pre-miRNA Information
pre-miRNA hsa-mir-4480   
Genomic Coordinates chr10: 12578753 - 12578823
Description Homo sapiens miR-4480 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4480
Sequence 44| AGCCAAGUGGAAGUUACUUUA |64
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 10 + 12578796 23291724, 27587585 MiREDiBase
A-to-I 12 10 + 12578807 23291724, 27587585 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs929437808 7 dbSNP
rs1454494557 9 dbSNP
rs1345041659 17 dbSNP
rs561601367 21 dbSNP
Putative Targets

Gene Information
Gene Symbol DAAM1   
Synonyms -
Description dishevelled associated activator of morphogenesis 1
Transcript NM_014992   
Expression
Putative miRNA Targets on DAAM1
3'UTR of DAAM1
(miRNA target sites are highlighted)
>DAAM1|NM_014992|3'UTR
   1 TTTTCCATGAATACTTTTTTTTAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCCTTGCA
  81 ATCCAAACAGTGGCAATTTTTTCCTTCATCTGTGAGTGAATGTGTGAACGTGTGTATGTAAATGTATGTGTGTATATATT
 161 AAAAAATGTATATAGATGTCTGAGTGTTGTCTGGAGACCTATACGTATGGTTAAAAAGATTTATGTTAATGTATGTGCTC
 241 CAAAACCTTTCGTGTATGCATTCACATTGAGTGTGGCTCATTTTCTTTCCCCGAACGCCATGACTGTTCAGAAGCACAAT
 321 ACTATCTCCTGAAAGAGATAAGAGACATTCCCTAGATTCAAAGGCAAAACAGAAGAAACAAACAAACAAACAAAAAAAGC
 401 TTGCAAAATATTTTATGGTTTCCAAGCTTGATATCCTTTAAAATTATTTTCATTGATGGAACTGGAGTTGTTGGAAAAAC
 481 ATAGATTTAAAATGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACCAGCTTTGAATTTCT
 561 GACATTGGTGTGGGGATACAGTCTGTAAATGTTTATTGAGAACATCTTGCACACAATTTGAATTATGTAGAATGTCAATC
 641 AAGTTTTTGTATATTTAAAAGTTGGACATCAATTTTTTCCCCTGATTTCATCAAGTTATCTCTGCCAAGTGCTCTTGATA
 721 ATTTCTTCAGATTTTTGGAAAAAAACACTATATAAATGCAATCCATGCTTTTTTTAAAGAACAACATTGCCAGAGTATGC
 801 TTGTTCTAACAATATAGATATATAAACCTTAAAAATAATAAAATATCTCACCCAAGACTTAAAGGAAGAATTCTCTGAAG
 881 GGATAAAGATTACTAAAAAAAAAAAAAAAAAAAAAAAATTAATGGGGTGCCTTTTTGTTATAGTTTCTATTTTCTGTTTT
 961 GTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATACATAAAGAATGCACAAAATGTCAACATCAGCA
1041 GAGATGCCCAGATCTATTTATCTCTAAGTATATTTGAAGTGATTGCTGTTTATATGTTGTCATTTTAAAATTGTGTGTCA
1121 GTAAAGCTACCTGTAAAATTTCAGTCCAAAAAAATAAAGCTCTCAGGGAGACATGAATAAAATCAATGAACATTAGAAAA
1201 TAAAATATAGATGCTTACCATTAACCTACCAACTCTTAATATCCTTAAATTATGTGATATATAAAGAGGACTGTTACTTT
1281 TTTACTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTGCTTTATTTATTTGTAGTTGGGGGCTAACGTTTTCTCTTTTCT
1361 TTCTATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGCACTAGAACATTATTTACTCACTA
1441 AATTGAGTTTTTCAGTCAATTAACAAATATTTATTAAGTTCCTACTATGTACCAGGCATAGTAGGGCTACAATGGTAAGC
1521 AAGACAGAGTCCCTGCCCCCAAAGAGCTTATATTCTAATGGGGATATTAAGGGATGAATAGAATACCAATGTGTGCACTG
1601 TACAGGAATCATACTATTTAAAAATAATTTGTATAAACTATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGA
1681 AAGCTGTGAAATAGTGCTCTAAGAGTTGTCAAGAGCTGTGGTTTTACATCTTTTCCTCATTGCAAATTTAGTGACTTTCT
1761 ACACACTATATGGAAATAAATGACTAGCAAATAAAACAGTCATAAATACAAAGCAGAGGTTGCACTCCCCCAATCCCGAG
1841 TTAACCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAGATT
1921 GGAATATAATGATGGTTTTGTCTGTTCCTTAACTAAAGTGCCTCTATGTATATTCTTTTCTATTTGTAGCAGGATAAATT
2001 TGGTCTGGCTCAGTTTTGGAACTGTATTTTGAAAATGGCTTTGTCTTACAGTTTAAGGAATAGACAGGTGGAGGGAAAGT
2081 CACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCTTTTAATCATCCTCCTTTGATATGGCCATCCTGGTGGGC
2161 CTCCTTTGCCATTTCCATTTTTGGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAAGAAA
2241 AAAAAAAAACAAAAAAAAAACCTACTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATTTT
2321 AAACTTTTTTTGTTTTTTTAAATTAATGCCAAAAAGAAAATGCATAATTTGTAAACTTAATTATATGTCTTATATCTTAT
2401 TAGCTTAGTAGTTGGAACCACTTAGTCTTTAGGTGCAAGACTGTTGTTAGATAGTACTGAGAAAAAAAAAGTATGTGTTA
2481 TGAGACTGTACATGTTTTTTTAAAAATAGCAATATGCAATAAAGAGATGAATTCATTGGGTGTACA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' auuucauugaaggUGAACCGa 5'
                       ||||||| 
Target 5' ggtgcagatagagACTTGGCt 3'
1873 - 1893 140.00 -10.50
2
miRNA  3' auUUCAU---UGAA---GGUGAACCga 5'
            |||||   ||||   :| |||||  
Target 5' gtAAGTAGCCACTTTTCTCTCTTGGgt 3'
2285 - 2311 115.00 -11.90
3
miRNA  3' auuUCAUUGAAGGUGAACCGa 5'
             || |:  |  |:||||: 
Target 5' tgtAGCAGGATAAATTTGGTc 3'
1985 - 2005 114.00 -7.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30106989 7 COSMIC
COSN31551451 9 COSMIC
COSN2375202 23 COSMIC
COSN31545418 40 COSMIC
COSN30494194 42 COSMIC
COSN31499284 45 COSMIC
COSN31544895 70 COSMIC
COSN23014650 74 COSMIC
COSN31568610 84 COSMIC
COSN31545163 90 COSMIC
COSN30121114 99 COSMIC
COSN30541866 142 COSMIC
COSN23739522 205 COSMIC
COSN31551961 206 COSMIC
COSN26576402 253 COSMIC
COSN20111359 392 COSMIC
COSN29768417 392 COSMIC
COSN6542550 392 COSMIC
COSN9616231 417 COSMIC
COSN31565181 442 COSMIC
COSN1655534 479 COSMIC
COSN31514184 527 COSMIC
COSN23014651 565 COSMIC
COSN31609628 646 COSMIC
COSN26888404 653 COSMIC
COSN31608464 689 COSMIC
COSN31609624 690 COSMIC
COSN22893578 746 COSMIC
COSN20111360 776 COSMIC
COSN27853352 1030 COSMIC
COSN23035540 1285 COSMIC
COSN24367320 1286 COSMIC
COSN25046259 1313 COSMIC
COSN1169499 1324 COSMIC
COSN27051876 2122 COSMIC
COSN14472630 2251 COSMIC
COSN26451661 2380 COSMIC
rs117932605 1063 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs749760388 5 dbSNP
rs771427432 8 dbSNP
rs370993803 10 dbSNP
rs906950382 11 dbSNP
rs1268244953 13 dbSNP
rs1162460877 14 dbSNP
rs549891331 15 dbSNP
rs769002003 15 dbSNP
rs772529255 15 dbSNP
rs1438085627 18 dbSNP
rs745993473 19 dbSNP
rs1393206770 23 dbSNP
rs1170745347 25 dbSNP
rs1406792016 25 dbSNP
rs776431844 29 dbSNP
rs772247632 31 dbSNP
rs777057259 32 dbSNP
rs775922743 33 dbSNP
rs1322507388 34 dbSNP
rs1342779777 34 dbSNP
rs1191757890 35 dbSNP
rs761879305 35 dbSNP
rs760939421 36 dbSNP
rs1038792931 37 dbSNP
rs1233630320 39 dbSNP
rs768351034 42 dbSNP
rs776423576 43 dbSNP
rs199921625 46 dbSNP
rs1464691004 58 dbSNP
rs574862246 60 dbSNP
rs1031895570 61 dbSNP
rs567853632 62 dbSNP
rs1348420174 68 dbSNP
rs1021514759 70 dbSNP
rs1397004105 71 dbSNP
rs892062239 76 dbSNP
rs1298299362 86 dbSNP
rs1443906406 92 dbSNP
rs1352468296 94 dbSNP
rs999529051 97 dbSNP
rs1329304682 110 dbSNP
rs1375968357 112 dbSNP
rs1435739106 117 dbSNP
rs560060368 118 dbSNP
rs1172347326 119 dbSNP
rs1454256088 123 dbSNP
rs527480746 123 dbSNP
rs1408783624 124 dbSNP
rs1024882179 130 dbSNP
rs377272140 131 dbSNP
rs183827420 135 dbSNP
rs966025241 137 dbSNP
rs1232143965 138 dbSNP
rs1282248610 142 dbSNP
rs1208610013 147 dbSNP
rs1311592002 147 dbSNP
rs1251516887 153 dbSNP
rs531335760 156 dbSNP
rs1370645603 157 dbSNP
rs980182732 162 dbSNP
rs997514784 168 dbSNP
rs1017030198 169 dbSNP
rs1415736642 172 dbSNP
rs1200841105 173 dbSNP
rs1377622296 173 dbSNP
rs962668112 176 dbSNP
rs972740309 179 dbSNP
rs189248274 185 dbSNP
rs1346383566 187 dbSNP
rs1191876844 190 dbSNP
rs142569402 192 dbSNP
rs953516213 199 dbSNP
rs1198493263 200 dbSNP
rs1407469218 201 dbSNP
rs532155171 202 dbSNP
rs929194888 203 dbSNP
rs761664232 205 dbSNP
rs765220330 206 dbSNP
rs146897503 209 dbSNP
rs1038726174 211 dbSNP
rs928257043 213 dbSNP
rs567216819 232 dbSNP
rs1314645250 239 dbSNP
rs1266982836 241 dbSNP
rs1233503227 243 dbSNP
rs193101432 245 dbSNP
rs757882388 252 dbSNP
rs891491507 253 dbSNP
rs111534784 259 dbSNP
rs1332703044 260 dbSNP
rs1024602192 291 dbSNP
rs1291169029 293 dbSNP
rs182651306 294 dbSNP
rs537922483 297 dbSNP
rs1001709040 298 dbSNP
rs1463205400 318 dbSNP
rs556252454 320 dbSNP
rs556770979 322 dbSNP
rs1423046891 324 dbSNP
rs1017000514 325 dbSNP
rs577572787 339 dbSNP
rs972864922 360 dbSNP
rs1188166986 367 dbSNP
rs1317644607 367 dbSNP
rs1484882358 367 dbSNP
rs1246870107 371 dbSNP
rs1244458138 376 dbSNP
rs200183197 376 dbSNP
rs901825529 376 dbSNP
rs545049118 377 dbSNP
rs553643123 380 dbSNP
rs554143361 380 dbSNP
rs1223007430 383 dbSNP
rs1267740225 384 dbSNP
rs1487582919 387 dbSNP
rs1177590721 388 dbSNP
rs1365186600 388 dbSNP
rs574229930 388 dbSNP
rs774027805 388 dbSNP
rs1209242370 389 dbSNP
rs1264181007 391 dbSNP
rs1029020139 392 dbSNP
rs1172344679 392 dbSNP
rs74057123 392 dbSNP
rs953485429 392 dbSNP
rs1489373155 395 dbSNP
rs1247347404 396 dbSNP
rs3742647 396 dbSNP
rs57222312 397 dbSNP
rs987791493 398 dbSNP
rs79036859 399 dbSNP
rs773812801 400 dbSNP
rs911821718 405 dbSNP
rs943177821 410 dbSNP
rs778011635 416 dbSNP
rs1253441022 419 dbSNP
rs1006388458 432 dbSNP
rs1341997016 435 dbSNP
rs1016879714 440 dbSNP
rs1236535206 443 dbSNP
rs1368834278 452 dbSNP
rs1323027484 454 dbSNP
rs974566649 454 dbSNP
rs1288893419 458 dbSNP
rs1392169843 463 dbSNP
rs576202460 468 dbSNP
rs935740948 474 dbSNP
rs1427594806 475 dbSNP
rs1389431645 476 dbSNP
rs1397793918 479 dbSNP
rs972686047 479 dbSNP
rs572408669 482 dbSNP
rs928890207 483 dbSNP
rs991182551 493 dbSNP
rs891454587 496 dbSNP
rs1482951317 500 dbSNP
rs1281542205 504 dbSNP
rs757421799 514 dbSNP
rs1346413771 521 dbSNP
rs949751740 521 dbSNP
rs1274334112 523 dbSNP
rs1239868231 527 dbSNP
rs1229240051 531 dbSNP
rs1337699209 531 dbSNP
rs1315437732 535 dbSNP
rs4901920 545 dbSNP
rs947157070 547 dbSNP
rs187646378 549 dbSNP
rs934527849 550 dbSNP
rs906124959 569 dbSNP
rs1286887361 570 dbSNP
rs1470215188 571 dbSNP
rs1365140833 572 dbSNP
rs901125210 574 dbSNP
rs1472087384 576 dbSNP
rs1489301324 577 dbSNP
rs1190602787 578 dbSNP
rs1214800736 580 dbSNP
rs1278554382 583 dbSNP
rs1262739173 584 dbSNP
rs933302972 584 dbSNP
rs1266363643 586 dbSNP
rs1483457988 590 dbSNP
rs1227997030 593 dbSNP
rs1050427088 598 dbSNP
rs1001678010 602 dbSNP
rs878984397 609 dbSNP
rs1027385609 612 dbSNP
rs1016354005 615 dbSNP
rs749598338 616 dbSNP
rs1305796357 620 dbSNP
rs1401259167 627 dbSNP
rs1156391062 634 dbSNP
rs1386465552 634 dbSNP
rs897965323 637 dbSNP
rs191564201 638 dbSNP
rs1418130902 639 dbSNP
rs898693943 653 dbSNP
rs1417303488 655 dbSNP
rs1157743678 656 dbSNP
rs1331347611 657 dbSNP
rs1359307833 659 dbSNP
rs1449226672 661 dbSNP
rs993693859 667 dbSNP
rs1304904034 668 dbSNP
rs140616059 673 dbSNP
rs542983519 673 dbSNP
rs1377398814 674 dbSNP
rs879412530 679 dbSNP
rs991144820 679 dbSNP
rs1283430781 688 dbSNP
rs1431369944 692 dbSNP
rs1310618623 694 dbSNP
rs1356032866 695 dbSNP
rs748809271 700 dbSNP
rs143886796 701 dbSNP
rs1317877428 705 dbSNP
rs1433732526 706 dbSNP
rs1025766386 712 dbSNP
rs1285596919 719 dbSNP
rs955522894 723 dbSNP
rs1403290467 738 dbSNP
rs1312944382 739 dbSNP
rs1008241970 740 dbSNP
rs978894840 744 dbSNP
rs1388870680 745 dbSNP
rs1187946232 747 dbSNP
rs758134411 749 dbSNP
rs532141222 753 dbSNP
rs1255002100 768 dbSNP
rs1219617929 769 dbSNP
rs3842328 769 dbSNP
rs397841776 769 dbSNP
rs1288872163 770 dbSNP
rs1214945920 774 dbSNP
rs79466889 776 dbSNP
rs934474211 776 dbSNP
rs964582209 785 dbSNP
rs1294829588 792 dbSNP
rs922518735 792 dbSNP
rs1254068625 800 dbSNP
rs1329892003 804 dbSNP
rs150391620 805 dbSNP
rs1179240701 807 dbSNP
rs1369200785 808 dbSNP
rs1168470781 811 dbSNP
rs1239928480 815 dbSNP
rs1437278613 820 dbSNP
rs1189612433 823 dbSNP
rs1477783006 825 dbSNP
rs1204899171 826 dbSNP
rs148610261 827 dbSNP
rs1483931891 830 dbSNP
rs1049642071 831 dbSNP
rs1204326298 833 dbSNP
rs1348580886 834 dbSNP
rs1302763882 835 dbSNP
rs1216976765 836 dbSNP
rs1366405435 836 dbSNP
rs1279800302 841 dbSNP
rs1411315433 843 dbSNP
rs1177403842 844 dbSNP
rs1348988255 847 dbSNP
rs1307869283 848 dbSNP
rs1435877785 849 dbSNP
rs370995237 853 dbSNP
rs1173970969 855 dbSNP
rs1414000661 856 dbSNP
rs1425454203 856 dbSNP
rs1179137580 860 dbSNP
rs1415865129 861 dbSNP
rs1249336682 862 dbSNP
rs1181273729 863 dbSNP
rs1485921259 869 dbSNP
rs925783009 878 dbSNP
rs1207362315 880 dbSNP
rs1173494673 884 dbSNP
rs1311067491 885 dbSNP
rs1357848760 885 dbSNP
rs144161497 893 dbSNP
rs1250902357 894 dbSNP
rs1348314050 894 dbSNP
rs1210061172 895 dbSNP
rs1228240164 895 dbSNP
rs1234241348 895 dbSNP
rs1267125132 895 dbSNP
rs1311091504 895 dbSNP
rs1322565129 895 dbSNP
rs1323848958 895 dbSNP
rs1326571593 895 dbSNP
rs1363360041 895 dbSNP
rs1381913165 895 dbSNP
rs1388124310 895 dbSNP
rs1433009888 895 dbSNP
rs72238797 895 dbSNP
rs878859623 895 dbSNP
rs957269017 895 dbSNP
rs988930498 896 dbSNP
rs1332637353 897 dbSNP
rs1379687659 898 dbSNP
rs1444684507 899 dbSNP
rs1308573723 900 dbSNP
rs1459681384 912 dbSNP
rs912985912 916 dbSNP
rs1368356562 919 dbSNP
rs1369961132 919 dbSNP
rs1390723572 920 dbSNP
rs949720470 920 dbSNP
rs1045418974 921 dbSNP
rs1276750910 923 dbSNP
rs1463187178 923 dbSNP
rs1311456416 924 dbSNP
rs1489291906 925 dbSNP
rs889078645 928 dbSNP
rs1057445959 929 dbSNP
rs1244526129 931 dbSNP
rs1264048577 931 dbSNP
rs1308543089 932 dbSNP
rs1198965850 935 dbSNP
rs1491015276 939 dbSNP
rs375186099 940 dbSNP
rs1259927569 942 dbSNP
rs942060157 943 dbSNP
rs1038163106 951 dbSNP
rs897939525 957 dbSNP
rs1291514980 960 dbSNP
rs1457236972 962 dbSNP
rs1371043717 971 dbSNP
rs1197490170 980 dbSNP
rs184094119 990 dbSNP
rs937562824 996 dbSNP
rs1478719786 999 dbSNP
rs1389000695 1000 dbSNP
rs952350355 1001 dbSNP
rs1038666704 1002 dbSNP
rs1264846648 1003 dbSNP
rs898661427 1004 dbSNP
rs1209570762 1006 dbSNP
rs895994599 1011 dbSNP
rs994349077 1015 dbSNP
rs1203609265 1021 dbSNP
rs1342154295 1034 dbSNP
rs1281042874 1036 dbSNP
rs1235527037 1041 dbSNP
rs1329511711 1045 dbSNP
rs757770953 1051 dbSNP
rs188867818 1053 dbSNP
rs1480322741 1055 dbSNP
rs1309686741 1057 dbSNP
rs1171776320 1060 dbSNP
rs117932605 1063 dbSNP
rs528500977 1065 dbSNP
rs976549114 1077 dbSNP
rs45476291 1079 dbSNP
rs1375535856 1080 dbSNP
rs762333545 1080 dbSNP
rs1472745016 1091 dbSNP
rs1018218306 1097 dbSNP
rs985322801 1104 dbSNP
rs909812936 1112 dbSNP
rs1279977793 1114 dbSNP
rs1202206901 1121 dbSNP
rs1438696642 1134 dbSNP
rs1342920261 1141 dbSNP
rs1255537368 1150 dbSNP
rs1240011389 1152 dbSNP
rs772243719 1155 dbSNP
rs942013408 1167 dbSNP
rs1219030729 1173 dbSNP
rs567722415 1192 dbSNP
rs538055874 1197 dbSNP
rs919334274 1198 dbSNP
rs929340140 1209 dbSNP
rs1397760520 1212 dbSNP
rs1171552380 1213 dbSNP
rs1399412333 1213 dbSNP
rs1457381218 1228 dbSNP
rs1218004318 1231 dbSNP
rs1057239416 1232 dbSNP
rs895963530 1236 dbSNP
rs1452842545 1238 dbSNP
rs1218668899 1240 dbSNP
rs1245796129 1253 dbSNP
rs1488391051 1255 dbSNP
rs1255556390 1256 dbSNP
rs28530645 1260 dbSNP
rs1426294248 1265 dbSNP
rs571450619 1271 dbSNP
rs1226308087 1272 dbSNP
rs1266498681 1272 dbSNP
rs1477038553 1274 dbSNP
rs1167913112 1277 dbSNP
rs1246889573 1278 dbSNP
rs1284622946 1278 dbSNP
rs149022406 1284 dbSNP
rs1005384331 1285 dbSNP
rs1332863268 1285 dbSNP
rs1435215449 1285 dbSNP
rs1165430160 1286 dbSNP
rs1189247436 1286 dbSNP
rs1211428241 1286 dbSNP
rs1246312010 1286 dbSNP
rs1249970726 1286 dbSNP
rs1290237411 1286 dbSNP
rs1314329772 1286 dbSNP
rs1318085657 1286 dbSNP
rs1368415243 1286 dbSNP
rs1414961151 1286 dbSNP
rs1452472460 1286 dbSNP
rs1466335608 1286 dbSNP
rs1468114581 1286 dbSNP
rs1472059042 1286 dbSNP
rs398025271 1286 dbSNP
rs762319877 1286 dbSNP
rs764549187 1286 dbSNP
rs770604295 1286 dbSNP
rs1415072874 1287 dbSNP
rs1407164728 1288 dbSNP
rs1321614822 1291 dbSNP
rs1365216113 1293 dbSNP
rs868210521 1294 dbSNP
rs988672735 1295 dbSNP
rs1300267750 1296 dbSNP
rs1325878674 1299 dbSNP
rs1403978695 1304 dbSNP
rs1390600743 1305 dbSNP
rs79124757 1305 dbSNP
rs1338241985 1306 dbSNP
rs1429685864 1307 dbSNP
rs1388391749 1312 dbSNP
rs1433954633 1312 dbSNP
rs1451935360 1312 dbSNP
rs764124108 1312 dbSNP
rs1188007947 1313 dbSNP
rs1284725724 1314 dbSNP
rs1358320521 1315 dbSNP
rs912946725 1318 dbSNP
rs1226150772 1319 dbSNP
rs1200681113 1320 dbSNP
rs1290453579 1323 dbSNP
rs369682842 1324 dbSNP
rs373124223 1328 dbSNP
rs1260585359 1331 dbSNP
rs1487513972 1332 dbSNP
rs1192849069 1333 dbSNP
rs1238576421 1334 dbSNP
rs1474034262 1335 dbSNP
rs1213493403 1337 dbSNP
rs971151556 1337 dbSNP
rs1161940793 1344 dbSNP
rs1367810915 1348 dbSNP
rs1384752568 1353 dbSNP
rs981215379 1355 dbSNP
rs1345253199 1356 dbSNP
rs1160690631 1360 dbSNP
rs1432092462 1361 dbSNP
rs1369255136 1366 dbSNP
rs78026133 1370 dbSNP
rs904795091 1375 dbSNP
rs1334521540 1377 dbSNP
rs1427400973 1377 dbSNP
rs1000264934 1381 dbSNP
rs775669195 1390 dbSNP
rs1267911914 1393 dbSNP
rs1182636848 1403 dbSNP
rs1483962895 1406 dbSNP
rs1038592471 1412 dbSNP
rs1445797313 1414 dbSNP
rs1249560626 1417 dbSNP
rs1314274882 1422 dbSNP
rs538633906 1423 dbSNP
rs1312233766 1455 dbSNP
rs1031368706 1460 dbSNP
rs920188934 1461 dbSNP
rs1377084498 1464 dbSNP
rs780545187 1468 dbSNP
rs1289309398 1471 dbSNP
rs1412088986 1473 dbSNP
rs1349126978 1475 dbSNP
rs997853043 1479 dbSNP
rs553779788 1482 dbSNP
rs1241596666 1483 dbSNP
rs930112051 1484 dbSNP
rs1360951813 1491 dbSNP
rs1174129756 1494 dbSNP
rs1414054653 1507 dbSNP
rs1412992467 1513 dbSNP
rs1159567035 1517 dbSNP
rs1283454427 1520 dbSNP
rs1409539792 1522 dbSNP
rs1176532251 1526 dbSNP
rs1483572387 1528 dbSNP
rs1349439953 1532 dbSNP
rs1204945932 1538 dbSNP
rs1207426223 1545 dbSNP
rs371440790 1550 dbSNP
rs1460560551 1561 dbSNP
rs572427633 1563 dbSNP
rs1047210295 1567 dbSNP
rs1268401728 1574 dbSNP
rs1229893384 1577 dbSNP
rs192251683 1582 dbSNP
rs891318562 1590 dbSNP
rs541110168 1596 dbSNP
rs1029387604 1605 dbSNP
rs576110003 1607 dbSNP
rs1301105906 1610 dbSNP
rs1444464287 1610 dbSNP
rs1186137433 1611 dbSNP
rs1243005031 1612 dbSNP
rs899807399 1621 dbSNP
rs1322775062 1626 dbSNP
rs1455893199 1632 dbSNP
rs185536352 1634 dbSNP
rs1032858969 1640 dbSNP
rs149587665 1647 dbSNP
rs1453372336 1654 dbSNP
rs145077206 1661 dbSNP
rs962698569 1662 dbSNP
rs1443444826 1663 dbSNP
rs919225073 1671 dbSNP
rs553905065 1673 dbSNP
rs929310447 1675 dbSNP
rs115977789 1676 dbSNP
rs1260438834 1677 dbSNP
rs559056903 1678 dbSNP
rs1323978850 1689 dbSNP
rs1336006507 1700 dbSNP
rs971670634 1706 dbSNP
rs948845298 1714 dbSNP
rs1400867625 1722 dbSNP
rs981185577 1736 dbSNP
rs1034102586 1737 dbSNP
rs747253960 1739 dbSNP
rs1288017450 1740 dbSNP
rs1334628448 1741 dbSNP
rs958325227 1751 dbSNP
rs1351443007 1755 dbSNP
rs1161571131 1756 dbSNP
rs1276248599 1759 dbSNP
rs116853914 1762 dbSNP
rs1202106769 1765 dbSNP
rs1390248696 1766 dbSNP
rs919609568 1767 dbSNP
rs1426307869 1769 dbSNP
rs1260665156 1779 dbSNP
rs1263089172 1782 dbSNP
rs1489647478 1789 dbSNP
rs1053784092 1791 dbSNP
rs776359410 1792 dbSNP
rs1222320988 1794 dbSNP
rs1201041937 1796 dbSNP
rs930231611 1796 dbSNP
rs574062572 1799 dbSNP
rs891440534 1799 dbSNP
rs1326048122 1801 dbSNP
rs1302200877 1804 dbSNP
rs1388767762 1816 dbSNP
rs983474775 1817 dbSNP
rs912729512 1820 dbSNP
rs953820462 1823 dbSNP
rs944213966 1824 dbSNP
rs1039731309 1827 dbSNP
rs1199931221 1831 dbSNP
rs1371153401 1838 dbSNP
rs1379519307 1839 dbSNP
rs1006676751 1846 dbSNP
rs899942905 1854 dbSNP
rs1460060982 1856 dbSNP
rs1372030132 1860 dbSNP
rs561675332 1861 dbSNP
rs1176270940 1874 dbSNP
rs936649972 1877 dbSNP
rs1053694411 1880 dbSNP
rs1434554449 1886 dbSNP
rs1267127146 1891 dbSNP
rs1476926200 1894 dbSNP
rs892489021 1896 dbSNP
rs1175382551 1902 dbSNP
rs531782227 1905 dbSNP
rs1467153966 1908 dbSNP
rs1329193622 1916 dbSNP
rs1203678716 1919 dbSNP
rs549998861 1922 dbSNP
rs1338776204 1923 dbSNP
rs1256680555 1928 dbSNP
rs1010145309 1932 dbSNP
rs1310734687 1933 dbSNP
rs1281128120 1936 dbSNP
rs571388189 1941 dbSNP
rs1350997648 1953 dbSNP
rs374325499 1956 dbSNP
rs1389626528 1962 dbSNP
rs1395069254 1968 dbSNP
rs1002715094 1969 dbSNP
rs1034076510 1971 dbSNP
rs1386783658 1973 dbSNP
rs1426834473 1983 dbSNP
rs1176128244 1990 dbSNP
rs1473102511 1995 dbSNP
rs972652571 2003 dbSNP
rs1325134268 2011 dbSNP
rs1328951734 2012 dbSNP
rs1222102620 2021 dbSNP
rs958426738 2027 dbSNP
rs1256951165 2037 dbSNP
rs918512818 2043 dbSNP
rs1262796161 2044 dbSNP
rs1460133242 2044 dbSNP
rs34373219 2045 dbSNP
rs868259106 2061 dbSNP
rs973847977 2064 dbSNP
rs1329538817 2066 dbSNP
rs1289996007 2067 dbSNP
rs992850241 2071 dbSNP
rs759303642 2072 dbSNP
rs1335166027 2079 dbSNP
rs1312785276 2082 dbSNP
rs1397315610 2085 dbSNP
rs547886466 2089 dbSNP
rs15087 2090 dbSNP
rs1457457144 2092 dbSNP
rs1391210174 2094 dbSNP
rs951159341 2109 dbSNP
rs536654002 2112 dbSNP
rs912811752 2113 dbSNP
rs1210446990 2118 dbSNP
rs944179372 2120 dbSNP
rs554563894 2121 dbSNP
rs1189672035 2131 dbSNP
rs1442814941 2136 dbSNP
rs1242632050 2151 dbSNP
rs1209532040 2153 dbSNP
rs1466424334 2155 dbSNP
rs921458624 2168 dbSNP
rs1198926846 2169 dbSNP
rs1349836974 2171 dbSNP
rs1284671871 2174 dbSNP
rs1424127731 2177 dbSNP
rs936746768 2177 dbSNP
rs190439817 2179 dbSNP
rs537226091 2185 dbSNP
rs1313745593 2189 dbSNP
rs926104949 2202 dbSNP
rs1366988727 2210 dbSNP
rs1478671310 2214 dbSNP
rs141777515 2226 dbSNP
rs1168454465 2227 dbSNP
rs1400533300 2229 dbSNP
rs1391941485 2232 dbSNP
rs1372375670 2233 dbSNP
rs1457992799 2237 dbSNP
rs1384610898 2238 dbSNP
rs200661270 2238 dbSNP
rs370426049 2238 dbSNP
rs869095386 2238 dbSNP
rs936187472 2239 dbSNP
rs574289809 2240 dbSNP
rs1053347274 2244 dbSNP
rs543255596 2244 dbSNP
rs892078744 2245 dbSNP
rs1404006180 2246 dbSNP
rs1298420137 2247 dbSNP
rs1357279928 2247 dbSNP
rs1341598103 2248 dbSNP
rs202200377 2249 dbSNP
rs933640576 2249 dbSNP
rs1268005628 2250 dbSNP
rs767630604 2250 dbSNP
rs879318913 2250 dbSNP
rs1331982264 2251 dbSNP
rs1403630634 2251 dbSNP
rs1952320 2251 dbSNP
rs33914773 2251 dbSNP
rs398025272 2251 dbSNP
rs1365566765 2252 dbSNP
rs6573253 2252 dbSNP
rs1431745147 2253 dbSNP
rs201372738 2261 dbSNP
rs1294075601 2263 dbSNP
rs558814209 2270 dbSNP
rs1478483552 2278 dbSNP
rs1247066204 2282 dbSNP
rs889525314 2283 dbSNP
rs11848423 2290 dbSNP
rs1307377617 2300 dbSNP
rs1489833630 2300 dbSNP
rs182190226 2301 dbSNP
rs1205824578 2308 dbSNP
rs1308696411 2317 dbSNP
rs773171439 2321 dbSNP
rs1245653453 2325 dbSNP
rs1270289275 2325 dbSNP
rs1345360225 2330 dbSNP
rs1267340332 2332 dbSNP
rs11540528 2333 dbSNP
rs1357338812 2333 dbSNP
rs1222099092 2334 dbSNP
rs1055622884 2351 dbSNP
rs1345397097 2353 dbSNP
rs1309120997 2355 dbSNP
rs184353341 2362 dbSNP
rs765897306 2367 dbSNP
rs995251333 2370 dbSNP
rs1184511366 2372 dbSNP
rs1415245409 2388 dbSNP
rs898299383 2390 dbSNP
rs1260998734 2395 dbSNP
rs1424372944 2397 dbSNP
rs1178288610 2401 dbSNP
rs1479310696 2404 dbSNP
rs1027151164 2420 dbSNP
rs1481577811 2421 dbSNP
rs1230672593 2423 dbSNP
rs751014768 2423 dbSNP
rs1423451123 2430 dbSNP
rs994435949 2431 dbSNP
rs1201417521 2433 dbSNP
rs1323206942 2434 dbSNP
rs1025538965 2438 dbSNP
rs754627995 2445 dbSNP
rs1225971718 2448 dbSNP
rs960650579 2448 dbSNP
rs992819186 2448 dbSNP
rs1024276266 2452 dbSNP
rs1004297022 2454 dbSNP
rs1019838042 2455 dbSNP
rs965584122 2460 dbSNP
rs1469493888 2462 dbSNP
rs775369998 2462 dbSNP
rs970050658 2462 dbSNP
rs980189122 2462 dbSNP
rs553038988 2463 dbSNP
rs921427363 2468 dbSNP
rs1405759884 2471 dbSNP
rs1176091025 2474 dbSNP
rs1472815560 2474 dbSNP
rs1244464958 2476 dbSNP
rs1181306000 2477 dbSNP
rs574302201 2483 dbSNP
rs1460651950 2484 dbSNP
rs1269151239 2487 dbSNP
rs989541352 2488 dbSNP
rs1287446242 2492 dbSNP
rs541853570 2493 dbSNP
rs913484322 2493 dbSNP
rs374914348 2494 dbSNP
rs1051294629 2495 dbSNP
rs796591488 2495 dbSNP
rs889425121 2500 dbSNP
rs942373593 2502 dbSNP
rs1452184695 2503 dbSNP
rs1038109835 2510 dbSNP
rs1245249140 2511 dbSNP
rs767193060 2517 dbSNP
rs1289205842 2520 dbSNP
rs1287040940 2521 dbSNP
rs898259915 2522 dbSNP
rs1158220726 2535 dbSNP
rs1046811133 2537 dbSNP
rs146249982 2539 dbSNP
rs1483447260 2546 dbSNP
rs1183599464 2547 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' auuucauugaaggUGAACCGa 5'
                       ||||||| 
Target 5' --------uagagACUUGGCu 3'
1 - 13
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' auuucauugaaggUGAACCGa 5'
                       ||||||| 
Target 5' ------gauagagACUUGGCu 3'
1 - 15
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000395125.1 | 3UTR | UAGAGACUUGGCUCAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000395125.1 | 3UTR | GAUAGAGACUUGGCUCAAAAAGGCUUGGAGAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
117 hsa-miR-4480 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT056040 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT091259 FXR1 FMR1 autosomal homolog 1 2 4
MIRT117347 MAPRE2 microtubule associated protein RP/EB family member 2 2 2
MIRT234960 ZNF439 zinc finger protein 439 2 4
MIRT441356 ZNF75A zinc finger protein 75a 2 2
MIRT441426 STXBP2 syntaxin binding protein 2 2 2
MIRT441455 ZNF488 zinc finger protein 488 2 4
MIRT441524 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT441576 EXOC5 exocyst complex component 5 2 2
MIRT441597 ABCB5 ATP binding cassette subfamily B member 5 2 6
MIRT441610 ATP13A4 ATPase 13A4 2 2
MIRT441698 CIT citron rho-interacting serine/threonine kinase 2 2
MIRT441714 FGF9 fibroblast growth factor 9 2 2
MIRT441784 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT441795 EXOSC2 exosome component 2 2 2
MIRT441868 RNASEL ribonuclease L 2 2
MIRT441900 SLC9A8 solute carrier family 9 member A8 2 6
MIRT441919 FAM217B family with sequence similarity 217 member B 2 2
MIRT441928 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT441938 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT442157 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT442172 AZF1 azoospermia factor 1 2 2
MIRT442208 IRS1 insulin receptor substrate 1 2 2
MIRT442237 DDX19A DEAD-box helicase 19A 2 2
MIRT442366 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442572 SDC1 syndecan 1 2 2
MIRT442604 ZNF391 zinc finger protein 391 2 2
MIRT442609 MRC1 mannose receptor C-type 1 2 2
MIRT442647 POP4 POP4 homolog, ribonuclease P/MRP subunit 2 2
MIRT442658 OIP5 Opa interacting protein 5 2 6
MIRT442686 COX15 COX15, cytochrome c oxidase assembly homolog 2 2
MIRT442773 JAG1 jagged 1 2 2
MIRT442785 CHD8 chromodomain helicase DNA binding protein 8 2 2
MIRT442895 PLCB3 phospholipase C beta 3 2 2
MIRT442941 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT442959 SGCD sarcoglycan delta 2 2
MIRT442998 EDAR ectodysplasin A receptor 2 2
MIRT443017 C21orf91 chromosome 21 open reading frame 91 2 2
MIRT443064 CASP5 caspase 5 2 2
MIRT443069 ABLIM1 actin binding LIM protein 1 2 2
MIRT443208 VPS36 vacuolar protein sorting 36 homolog 2 2
MIRT443237 ANKRD26 ankyrin repeat domain 26 2 2
MIRT443253 A1CF APOBEC1 complementation factor 2 2
MIRT443329 JUN Jun proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT443333 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT443349 STX7 syntaxin 7 2 2
MIRT443452 CLIC5 chloride intracellular channel 5 2 2
MIRT443547 GPR35 G protein-coupled receptor 35 2 2
MIRT443616 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT443626 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT443730 ALPK3 alpha kinase 3 2 2
MIRT443786 ST13 ST13, Hsp70 interacting protein 2 2
MIRT443852 RGS6 regulator of G protein signaling 6 2 2
MIRT445483 KLF5 Kruppel like factor 5 2 2
MIRT471105 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT472329 NETO2 neuropilin and tolloid like 2 2 4
MIRT472391 NDRG3 NDRG family member 3 2 2
MIRT473522 MAX MYC associated factor X 2 2
MIRT473874 MAFK MAF bZIP transcription factor K 2 6
MIRT476021 GTF2A1 general transcription factor IIA subunit 1 2 2
MIRT478320 DDN dendrin 2 2
MIRT492049 TNFSF9 TNF superfamily member 9 2 2
MIRT494851 ANKRD24 ankyrin repeat domain 24 2 2
MIRT494991 TSSC1 EARP complex and GARP complex interacting protein 1 2 2
MIRT495034 RASSF2 Ras association domain family member 2 2 2
MIRT495111 NOL10 nucleolar protein 10 2 2
MIRT495113 TRADD TNFRSF1A associated via death domain 2 2
MIRT495131 METTL24 methyltransferase like 24 2 2
MIRT495147 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT495297 NUP54 nucleoporin 54 2 2
MIRT495341 RTN2 reticulon 2 2 2
MIRT495347 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT496682 DUSP18 dual specificity phosphatase 18 2 2
MIRT496743 TGFBR1 transforming growth factor beta receptor 1 2 2
MIRT496841 KCNIP2 potassium voltage-gated channel interacting protein 2 2 2
MIRT496852 GPAM glycerol-3-phosphate acyltransferase, mitochondrial 2 2
MIRT496889 FOXP1 forkhead box P1 2 2
MIRT496922 CLMN calmin 2 2
MIRT496990 TMEM231 transmembrane protein 231 2 2
MIRT497002 SNAP25 synaptosome associated protein 25 2 2
MIRT497058 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT500529 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 6
MIRT506048 PPP6C protein phosphatase 6 catalytic subunit 2 4
MIRT512163 CD164 CD164 molecule 2 6
MIRT527051 RDH13 retinol dehydrogenase 13 2 2
MIRT532282 TNFSF14 TNF superfamily member 14 2 2
MIRT534083 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT534605 RNASEH1 ribonuclease H1 2 4
MIRT539509 ACSS3 acyl-CoA synthetase short chain family member 3 2 2
MIRT543069 ARID4B AT-rich interaction domain 4B 2 2
MIRT544233 CCBL2 kynurenine aminotransferase 3 2 2
MIRT544686 ZNF224 zinc finger protein 224 2 4
MIRT546269 TMEM30A transmembrane protein 30A 2 4
MIRT559069 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT562768 RMI2 RecQ mediated genome instability 2 2 2
MIRT563974 HCFC1 host cell factor C1 2 2
MIRT564086 NSA2 NSA2, ribosome biogenesis homolog 2 2
MIRT564525 PDXP pyridoxal phosphatase 2 2
MIRT564613 ZNF703 zinc finger protein 703 2 2
MIRT566252 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT614420 ZNF440 zinc finger protein 440 2 2
MIRT618789 MTHFR methylenetetrahydrofolate reductase 2 2
MIRT619160 PPDPF pancreatic progenitor cell differentiation and proliferation factor 2 2
MIRT641778 ZDHHC7 zinc finger DHHC-type containing 7 2 4
MIRT653680 SLC25A36 solute carrier family 25 member 36 2 2
MIRT657861 GJD2 gap junction protein delta 2 2 2
MIRT660879 ADCYAP1R1 ADCYAP receptor type I 2 2
MIRT668781 DAAM1 dishevelled associated activator of morphogenesis 1 2 4
MIRT688559 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT695393 WDR41 WD repeat domain 41 2 2
MIRT698680 TCEA1 transcription elongation factor A1 2 2
MIRT700974 PDIA6 protein disulfide isomerase family A member 6 2 2
MIRT705055 C5orf15 chromosome 5 open reading frame 15 2 2
MIRT705864 AFF1 AF4/FMR2 family member 1 2 2
MIRT710586 CDCA4 cell division cycle associated 4 2 2
MIRT713904 IGF2R insulin like growth factor 2 receptor 2 2
MIRT717133 SKI SKI proto-oncogene 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved resistant cell line (A549)

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