pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol DAAM1   
Synonyms -
Description dishevelled associated activator of morphogenesis 1
Transcript NM_014992   
Expression
Putative miRNA Targets on DAAM1
3'UTR of DAAM1
(miRNA target sites are highlighted)
>DAAM1|NM_014992|3'UTR
   1 TTTTCCATGAATACTTTTTTTTAGAAAGCTCATTAGCAGCCCTCTAAAGTGACTAGAACGTTTCATTACACTGCCTTGCA
  81 ATCCAAACAGTGGCAATTTTTTCCTTCATCTGTGAGTGAATGTGTGAACGTGTGTATGTAAATGTATGTGTGTATATATT
 161 AAAAAATGTATATAGATGTCTGAGTGTTGTCTGGAGACCTATACGTATGGTTAAAAAGATTTATGTTAATGTATGTGCTC
 241 CAAAACCTTTCGTGTATGCATTCACATTGAGTGTGGCTCATTTTCTTTCCCCGAACGCCATGACTGTTCAGAAGCACAAT
 321 ACTATCTCCTGAAAGAGATAAGAGACATTCCCTAGATTCAAAGGCAAAACAGAAGAAACAAACAAACAAACAAAAAAAGC
 401 TTGCAAAATATTTTATGGTTTCCAAGCTTGATATCCTTTAAAATTATTTTCATTGATGGAACTGGAGTTGTTGGAAAAAC
 481 ATAGATTTAAAATGATTTTTGATAGCTGACATTGTGATGTTGATGTATCACATCAGTAATAGGACCAGCTTTGAATTTCT
 561 GACATTGGTGTGGGGATACAGTCTGTAAATGTTTATTGAGAACATCTTGCACACAATTTGAATTATGTAGAATGTCAATC
 641 AAGTTTTTGTATATTTAAAAGTTGGACATCAATTTTTTCCCCTGATTTCATCAAGTTATCTCTGCCAAGTGCTCTTGATA
 721 ATTTCTTCAGATTTTTGGAAAAAAACACTATATAAATGCAATCCATGCTTTTTTTAAAGAACAACATTGCCAGAGTATGC
 801 TTGTTCTAACAATATAGATATATAAACCTTAAAAATAATAAAATATCTCACCCAAGACTTAAAGGAAGAATTCTCTGAAG
 881 GGATAAAGATTACTAAAAAAAAAAAAAAAAAAAAAAAATTAATGGGGTGCCTTTTTGTTATAGTTTCTATTTTCTGTTTT
 961 GTAGGACAAGCTGCATTTTCTGTAAATATAGGTCTGGACTAAAGGATACATAAAGAATGCACAAAATGTCAACATCAGCA
1041 GAGATGCCCAGATCTATTTATCTCTAAGTATATTTGAAGTGATTGCTGTTTATATGTTGTCATTTTAAAATTGTGTGTCA
1121 GTAAAGCTACCTGTAAAATTTCAGTCCAAAAAAATAAAGCTCTCAGGGAGACATGAATAAAATCAATGAACATTAGAAAA
1201 TAAAATATAGATGCTTACCATTAACCTACCAACTCTTAATATCCTTAAATTATGTGATATATAAAGAGGACTGTTACTTT
1281 TTTACTTTTTTTTTTTTTTTTTTTTTTTTTTGGCTTTGCTTTATTTATTTGTAGTTGGGGGCTAACGTTTTCTCTTTTCT
1361 TTCTATTGATCCTGTTGTGGTTGGGTTTCCTGTGGAGAGAGTAGTTTGTCCTGTTGCACTAGAACATTATTTACTCACTA
1441 AATTGAGTTTTTCAGTCAATTAACAAATATTTATTAAGTTCCTACTATGTACCAGGCATAGTAGGGCTACAATGGTAAGC
1521 AAGACAGAGTCCCTGCCCCCAAAGAGCTTATATTCTAATGGGGATATTAAGGGATGAATAGAATACCAATGTGTGCACTG
1601 TACAGGAATCATACTATTTAAAAATAATTTGTATAAACTATAATGCTTAGCACAGATGGCGAGTTATCTGTGCTATGTGA
1681 AAGCTGTGAAATAGTGCTCTAAGAGTTGTCAAGAGCTGTGGTTTTACATCTTTTCCTCATTGCAAATTTAGTGACTTTCT
1761 ACACACTATATGGAAATAAATGACTAGCAAATAAAACAGTCATAAATACAAAGCAGAGGTTGCACTCCCCCAATCCCGAG
1841 TTAACCCAGGTCTGCAATAACACCATGTTAAAGGTGCAGATAGAGACTTGGCTCAAAAAGGCTTGGAGATGAGGAAGATT
1921 GGAATATAATGATGGTTTTGTCTGTTCCTTAACTAAAGTGCCTCTATGTATATTCTTTTCTATTTGTAGCAGGATAAATT
2001 TGGTCTGGCTCAGTTTTGGAACTGTATTTTGAAAATGGCTTTGTCTTACAGTTTAAGGAATAGACAGGTGGAGGGAAAGT
2081 CACATAAAGGAGCAAGTTTGTGTAGCTGTCCCTCTTGCCCCTTTTAATCATCCTCCTTTGATATGGCCATCCTGGTGGGC
2161 CTCCTTTGCCATTTCCATTTTTGGTTTCTTTCCCTGAAAACTGTGTGCAGGTAATTCCATGTGCCATTGTTGAAAAGAAA
2241 AAAAAAAAACAAAAAAAAAACCTACTTTTTAGATTGGTGCTGGTGTAAGTAGCCACTTTTCTCTCTTGGGTGTGTATTTT
2321 AAACTTTTTTTGTTTTTTTAAATTAATGCCAAAAAGAAAATGCATAATTTGTAAACTTAATTATATGTCTTATATCTTAT
2401 TAGCTTAGTAGTTGGAACCACTTAGTCTTTAGGTGCAAGACTGTTGTTAGATAGTACTGAGAAAAAAAAAGTATGTGTTA
2481 TGAGACTGTACATGTTTTTTTAAAAATAGCAATATGCAATAAAGAGATGAATTCATTGGGTGTACA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucgGUCGGU-UGAGUGUCACGUCu 5'
             || ||| ::| | :|||||| 
Target 5' taaCA-CCATGTTAAAGGTGCAGa 3'
1858 - 1880 139.00 -16.80
2
miRNA  3' ucGGUCGGUUGAGUGUCACGUCu 5'
            || |  ||||    |||||| 
Target 5' tcCCTGAAAACTGT--GTGCAGg 3'
2191 - 2211 124.00 -15.50
3
miRNA  3' ucGGUCGGUU-GAGUGUCACGUcu 5'
            ||| ::|: ||:  :|||||  
Target 5' aaCCACTTAGTCTTTAGGTGCAag 3'
2416 - 2439 121.00 -12.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30106989 7 COSMIC
COSN31551451 9 COSMIC
COSN2375202 23 COSMIC
COSN31545418 40 COSMIC
COSN30494194 42 COSMIC
COSN31499284 45 COSMIC
COSN31544895 70 COSMIC
COSN23014650 74 COSMIC
COSN31568610 84 COSMIC
COSN31545163 90 COSMIC
COSN30121114 99 COSMIC
COSN30541866 142 COSMIC
COSN23739522 205 COSMIC
COSN31551961 206 COSMIC
COSN26576402 253 COSMIC
COSN20111359 392 COSMIC
COSN29768417 392 COSMIC
COSN6542550 392 COSMIC
COSN9616231 417 COSMIC
COSN31565181 442 COSMIC
COSN1655534 479 COSMIC
COSN31514184 527 COSMIC
COSN23014651 565 COSMIC
COSN31609628 646 COSMIC
COSN26888404 653 COSMIC
COSN31608464 689 COSMIC
COSN31609624 690 COSMIC
COSN22893578 746 COSMIC
COSN20111360 776 COSMIC
COSN27853352 1030 COSMIC
COSN23035540 1285 COSMIC
COSN24367320 1286 COSMIC
COSN25046259 1313 COSMIC
COSN1169499 1324 COSMIC
COSN27051876 2122 COSMIC
COSN14472630 2251 COSMIC
COSN26451661 2380 COSMIC
rs117932605 1063 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs749760388 5 dbSNP
rs771427432 8 dbSNP
rs370993803 10 dbSNP
rs906950382 11 dbSNP
rs1268244953 13 dbSNP
rs1162460877 14 dbSNP
rs549891331 15 dbSNP
rs769002003 15 dbSNP
rs772529255 15 dbSNP
rs1438085627 18 dbSNP
rs745993473 19 dbSNP
rs1393206770 23 dbSNP
rs1170745347 25 dbSNP
rs1406792016 25 dbSNP
rs776431844 29 dbSNP
rs772247632 31 dbSNP
rs777057259 32 dbSNP
rs775922743 33 dbSNP
rs1322507388 34 dbSNP
rs1342779777 34 dbSNP
rs1191757890 35 dbSNP
rs761879305 35 dbSNP
rs760939421 36 dbSNP
rs1038792931 37 dbSNP
rs1233630320 39 dbSNP
rs768351034 42 dbSNP
rs776423576 43 dbSNP
rs199921625 46 dbSNP
rs1464691004 58 dbSNP
rs574862246 60 dbSNP
rs1031895570 61 dbSNP
rs567853632 62 dbSNP
rs1348420174 68 dbSNP
rs1021514759 70 dbSNP
rs1397004105 71 dbSNP
rs892062239 76 dbSNP
rs1298299362 86 dbSNP
rs1443906406 92 dbSNP
rs1352468296 94 dbSNP
rs999529051 97 dbSNP
rs1329304682 110 dbSNP
rs1375968357 112 dbSNP
rs1435739106 117 dbSNP
rs560060368 118 dbSNP
rs1172347326 119 dbSNP
rs1454256088 123 dbSNP
rs527480746 123 dbSNP
rs1408783624 124 dbSNP
rs1024882179 130 dbSNP
rs377272140 131 dbSNP
rs183827420 135 dbSNP
rs966025241 137 dbSNP
rs1232143965 138 dbSNP
rs1282248610 142 dbSNP
rs1208610013 147 dbSNP
rs1311592002 147 dbSNP
rs1251516887 153 dbSNP
rs531335760 156 dbSNP
rs1370645603 157 dbSNP
rs980182732 162 dbSNP
rs997514784 168 dbSNP
rs1017030198 169 dbSNP
rs1415736642 172 dbSNP
rs1200841105 173 dbSNP
rs1377622296 173 dbSNP
rs962668112 176 dbSNP
rs972740309 179 dbSNP
rs189248274 185 dbSNP
rs1346383566 187 dbSNP
rs1191876844 190 dbSNP
rs142569402 192 dbSNP
rs953516213 199 dbSNP
rs1198493263 200 dbSNP
rs1407469218 201 dbSNP
rs532155171 202 dbSNP
rs929194888 203 dbSNP
rs761664232 205 dbSNP
rs765220330 206 dbSNP
rs146897503 209 dbSNP
rs1038726174 211 dbSNP
rs928257043 213 dbSNP
rs567216819 232 dbSNP
rs1314645250 239 dbSNP
rs1266982836 241 dbSNP
rs1233503227 243 dbSNP
rs193101432 245 dbSNP
rs757882388 252 dbSNP
rs891491507 253 dbSNP
rs111534784 259 dbSNP
rs1332703044 260 dbSNP
rs1024602192 291 dbSNP
rs1291169029 293 dbSNP
rs182651306 294 dbSNP
rs537922483 297 dbSNP
rs1001709040 298 dbSNP
rs1463205400 318 dbSNP
rs556252454 320 dbSNP
rs556770979 322 dbSNP
rs1423046891 324 dbSNP
rs1017000514 325 dbSNP
rs577572787 339 dbSNP
rs972864922 360 dbSNP
rs1188166986 367 dbSNP
rs1317644607 367 dbSNP
rs1484882358 367 dbSNP
rs1246870107 371 dbSNP
rs1244458138 376 dbSNP
rs200183197 376 dbSNP
rs901825529 376 dbSNP
rs545049118 377 dbSNP
rs553643123 380 dbSNP
rs554143361 380 dbSNP
rs1223007430 383 dbSNP
rs1267740225 384 dbSNP
rs1487582919 387 dbSNP
rs1177590721 388 dbSNP
rs1365186600 388 dbSNP
rs574229930 388 dbSNP
rs774027805 388 dbSNP
rs1209242370 389 dbSNP
rs1264181007 391 dbSNP
rs1029020139 392 dbSNP
rs1172344679 392 dbSNP
rs74057123 392 dbSNP
rs953485429 392 dbSNP
rs1489373155 395 dbSNP
rs1247347404 396 dbSNP
rs3742647 396 dbSNP
rs57222312 397 dbSNP
rs987791493 398 dbSNP
rs79036859 399 dbSNP
rs773812801 400 dbSNP
rs911821718 405 dbSNP
rs943177821 410 dbSNP
rs778011635 416 dbSNP
rs1253441022 419 dbSNP
rs1006388458 432 dbSNP
rs1341997016 435 dbSNP
rs1016879714 440 dbSNP
rs1236535206 443 dbSNP
rs1368834278 452 dbSNP
rs1323027484 454 dbSNP
rs974566649 454 dbSNP
rs1288893419 458 dbSNP
rs1392169843 463 dbSNP
rs576202460 468 dbSNP
rs935740948 474 dbSNP
rs1427594806 475 dbSNP
rs1389431645 476 dbSNP
rs1397793918 479 dbSNP
rs972686047 479 dbSNP
rs572408669 482 dbSNP
rs928890207 483 dbSNP
rs991182551 493 dbSNP
rs891454587 496 dbSNP
rs1482951317 500 dbSNP
rs1281542205 504 dbSNP
rs757421799 514 dbSNP
rs1346413771 521 dbSNP
rs949751740 521 dbSNP
rs1274334112 523 dbSNP
rs1239868231 527 dbSNP
rs1229240051 531 dbSNP
rs1337699209 531 dbSNP
rs1315437732 535 dbSNP
rs4901920 545 dbSNP
rs947157070 547 dbSNP
rs187646378 549 dbSNP
rs934527849 550 dbSNP
rs906124959 569 dbSNP
rs1286887361 570 dbSNP
rs1470215188 571 dbSNP
rs1365140833 572 dbSNP
rs901125210 574 dbSNP
rs1472087384 576 dbSNP
rs1489301324 577 dbSNP
rs1190602787 578 dbSNP
rs1214800736 580 dbSNP
rs1278554382 583 dbSNP
rs1262739173 584 dbSNP
rs933302972 584 dbSNP
rs1266363643 586 dbSNP
rs1483457988 590 dbSNP
rs1227997030 593 dbSNP
rs1050427088 598 dbSNP
rs1001678010 602 dbSNP
rs878984397 609 dbSNP
rs1027385609 612 dbSNP
rs1016354005 615 dbSNP
rs749598338 616 dbSNP
rs1305796357 620 dbSNP
rs1401259167 627 dbSNP
rs1156391062 634 dbSNP
rs1386465552 634 dbSNP
rs897965323 637 dbSNP
rs191564201 638 dbSNP
rs1418130902 639 dbSNP
rs898693943 653 dbSNP
rs1417303488 655 dbSNP
rs1157743678 656 dbSNP
rs1331347611 657 dbSNP
rs1359307833 659 dbSNP
rs1449226672 661 dbSNP
rs993693859 667 dbSNP
rs1304904034 668 dbSNP
rs140616059 673 dbSNP
rs542983519 673 dbSNP
rs1377398814 674 dbSNP
rs879412530 679 dbSNP
rs991144820 679 dbSNP
rs1283430781 688 dbSNP
rs1431369944 692 dbSNP
rs1310618623 694 dbSNP
rs1356032866 695 dbSNP
rs748809271 700 dbSNP
rs143886796 701 dbSNP
rs1317877428 705 dbSNP
rs1433732526 706 dbSNP
rs1025766386 712 dbSNP
rs1285596919 719 dbSNP
rs955522894 723 dbSNP
rs1403290467 738 dbSNP
rs1312944382 739 dbSNP
rs1008241970 740 dbSNP
rs978894840 744 dbSNP
rs1388870680 745 dbSNP
rs1187946232 747 dbSNP
rs758134411 749 dbSNP
rs532141222 753 dbSNP
rs1255002100 768 dbSNP
rs1219617929 769 dbSNP
rs3842328 769 dbSNP
rs397841776 769 dbSNP
rs1288872163 770 dbSNP
rs1214945920 774 dbSNP
rs79466889 776 dbSNP
rs934474211 776 dbSNP
rs964582209 785 dbSNP
rs1294829588 792 dbSNP
rs922518735 792 dbSNP
rs1254068625 800 dbSNP
rs1329892003 804 dbSNP
rs150391620 805 dbSNP
rs1179240701 807 dbSNP
rs1369200785 808 dbSNP
rs1168470781 811 dbSNP
rs1239928480 815 dbSNP
rs1437278613 820 dbSNP
rs1189612433 823 dbSNP
rs1477783006 825 dbSNP
rs1204899171 826 dbSNP
rs148610261 827 dbSNP
rs1483931891 830 dbSNP
rs1049642071 831 dbSNP
rs1204326298 833 dbSNP
rs1348580886 834 dbSNP
rs1302763882 835 dbSNP
rs1216976765 836 dbSNP
rs1366405435 836 dbSNP
rs1279800302 841 dbSNP
rs1411315433 843 dbSNP
rs1177403842 844 dbSNP
rs1348988255 847 dbSNP
rs1307869283 848 dbSNP
rs1435877785 849 dbSNP
rs370995237 853 dbSNP
rs1173970969 855 dbSNP
rs1414000661 856 dbSNP
rs1425454203 856 dbSNP
rs1179137580 860 dbSNP
rs1415865129 861 dbSNP
rs1249336682 862 dbSNP
rs1181273729 863 dbSNP
rs1485921259 869 dbSNP
rs925783009 878 dbSNP
rs1207362315 880 dbSNP
rs1173494673 884 dbSNP
rs1311067491 885 dbSNP
rs1357848760 885 dbSNP
rs144161497 893 dbSNP
rs1250902357 894 dbSNP
rs1348314050 894 dbSNP
rs1210061172 895 dbSNP
rs1228240164 895 dbSNP
rs1234241348 895 dbSNP
rs1267125132 895 dbSNP
rs1311091504 895 dbSNP
rs1322565129 895 dbSNP
rs1323848958 895 dbSNP
rs1326571593 895 dbSNP
rs1363360041 895 dbSNP
rs1381913165 895 dbSNP
rs1388124310 895 dbSNP
rs1433009888 895 dbSNP
rs72238797 895 dbSNP
rs878859623 895 dbSNP
rs957269017 895 dbSNP
rs988930498 896 dbSNP
rs1332637353 897 dbSNP
rs1379687659 898 dbSNP
rs1444684507 899 dbSNP
rs1308573723 900 dbSNP
rs1459681384 912 dbSNP
rs912985912 916 dbSNP
rs1368356562 919 dbSNP
rs1369961132 919 dbSNP
rs1390723572 920 dbSNP
rs949720470 920 dbSNP
rs1045418974 921 dbSNP
rs1276750910 923 dbSNP
rs1463187178 923 dbSNP
rs1311456416 924 dbSNP
rs1489291906 925 dbSNP
rs889078645 928 dbSNP
rs1057445959 929 dbSNP
rs1244526129 931 dbSNP
rs1264048577 931 dbSNP
rs1308543089 932 dbSNP
rs1198965850 935 dbSNP
rs1491015276 939 dbSNP
rs375186099 940 dbSNP
rs1259927569 942 dbSNP
rs942060157 943 dbSNP
rs1038163106 951 dbSNP
rs897939525 957 dbSNP
rs1291514980 960 dbSNP
rs1457236972 962 dbSNP
rs1371043717 971 dbSNP
rs1197490170 980 dbSNP
rs184094119 990 dbSNP
rs937562824 996 dbSNP
rs1478719786 999 dbSNP
rs1389000695 1000 dbSNP
rs952350355 1001 dbSNP
rs1038666704 1002 dbSNP
rs1264846648 1003 dbSNP
rs898661427 1004 dbSNP
rs1209570762 1006 dbSNP
rs895994599 1011 dbSNP
rs994349077 1015 dbSNP
rs1203609265 1021 dbSNP
rs1342154295 1034 dbSNP
rs1281042874 1036 dbSNP
rs1235527037 1041 dbSNP
rs1329511711 1045 dbSNP
rs757770953 1051 dbSNP
rs188867818 1053 dbSNP
rs1480322741 1055 dbSNP
rs1309686741 1057 dbSNP
rs1171776320 1060 dbSNP
rs117932605 1063 dbSNP
rs528500977 1065 dbSNP
rs976549114 1077 dbSNP
rs45476291 1079 dbSNP
rs1375535856 1080 dbSNP
rs762333545 1080 dbSNP
rs1472745016 1091 dbSNP
rs1018218306 1097 dbSNP
rs985322801 1104 dbSNP
rs909812936 1112 dbSNP
rs1279977793 1114 dbSNP
rs1202206901 1121 dbSNP
rs1438696642 1134 dbSNP
rs1342920261 1141 dbSNP
rs1255537368 1150 dbSNP
rs1240011389 1152 dbSNP
rs772243719 1155 dbSNP
rs942013408 1167 dbSNP
rs1219030729 1173 dbSNP
rs567722415 1192 dbSNP
rs538055874 1197 dbSNP
rs919334274 1198 dbSNP
rs929340140 1209 dbSNP
rs1397760520 1212 dbSNP
rs1171552380 1213 dbSNP
rs1399412333 1213 dbSNP
rs1457381218 1228 dbSNP
rs1218004318 1231 dbSNP
rs1057239416 1232 dbSNP
rs895963530 1236 dbSNP
rs1452842545 1238 dbSNP
rs1218668899 1240 dbSNP
rs1245796129 1253 dbSNP
rs1488391051 1255 dbSNP
rs1255556390 1256 dbSNP
rs28530645 1260 dbSNP
rs1426294248 1265 dbSNP
rs571450619 1271 dbSNP
rs1226308087 1272 dbSNP
rs1266498681 1272 dbSNP
rs1477038553 1274 dbSNP
rs1167913112 1277 dbSNP
rs1246889573 1278 dbSNP
rs1284622946 1278 dbSNP
rs149022406 1284 dbSNP
rs1005384331 1285 dbSNP
rs1332863268 1285 dbSNP
rs1435215449 1285 dbSNP
rs1165430160 1286 dbSNP
rs1189247436 1286 dbSNP
rs1211428241 1286 dbSNP
rs1246312010 1286 dbSNP
rs1249970726 1286 dbSNP
rs1290237411 1286 dbSNP
rs1314329772 1286 dbSNP
rs1318085657 1286 dbSNP
rs1368415243 1286 dbSNP
rs1414961151 1286 dbSNP
rs1452472460 1286 dbSNP
rs1466335608 1286 dbSNP
rs1468114581 1286 dbSNP
rs1472059042 1286 dbSNP
rs398025271 1286 dbSNP
rs762319877 1286 dbSNP
rs764549187 1286 dbSNP
rs770604295 1286 dbSNP
rs1415072874 1287 dbSNP
rs1407164728 1288 dbSNP
rs1321614822 1291 dbSNP
rs1365216113 1293 dbSNP
rs868210521 1294 dbSNP
rs988672735 1295 dbSNP
rs1300267750 1296 dbSNP
rs1325878674 1299 dbSNP
rs1403978695 1304 dbSNP
rs1390600743 1305 dbSNP
rs79124757 1305 dbSNP
rs1338241985 1306 dbSNP
rs1429685864 1307 dbSNP
rs1388391749 1312 dbSNP
rs1433954633 1312 dbSNP
rs1451935360 1312 dbSNP
rs764124108 1312 dbSNP
rs1188007947 1313 dbSNP
rs1284725724 1314 dbSNP
rs1358320521 1315 dbSNP
rs912946725 1318 dbSNP
rs1226150772 1319 dbSNP
rs1200681113 1320 dbSNP
rs1290453579 1323 dbSNP
rs369682842 1324 dbSNP
rs373124223 1328 dbSNP
rs1260585359 1331 dbSNP
rs1487513972 1332 dbSNP
rs1192849069 1333 dbSNP
rs1238576421 1334 dbSNP
rs1474034262 1335 dbSNP
rs1213493403 1337 dbSNP
rs971151556 1337 dbSNP
rs1161940793 1344 dbSNP
rs1367810915 1348 dbSNP
rs1384752568 1353 dbSNP
rs981215379 1355 dbSNP
rs1345253199 1356 dbSNP
rs1160690631 1360 dbSNP
rs1432092462 1361 dbSNP
rs1369255136 1366 dbSNP
rs78026133 1370 dbSNP
rs904795091 1375 dbSNP
rs1334521540 1377 dbSNP
rs1427400973 1377 dbSNP
rs1000264934 1381 dbSNP
rs775669195 1390 dbSNP
rs1267911914 1393 dbSNP
rs1182636848 1403 dbSNP
rs1483962895 1406 dbSNP
rs1038592471 1412 dbSNP
rs1445797313 1414 dbSNP
rs1249560626 1417 dbSNP
rs1314274882 1422 dbSNP
rs538633906 1423 dbSNP
rs1312233766 1455 dbSNP
rs1031368706 1460 dbSNP
rs920188934 1461 dbSNP
rs1377084498 1464 dbSNP
rs780545187 1468 dbSNP
rs1289309398 1471 dbSNP
rs1412088986 1473 dbSNP
rs1349126978 1475 dbSNP
rs997853043 1479 dbSNP
rs553779788 1482 dbSNP
rs1241596666 1483 dbSNP
rs930112051 1484 dbSNP
rs1360951813 1491 dbSNP
rs1174129756 1494 dbSNP
rs1414054653 1507 dbSNP
rs1412992467 1513 dbSNP
rs1159567035 1517 dbSNP
rs1283454427 1520 dbSNP
rs1409539792 1522 dbSNP
rs1176532251 1526 dbSNP
rs1483572387 1528 dbSNP
rs1349439953 1532 dbSNP
rs1204945932 1538 dbSNP
rs1207426223 1545 dbSNP
rs371440790 1550 dbSNP
rs1460560551 1561 dbSNP
rs572427633 1563 dbSNP
rs1047210295 1567 dbSNP
rs1268401728 1574 dbSNP
rs1229893384 1577 dbSNP
rs192251683 1582 dbSNP
rs891318562 1590 dbSNP
rs541110168 1596 dbSNP
rs1029387604 1605 dbSNP
rs576110003 1607 dbSNP
rs1301105906 1610 dbSNP
rs1444464287 1610 dbSNP
rs1186137433 1611 dbSNP
rs1243005031 1612 dbSNP
rs899807399 1621 dbSNP
rs1322775062 1626 dbSNP
rs1455893199 1632 dbSNP
rs185536352 1634 dbSNP
rs1032858969 1640 dbSNP
rs149587665 1647 dbSNP
rs1453372336 1654 dbSNP
rs145077206 1661 dbSNP
rs962698569 1662 dbSNP
rs1443444826 1663 dbSNP
rs919225073 1671 dbSNP
rs553905065 1673 dbSNP
rs929310447 1675 dbSNP
rs115977789 1676 dbSNP
rs1260438834 1677 dbSNP
rs559056903 1678 dbSNP
rs1323978850 1689 dbSNP
rs1336006507 1700 dbSNP
rs971670634 1706 dbSNP
rs948845298 1714 dbSNP
rs1400867625 1722 dbSNP
rs981185577 1736 dbSNP
rs1034102586 1737 dbSNP
rs747253960 1739 dbSNP
rs1288017450 1740 dbSNP
rs1334628448 1741 dbSNP
rs958325227 1751 dbSNP
rs1351443007 1755 dbSNP
rs1161571131 1756 dbSNP
rs1276248599 1759 dbSNP
rs116853914 1762 dbSNP
rs1202106769 1765 dbSNP
rs1390248696 1766 dbSNP
rs919609568 1767 dbSNP
rs1426307869 1769 dbSNP
rs1260665156 1779 dbSNP
rs1263089172 1782 dbSNP
rs1489647478 1789 dbSNP
rs1053784092 1791 dbSNP
rs776359410 1792 dbSNP
rs1222320988 1794 dbSNP
rs1201041937 1796 dbSNP
rs930231611 1796 dbSNP
rs574062572 1799 dbSNP
rs891440534 1799 dbSNP
rs1326048122 1801 dbSNP
rs1302200877 1804 dbSNP
rs1388767762 1816 dbSNP
rs983474775 1817 dbSNP
rs912729512 1820 dbSNP
rs953820462 1823 dbSNP
rs944213966 1824 dbSNP
rs1039731309 1827 dbSNP
rs1199931221 1831 dbSNP
rs1371153401 1838 dbSNP
rs1379519307 1839 dbSNP
rs1006676751 1846 dbSNP
rs899942905 1854 dbSNP
rs1460060982 1856 dbSNP
rs1372030132 1860 dbSNP
rs561675332 1861 dbSNP
rs1176270940 1874 dbSNP
rs936649972 1877 dbSNP
rs1053694411 1880 dbSNP
rs1434554449 1886 dbSNP
rs1267127146 1891 dbSNP
rs1476926200 1894 dbSNP
rs892489021 1896 dbSNP
rs1175382551 1902 dbSNP
rs531782227 1905 dbSNP
rs1467153966 1908 dbSNP
rs1329193622 1916 dbSNP
rs1203678716 1919 dbSNP
rs549998861 1922 dbSNP
rs1338776204 1923 dbSNP
rs1256680555 1928 dbSNP
rs1010145309 1932 dbSNP
rs1310734687 1933 dbSNP
rs1281128120 1936 dbSNP
rs571388189 1941 dbSNP
rs1350997648 1953 dbSNP
rs374325499 1956 dbSNP
rs1389626528 1962 dbSNP
rs1395069254 1968 dbSNP
rs1002715094 1969 dbSNP
rs1034076510 1971 dbSNP
rs1386783658 1973 dbSNP
rs1426834473 1983 dbSNP
rs1176128244 1990 dbSNP
rs1473102511 1995 dbSNP
rs972652571 2003 dbSNP
rs1325134268 2011 dbSNP
rs1328951734 2012 dbSNP
rs1222102620 2021 dbSNP
rs958426738 2027 dbSNP
rs1256951165 2037 dbSNP
rs918512818 2043 dbSNP
rs1262796161 2044 dbSNP
rs1460133242 2044 dbSNP
rs34373219 2045 dbSNP
rs868259106 2061 dbSNP
rs973847977 2064 dbSNP
rs1329538817 2066 dbSNP
rs1289996007 2067 dbSNP
rs992850241 2071 dbSNP
rs759303642 2072 dbSNP
rs1335166027 2079 dbSNP
rs1312785276 2082 dbSNP
rs1397315610 2085 dbSNP
rs547886466 2089 dbSNP
rs15087 2090 dbSNP
rs1457457144 2092 dbSNP
rs1391210174 2094 dbSNP
rs951159341 2109 dbSNP
rs536654002 2112 dbSNP
rs912811752 2113 dbSNP
rs1210446990 2118 dbSNP
rs944179372 2120 dbSNP
rs554563894 2121 dbSNP
rs1189672035 2131 dbSNP
rs1442814941 2136 dbSNP
rs1242632050 2151 dbSNP
rs1209532040 2153 dbSNP
rs1466424334 2155 dbSNP
rs921458624 2168 dbSNP
rs1198926846 2169 dbSNP
rs1349836974 2171 dbSNP
rs1284671871 2174 dbSNP
rs1424127731 2177 dbSNP
rs936746768 2177 dbSNP
rs190439817 2179 dbSNP
rs537226091 2185 dbSNP
rs1313745593 2189 dbSNP
rs926104949 2202 dbSNP
rs1366988727 2210 dbSNP
rs1478671310 2214 dbSNP
rs141777515 2226 dbSNP
rs1168454465 2227 dbSNP
rs1400533300 2229 dbSNP
rs1391941485 2232 dbSNP
rs1372375670 2233 dbSNP
rs1457992799 2237 dbSNP
rs1384610898 2238 dbSNP
rs200661270 2238 dbSNP
rs370426049 2238 dbSNP
rs869095386 2238 dbSNP
rs936187472 2239 dbSNP
rs574289809 2240 dbSNP
rs1053347274 2244 dbSNP
rs543255596 2244 dbSNP
rs892078744 2245 dbSNP
rs1404006180 2246 dbSNP
rs1298420137 2247 dbSNP
rs1357279928 2247 dbSNP
rs1341598103 2248 dbSNP
rs202200377 2249 dbSNP
rs933640576 2249 dbSNP
rs1268005628 2250 dbSNP
rs767630604 2250 dbSNP
rs879318913 2250 dbSNP
rs1331982264 2251 dbSNP
rs1403630634 2251 dbSNP
rs1952320 2251 dbSNP
rs33914773 2251 dbSNP
rs398025272 2251 dbSNP
rs1365566765 2252 dbSNP
rs6573253 2252 dbSNP
rs1431745147 2253 dbSNP
rs201372738 2261 dbSNP
rs1294075601 2263 dbSNP
rs558814209 2270 dbSNP
rs1478483552 2278 dbSNP
rs1247066204 2282 dbSNP
rs889525314 2283 dbSNP
rs11848423 2290 dbSNP
rs1307377617 2300 dbSNP
rs1489833630 2300 dbSNP
rs182190226 2301 dbSNP
rs1205824578 2308 dbSNP
rs1308696411 2317 dbSNP
rs773171439 2321 dbSNP
rs1245653453 2325 dbSNP
rs1270289275 2325 dbSNP
rs1345360225 2330 dbSNP
rs1267340332 2332 dbSNP
rs11540528 2333 dbSNP
rs1357338812 2333 dbSNP
rs1222099092 2334 dbSNP
rs1055622884 2351 dbSNP
rs1345397097 2353 dbSNP
rs1309120997 2355 dbSNP
rs184353341 2362 dbSNP
rs765897306 2367 dbSNP
rs995251333 2370 dbSNP
rs1184511366 2372 dbSNP
rs1415245409 2388 dbSNP
rs898299383 2390 dbSNP
rs1260998734 2395 dbSNP
rs1424372944 2397 dbSNP
rs1178288610 2401 dbSNP
rs1479310696 2404 dbSNP
rs1027151164 2420 dbSNP
rs1481577811 2421 dbSNP
rs1230672593 2423 dbSNP
rs751014768 2423 dbSNP
rs1423451123 2430 dbSNP
rs994435949 2431 dbSNP
rs1201417521 2433 dbSNP
rs1323206942 2434 dbSNP
rs1025538965 2438 dbSNP
rs754627995 2445 dbSNP
rs1225971718 2448 dbSNP
rs960650579 2448 dbSNP
rs992819186 2448 dbSNP
rs1024276266 2452 dbSNP
rs1004297022 2454 dbSNP
rs1019838042 2455 dbSNP
rs965584122 2460 dbSNP
rs1469493888 2462 dbSNP
rs775369998 2462 dbSNP
rs970050658 2462 dbSNP
rs980189122 2462 dbSNP
rs553038988 2463 dbSNP
rs921427363 2468 dbSNP
rs1405759884 2471 dbSNP
rs1176091025 2474 dbSNP
rs1472815560 2474 dbSNP
rs1244464958 2476 dbSNP
rs1181306000 2477 dbSNP
rs574302201 2483 dbSNP
rs1460651950 2484 dbSNP
rs1269151239 2487 dbSNP
rs989541352 2488 dbSNP
rs1287446242 2492 dbSNP
rs541853570 2493 dbSNP
rs913484322 2493 dbSNP
rs374914348 2494 dbSNP
rs1051294629 2495 dbSNP
rs796591488 2495 dbSNP
rs889425121 2500 dbSNP
rs942373593 2502 dbSNP
rs1452184695 2503 dbSNP
rs1038109835 2510 dbSNP
rs1245249140 2511 dbSNP
rs767193060 2517 dbSNP
rs1289205842 2520 dbSNP
rs1287040940 2521 dbSNP
rs898259915 2522 dbSNP
rs1158220726 2535 dbSNP
rs1046811133 2537 dbSNP
rs146249982 2539 dbSNP
rs1483447260 2546 dbSNP
rs1183599464 2547 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ucggUCGGUUGAG--UGUC---ACGUCu 5'
              | ::::|||  | ||   || || 
Target 5' agagACUUGGCUCAAAAAGGCUUGGAGa 3'
4 - 31
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000395125.1 | 3UTR | GAUAGAGACUUGGCUCAAAAAGGCUUGGAGAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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