pre-miRNA Information
pre-miRNA hsa-mir-500b   
Genomic Coordinates chrX: 50010672 - 50010750
Description Homo sapiens miR-500b stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-500b-3p
Sequence 51| GCACCCAGGCAAGGAUUCUG |70
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs782140253 8 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol FADS6   
Synonyms FP18279
Description fatty acid desaturase 6
Transcript NM_178128   
Expression
Putative miRNA Targets on FADS6
3'UTR of FADS6
(miRNA target sites are highlighted)
>FADS6|NM_178128|3'UTR
   1 TGAGGCCGGGCCGGTGCAGCCACCCTGCCCCTCCCTGGCCTGGCCCTGGCCCTCCTGCTGCTGCTGGTCCAGGGGGTGTG
  81 GCTCAGTGGCTGGTGGTGGACCTGGAGAGTGGAGGCACCGGCCAGGCAGGGGGGCAGGGGAGCTCAGGCCTGGGGTCTGG
 161 GGGCCACCTGCCTTGCGTGCTTTTCTGGGTTTTGAGGGGTGTCTGGGTGAAGCGGTAATGGTGGCTGTGCATTCTGGTCA
 241 GTCTGGACCTCAGCAACTTCATCTCAGGACTAAAGAGCTGGGTCCTTCCCCCTGCTCCATCTGAGCCTTGGTAGGGTTAA
 321 AGGGAGGTGACAGGGTGAAGAGGGATCCTGTGCAGGGGCCACCTGGGAGATAGCAGGGGGCACAGAGAGAACAGGGTCAG
 401 CTCCCTCGGCTGGGACCTCCCTGGCATTGGGAGAGCCCCACACGGCCTTGGCTATTGCTTCCTTCAGGCTCTGCCCACCA
 481 AGGTGCCCTCTCCCCGGGGACCTTAGGGTGAGCTTGCTTTTGGCAGGCCTTCCTCGATCCTCAGCCAAAGGAACCTGTGC
 561 AAGACACTGGCTCAGCAGTTCCCCAGGCCACAGTATCAGCAAGATAAAAGTGAGTGTGTTTTGTCGGGAGGGAACTCCAG
 641 GGGAAGTGAGGGGAGAAGGTTCCCCAGGGACAGAGTTAGGGAAAGAGTATAAATAGCCAGCCAGGGGCGGTGGCTCATGC
 721 CTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGGTGGATCGCGAGATCAGGAGCTCGAGACCACCCTGGCCAACATGGTG
 801 AAACCCCGTCTCTACTAAAAATACAAAAAATTAGCTGGATGTGGTGGCATACACTTGTAGTCCCAGCTACTTGGCAGGCT
 881 GAGGCAGAAGAATCACCTGAACCCGGGAGGTGGAGGTTGCAGTGAGCCAAGATTGCACCATTGCATTCCAGCCTGGGTGA
 961 CAGAGCGAGACTCCATCTCAAAAAAATAAAAAAATAAAAAATAAGACTCCCGTTCAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' guCUUAGGAACGGACCCACg 5'
            | ||:|  ||||||||| 
Target 5' ttGCATTCCAGCCTGGGTGa 3'
941 - 960 162.00 -20.50
2
miRNA  3' guCUUAGGA------ACGGACCCACg 5'
            |::|::|      ||:||||||| 
Target 5' ctGGGTTTTGAGGGGTGTCTGGGTGa 3'
185 - 210 152.00 -20.00
3
miRNA  3' guCUUAGGA-AC---------GGACCCACg 5'
            |:||||| ||         |||||| | 
Target 5' agGGATCCTGTGCAGGGGCCACCTGGGAGa 3'
341 - 370 122.00 -24.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30148383 6 COSMIC
COSN30463884 34 COSMIC
COSN6549300 90 COSMIC
COSN18838189 344 COSMIC
COSN22504332 437 COSMIC
COSN17459240 755 COSMIC
COSN18972975 1008 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs537752819 7 dbSNP
rs746376376 8 dbSNP
rs1413705179 9 dbSNP
rs930222762 10 dbSNP
rs368141734 12 dbSNP
rs568829745 13 dbSNP
rs1435321624 18 dbSNP
rs1156637490 19 dbSNP
rs754032714 22 dbSNP
rs749922279 26 dbSNP
rs764352016 28 dbSNP
rs1242923806 33 dbSNP
rs1187195013 34 dbSNP
rs756354156 43 dbSNP
rs752735922 50 dbSNP
rs940962971 69 dbSNP
rs942818587 73 dbSNP
rs1274858561 75 dbSNP
rs1369305567 76 dbSNP
rs908104232 81 dbSNP
rs1285793253 86 dbSNP
rs769277234 87 dbSNP
rs954835202 89 dbSNP
rs1288343518 90 dbSNP
rs979064430 94 dbSNP
rs1188280358 98 dbSNP
rs548793678 108 dbSNP
rs1199687825 111 dbSNP
rs564236952 119 dbSNP
rs528941198 120 dbSNP
rs1178222419 129 dbSNP
rs969149551 130 dbSNP
rs1440058626 132 dbSNP
rs1160299540 133 dbSNP
rs1010212230 135 dbSNP
rs1021648557 135 dbSNP
rs956617492 135 dbSNP
rs1251362015 140 dbSNP
rs1032936436 142 dbSNP
rs560265764 143 dbSNP
rs1308050059 158 dbSNP
rs1378191455 162 dbSNP
rs1030885241 167 dbSNP
rs1242771360 169 dbSNP
rs1282726608 170 dbSNP
rs977368728 172 dbSNP
rs111985732 174 dbSNP
rs1273498199 176 dbSNP
rs149920976 177 dbSNP
rs1011979762 189 dbSNP
rs1459208409 194 dbSNP
rs898887410 196 dbSNP
rs1366454049 199 dbSNP
rs1472446626 200 dbSNP
rs1163740338 201 dbSNP
rs1037340247 205 dbSNP
rs690124 208 dbSNP
rs1400589770 209 dbSNP
rs565361888 214 dbSNP
rs1013914182 223 dbSNP
rs940325648 226 dbSNP
rs908135502 227 dbSNP
rs545638564 235 dbSNP
rs1286453024 246 dbSNP
rs1316210995 247 dbSNP
rs1034489005 248 dbSNP
rs1218100753 249 dbSNP
rs1258731784 256 dbSNP
rs745984433 266 dbSNP
rs1459280497 293 dbSNP
rs1198909039 294 dbSNP
rs531894594 296 dbSNP
rs1298785454 299 dbSNP
rs1441608475 306 dbSNP
rs1188235265 311 dbSNP
rs1259526085 314 dbSNP
rs562885826 329 dbSNP
rs1169365941 345 dbSNP
rs933521913 347 dbSNP
rs1170419058 349 dbSNP
rs1402010473 350 dbSNP
rs192532668 351 dbSNP
rs1315094689 356 dbSNP
rs922107253 358 dbSNP
rs888649341 359 dbSNP
rs1278956107 368 dbSNP
rs1397265532 378 dbSNP
rs1172218467 385 dbSNP
rs968844797 387 dbSNP
rs1255616570 388 dbSNP
rs914607709 389 dbSNP
rs690115 391 dbSNP
rs1192813225 392 dbSNP
rs988816253 392 dbSNP
rs930253741 395 dbSNP
rs1251910446 398 dbSNP
rs187915900 405 dbSNP
rs1041038657 407 dbSNP
rs757540632 408 dbSNP
rs540393012 410 dbSNP
rs911313397 425 dbSNP
rs1358984560 426 dbSNP
rs1419670280 426 dbSNP
rs1299322826 442 dbSNP
rs970989313 443 dbSNP
rs1385153723 444 dbSNP
rs1211157431 445 dbSNP
rs1023484413 450 dbSNP
rs1486479319 451 dbSNP
rs1236720393 457 dbSNP
rs1054246900 469 dbSNP
rs936762061 479 dbSNP
rs1232306716 488 dbSNP
rs925818393 495 dbSNP
rs370578781 496 dbSNP
rs1486767364 498 dbSNP
rs73997537 504 dbSNP
rs1266001382 507 dbSNP
rs185530190 508 dbSNP
rs1195084673 514 dbSNP
rs1307571137 523 dbSNP
rs1415605282 524 dbSNP
rs1159854681 527 dbSNP
rs1377543793 531 dbSNP
rs538083391 534 dbSNP
rs992510302 535 dbSNP
rs1004543294 536 dbSNP
rs572601348 540 dbSNP
rs958573861 542 dbSNP
rs1293047134 545 dbSNP
rs1034014151 556 dbSNP
rs1443444220 564 dbSNP
rs1005755436 566 dbSNP
rs1051991105 569 dbSNP
rs753617570 570 dbSNP
rs1239161044 573 dbSNP
rs933607085 575 dbSNP
rs772877821 576 dbSNP
rs1242471917 588 dbSNP
rs73997534 590 dbSNP
rs1161924324 592 dbSNP
rs1417928183 594 dbSNP
rs1410574043 602 dbSNP
rs1235974961 603 dbSNP
rs1381567644 604 dbSNP
rs1456992054 612 dbSNP
rs1188102307 614 dbSNP
rs1039213057 625 dbSNP
rs748612615 626 dbSNP
rs994268422 632 dbSNP
rs555726055 642 dbSNP
rs193179957 643 dbSNP
rs988888287 653 dbSNP
rs1329317014 654 dbSNP
rs200120760 659 dbSNP
rs1006899743 660 dbSNP
rs1213553240 662 dbSNP
rs1298568804 662 dbSNP
rs188305676 664 dbSNP
rs1287774078 675 dbSNP
rs1226587404 676 dbSNP
rs1311908876 676 dbSNP
rs73997533 678 dbSNP
rs981415410 690 dbSNP
rs970681221 695 dbSNP
rs1023938960 696 dbSNP
rs936774028 698 dbSNP
rs1204738126 703 dbSNP
rs1310860779 705 dbSNP
rs1395739264 707 dbSNP
rs1181854671 708 dbSNP
rs1257483179 718 dbSNP
rs990670127 732 dbSNP
rs1168647497 739 dbSNP
rs924007947 746 dbSNP
rs1041584811 751 dbSNP
rs945838108 752 dbSNP
rs917172171 754 dbSNP
rs992707630 755 dbSNP
rs1441542426 756 dbSNP
rs780766580 760 dbSNP
rs963540904 761 dbSNP
rs1015997688 762 dbSNP
rs1416494041 763 dbSNP
rs1275799227 769 dbSNP
rs1310383698 773 dbSNP
rs1214854685 776 dbSNP
rs1164963045 782 dbSNP
rs1475916897 783 dbSNP
rs1415138935 784 dbSNP
rs1004571230 785 dbSNP
rs1310004639 788 dbSNP
rs1428818036 793 dbSNP
rs140289164 795 dbSNP
rs1184602297 796 dbSNP
rs1192092301 799 dbSNP
rs1475777535 804 dbSNP
rs1464355947 806 dbSNP
rs983793419 807 dbSNP
rs530341942 808 dbSNP
rs1423331289 811 dbSNP
rs952584372 812 dbSNP
rs375917320 825 dbSNP
rs997559349 838 dbSNP
rs900758335 848 dbSNP
rs1025325793 849 dbSNP
rs994299439 850 dbSNP
rs1337042932 852 dbSNP
rs1436556962 853 dbSNP
rs1263824154 854 dbSNP
rs1359416982 858 dbSNP
rs1430823932 865 dbSNP
rs112441251 875 dbSNP
rs1019733798 904 dbSNP
rs1218234291 905 dbSNP
rs1298151167 912 dbSNP
rs1365358467 922 dbSNP
rs1433393940 933 dbSNP
rs1304683013 934 dbSNP
rs947616134 941 dbSNP
rs893294535 942 dbSNP
rs531834246 946 dbSNP
rs1053215569 951 dbSNP
rs1448015141 952 dbSNP
rs934748064 963 dbSNP
rs151208844 966 dbSNP
rs890025032 967 dbSNP
rs1194479395 971 dbSNP
rs1387946074 972 dbSNP
rs1395517862 972 dbSNP
rs1162191228 973 dbSNP
rs981473392 975 dbSNP
rs1359834061 978 dbSNP
rs1462159791 979 dbSNP
rs1005546986 987 dbSNP
rs796089390 987 dbSNP
rs1435377035 990 dbSNP
rs905887544 995 dbSNP
rs372508161 1002 dbSNP
rs950127035 1008 dbSNP
rs1448657542 1011 dbSNP
rs1253471741 1012 dbSNP
rs76510692 1015 dbSNP
rs1238442118 1016 dbSNP
rs867533919 1016 dbSNP
rs948690093 1016 dbSNP
rs867090785 1027 dbSNP
rs113393456 1030 dbSNP
rs1225937643 1030 dbSNP
rs1255125981 1030 dbSNP
rs201931533 1030 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084045. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep3 HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gucUUAGGAACGGACCCACg 5'
             | |||  ||||||||| 
Target 5' ugcACUCC-AGCCUGGGUGa 3'
13 - 31
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084045
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep3
Location of target site ENST00000310226.6 | 3UTR | UGAGCACCACUGCACUCCAGCCUGGGUGACAGAGCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000310226.6 | 3UTR | AGUGAGCACCACUGCACUCCAGCCUGGGUGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
172 hsa-miR-500b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059905 HDGF heparin binding growth factor 2 4
MIRT235394 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 4
MIRT442246 PYGO1 pygopus family PHD finger 1 2 2
MIRT443591 ZNF439 zinc finger protein 439 2 4
MIRT453280 EFTUD2 elongation factor Tu GTP binding domain containing 2 2 2
MIRT463540 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT465589 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT469462 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT485449 KCTD15 potassium channel tetramerization domain containing 15 2 4
MIRT486682 WDR81 WD repeat domain 81 2 2
MIRT489078 POLM DNA polymerase mu 2 2
MIRT493734 GREM2 gremlin 2, DAN family BMP antagonist 2 2
MIRT494872 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT496130 RNF103-CHMP3 RNF103-CHMP3 readthrough 2 2
MIRT496489 CHMP3 charged multivesicular body protein 3 2 2
MIRT496924 CLMN calmin 2 2
MIRT497297 TMEM119 transmembrane protein 119 2 2
MIRT499103 AGRN agrin 2 2
MIRT508979 CXorf38 chromosome X open reading frame 38 2 2
MIRT509911 NIPAL1 NIPA like domain containing 1 2 2
MIRT512820 ARRDC2 arrestin domain containing 2 2 4
MIRT512827 KBTBD6 kelch repeat and BTB domain containing 6 2 4
MIRT515360 MRPL52 mitochondrial ribosomal protein L52 2 2
MIRT516610 TRIM58 tripartite motif containing 58 2 2
MIRT517053 TLDC1 TBC/LysM-associated domain containing 1 2 2
MIRT517637 ZNF491 zinc finger protein 491 2 2
MIRT518270 LEAP2 liver enriched antimicrobial peptide 2 2 2
MIRT518625 STAR steroidogenic acute regulatory protein 2 2
MIRT518887 N4BP2L2 NEDD4 binding protein 2 like 2 2 2
MIRT519026 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT520365 UBE2G2 ubiquitin conjugating enzyme E2 G2 2 2
MIRT521106 SLC1A5 solute carrier family 1 member 5 2 2
MIRT521943 PHC3 polyhomeotic homolog 3 2 2
MIRT522253 NPEPPS aminopeptidase puromycin sensitive 2 2
MIRT522853 KIAA1551 KIAA1551 2 2
MIRT522868 KIAA1549 KIAA1549 2 2
MIRT524207 DDX19B DEAD-box helicase 19B 2 2
MIRT526004 ARHGAP27 Rho GTPase activating protein 27 2 2
MIRT527769 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT527827 TMEM74B transmembrane protein 74B 2 2
MIRT527861 SMOC1 SPARC related modular calcium binding 1 2 2
MIRT528040 WT1 Wilms tumor 1 2 2
MIRT529802 ZDHHC8 zinc finger DHHC-type containing 8 2 2
MIRT531723 TARS threonyl-tRNA synthetase 2 2
MIRT531996 BARD1 BRCA1 associated RING domain 1 2 2
MIRT533338 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT533621 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT533652 TMOD2 tropomodulin 2 2 2
MIRT534397 SENP3 SUMO1/sentrin/SMT3 specific peptidase 3 2 2
MIRT538686 CCDC80 coiled-coil domain containing 80 2 2
MIRT540444 RBM43 RNA binding motif protein 43 2 2
MIRT542586 ZC3H12C zinc finger CCCH-type containing 12C 2 8
MIRT542796 PLEKHA3 pleckstrin homology domain containing A3 2 4
MIRT542991 ERC1 ELKS/RAB6-interacting/CAST family member 1 2 2
MIRT544424 ZNF460 zinc finger protein 460 2 4
MIRT545740 ESF1 ESF1 nucleolar pre-rRNA processing protein homolog 2 4
MIRT552618 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT554456 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT569663 PRIM1 DNA primase subunit 1 2 2
MIRT569924 PCSK9 proprotein convertase subtilisin/kexin type 9 2 2
MIRT570140 IL1RL2 interleukin 1 receptor like 2 2 2
MIRT573558 TMEM120B transmembrane protein 120B 2 2
MIRT574282 OPRD1 opioid receptor delta 1 2 2
MIRT575335 Fbxo6 F-box protein 6 2 2
MIRT607057 IDS iduronate 2-sulfatase 2 2
MIRT607078 POM121L7 POM121 transmembrane nucleoporin like 7 pseudogene 2 2
MIRT607500 HEBP2 heme binding protein 2 2 2
MIRT607530 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT607808 RHBDL2 rhomboid like 2 2 2
MIRT608079 ZFP14 ZFP14 zinc finger protein 2 2
MIRT609119 NUDT3 nudix hydrolase 3 2 2
MIRT609745 PTCH1 patched 1 2 2
MIRT612904 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 2 2
MIRT618720 PCSK2 proprotein convertase subtilisin/kexin type 2 2 2
MIRT618778 HLA-E major histocompatibility complex, class I, E 2 2
MIRT619015 SLC2A6 solute carrier family 2 member 6 2 2
MIRT623223 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT623819 GEMIN6 gem nuclear organelle associated protein 6 2 2
MIRT625704 OPTN optineurin 2 2
MIRT626437 CHDH choline dehydrogenase 2 2
MIRT628087 KAT7 lysine acetyltransferase 7 2 2
MIRT628936 APOB apolipoprotein B 2 2
MIRT633543 PGBD5 piggyBac transposable element derived 5 2 2
MIRT634348 SGOL1 shugoshin 1 2 2
MIRT634611 KIAA1919 major facilitator superfamily domain containing 4B 2 2
MIRT635243 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT636681 BTLA B and T lymphocyte associated 2 2
MIRT636923 ZNF845 zinc finger protein 845 2 2
MIRT637606 ZNF554 zinc finger protein 554 2 2
MIRT639242 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT640835 POLR3A RNA polymerase III subunit A 2 2
MIRT642098 FBXL2 F-box and leucine rich repeat protein 2 2 2
MIRT643087 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 1
MIRT643934 C17orf104 meiosis specific with coiled-coil domain 2 2
MIRT644353 FXN frataxin 2 2
MIRT645628 SF3A3 splicing factor 3a subunit 3 2 2
MIRT645754 FAM213A family with sequence similarity 213 member A 2 2
MIRT646329 MVB12B multivesicular body subunit 12B 2 2
MIRT646817 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT647019 ADCY2 adenylate cyclase 2 2 2
MIRT647621 IGSF9B immunoglobulin superfamily member 9B 2 2
MIRT648517 PIGG phosphatidylinositol glycan anchor biosynthesis class G 2 2
MIRT648871 ABCA6 ATP binding cassette subfamily A member 6 2 2
MIRT649620 ITPKC inositol-trisphosphate 3-kinase C 2 2
MIRT650062 CCDC134 coiled-coil domain containing 134 2 2
MIRT650734 TNFSF8 TNF superfamily member 8 2 2
MIRT652389 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT654352 RBM27 RNA binding motif protein 27 2 2
MIRT655796 NOVA2 NOVA alternative splicing regulator 2 2 2
MIRT657329 HNRNPK heterogeneous nuclear ribonucleoprotein K 2 2
MIRT657734 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT660613 ANO6 anoctamin 6 2 2
MIRT661243 ARL17B ADP ribosylation factor like GTPase 17B 2 2
MIRT662245 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662921 MED18 mediator complex subunit 18 2 2
MIRT662963 JPH2 junctophilin 2 2 2
MIRT663347 ZNF74 zinc finger protein 74 2 2
MIRT663528 MASTL microtubule associated serine/threonine kinase like 2 2
MIRT663547 CCR6 C-C motif chemokine receptor 6 2 2
MIRT663977 ZNF786 zinc finger protein 786 2 2
MIRT664084 METTL2B methyltransferase like 2B 2 2
MIRT664358 C16orf45 chromosome 16 open reading frame 45 2 2
MIRT664421 TIGD6 tigger transposable element derived 6 2 2
MIRT664476 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT664979 TDRD1 tudor domain containing 1 2 2
MIRT665128 PYCRL pyrroline-5-carboxylate reductase 3 2 2
MIRT666259 SLC31A1 solute carrier family 31 member 1 2 2
MIRT666321 SLC16A10 solute carrier family 16 member 10 2 2
MIRT666881 POLQ DNA polymerase theta 2 2
MIRT668469 FADS6 fatty acid desaturase 6 2 2
MIRT669554 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT669835 ISCA2 iron-sulfur cluster assembly 2 2 2
MIRT670185 CCDC142 coiled-coil domain containing 142 2 2
MIRT672020 PXMP4 peroxisomal membrane protein 4 2 2
MIRT672070 KIAA0930 KIAA0930 2 2
MIRT672475 RTTN rotatin 2 2
MIRT672851 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT673090 AK1 adenylate kinase 1 2 2
MIRT673581 KDELC2 KDEL motif containing 2 2 2
MIRT674586 SLC35B4 solute carrier family 35 member B4 2 2
MIRT675001 STRN3 striatin 3 2 2
MIRT679018 MTMR10 myotubularin related protein 10 2 2
MIRT679680 STAT3 signal transducer and activator of transcription 3 2 2
MIRT682833 FLG2 filaggrin family member 2 2 2
MIRT682886 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT683442 AP3B2 adaptor related protein complex 3 beta 2 subunit 2 2
MIRT687040 RNF115 ring finger protein 115 2 2
MIRT691957 RHOH ras homolog family member H 2 2
MIRT694625 ZFPM1 zinc finger protein, FOG family member 1 2 2
MIRT695637 SLC26A2 solute carrier family 26 member 2 2 2
MIRT697640 WRN Werner syndrome RecQ like helicase 2 2
MIRT702009 MIDN midnolin 2 2
MIRT702034 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
MIRT704789 CDK6 cyclin dependent kinase 6 2 2
MIRT705728 AMMECR1L AMMECR1 like 2 2
MIRT705879 ADM adrenomedullin 2 2
MIRT706220 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT708418 CERS4 ceramide synthase 4 2 2
MIRT709114 C3orf18 chromosome 3 open reading frame 18 2 2
MIRT709595 ITPA inosine triphosphatase 2 2
MIRT710945 MRPL45 mitochondrial ribosomal protein L45 2 2
MIRT712345 NLN neurolysin 2 2
MIRT712530 CYTH2 cytohesin 2 2 2
MIRT714019 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT717287 ARMC12 armadillo repeat containing 12 2 2
MIRT717733 FGF1 fibroblast growth factor 1 2 2
MIRT718083 CLIC5 chloride intracellular channel 5 2 2
MIRT718562 MUC20 mucin 20, cell surface associated 2 2
MIRT721639 MYLK3 myosin light chain kinase 3 2 2
MIRT722632 C8A complement C8 alpha chain 2 2
MIRT723177 CDCA4 cell division cycle associated 4 2 2
MIRT725523 FAM229B family with sequence similarity 229 member B 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-500b Methotrexate 126941 NSC740 approved resistant cell line (W1)
hsa-miR-500b-3p Gemcitabine 60750 NSC613327 approved resistant High Pancreatic Cancer cell line (AsPC-1)
hsa-miR-500b-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-500b-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-500b-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-500b-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-500b-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)

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