pre-miRNA Information
pre-miRNA hsa-mir-2115   
Genomic Coordinates chr3: 48316360 - 48316459
Description Homo sapiens miR-2115 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-2115-5p
Sequence 21| AGCUUCCAUGACUCCUGAUGGA |42
Evidence Experimental
Experiments 454
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs372327506 9 dbSNP
rs1259362191 10 dbSNP
rs1215292065 12 dbSNP
rs1197671843 16 dbSNP
rs1468768022 20 dbSNP
rs1273755407 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ESRRG   
Synonyms ERR3, ERRgamma, NR3B3
Description estrogen related receptor gamma
Transcript NM_001134285   
Other Transcripts NM_001438 , NM_206594 , NM_206595   
Expression
Putative miRNA Targets on ESRRG
3'UTR of ESRRG
(miRNA target sites are highlighted)
>ESRRG|NM_001134285|3'UTR
   1 CTAAAAGCTCCCTGGGCCTTCCCATCCTTCATGTTGAAAAAGGGAAAATAAACCCAAGAGTGATGTCGAAGAAACTTAGA
  81 GTTTAGTTAACAACATCAAAAATCAACAGACTGCACTGATAATTTAGCAGCAAGACTATGAAGCAGCTTTCAGATTCCTC
 161 CATAGGTTCCTGATGAGTTTCTTTCTACTTTCTCCATCATCTTCTTTCCTCTTTCTTCCCACATTTCTCTTTCTCTTTAT
 241 TTTTTCTCCTTTTCTTCTTTCACCTCCCTTATTTCTTTGCTTCTTTCATTCCTAGTTCCCATTCTCCTTTATTTTCTTCC
 321 CGTCTGCCTGCCTTCTTTCTTTTCTTTACCTACTCTCATTCCTCTCTTTTCTCATCCTTCCCCTTTTTTCTAAATTTGAA
 401 ATAGCTTTAGTTTAAAAAAAAATCCTCCCTTCCCCCTTTCCTTTCCCTTTCTTTCCTTTTTCCCTTTCCTTTTCCCTTTC
 481 CTTTCCTTTCCTCTTGACCTTCTTTCCATCTTTCTTTTTCTTCCTTCTGCTGCTGAACTTTTAAAAGAGGTCTCTAACTG
 561 AAGAGAGATGGAAGCCAGCCCTGCCAAAGGATGGAGATCCATAATATGGATGCCAGTGAACTTATTGTGAACCATACTGT
 641 CCCCAATGACTAAGGAATCAAAGAGAGAGAACCAACGTTCCTAAAAGTACAGTGCAACATATACAAATTGACTGAGTGCA
 721 GTATTAGATTTCATGGGAGCAGCCTCTAATTAGACAACTTAAGCAACGTTGCATCGGCTGCTTCTTATCATTGCTTTTCC
 801 ATCTAGATCAGTTACAGCCATTTGATTCCTTAATTGTTTTTTCAAGTCTTCCAGGTATTTGTTAGTTTAGCTACTATGTA
 881 ACTTTTTCAGGGAATAGTTTAAGCTTTATTCATTCATGCAATACTAAAGAGAAATAAGAATACTGCAATTTTGTGCTGGC
 961 TTTGAACAATTACGAACAATAATGAAGGACAAATGAATCCTGAAGGAAGATTTTTAAAAATGTTTTGTTTCTTCTTACAA
1041 ATGGAGATTTTTTTGTACCAGCTTTACCACTTTTCAGCCATTTATTAATATGGGAATTTAACTTACTCAAGCAATAGTTG
1121 AAGGGAAGGTGCATATTATCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACATCAATTTCTTAACATGAGC
1201 TCCAGTTTACCTAAATGTTCACTGACACAAAGGATGAGATTACACCTACAGTGACTCTGAGTAGTCACATATATAAGCAC
1281 TGCACATGAGATATAGATCCGTAGAATTGTCAGGAGTGCACCTCTCTACTTGGGAGGTACAATTGCCATATGATTTCTAG
1361 CTGCCATGGTGGTTAGGAATGTGATACTGCCTGTTTGCAAAGTCACAGACCTTGCCTCAGAAGGAGCTGTGAGCCAGTAT
1441 TCATTTAAGAGGCAATAAGGCAAATGCCAGAATTAAAAAAAAAAATCATCAAAGACAGAAAATGCCTGACCAAATTCTAA
1521 AACCTAATCCATATAAGTTTATTCATTTAGGAATGTTCGTTTAAATTAATCTGCAGTTTTTACCAAGAGCTAAGCCAATA
1601 TATGTGCTTTTCAACCAGTATTGTCACAGCATGAAAGTCAAGTCAGGTTCCAGACTGTTAAGAGGTGTAATCTAATGAAG
1681 AAATCAATTAGATGCCCCGAAATCTACAGTCGCTGAATAACCAATAAACAGTAACCTCCATCAAATGCTATACCAATGGA
1761 CCAGTGTTAGTAGCTGCTCCCTGTATTATGTGAACAGTCTTATTCTATGTACACAGATGTAATTAAAATTGTAATCCTAA
1841 CAAACAAAAGAAATGTAGTTCAGCTTTTCAATGTTTCATGTTTGCTGTGCTTTTCTGAATTTTATGTTGCATTCAAAGAC
1921 TGTTGTCTTGTTCTTGTGGTGTTTGGATTCTTGTGGTGTGTGCTTTTAGACACAGGGTAGAATTAGAGACAATATTGGAT
2001 GTACAATTCCTCAGGAGACTACAGTAGTATATTCTATTCCTTACCAGTAATAAGGTTCTTCCTAATAATAATTAAGAGAT
2081 TGAAACTCCAAACAAGTATTCATTATGAACAGATACACATCAAAATCATAATAATATTTTCAAAACAAGGAATAATTTCT
2161 CTAATGGTTTATTATAGAATACCAATGTATAGCTTAGAAATAAAACTTTGAATATTTCAAGAATATAGATAAGTCTAATT
2241 TTTAAATGCTGTATATATGGCTTTCACTCAATCATCTCTCAGATGTTGTTATTAACTCGCTCTGTGTTGTTGCAAAACTT
2321 TTTGGTGCAGATTCGTTTCCAAAACTATTGCTACTTTGTGTGCTTTAAACAAAATACCTTGGGTTGATGAAACATCAACC
2401 CAGTGCTAGGAATACTGTGTATCTATCATTAGCTATATGGGACTATATTGTAGATTGTGGTTTCTCAGTAGAGAAGTGAC
2481 TGTAGTGTGATTCTAGATAAATCATCATTAGCAATTCATTCAGATGGTCAATAACTTGAAATTTATAGCTGTGATAGGAG
2561 TTCAGAAATTGGCACATCCCTTTAAAAATAACAACAGAAAATACAACTCCTGGGAAAAAAGGTGCTGATTCTATAAGATT
2641 ATTTATATATGTAAGTGTTTAAAAAGATTATTTTCCAGAAAGTTTGTGCAGGGTTTAAGTTGCTACTATTCAACTACACT
2721 ATATATAAATAAAATATATACAATATATACATTGTTTTCACTGTATCACATTAAAGTACTTGGGCTTCAGAAGTAAGAGC
2801 CAACCAACTGAAAACCTGAGATGGAGATATGTTCAAAGAATGAGATACAATTTTTTAGTTTTCAGTTTAAGTAACTCTCA
2881 GCATTACAAAAGAGTAAGTATCTCACAAATAGGAAATAAAACTAAAACGTGGATTTAAAAAGAACTGCACGGGCTTTAGG
2961 GTAAATGCTCATCTTAAACCTCACTAGAGGGAAGTCTTCTCAAGTTTCAAGCAAGACCATTTACTTAATGTGAAGTTTTG
3041 GAAAGTTATAAAGGTGTATGTTTTAGCCATATGATTTTAATTTTAATTTTGCTTCTTTTAGGTTCGTTCTTATTTAAAGC
3121 AATATGATTGTGTGACTCCTTGTAGTTACACTTGTGTTTCAATCAGATCAGATTGTTGTATTTATTCCACTATTTTGCAT
3201 TTAAATGATAACATAAAAGATATAAAAAATTTAAAACTGCTATTTTTCTTATAGAAGAGAAAATGGGTGTTGGTGATTGT
3281 ATTTTAATTATTTAAGCGTCTCTGTTTACCTGCCTAGGAAAACATTTTATGGCAGTCTTATGTGCAAAGATCGTAAAAGG
3361 ACAAAAAATTTAAACTGCTTATAATAATCCAGGAGTTGCATTATAGCCAGTAGTAAAAATAATAATAATAATAATAAAAC
3441 CATGTCTATAGCTGTAGATGGGCTTCACATCTGTAAAGCAATCAATTGTATATTTTTGTGATGTGTACCATACTGTGTGC
3521 TCCAGCAAATGTCCATTTGTGTAAATGTATTTATTTTATATTGTATATATTGTTAAATGCAAAAAGGAGATATGATTCTG
3601 TAACTCCAATCAGTTCAGATGTGTAACTCAAATTATTATGCCTTTCAGGATGATGGTAGAGCAATATTAAACAAGCTTCC
3681 ACTTTTGACTGCTAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agguAGUCCUCAGUACCUUCGa 5'
              | | |||  |||||||| 
Target 5' taacTGAAGAGAGATGGAAGCc 3'
555 - 576 158.00 -14.30
2
miRNA  3' agGUAGUCCUCAGUACCUUCGa 5'
            :||:||   ||||||:||| 
Target 5' agTATTAGATTTCATGGGAGCa 3'
720 - 741 152.00 -18.30
3
miRNA  3' agGUAGUCCUCA-GU----------ACCUUCga 5'
            ::|||||||| ||          |||:||  
Target 5' atTGTCAGGAGTGCACCTCTCTACTTGGGAGgt 3'
1306 - 1338 122.00 -20.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31497060 11 COSMIC
COSN30476896 12 COSMIC
COSN30471597 22 COSMIC
COSN30178537 23 COSMIC
COSN26975420 26 COSMIC
COSN30480658 26 COSMIC
COSN30475765 27 COSMIC
COSN31533908 33 COSMIC
COSN508119 34 COSMIC
COSN30159979 36 COSMIC
COSN30471244 42 COSMIC
COSN30471533 43 COSMIC
COSN19734798 44 COSMIC
COSN31498629 57 COSMIC
COSN30472564 58 COSMIC
COSN31551306 61 COSMIC
COSN13516807 62 COSMIC
COSN31586933 67 COSMIC
COSN30163559 79 COSMIC
COSN30525253 92 COSMIC
COSN30515347 98 COSMIC
COSN28762422 109 COSMIC
COSN30578601 112 COSMIC
COSN32062075 383 COSMIC
COSN30647146 384 COSMIC
COSN31959498 390 COSMIC
COSN1097810 410 COSMIC
COSN20096008 413 COSMIC
COSN20058913 414 COSMIC
COSN30175486 553 COSMIC
COSN31481732 570 COSMIC
COSN5737545 574 COSMIC
COSN24722093 589 COSMIC
COSN26670921 772 COSMIC
COSN5737544 777 COSMIC
COSN31572535 781 COSMIC
COSN31529310 911 COSMIC
COSN26566303 999 COSMIC
COSN31535475 1047 COSMIC
COSN30539041 1144 COSMIC
COSN30174974 1183 COSMIC
COSN8637491 1216 COSMIC
COSN30158138 1299 COSMIC
COSN27385368 1475 COSMIC
COSN31485914 1558 COSMIC
COSN31532037 1574 COSMIC
COSN31551176 1622 COSMIC
COSN20090459 1629 COSMIC
COSN31540964 1637 COSMIC
COSN16754354 1668 COSMIC
COSN24145005 1715 COSMIC
COSN26548536 1748 COSMIC
COSN31540286 1754 COSMIC
COSN16996281 1777 COSMIC
COSN26574532 1799 COSMIC
COSN23709185 1836 COSMIC
COSN25470417 1894 COSMIC
COSN31519670 1918 COSMIC
COSN20743459 1946 COSMIC
COSN6022761 1969 COSMIC
COSN31570352 2010 COSMIC
COSN31528505 2034 COSMIC
COSN31569889 2159 COSMIC
COSN31515997 2209 COSMIC
COSN7203050 2212 COSMIC
COSN31571786 2314 COSMIC
COSN30160431 2369 COSMIC
COSN4747891 2375 COSMIC
COSN31571305 2384 COSMIC
COSN26584722 2454 COSMIC
COSN26551707 2466 COSMIC
COSN7203049 2482 COSMIC
COSN31564835 2543 COSMIC
COSN26556956 2549 COSMIC
COSN21954635 2627 COSMIC
COSN25977026 2643 COSMIC
COSN6022760 2661 COSMIC
COSN8969777 2681 COSMIC
COSN32063966 2698 COSMIC
COSN30176566 2892 COSMIC
COSN31606923 2942 COSMIC
COSN24297697 2950 COSMIC
COSN26565657 3012 COSMIC
COSN7468793 3073 COSMIC
COSN31514167 3105 COSMIC
COSN30165450 3259 COSMIC
COSN31570355 3259 COSMIC
COSN8637490 3337 COSMIC
COSN31539130 3440 COSMIC
COSN31546770 3446 COSMIC
COSN1430880 3450 COSMIC
COSN1430879 3451 COSMIC
COSN30173685 3520 COSMIC
COSN23411438 3559 COSMIC
COSN31517702 3580 COSMIC
COSN31489077 3629 COSMIC
COSN8433304 3675 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs773645638 5 dbSNP
rs370166585 7 dbSNP
rs775113591 8 dbSNP
rs769365768 9 dbSNP
rs3768021 10 dbSNP
rs868130728 17 dbSNP
rs776154929 18 dbSNP
rs770395096 19 dbSNP
rs1238903965 32 dbSNP
rs746931549 36 dbSNP
rs1166612304 37 dbSNP
rs759650508 42 dbSNP
rs777925244 45 dbSNP
rs1363581978 47 dbSNP
rs200205260 49 dbSNP
rs1424250754 58 dbSNP
rs1299048329 60 dbSNP
rs373580120 63 dbSNP
rs773344558 67 dbSNP
rs1270081795 68 dbSNP
rs1380506577 71 dbSNP
rs749817803 72 dbSNP
rs146420215 75 dbSNP
rs186983451 80 dbSNP
rs1221188232 81 dbSNP
rs1027983774 97 dbSNP
rs1448172456 99 dbSNP
rs994832935 101 dbSNP
rs1241057313 102 dbSNP
rs755632986 103 dbSNP
rs961984203 104 dbSNP
rs1014963562 111 dbSNP
rs1351367690 114 dbSNP
rs576163918 117 dbSNP
rs906705830 118 dbSNP
rs1159436795 120 dbSNP
rs980745069 124 dbSNP
rs1399230904 136 dbSNP
rs952061135 138 dbSNP
rs1359872250 139 dbSNP
rs1023831503 140 dbSNP
rs993754386 141 dbSNP
rs962561109 143 dbSNP
rs1012808865 154 dbSNP
rs182373024 156 dbSNP
rs1352354125 157 dbSNP
rs1007941410 158 dbSNP
rs1054008284 160 dbSNP
rs890848703 163 dbSNP
rs543865024 166 dbSNP
rs1442510967 175 dbSNP
rs1473269987 187 dbSNP
rs3768022 196 dbSNP
rs1460670598 198 dbSNP
rs557686086 200 dbSNP
rs1365367491 207 dbSNP
rs1468781035 207 dbSNP
rs996942113 209 dbSNP
rs796363914 211 dbSNP
rs533200351 223 dbSNP
rs1474471948 229 dbSNP
rs1239587817 231 dbSNP
rs781500087 232 dbSNP
rs556807719 233 dbSNP
rs1044068423 235 dbSNP
rs534696933 238 dbSNP
rs1305163407 239 dbSNP
rs1446951414 239 dbSNP
rs1333782912 244 dbSNP
rs911613533 246 dbSNP
rs1210711348 250 dbSNP
rs1345062548 257 dbSNP
rs1224846806 262 dbSNP
rs1260765076 267 dbSNP
rs1322695761 268 dbSNP
rs775010762 274 dbSNP
rs1376054633 275 dbSNP
rs1252330254 276 dbSNP
rs1435869189 278 dbSNP
rs1314639568 280 dbSNP
rs1245641112 283 dbSNP
rs866187110 287 dbSNP
rs1460352624 288 dbSNP
rs1181305675 289 dbSNP
rs1247532646 291 dbSNP
rs1481569154 298 dbSNP
rs1174327033 301 dbSNP
rs1372602222 304 dbSNP
rs1171178849 307 dbSNP
rs11572832 311 dbSNP
rs945311244 312 dbSNP
rs1430561881 313 dbSNP
rs1415932834 317 dbSNP
rs1187754817 318 dbSNP
rs747894987 319 dbSNP
rs77094478 321 dbSNP
rs190937299 322 dbSNP
rs1285483351 325 dbSNP
rs1409784570 332 dbSNP
rs1480562660 342 dbSNP
rs879497632 347 dbSNP
rs1250297668 349 dbSNP
rs535690445 351 dbSNP
rs1327712569 352 dbSNP
rs920519408 353 dbSNP
rs973254299 357 dbSNP
rs1232524537 358 dbSNP
rs754031489 362 dbSNP
rs11572833 364 dbSNP
rs1344330840 366 dbSNP
rs1389637177 369 dbSNP
rs952175984 371 dbSNP
rs747409872 374 dbSNP
rs544931443 380 dbSNP
rs185243950 383 dbSNP
rs1290377863 385 dbSNP
rs1490900553 390 dbSNP
rs1197608190 393 dbSNP
rs1458411819 401 dbSNP
rs962284313 402 dbSNP
rs1019085075 408 dbSNP
rs201367502 413 dbSNP
rs1014848967 414 dbSNP
rs1461968625 421 dbSNP
rs1164171348 423 dbSNP
rs144848582 423 dbSNP
rs398103695 423 dbSNP
rs771998273 423 dbSNP
rs748058972 428 dbSNP
rs1388731634 429 dbSNP
rs1382317855 434 dbSNP
rs1297159101 440 dbSNP
rs763233614 445 dbSNP
rs982063044 447 dbSNP
rs72735136 450 dbSNP
rs867335631 451 dbSNP
rs181362709 452 dbSNP
rs987578279 460 dbSNP
rs1024134966 461 dbSNP
rs1012449328 463 dbSNP
rs150035363 466 dbSNP
rs1415451558 469 dbSNP
rs770676279 472 dbSNP
rs11117604 474 dbSNP
rs1259795044 474 dbSNP
rs200351838 477 dbSNP
rs903556670 479 dbSNP
rs1443195723 481 dbSNP
rs916224536 485 dbSNP
rs1384190870 489 dbSNP
rs1382228401 493 dbSNP
rs1454039149 493 dbSNP
rs753498068 493 dbSNP
rs1270662620 494 dbSNP
rs188566154 498 dbSNP
rs1337325556 506 dbSNP
rs772782645 506 dbSNP
rs1384660471 508 dbSNP
rs1243536886 518 dbSNP
rs1314159295 520 dbSNP
rs11572834 521 dbSNP
rs527262243 528 dbSNP
rs1465453383 530 dbSNP
rs1354653979 532 dbSNP
rs1241514297 534 dbSNP
rs1041427752 549 dbSNP
rs1485595070 555 dbSNP
rs763802949 562 dbSNP
rs1211832889 568 dbSNP
rs1056375615 570 dbSNP
rs1323765661 579 dbSNP
rs890246882 581 dbSNP
rs1050565624 584 dbSNP
rs1290823513 588 dbSNP
rs931835704 596 dbSNP
rs939195616 597 dbSNP
rs905016889 599 dbSNP
rs1452454697 600 dbSNP
rs1045594526 601 dbSNP
rs1338490723 605 dbSNP
rs1450419208 617 dbSNP
rs930704433 618 dbSNP
rs1373868383 637 dbSNP
rs2809288 638 dbSNP
rs754910821 639 dbSNP
rs973306738 640 dbSNP
rs1324664049 646 dbSNP
rs1265135919 659 dbSNP
rs1322020055 662 dbSNP
rs1203660695 665 dbSNP
rs1433623406 666 dbSNP
rs940960415 668 dbSNP
rs940639008 673 dbSNP
rs987672344 675 dbSNP
rs752594359 677 dbSNP
rs1199478371 679 dbSNP
rs1430862265 683 dbSNP
rs982171963 692 dbSNP
rs971126575 693 dbSNP
rs1417807327 695 dbSNP
rs1354853876 698 dbSNP
rs1463364470 699 dbSNP
rs1296281266 705 dbSNP
rs975572168 709 dbSNP
rs1405844039 711 dbSNP
rs916673894 720 dbSNP
rs1022395415 729 dbSNP
rs1223371614 731 dbSNP
rs1274350242 734 dbSNP
rs1170801881 735 dbSNP
rs991290699 740 dbSNP
rs958207731 758 dbSNP
rs1009258221 759 dbSNP
rs548438725 763 dbSNP
rs1032542718 767 dbSNP
rs892123416 773 dbSNP
rs999676539 775 dbSNP
rs905028133 776 dbSNP
rs1198553696 782 dbSNP
rs1420109989 784 dbSNP
rs1430291765 787 dbSNP
rs966991617 788 dbSNP
rs778262939 790 dbSNP
rs1019871680 801 dbSNP
rs767350856 803 dbSNP
rs1141260 808 dbSNP
rs930734989 810 dbSNP
rs1363737941 814 dbSNP
rs1141261 827 dbSNP
rs1404444012 828 dbSNP
rs890077554 836 dbSNP
rs899225491 838 dbSNP
rs1141262 850 dbSNP
rs1050201391 853 dbSNP
rs1036838110 854 dbSNP
rs1436230357 855 dbSNP
rs140552660 870 dbSNP
rs562663810 875 dbSNP
rs543557647 876 dbSNP
rs1489745425 877 dbSNP
rs1220161154 880 dbSNP
rs780054584 882 dbSNP
rs1242256117 884 dbSNP
rs1486805808 888 dbSNP
rs1342826603 894 dbSNP
rs898906293 897 dbSNP
rs932196651 900 dbSNP
rs1217014803 911 dbSNP
rs1141263 913 dbSNP
rs1383585094 917 dbSNP
rs577766072 929 dbSNP
rs1424316429 930 dbSNP
rs922102155 942 dbSNP
rs1347104214 943 dbSNP
rs1369078013 946 dbSNP
rs940524402 948 dbSNP
rs1288805951 953 dbSNP
rs1383923646 955 dbSNP
rs978924828 957 dbSNP
rs1313443879 958 dbSNP
rs907829930 967 dbSNP
rs1046708832 973 dbSNP
rs949433744 974 dbSNP
rs1293817527 977 dbSNP
rs1441031962 979 dbSNP
rs1368257246 980 dbSNP
rs867331445 984 dbSNP
rs1310261371 987 dbSNP
rs773255768 989 dbSNP
rs1284271235 998 dbSNP
rs1430754044 999 dbSNP
rs4489629 1000 dbSNP
rs1247376319 1015 dbSNP
rs1461743818 1027 dbSNP
rs990825369 1034 dbSNP
rs1241103334 1039 dbSNP
rs78184111 1054 dbSNP
rs1159369187 1055 dbSNP
rs541052817 1055 dbSNP
rs572077662 1057 dbSNP
rs915025391 1061 dbSNP
rs1399047587 1064 dbSNP
rs555653894 1067 dbSNP
rs925355785 1078 dbSNP
rs1455111297 1092 dbSNP
rs988287302 1098 dbSNP
rs1272163045 1106 dbSNP
rs1174560386 1108 dbSNP
rs1382505098 1110 dbSNP
rs978290389 1117 dbSNP
rs1435049663 1125 dbSNP
rs1034643608 1138 dbSNP
rs1352164647 1142 dbSNP
rs1141265 1145 dbSNP
rs1221542899 1158 dbSNP
rs1176638369 1161 dbSNP
rs1468820646 1162 dbSNP
rs1324166170 1169 dbSNP
rs1205555617 1179 dbSNP
rs542465994 1181 dbSNP
rs1441643694 1182 dbSNP
rs1182733595 1184 dbSNP
rs1207080020 1189 dbSNP
rs12743866 1189 dbSNP
rs1468845387 1199 dbSNP
rs576562517 1201 dbSNP
rs4489628 1211 dbSNP
rs1008870935 1212 dbSNP
rs969264080 1214 dbSNP
rs954413165 1215 dbSNP
rs1029102810 1237 dbSNP
rs1410909644 1240 dbSNP
rs4409716 1246 dbSNP
rs1331339090 1258 dbSNP
rs1207923055 1272 dbSNP
rs995777937 1276 dbSNP
rs535938309 1282 dbSNP
rs1037405178 1283 dbSNP
rs1004679238 1285 dbSNP
rs184591891 1286 dbSNP
rs761912791 1294 dbSNP
rs1261196611 1296 dbSNP
rs1343977109 1298 dbSNP
rs1046324034 1300 dbSNP
rs1222657242 1301 dbSNP
rs1348273439 1307 dbSNP
rs1324313889 1309 dbSNP
rs1197844115 1316 dbSNP
rs1377529242 1318 dbSNP
rs1476055068 1320 dbSNP
rs776655034 1324 dbSNP
rs949357114 1326 dbSNP
rs1427346979 1328 dbSNP
rs898982594 1336 dbSNP
rs1036485262 1337 dbSNP
rs1289811294 1340 dbSNP
rs3738492 1344 dbSNP
rs1055577721 1345 dbSNP
rs1271650450 1348 dbSNP
rs936650393 1348 dbSNP
rs1227887731 1355 dbSNP
rs181482261 1365 dbSNP
rs932250489 1366 dbSNP
rs978133414 1367 dbSNP
rs922231534 1368 dbSNP
rs945544295 1369 dbSNP
rs1195959076 1390 dbSNP
rs912691083 1391 dbSNP
rs1360205336 1392 dbSNP
rs1167522715 1408 dbSNP
rs1385433568 1411 dbSNP
rs3738493 1415 dbSNP
rs954462970 1429 dbSNP
rs1291287356 1433 dbSNP
rs1028572354 1435 dbSNP
rs987888604 1440 dbSNP
rs533792528 1443 dbSNP
rs1414524264 1449 dbSNP
rs1434048457 1455 dbSNP
rs962980693 1459 dbSNP
rs1361843538 1465 dbSNP
rs1015968489 1466 dbSNP
rs568026618 1470 dbSNP
rs1004561303 1471 dbSNP
rs886177567 1473 dbSNP
rs1484207270 1474 dbSNP
rs1025251877 1475 dbSNP
rs548197884 1485 dbSNP
rs1013417165 1486 dbSNP
rs1015132610 1486 dbSNP
rs995157794 1486 dbSNP
rs757637209 1487 dbSNP
rs890513118 1487 dbSNP
rs1159837505 1489 dbSNP
rs1326448880 1493 dbSNP
rs1386336323 1497 dbSNP
rs1434358140 1509 dbSNP
rs866477057 1517 dbSNP
rs1269703866 1533 dbSNP
rs531590483 1536 dbSNP
rs1336378862 1550 dbSNP
rs866420742 1551 dbSNP
rs1043353358 1558 dbSNP
rs11572835 1559 dbSNP
rs1204872935 1573 dbSNP
rs1265328442 1580 dbSNP
rs936660254 1584 dbSNP
rs1053248342 1586 dbSNP
rs1255011316 1589 dbSNP
rs1419356665 1592 dbSNP
rs1183338949 1594 dbSNP
rs1380583187 1598 dbSNP
rs903833938 1600 dbSNP
rs1456577205 1604 dbSNP
rs552391494 1606 dbSNP
rs945470626 1607 dbSNP
rs532150461 1609 dbSNP
rs912627933 1623 dbSNP
rs1302084529 1627 dbSNP
rs540567455 1629 dbSNP
rs1393414482 1639 dbSNP
rs541089875 1642 dbSNP
rs1285791352 1647 dbSNP
rs1310998300 1650 dbSNP
rs953906289 1655 dbSNP
rs1299161909 1656 dbSNP
rs947783038 1658 dbSNP
rs1252318419 1666 dbSNP
rs1366887390 1667 dbSNP
rs1480752834 1667 dbSNP
rs916232097 1672 dbSNP
rs921522101 1676 dbSNP
rs974255612 1682 dbSNP
rs963029480 1683 dbSNP
rs1015913135 1687 dbSNP
rs17042654 1688 dbSNP
rs1471990750 1693 dbSNP
rs983061377 1694 dbSNP
rs779591207 1699 dbSNP
rs756757108 1711 dbSNP
rs1013846975 1712 dbSNP
rs190228678 1721 dbSNP
rs1354903956 1722 dbSNP
rs1463437696 1724 dbSNP
rs1249362441 1725 dbSNP
rs1463671417 1726 dbSNP
rs1208758830 1729 dbSNP
rs954531242 1730 dbSNP
rs1263286119 1732 dbSNP
rs1247509704 1742 dbSNP
rs1322679867 1747 dbSNP
rs894942165 1748 dbSNP
rs1305085845 1750 dbSNP
rs748844326 1752 dbSNP
rs1366099079 1755 dbSNP
rs777277031 1764 dbSNP
rs996213700 1772 dbSNP
rs1000754236 1776 dbSNP
rs900503095 1777 dbSNP
rs1230095199 1797 dbSNP
rs1022007737 1806 dbSNP
rs1482545088 1809 dbSNP
rs1367895159 1810 dbSNP
rs903757295 1811 dbSNP
rs1321324928 1812 dbSNP
rs1440212190 1817 dbSNP
rs1487460485 1818 dbSNP
rs1190567216 1820 dbSNP
rs1419908558 1835 dbSNP
rs1166530512 1836 dbSNP
rs1011842413 1842 dbSNP
rs1425600281 1845 dbSNP
rs1053345241 1850 dbSNP
rs1436313483 1854 dbSNP
rs1459311737 1855 dbSNP
rs1042433578 1858 dbSNP
rs1364475631 1863 dbSNP
rs1433303341 1864 dbSNP
rs562066773 1871 dbSNP
rs1297383930 1877 dbSNP
rs945391425 1880 dbSNP
rs755860647 1884 dbSNP
rs1051153290 1894 dbSNP
rs1447611790 1896 dbSNP
rs1291334097 1904 dbSNP
rs1319429030 1918 dbSNP
rs1220693864 1924 dbSNP
rs878960368 1924 dbSNP
rs541854515 1935 dbSNP
rs576713530 1938 dbSNP
rs1038490082 1945 dbSNP
rs907364371 1962 dbSNP
rs941641104 1966 dbSNP
rs1391911405 1968 dbSNP
rs1046221261 1972 dbSNP
rs1247260548 1975 dbSNP
rs908797439 1984 dbSNP
rs764634957 1989 dbSNP
rs1165714663 1991 dbSNP
rs950382318 2000 dbSNP
rs1411656658 2001 dbSNP
rs917663849 2009 dbSNP
rs1450518615 2012 dbSNP
rs1264895908 2015 dbSNP
rs1211257646 2024 dbSNP
rs1159975759 2026 dbSNP
rs556563793 2027 dbSNP
rs916256904 2033 dbSNP
rs1488562769 2040 dbSNP
rs1456165084 2052 dbSNP
rs991901469 2066 dbSNP
rs1320297409 2067 dbSNP
rs973450392 2069 dbSNP
rs1251115411 2077 dbSNP
rs1452852337 2085 dbSNP
rs146866473 2097 dbSNP
rs1376573947 2098 dbSNP
rs1344976770 2101 dbSNP
rs1033539549 2102 dbSNP
rs1284415776 2105 dbSNP
rs1000681071 2107 dbSNP
rs1206749243 2110 dbSNP
rs954582821 2118 dbSNP
rs1030082036 2119 dbSNP
rs974862729 2134 dbSNP
rs1235913098 2141 dbSNP
rs967993928 2150 dbSNP
rs34500958 2151 dbSNP
rs1472620092 2153 dbSNP
rs1387579805 2159 dbSNP
rs1020872729 2162 dbSNP
rs1009990788 2163 dbSNP
rs1427552492 2166 dbSNP
rs767395561 2168 dbSNP
rs3768024 2173 dbSNP
rs1471145215 2174 dbSNP
rs1051633132 2183 dbSNP
rs996970814 2185 dbSNP
rs1031963596 2186 dbSNP
rs1279567226 2190 dbSNP
rs1375431216 2191 dbSNP
rs899910067 2204 dbSNP
rs1287680466 2207 dbSNP
rs907374504 2218 dbSNP
rs1044549880 2226 dbSNP
rs1276308969 2229 dbSNP
rs1012012309 2232 dbSNP
rs1205489663 2249 dbSNP
rs894864714 2253 dbSNP
rs143920496 2256 dbSNP
rs941524855 2258 dbSNP
rs1469894008 2259 dbSNP
rs1250560097 2260 dbSNP
rs941723808 2266 dbSNP
rs1171180577 2267 dbSNP
rs1424911567 2269 dbSNP
rs907544682 2271 dbSNP
rs1203501613 2273 dbSNP
rs754791462 2274 dbSNP
rs1047266242 2280 dbSNP
rs928984534 2282 dbSNP
rs917563426 2287 dbSNP
rs992220580 2288 dbSNP
rs1346053951 2295 dbSNP
rs933202960 2298 dbSNP
rs959174783 2299 dbSNP
rs1344047175 2305 dbSNP
rs1215347003 2307 dbSNP
rs1343421066 2308 dbSNP
rs1277003602 2312 dbSNP
rs139067003 2321 dbSNP
rs1204512167 2323 dbSNP
rs1269775944 2334 dbSNP
rs751459359 2335 dbSNP
rs967839859 2351 dbSNP
rs1246443224 2366 dbSNP
rs1335443787 2369 dbSNP
rs1286660493 2370 dbSNP
rs558015450 2377 dbSNP
rs1352087768 2384 dbSNP
rs1009463004 2390 dbSNP
rs1167405707 2393 dbSNP
rs956064732 2395 dbSNP
rs1388383992 2401 dbSNP
rs1413848121 2402 dbSNP
rs1321528670 2406 dbSNP
rs1399914719 2409 dbSNP
rs115944412 2415 dbSNP
rs1003135749 2418 dbSNP
rs1466076678 2419 dbSNP
rs1299627734 2430 dbSNP
rs554599288 2435 dbSNP
rs1029687943 2437 dbSNP
rs997252438 2442 dbSNP
rs1292518838 2443 dbSNP
rs1410828519 2463 dbSNP
rs369096309 2467 dbSNP
rs537436491 2468 dbSNP
rs1179552026 2473 dbSNP
rs185720750 2478 dbSNP
rs1253006684 2481 dbSNP
rs1208538322 2483 dbSNP
rs761827134 2493 dbSNP
rs1038383993 2494 dbSNP
rs1187222590 2496 dbSNP
rs1289751564 2505 dbSNP
rs867093214 2506 dbSNP
rs1005680646 2509 dbSNP
rs898652333 2511 dbSNP
rs1037893288 2512 dbSNP
rs1187550668 2514 dbSNP
rs1368487643 2516 dbSNP
rs1458968474 2522 dbSNP
rs887256271 2524 dbSNP
rs1389912446 2527 dbSNP
rs1457772001 2529 dbSNP
rs1322223616 2535 dbSNP
rs11572836 2545 dbSNP
rs1434585610 2550 dbSNP
rs1230465801 2555 dbSNP
rs886111787 2557 dbSNP
rs1342525365 2564 dbSNP
rs950361261 2569 dbSNP
rs1264993660 2570 dbSNP
rs1279943628 2571 dbSNP
rs896036181 2573 dbSNP
rs879083009 2593 dbSNP
rs1056170617 2595 dbSNP
rs766002879 2601 dbSNP
rs1464745294 2606 dbSNP
rs1207665670 2614 dbSNP
rs1256397637 2615 dbSNP
rs1425249278 2621 dbSNP
rs1446963630 2621 dbSNP
rs532188936 2624 dbSNP
rs1367387038 2625 dbSNP
rs1472846992 2629 dbSNP
rs1336064552 2631 dbSNP
rs926365881 2633 dbSNP
rs1038935894 2645 dbSNP
rs1387270197 2646 dbSNP
rs1386137532 2654 dbSNP
rs1456482869 2655 dbSNP
rs1303259962 2656 dbSNP
rs1156246730 2657 dbSNP
rs1458511069 2661 dbSNP
rs11572837 2665 dbSNP
rs1412202220 2665 dbSNP
rs11572838 2666 dbSNP
rs796327194 2666 dbSNP
rs757408808 2667 dbSNP
rs946549739 2667 dbSNP
rs1351197632 2677 dbSNP
rs1230722451 2679 dbSNP
rs1287035367 2687 dbSNP
rs555346732 2688 dbSNP
rs764220671 2690 dbSNP
rs571266504 2693 dbSNP
rs547487012 2703 dbSNP
rs1432292286 2706 dbSNP
rs1198389139 2713 dbSNP
rs1188853044 2719 dbSNP
rs990643019 2721 dbSNP
rs1183767133 2725 dbSNP
rs1409628713 2731 dbSNP
rs988362457 2737 dbSNP
rs956074548 2738 dbSNP
rs546876629 2739 dbSNP
rs924622579 2743 dbSNP
rs527826080 2748 dbSNP
rs955358955 2751 dbSNP
rs1302508485 2759 dbSNP
rs1210613273 2765 dbSNP
rs1371198923 2770 dbSNP
rs1411703862 2773 dbSNP
rs971371673 2776 dbSNP
rs1029986318 2778 dbSNP
rs1023668975 2779 dbSNP
rs1289389134 2789 dbSNP
rs1230566961 2802 dbSNP
rs1013164331 2804 dbSNP
rs963204566 2807 dbSNP
rs1249065114 2813 dbSNP
rs1017066800 2816 dbSNP
rs1353976426 2822 dbSNP
rs975447508 2827 dbSNP
rs1005937504 2829 dbSNP
rs1285952518 2831 dbSNP
rs193238923 2836 dbSNP
rs886165682 2849 dbSNP
rs1175139909 2850 dbSNP
rs562030703 2852 dbSNP
rs963976963 2856 dbSNP
rs1431934721 2857 dbSNP
rs542242828 2877 dbSNP
rs531585514 2888 dbSNP
rs1016995984 2891 dbSNP
rs1005566033 2892 dbSNP
rs1366169168 2901 dbSNP
rs997166325 2901 dbSNP
rs1365464145 2909 dbSNP
rs1230163063 2916 dbSNP
rs1271781966 2922 dbSNP
rs11572839 2924 dbSNP
rs1222164483 2928 dbSNP
rs1025833475 2929 dbSNP
rs2809287 2931 dbSNP
rs577524315 2933 dbSNP
rs1248416653 2934 dbSNP
rs1451500370 2939 dbSNP
rs1056414002 2949 dbSNP
rs549141557 2950 dbSNP
rs560623597 2951 dbSNP
rs867482022 2952 dbSNP
rs1406000273 2953 dbSNP
rs530654066 2954 dbSNP
rs1348635439 2961 dbSNP
rs904836695 2962 dbSNP
rs1321554488 2968 dbSNP
rs11572840 2970 dbSNP
rs1294988569 2979 dbSNP
rs946477420 2984 dbSNP
rs574518248 2995 dbSNP
rs148636656 2996 dbSNP
rs537866412 2998 dbSNP
rs201563931 2999 dbSNP
rs772522274 2999 dbSNP
rs764054247 3001 dbSNP
rs982935631 3011 dbSNP
rs951535962 3017 dbSNP
rs1473284212 3018 dbSNP
rs1291791933 3029 dbSNP
rs1183663909 3030 dbSNP
rs546762074 3032 dbSNP
rs997219352 3035 dbSNP
rs774937214 3042 dbSNP
rs1391238937 3048 dbSNP
rs1455947410 3054 dbSNP
rs1341420054 3057 dbSNP
rs1295285404 3058 dbSNP
rs901509232 3059 dbSNP
rs1230053751 3066 dbSNP
rs1362038722 3068 dbSNP
rs1448308742 3073 dbSNP
rs1141266 3076 dbSNP
rs1141267 3077 dbSNP
rs1304022702 3091 dbSNP
rs1017237356 3096 dbSNP
rs747943310 3097 dbSNP
rs1232255731 3100 dbSNP
rs922547531 3105 dbSNP
rs1007902462 3106 dbSNP
rs1226334906 3112 dbSNP
rs1331206965 3112 dbSNP
rs1283383035 3114 dbSNP
rs975280062 3119 dbSNP
rs1212525079 3120 dbSNP
rs1304160638 3132 dbSNP
rs1429474166 3138 dbSNP
rs964029390 3139 dbSNP
rs934511246 3140 dbSNP
rs1369297509 3146 dbSNP
rs903012038 3148 dbSNP
rs774079271 3150 dbSNP
rs1158347168 3151 dbSNP
rs1016921153 3152 dbSNP
rs1171015996 3158 dbSNP
rs984069337 3162 dbSNP
rs1450241390 3171 dbSNP
rs1335816590 3172 dbSNP
rs1357111564 3179 dbSNP
rs951503652 3186 dbSNP
rs1413610416 3198 dbSNP
rs1308175679 3199 dbSNP
rs1352252991 3216 dbSNP
rs1141268 3217 dbSNP
rs1278674958 3219 dbSNP
rs915908530 3222 dbSNP
rs1221111316 3223 dbSNP
rs1276729766 3230 dbSNP
rs991479818 3230 dbSNP
rs1205939881 3233 dbSNP
rs771622441 3234 dbSNP
rs941339850 3237 dbSNP
rs1482328383 3240 dbSNP
rs1181749466 3242 dbSNP
rs1247615648 3242 dbSNP
rs748743220 3252 dbSNP
rs575095019 3261 dbSNP
rs910164207 3267 dbSNP
rs186760462 3272 dbSNP
rs768622413 3273 dbSNP
rs1026140176 3274 dbSNP
rs982987617 3275 dbSNP
rs1433790153 3278 dbSNP
rs766306200 3291 dbSNP
rs558821807 3297 dbSNP
rs183531214 3298 dbSNP
rs1199945808 3303 dbSNP
rs965795514 3306 dbSNP
rs755698568 3307 dbSNP
rs1438320577 3309 dbSNP
rs1001758071 3313 dbSNP
rs1017706685 3323 dbSNP
rs1370519397 3324 dbSNP
rs1229415211 3325 dbSNP
rs539620423 3331 dbSNP
rs1482599893 3333 dbSNP
rs1340174435 3338 dbSNP
rs904762052 3345 dbSNP
rs143952448 3351 dbSNP
rs544344344 3352 dbSNP
rs550858150 3353 dbSNP
rs1252773396 3357 dbSNP
rs573165373 3368 dbSNP
rs892223067 3372 dbSNP
rs998770746 3379 dbSNP
rs1052575600 3382 dbSNP
rs1166859747 3383 dbSNP
rs1369332705 3383 dbSNP
rs1283497153 3390 dbSNP
rs933860335 3406 dbSNP
rs780854975 3411 dbSNP
rs922401553 3413 dbSNP
rs1349010665 3417 dbSNP
rs1039500185 3420 dbSNP
rs756213238 3429 dbSNP
rs1310169198 3436 dbSNP
rs11572841 3438 dbSNP
rs1300056238 3438 dbSNP
rs57590675 3438 dbSNP
rs761339678 3438 dbSNP
rs781728288 3438 dbSNP
rs1462955939 3446 dbSNP
rs1208596569 3447 dbSNP
rs1359054800 3448 dbSNP
rs894580776 3454 dbSNP
rs1272889646 3455 dbSNP
rs942646316 3456 dbSNP
rs909799165 3461 dbSNP
rs536022576 3462 dbSNP
rs568568296 3467 dbSNP
rs530853991 3468 dbSNP
rs1426427522 3471 dbSNP
rs951422377 3473 dbSNP
rs941403979 3488 dbSNP
rs1426212846 3490 dbSNP
rs548365374 3492 dbSNP
rs1158704630 3493 dbSNP
rs1311902370 3498 dbSNP
rs1457554208 3498 dbSNP
rs1381872006 3502 dbSNP
rs191756662 3503 dbSNP
rs909882783 3505 dbSNP
rs918679880 3510 dbSNP
rs1342363887 3511 dbSNP
rs1243197865 3514 dbSNP
rs1471696947 3515 dbSNP
rs1293177827 3534 dbSNP
rs1047305020 3557 dbSNP
rs993297748 3558 dbSNP
rs1266697294 3586 dbSNP
rs922786710 3586 dbSNP
rs960247832 3589 dbSNP
rs562693217 3593 dbSNP
rs1001684356 3598 dbSNP
rs1256703299 3602 dbSNP
rs1236796041 3608 dbSNP
rs1207469647 3614 dbSNP
rs986277134 3628 dbSNP
rs1361868259 3629 dbSNP
rs1307941866 3638 dbSNP
rs968993760 3641 dbSNP
rs754701807 3648 dbSNP
rs957101460 3653 dbSNP
rs1412987809 3654 dbSNP
rs1312410908 3676 dbSNP
rs149498781 3680 dbSNP
rs1010579086 3681 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' agguAGUCCUCAGUACCUUCGa 5'
              | | |||  |||||||| 
Target 5' ----UGAAGAGAGAUGGAAGC- 3'
1 - 17
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000361525.3 | 3UTR | UGAAGAGAGAUGGAAGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
BRCA 0.47 0.06 0.224 0.24 12 Click to see details
LUSC -0.312 0.23 -0.381 0.18 8 Click to see details
HNSC 0.381 0.23 0.600 0.1 6 Click to see details
BLCA -0.661 0.27 -0.500 0.33 3 Click to see details
BLCA -0.661 0.27 -0.500 0.33 3 Click to see details
BLCA -0.661 0.27 -0.500 0.33 3 Click to see details
BLCA -0.661 0.27 -0.500 0.33 3 Click to see details
84 hsa-miR-2115-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT155281 IFNAR2 interferon alpha and beta receptor subunit 2 2 6
MIRT257301 MYLIP myosin regulatory light chain interacting protein 2 8
MIRT441907 SEPN1 selenoprotein N 2 2
MIRT442300 ZNF496 zinc finger protein 496 2 2
MIRT468235 SGK1 serum/glucocorticoid regulated kinase 1 2 2
MIRT469331 RGP1 RGP1 homolog, RAB6A GEF complex partner 1 2 2
MIRT470203 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT475945 GXYLT1 glucoside xylosyltransferase 1 2 4
MIRT481449 ARRB2 arrestin beta 2 2 2
MIRT497440 SLC16A10 solute carrier family 16 member 10 2 2
MIRT498270 KIAA1644 KIAA1644 2 2
MIRT499225 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT501742 NSD1 nuclear receptor binding SET domain protein 1 2 2
MIRT501762 NRF1 nuclear respiratory factor 1 2 6
MIRT527902 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT528559 DNAAF3 dynein axonemal assembly factor 3 2 2
MIRT531252 PDF peptide deformylase, mitochondrial 2 2
MIRT539490 ACTN4 actinin alpha 4 2 2
MIRT550683 YARS tyrosyl-tRNA synthetase 2 2
MIRT573441 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT616740 DCTN5 dynactin subunit 5 2 2
MIRT617626 RAB3IP RAB3A interacting protein 2 2
MIRT620780 MT1A metallothionein 1A 2 2
MIRT623174 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 2
MIRT624880 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT625799 MDC1 mediator of DNA damage checkpoint 1 2 2
MIRT629790 CHRFAM7A CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion 2 2
MIRT630535 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT630762 ZNF445 zinc finger protein 445 2 2
MIRT630921 UNC93A unc-93 homolog A 2 2
MIRT630949 PANK1 pantothenate kinase 1 2 2
MIRT631688 NQO2 N-ribosyldihydronicotinamide:quinone reductase 2 2 2
MIRT633898 FGF10 fibroblast growth factor 10 2 2
MIRT635935 PLA2G12A phospholipase A2 group XIIA 2 2
MIRT636177 THBD thrombomodulin 2 2
MIRT636730 AFAP1 actin filament associated protein 1 2 2
MIRT638038 SHPK sedoheptulokinase 2 2
MIRT639164 LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 2 2
MIRT639260 MANEAL mannosidase endo-alpha like 2 2
MIRT639327 C9orf41 carnosine N-methyltransferase 1 2 2
MIRT639849 YY1 YY1 transcription factor 2 2
MIRT641474 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT642783 CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3 2 2
MIRT643653 MYOCD myocardin 2 2
MIRT645717 PTPRF protein tyrosine phosphatase, receptor type F 2 2
MIRT648018 SLCO4C1 solute carrier organic anion transporter family member 4C1 2 2
MIRT648236 C15orf40 chromosome 15 open reading frame 40 2 2
MIRT648563 MEMO1 mediator of cell motility 1 2 2
MIRT648731 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT650179 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT650721 TNFSF8 TNF superfamily member 8 2 2
MIRT652179 TRIM44 tripartite motif containing 44 2 2
MIRT654272 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT654493 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT654861 PPM1F protein phosphatase, Mg2+/Mn2+ dependent 1F 2 2
MIRT656392 MCU mitochondrial calcium uniporter 2 2
MIRT656623 LRRC15 leucine rich repeat containing 15 2 2
MIRT657085 JMY junction mediating and regulatory protein, p53 cofactor 2 2
MIRT659793 CBLB Cbl proto-oncogene B 2 2
MIRT660155 BRCC3 BRCA1/BRCA2-containing complex subunit 3 2 2
MIRT662444 SERPINB5 serpin family B member 5 2 2
MIRT663116 SPTA1 spectrin alpha, erythrocytic 1 2 2
MIRT665759 TMEM43 transmembrane protein 43 2 2
MIRT666357 SIKE1 suppressor of IKBKE 1 2 2
MIRT668521 ESRRG estrogen related receptor gamma 2 2
MIRT677776 FKTN fukutin 2 2
MIRT678900 TTLL12 tubulin tyrosine ligase like 12 2 2
MIRT702825 HOOK3 hook microtubule tethering protein 3 2 2
MIRT704424 CTNNBIP1 catenin beta interacting protein 1 2 2
MIRT709470 KRTAP19-1 keratin associated protein 19-1 2 2
MIRT710939 MRPL45 mitochondrial ribosomal protein L45 2 2
MIRT713306 TYRP1 tyrosinase related protein 1 2 2
MIRT716932 FAM13A family with sequence similarity 13 member A 2 2
MIRT717539 PYGO2 pygopus family PHD finger 2 2 2
MIRT718060 CYP3A5 cytochrome P450 family 3 subfamily A member 5 2 2
MIRT718934 TRIM66 tripartite motif containing 66 2 2
MIRT719770 ZNF236 zinc finger protein 236 2 2
MIRT720164 PNPO pyridoxamine 5'-phosphate oxidase 2 2
MIRT721280 RAD54L2 RAD54 like 2 2 2
MIRT721359 ENTHD1 ENTH domain containing 1 2 2
MIRT721506 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT721920 LINGO2 leucine rich repeat and Ig domain containing 2 2 2
MIRT722791 FUT4 fucosyltransferase 4 2 2
MIRT723933 SVOP SV2 related protein 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2115 Docetaxel+Cisplatin+5-Fluorouracil sensitive tissue (hypopharyngeal squamous cell carcinoma)
hsa-mir-2115 Decitabine 451668 approved sensitive tissue (esopheageal cancer)
hsa-miR-2115-5p Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-miR-2115-5p Tamoxifen 2733525 NSC180973 approved sensitive cell line (LCC2)
hsa-miR-2115-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2115-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

Error report submission