rs1440355093 2674 dbSNP
rs951426852 2684 dbSNP
rs184420773 2691 dbSNP
rs922669605 2698 dbSNP
rs375307302 2701 dbSNP
rs1379608066 2703 dbSNP
rs1026095427 2706 dbSNP
rs1332201742 2710 dbSNP
rs995587275 2714 dbSNP
rs1311498221 2716 dbSNP
rs1412986140 2720 dbSNP
rs1417112228 2738 dbSNP
rs1341206159 2750 dbSNP
rs1450295790 2755 dbSNP
rs1307769791 2763 dbSNP
rs1376595314 2766 dbSNP
rs1376787758 2768 dbSNP
rs1039910771 2769 dbSNP
rs1312889221 2771 dbSNP
rs962808507 2774 dbSNP
rs1408845961 2794 dbSNP
rs1288637526 2809 dbSNP
rs779037574 2813 dbSNP
rs757454327 2817 dbSNP
rs984316141 2818 dbSNP
rs559292691 2822 dbSNP
rs1007018668 2824 dbSNP
rs891337233 2832 dbSNP
rs1169254489 2833 dbSNP
rs1051366230 2836 dbSNP
rs1237545613 2841 dbSNP
rs1475565247 2848 dbSNP
rs1416834585 2852 dbSNP
rs999571122 2853 dbSNP
rs886061594 2857 dbSNP
rs1375734650 2858 dbSNP
rs1477568135 2860 dbSNP
rs1172284724 2873 dbSNP
rs1403146451 2876 dbSNP
rs1476109503 2881 dbSNP
rs951615822 2891 dbSNP
rs902166400 2900 dbSNP
rs372284729 2903 dbSNP
rs1258155581 2909 dbSNP
rs1203803644 2914 dbSNP
rs146856769 2922 dbSNP
rs972132281 2931 dbSNP
rs1329766864 2933 dbSNP
rs960527385 2938 dbSNP
rs1043808964 2945 dbSNP
rs1035144933 2953 dbSNP
rs946448144 2956 dbSNP
rs1196312109 2958 dbSNP
rs41273714 2967 dbSNP
rs145040289 2976 dbSNP
rs566441687 2977 dbSNP
rs1265180378 2978 dbSNP
rs1022238797 2986 dbSNP
rs536359782 2987 dbSNP
rs1379108270 2992 dbSNP
rs927842562 2997 dbSNP
rs1423019467 2998 dbSNP
rs1356566117 3008 dbSNP
rs546702680 3010 dbSNP
rs1389163610 3011 dbSNP
rs1279480517 3013 dbSNP
rs111452354 3016 dbSNP
rs983374630 3021 dbSNP
rs1440696129 3022 dbSNP
rs2771012 3025 dbSNP
rs2784199 3026 dbSNP
rs1040165348 3027 dbSNP
rs1277165962 3030 dbSNP
rs1465781393 3033 dbSNP
rs974077666 3039 dbSNP
rs41273712 3044 dbSNP
rs888640605 3045 dbSNP
rs1263665926 3057 dbSNP
rs1355589165 3060 dbSNP
rs1210321733 3061 dbSNP
rs1269203207 3069 dbSNP
rs1487150499 3075 dbSNP
rs1018314755 3079 dbSNP
rs1262734078 3092 dbSNP
rs985566728 3101 dbSNP
rs955554792 3106 dbSNP
rs1366742295 3111 dbSNP
rs1418394120 3118 dbSNP
rs1030274355 3120 dbSNP
rs187075029 3121 dbSNP
rs1398539955 3123 dbSNP
rs902804637 3124 dbSNP
rs1468586618 3133 dbSNP
rs1010585441 3134 dbSNP
rs894857837 3138 dbSNP
rs1182664067 3151 dbSNP
rs1468156611 3169 dbSNP
rs1351315009 3170 dbSNP
rs149167096 3171 dbSNP
rs1271490907 3176 dbSNP
rs1488751710 3182 dbSNP
rs1215858051 3183 dbSNP
rs551218419 3198 dbSNP
rs1335866119 3199 dbSNP
rs971760277 3207 dbSNP
rs1418309359 3218 dbSNP
rs938980879 3219 dbSNP
rs1222515506 3221 dbSNP
rs1361532073 3221 dbSNP
rs1455031880 3232 dbSNP
rs1300651391 3238 dbSNP
rs528329873 3240 dbSNP
rs906347308 3248 dbSNP
rs1396099786 3251 dbSNP
rs927748503 3267 dbSNP
rs1374541350 3268 dbSNP
rs886061593 3269 dbSNP
rs1239275560 3275 dbSNP
rs184286131 3278 dbSNP
rs758998885 3280 dbSNP
rs969108396 3291 dbSNP
rs751292630 3292 dbSNP
rs1022163599 3294 dbSNP
rs1244994793 3296 dbSNP
rs929230142 3304 dbSNP
rs989303537 3305 dbSNP
rs542423610 3310 dbSNP
rs773860956 3313 dbSNP
rs1442701445 3319 dbSNP
rs886061592 3323 dbSNP
rs1350233261 3326 dbSNP
rs1173596333 3332 dbSNP
rs956686383 3336 dbSNP
rs1358182491 3339 dbSNP
rs530251992 3345 dbSNP
rs561350073 3347 dbSNP
rs1397448017 3348 dbSNP
rs1410079127 3366 dbSNP
rs1331886685 3367 dbSNP
rs941381504 3369 dbSNP
rs1217234535 3376 dbSNP
rs750964586 3377 dbSNP
rs544667112 3379 dbSNP
rs2225240 3380 dbSNP
rs1299530259 3384 dbSNP
rs1159131426 3385 dbSNP
rs2784198 3393 dbSNP
rs762798534 3402 dbSNP
rs1456459763 3404 dbSNP
rs112910589 3414 dbSNP
rs565094092 3415 dbSNP
rs1195705165 3418 dbSNP
rs955668422 3422 dbSNP
rs1189818408 3424 dbSNP
rs1424839181 3428 dbSNP
rs1469092362 3437 dbSNP
rs1029830019 3440 dbSNP
rs772732172 3444 dbSNP
rs145146940 3446 dbSNP
rs1241852541 3450 dbSNP
rs1214094665 3458 dbSNP
rs769197538 3469 dbSNP
rs966954230 3471 dbSNP
rs1367965295 3477 dbSNP
rs888523115 3480 dbSNP
rs1048584020 3481 dbSNP
rs1316209847 3485 dbSNP
rs1218055507 3494 dbSNP
rs1274379527 3504 dbSNP
rs573422470 3506 dbSNP
rs1234287582 3510 dbSNP
rs552076092 3513 dbSNP
rs1490598945 3516 dbSNP
rs886061591 3520 dbSNP
rs1300689571 3532 dbSNP
rs1235985426 3533 dbSNP
rs761060196 3543 dbSNP
rs1367908873 3554 dbSNP
rs1260550153 3559 dbSNP
rs1477238283 3560 dbSNP
rs1288004965 3563 dbSNP
rs894800310 3565 dbSNP
rs1033369158 3567 dbSNP
rs562379785 3577 dbSNP
rs553562375 3584 dbSNP
rs776141698 3585 dbSNP
rs939048146 3590 dbSNP
rs1298694799 3595 dbSNP
rs1397199009 3608 dbSNP
rs1426306310 3611 dbSNP
rs772669515 3626 dbSNP
rs1338678099 3635 dbSNP
rs1399578475 3636 dbSNP
rs745958941 3638 dbSNP
rs1270874229 3641 dbSNP
rs1434074904 3643 dbSNP
rs1364084442 3652 dbSNP
rs74540613 3660 dbSNP
rs1289775567 3687 dbSNP
rs1360667281 3691 dbSNP
rs1225157911 3693 dbSNP
rs1326975694 3695 dbSNP
rs779103157 3697 dbSNP
rs914989147 3710 dbSNP
rs1243362672 3713 dbSNP
rs1419087809 3719 dbSNP
rs1181281309 3722 dbSNP
rs989313530 3722 dbSNP
rs956710651 3745 dbSNP
rs1047521754 3751 dbSNP
rs529413206 3761 dbSNP
rs542237711 3765 dbSNP
rs573238284 3771 dbSNP
rs977099500 3772 dbSNP
rs1210771873 3774 dbSNP
rs1319163165 3781 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gaccCCACCCCUG-UCUCCGAa 5'
              | ||  | | ||||||| 
Target 5' agaaGCUGAAGUCAAGAGGCUg 3'
4 - 25
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000371117.3 | 3UTR | AAUAGAAGCUGAAGUCAAGAGGCUGUGGGCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
108 hsa-miR-6819-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT358318 PANK3 pantothenate kinase 3 2 2
MIRT454719 UBQLNL ubiquilin like 2 2
MIRT471362 PEG10 paternally expressed 10 2 2
MIRT478101 DLG5 discs large MAGUK scaffold protein 5 2 4
MIRT495554 GOLGA6L4 golgin A6 family-like 4 2 2
MIRT495587 GOLGA6L10 golgin A6 family-like 10 2 2
MIRT508315 RPL18 ribosomal protein L18 2 4
MIRT529183 ADAM33 ADAM metallopeptidase domain 33 2 2
MIRT532035 FHDC1 FH2 domain containing 1 2 2
MIRT545131 ANXA5 annexin A5 2 2
MIRT567288 HNRNPL heterogeneous nuclear ribonucleoprotein L 2 2
MIRT568094 CEBPG CCAAT/enhancer binding protein gamma 2 2
MIRT573291 DLX4 distal-less homeobox 4 2 2
MIRT575169 Fam120c family with sequence similarity 120, member C 2 2
MIRT609495 DNASE1L3 deoxyribonuclease 1 like 3 2 2
MIRT611264 EHD3 EH domain containing 3 2 2
MIRT613580 POC5 POC5 centriolar protein 2 2
MIRT616520 C9orf170 chromosome 9 open reading frame 170 2 2
MIRT617098 ZNF667 zinc finger protein 667 2 2
MIRT618268 DDX51 DEAD-box helicase 51 2 2
MIRT618294 ZNF682 zinc finger protein 682 2 2
MIRT618617 SHOX short stature homeobox 2 2
MIRT619741 SRFBP1 serum response factor binding protein 1 2 2
MIRT619784 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT621119 SP110 SP110 nuclear body protein 2 2
MIRT622530 RAD51 RAD51 recombinase 2 2
MIRT623088 NME6 NME/NM23 nucleoside diphosphate kinase 6 2 2
MIRT623938 FKBP14 FK506 binding protein 14 2 2
MIRT624389 CD84 CD84 molecule 2 2
MIRT624860 ABI2 abl interactor 2 2 2
MIRT628752 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT632243 VTA1 vesicle trafficking 1 2 2
MIRT632987 E2F2 E2F transcription factor 2 2 2
MIRT633695 RBM43 RNA binding motif protein 43 2 2
MIRT633766 CENPBD1 CENPB DNA-binding domain containing 1 2 2
MIRT633808 ZNF91 zinc finger protein 91 2 2
MIRT638914 CBLN2 cerebellin 2 precursor 2 2
MIRT641298 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT642123 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT642179 HEBP2 heme binding protein 2 2 2
MIRT642617 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT643325 TMEM151B transmembrane protein 151B 2 2
MIRT644534 TMEM134 transmembrane protein 134 2 2
MIRT645820 OMA1 OMA1 zinc metallopeptidase 2 2
MIRT646093 MGST3 microsomal glutathione S-transferase 3 2 2
MIRT646861 SLC35E4 solute carrier family 35 member E4 2 2
MIRT647466 DZIP1L DAZ interacting zinc finger protein 1 like 2 2
MIRT647702 NADSYN1 NAD synthetase 1 2 2
MIRT648082 ZMIZ2 zinc finger MIZ-type containing 2 2 2
MIRT648547 TMEM169 transmembrane protein 169 2 2
MIRT648690 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT649747 GNB5 G protein subunit beta 5 2 2
MIRT650154 ZNF426 zinc finger protein 426 2 2
MIRT650450 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT650943 CTNS cystinosin, lysosomal cystine transporter 2 2
MIRT651544 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT652304 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT652890 SYVN1 synoviolin 1 2 2
MIRT654222 RNF19B ring finger protein 19B 2 2
MIRT654676 PSMB5 proteasome subunit beta 5 2 2
MIRT658249 FAXC failed axon connections homolog 2 2
MIRT658363 FAM65B RHO family interacting cell polarization regulator 2 2 2
MIRT659622 CELF1 CUGBP Elav-like family member 1 2 2
MIRT660171 BNIP3L BCL2 interacting protein 3 like 2 2
MIRT660634 ANKRD52 ankyrin repeat domain 52 2 2
MIRT662428 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT662984 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT663939 ZNF554 zinc finger protein 554 2 2
MIRT666960 PKHD1 PKHD1, fibrocystin/polyductin 2 2
MIRT667945 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 2
MIRT668847 CYCS cytochrome c, somatic 2 2
MIRT671792 RGS17 regulator of G protein signaling 17 2 2
MIRT672382 RPL37 ribosomal protein L37 2 2
MIRT673516 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 4
MIRT674716 FAM73A mitoguardin 1 2 2
MIRT676352 KLF8 Kruppel like factor 8 2 2
MIRT677820 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT678440 PDE4C phosphodiesterase 4C 2 2
MIRT678499 ARHGEF39 Rho guanine nucleotide exchange factor 39 2 2
MIRT679243 LRP10 LDL receptor related protein 10 2 2
MIRT693607 SLC39A1 solute carrier family 39 member 1 2 2
MIRT695927 ZNF174 zinc finger protein 174 2 2
MIRT697987 TSPAN6 tetraspanin 6 2 2
MIRT700821 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT701350 NR4A3 nuclear receptor subfamily 4 group A member 3 2 2
MIRT702348 KLHL7 kelch like family member 7 2 2
MIRT703387 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT703883 ERBB2IP erbb2 interacting protein 2 2
MIRT708237 PPP1R26 protein phosphatase 1 regulatory subunit 26 2 2
MIRT708629 NUDT18 nudix hydrolase 18 2 2
MIRT708990 CABP4 calcium binding protein 4 2 2
MIRT709804 FOXE1 forkhead box E1 2 2
MIRT710203 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT710248 VAMP1 vesicle associated membrane protein 1 2 2
MIRT710281 FGF1 fibroblast growth factor 1 2 2
MIRT712992 IRGQ immunity related GTPase Q 2 2
MIRT713887 MOB3A MOB kinase activator 3A 2 2
MIRT715600 ADAM17 ADAM metallopeptidase domain 17 2 2
MIRT715639 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT715686 FRK fyn related Src family tyrosine kinase 2 2
MIRT717053 WIZ widely interspaced zinc finger motifs 2 2
MIRT717611 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT721539 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT722096 SUSD1 sushi domain containing 1 2 2
MIRT722435 HRNR hornerin 2 2
MIRT722855 NEGR1 neuronal growth regulator 1 2 2
MIRT724621 SNAP25 synaptosome associated protein 25 2 2
MIRT724777 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6819 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6819-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6819-3p Cisplatin 5460033 NSC119875 approved resistant High Hypopharyngeal Cancer cell line (FaDu)
hsa-miR-6819-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-6819-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-6819-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6819-3p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-6819-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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