pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CHORDC1   
Synonyms CHP1
Description cysteine and histidine rich domain containing 1
Transcript NM_001144073   
Other Transcripts NM_012124   
Expression
Putative miRNA Targets on CHORDC1
3'UTR of CHORDC1
(miRNA target sites are highlighted)
>CHORDC1|NM_001144073|3'UTR
   1 GTGGGAGATGGAAGGAAGGCTATTACATTATTTCCGAATTTTTAATACTGTGTGAAGTGGTGGCTTGCTGCTGTAATCTT
  81 TTGTTTTGTTGTTGTGTTACTGAATGTGGCATTTCAGGGTTAACATTAGGTTCTTAAAAGCCAAAGTCAGTTTGTCTTTT
 161 TGTGCCTCTCATCTTTCTTTTGTGTTATGTAAGATTGATTATTCATTTCTCCCTACTGGTAGGAACCATAGTTGTGTCCT
 241 ATACTTGAAGAGGCTGGAAAGTAGCCCATAACCATAATTGCAGTATTTCTTTGTATTTCTCTGTTAAGCAAAGAAATATT
 321 AAGGAACATTTTTTTTATGTTTTTGTATTATTCCATAATTAGTAAAGCAAGATGAAATGTCAAATTTTAATCAGTTTTTT
 401 CATGGATTTGTGTTCTTACAGTACTTGAAAATATTTAAGGAAGAGATGAAGCTCTGCAGTTTTTTCTATGTGGGATGATT
 481 ACTTTTTTAAGGAGGATTAATTCTGAGGTAGTATAGTAACTAAAGGGGAATATATGAATTGTTTAACAAATTAGAATTTG
 561 TTTACAACTACTTGAATTTTTAAATTATGTCAAAACTTACATTACTTGCCAAGCAGTATGATGTTATAGGAAACATAAAT
 641 AAGATTACAGAGGTATCAATTTGGTTAAAATTCACCATTTTATAAGACTAAGCAATAATCTTAACAACCTCTTTCCTGAA
 721 TATTTAAATGTGTTTGTATGGTGTTATGACTAATTGTTACTGATTTAGAGACTAAGCCCTCTTAAAACCTTTAGTTAAAT
 801 ATAAAAAGAAATTATATATATCTTGCCTCCCTGATGGAAAACTATATAAAATTGTAGACTTAAAAGGTTTGTGGAAATAC
 881 ATTAGGATATCAGAAAACTAAATATATGGAGTTGCTTTATGACTATTACATGTTAAATAAAAATAGCTTAATTGTTTTGG
 961 AGTTTTTTTTTAAAGTCATGAAGAGCTTCACAATTCTAGTGATACAATGTTGACTATATATTGTACTTTATATTAAATAT
1041 AGGTAATACAGAATTAGATCGTTTGGATAGGTTTTGAGTTAGTGCAGAACTCAAGAAGAAAAATTAGGAAATATTCTGAA
1121 GGCCAGAACTCTGGAAGAACTTAGAAAGTTTGGGAATAAATTAAACTTATGTAGATTTAAAATTAAAAGGGGTTTATTTC
1201 CCAAACCCCTTGAGTCTTTTCTTTTCCTTGGTATTTATGGAATTCTTACAAAGAAAAATTTGCAGAAGTACTATTTTCGT
1281 GAATAAAACATATGTATCATTCTACTACCATTAGCAAATAACTTAGTTGTAGTTAATATAATTGTTAAAAGGTTTAGCTC
1361 TGTTACAAATAAAAACATAAAGATCTGGCAACCAGACTTTCATGATGTTACATTACCATGACAAGAAACTCTGGGCAGTA
1441 AAAGTTGGACCCACATGGAGTACATAAGCATCTGATACCTGGAGATGTATTTAAAATTTTTCAAGTTATCTTCCATGATT
1521 TAGGAACCATTTAGAGACATGAAGTCTTTATGGGTTGGGGGAAAGGTTGATAATTAGTTTGATTAAAGGTAATGATTAAT
1601 ATCCCTTTTTGTTCATACTTCCTTCTGAGGCTGTTTTCCCCTAAACAGTATCTTAATCTGTTACATGTAATTGAAATATT
1681 ATTTGAAGCAGTGAGTTATTGTAACCTCAGATTAGTTACATTGATCAAAACATTGATTTATACACACACACACACACATA
1761 CATATGTAGCTTTTATATTTAGTCTGGTTACATTAGTGACCATGGTATTTACTTTCTTCTTAAGGAGCCTTTGAATTTCT
1841 TGTCCAGATAAAAATCCGAATATTTCTCTTAGACTCATACATAAAGGGACACAGTTATCGTTAGGTAGCATATGTTTTAC
1921 TATCGGTTTGTCAAAAAAGTTAATAAAAAGTGCTTATTGATTTATTTCTCTAGAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugACGUCGGAAC-UGGAGGGUc 5'
            ||:  ::||| :||||:|| 
Target 5' ttTGTCTTTTTGTGCCTCTCAt 3'
151 - 172 139.00 -14.00
2
miRNA  3' ugacgucGGAACUGGAGGGuc 5'
                 :|||| ||||||  
Target 5' atatataTCTTG-CCTCCCtg 3'
814 - 833 133.00 -17.50
3
miRNA  3' ugacgucggAACUGGAGGGUc 5'
                   || |::||||| 
Target 5' taaaaggggTTTATTTCCCAa 3'
1184 - 1204 120.00 -11.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30524332 18 COSMIC
COSN30504360 21 COSMIC
COSN26970678 24 COSMIC
COSN30170543 35 COSMIC
COSN13357050 36 COSMIC
COSN30182520 50 COSMIC
COSN31586974 57 COSMIC
COSN30129345 78 COSMIC
COSN31581872 79 COSMIC
COSN30169922 115 COSMIC
COSN7290979 182 COSMIC
COSN24303950 217 COSMIC
COSN31569425 256 COSMIC
COSN32056481 328 COSMIC
COSN26574903 337 COSMIC
COSN21813055 564 COSMIC
COSN26465905 705 COSMIC
COSN1548867 809 COSMIC
COSN25846100 844 COSMIC
COSN20507478 916 COSMIC
COSN31568007 981 COSMIC
COSN32065382 1191 COSMIC
COSN23629316 1235 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs375524609 2 dbSNP
rs1450217245 11 dbSNP
rs1234039753 12 dbSNP
rs778151548 14 dbSNP
rs1311634019 15 dbSNP
rs1447728672 16 dbSNP
rs1346180272 17 dbSNP
rs772495528 18 dbSNP
rs748580673 19 dbSNP
rs369857741 24 dbSNP
rs1165009874 26 dbSNP
rs1298310428 26 dbSNP
rs755561682 27 dbSNP
rs943277755 30 dbSNP
rs911845184 31 dbSNP
rs780821994 34 dbSNP
rs374297329 35 dbSNP
rs1211319143 36 dbSNP
rs986818755 37 dbSNP
rs1243638112 43 dbSNP
rs1218145244 48 dbSNP
rs751156735 49 dbSNP
rs375458529 50 dbSNP
rs1392584549 54 dbSNP
rs1422516929 56 dbSNP
rs1164543033 64 dbSNP
rs1369454116 67 dbSNP
rs549006188 67 dbSNP
rs1459737874 73 dbSNP
rs1318859572 83 dbSNP
rs1292518937 86 dbSNP
rs749394182 89 dbSNP
rs746177244 91 dbSNP
rs1204510950 93 dbSNP
rs1435923200 104 dbSNP
rs955519683 105 dbSNP
rs1367303599 108 dbSNP
rs1226489315 113 dbSNP
rs775748220 115 dbSNP
rs1340217390 123 dbSNP
rs112836856 131 dbSNP
rs1246715945 154 dbSNP
rs1265923270 160 dbSNP
rs528882702 161 dbSNP
rs1446956638 162 dbSNP
rs1277005063 164 dbSNP
rs973200031 166 dbSNP
rs1249289961 170 dbSNP
rs371904791 174 dbSNP
rs1181826697 176 dbSNP
rs769959005 182 dbSNP
rs1393273001 186 dbSNP
rs1323526946 188 dbSNP
rs1367278931 192 dbSNP
rs1157322684 193 dbSNP
rs1411512342 194 dbSNP
rs746752801 210 dbSNP
rs1017097478 213 dbSNP
rs777741702 214 dbSNP
rs1447347441 215 dbSNP
rs368474747 218 dbSNP
rs1302263215 221 dbSNP
rs1379793617 228 dbSNP
rs1012454407 238 dbSNP
rs565430481 241 dbSNP
rs1328089576 267 dbSNP
rs566420386 271 dbSNP
rs1228677319 289 dbSNP
rs1035231011 305 dbSNP
rs1309994983 307 dbSNP
rs758346804 319 dbSNP
rs185568478 328 dbSNP
rs1042072745 329 dbSNP
rs1484486691 329 dbSNP
rs533029640 336 dbSNP
rs1011053050 337 dbSNP
rs1184663789 337 dbSNP
rs1459206224 337 dbSNP
rs1371911570 339 dbSNP
rs1176814287 344 dbSNP
rs1359681447 345 dbSNP
rs1436464680 345 dbSNP
rs1305983325 353 dbSNP
rs1349688884 357 dbSNP
rs1168815229 360 dbSNP
rs1280984338 364 dbSNP
rs1364979036 373 dbSNP
rs893584826 392 dbSNP
rs943246384 410 dbSNP
rs1203697909 413 dbSNP
rs564695569 415 dbSNP
rs193302183 417 dbSNP
rs911729030 423 dbSNP
rs532984137 435 dbSNP
rs1184768760 443 dbSNP
rs531272197 453 dbSNP
rs929254684 455 dbSNP
rs918561927 461 dbSNP
rs562241762 466 dbSNP
rs1250985449 468 dbSNP
rs189439328 469 dbSNP
rs1369856497 470 dbSNP
rs1482104411 470 dbSNP
rs962775443 488 dbSNP
rs1430177877 489 dbSNP
rs1254104529 493 dbSNP
rs573166301 494 dbSNP
rs1435245243 499 dbSNP
rs1311828755 503 dbSNP
rs1276873381 509 dbSNP
rs1221279872 515 dbSNP
rs1275052023 518 dbSNP
rs1225540738 528 dbSNP
rs1372592019 528 dbSNP
rs1324798331 548 dbSNP
rs1288235729 550 dbSNP
rs1297588047 552 dbSNP
rs1343426954 556 dbSNP
rs1408588205 560 dbSNP
rs1197936219 567 dbSNP
rs1158203130 574 dbSNP
rs1288125370 578 dbSNP
rs1451277169 580 dbSNP
rs1222653427 584 dbSNP
rs1248665378 591 dbSNP
rs1351746740 596 dbSNP
rs1389484700 600 dbSNP
rs559667363 600 dbSNP
rs1169447641 604 dbSNP
rs1411416739 606 dbSNP
rs959491448 610 dbSNP
rs1035207775 613 dbSNP
rs545916313 616 dbSNP
rs778777609 624 dbSNP
rs1004179667 626 dbSNP
rs770836651 627 dbSNP
rs754509293 629 dbSNP
rs1282924207 640 dbSNP
rs1356167458 643 dbSNP
rs550288912 643 dbSNP
rs1414797372 645 dbSNP
rs1411027480 646 dbSNP
rs1275293611 650 dbSNP
rs1208220444 659 dbSNP
rs34769715 663 dbSNP
rs1156804110 675 dbSNP
rs967009430 676 dbSNP
rs184672857 681 dbSNP
rs1010606453 688 dbSNP
rs1177864655 701 dbSNP
rs753333473 707 dbSNP
rs1235940496 709 dbSNP
rs557569208 711 dbSNP
rs1419580301 720 dbSNP
rs1455283703 727 dbSNP
rs1017269400 730 dbSNP
rs1388800116 735 dbSNP
rs1383386843 737 dbSNP
rs1212558825 747 dbSNP
rs1340328484 750 dbSNP
rs1462028603 754 dbSNP
rs1295456597 755 dbSNP
rs537643989 766 dbSNP
rs1267918647 780 dbSNP
rs1327366951 788 dbSNP
rs1228068015 789 dbSNP
rs1268969074 790 dbSNP
rs1353018470 801 dbSNP
rs1198790686 808 dbSNP
rs1276435027 812 dbSNP
rs1188433354 815 dbSNP
rs1259298491 817 dbSNP
rs1227025096 820 dbSNP
rs1007272092 825 dbSNP
rs1331857381 827 dbSNP
rs1454902808 837 dbSNP
rs890261222 846 dbSNP
rs1051625280 849 dbSNP
rs192079718 865 dbSNP
rs1349061837 877 dbSNP
rs1409595050 877 dbSNP
rs1289284056 887 dbSNP
rs1337697749 892 dbSNP
rs1376393417 894 dbSNP
rs897772572 898 dbSNP
rs187225159 905 dbSNP
rs1452948732 911 dbSNP
rs941300235 913 dbSNP
rs535705113 916 dbSNP
rs1387591132 919 dbSNP
rs1318295938 922 dbSNP
rs1458692215 925 dbSNP
rs1345698923 930 dbSNP
rs1164076494 932 dbSNP
rs183098985 940 dbSNP
rs1376622775 942 dbSNP
rs1411780687 942 dbSNP
rs990871669 943 dbSNP
rs1176152909 944 dbSNP
rs1445502805 962 dbSNP
rs546597041 963 dbSNP
rs539574048 970 dbSNP
rs938094871 971 dbSNP
rs1300824146 972 dbSNP
rs1331798280 972 dbSNP
rs1385260464 972 dbSNP
rs1236585557 975 dbSNP
rs1247733641 975 dbSNP
rs928102941 978 dbSNP
rs1339890103 979 dbSNP
rs982330503 988 dbSNP
rs1251621532 992 dbSNP
rs1481479493 993 dbSNP
rs1466582294 1001 dbSNP
rs1261796534 1012 dbSNP
rs967355494 1016 dbSNP
rs1021247913 1022 dbSNP
rs570552796 1022 dbSNP
rs773261026 1039 dbSNP
rs1319356354 1043 dbSNP
rs3834437 1049 dbSNP
rs397840939 1049 dbSNP
rs1246166879 1051 dbSNP
rs371199562 1061 dbSNP
rs1295017427 1064 dbSNP
rs192320274 1091 dbSNP
rs1456687830 1092 dbSNP
rs1293229430 1104 dbSNP
rs1391712273 1104 dbSNP
rs1362445018 1140 dbSNP
rs1318572189 1143 dbSNP
rs1292846533 1145 dbSNP
rs1434340072 1150 dbSNP
rs767879241 1157 dbSNP
rs1007242789 1158 dbSNP
rs762220011 1159 dbSNP
rs1242321416 1160 dbSNP
rs1030568612 1170 dbSNP
rs1215056864 1170 dbSNP
rs752101425 1176 dbSNP
rs551242768 1177 dbSNP
rs1464034368 1184 dbSNP
rs561512283 1198 dbSNP
rs1389779628 1208 dbSNP
rs1264479539 1210 dbSNP
rs1422500256 1219 dbSNP
rs1186955696 1237 dbSNP
rs1164434765 1247 dbSNP
rs1418882977 1249 dbSNP
rs1463163582 1250 dbSNP
rs993380758 1254 dbSNP
rs1430643496 1259 dbSNP
rs1431564194 1263 dbSNP
rs1289433437 1266 dbSNP
rs188042057 1273 dbSNP
rs1191087467 1278 dbSNP
rs540049400 1279 dbSNP
rs1266631089 1283 dbSNP
rs1037588288 1288 dbSNP
rs1234803966 1290 dbSNP
rs1327952481 1292 dbSNP
rs1215871878 1293 dbSNP
rs1263035444 1294 dbSNP
rs1340932497 1294 dbSNP
rs1482537316 1295 dbSNP
rs1181659230 1319 dbSNP
rs1258712036 1322 dbSNP
rs1476371761 1342 dbSNP
rs1180372639 1343 dbSNP
rs562269092 1345 dbSNP
rs1401371506 1350 dbSNP
rs1230226094 1380 dbSNP
rs1346927372 1382 dbSNP
rs1464441121 1390 dbSNP
rs10741326 1391 dbSNP
rs1416389467 1392 dbSNP
rs1055153656 1396 dbSNP
rs770101539 1397 dbSNP
rs1308452164 1400 dbSNP
rs1309908959 1401 dbSNP
rs528756528 1412 dbSNP
rs1281660122 1420 dbSNP
rs1486890808 1421 dbSNP
rs1203383016 1424 dbSNP
rs1251365006 1426 dbSNP
rs1179050426 1428 dbSNP
rs982686104 1428 dbSNP
rs559517464 1430 dbSNP
rs1423214907 1432 dbSNP
rs1432639355 1445 dbSNP
rs879390858 1451 dbSNP
rs1370081467 1454 dbSNP
rs781526191 1464 dbSNP
rs61903698 1469 dbSNP
rs1166891547 1472 dbSNP
rs1305886251 1474 dbSNP
rs914064444 1477 dbSNP
rs989662964 1479 dbSNP
rs80082534 1481 dbSNP
rs576967814 1482 dbSNP
rs747031066 1487 dbSNP
rs1232908627 1492 dbSNP
rs563441023 1509 dbSNP
rs985790580 1515 dbSNP
rs543468671 1528 dbSNP
rs1271681859 1529 dbSNP
rs1274308391 1531 dbSNP
rs1438731023 1534 dbSNP
rs954605418 1549 dbSNP
rs575362401 1554 dbSNP
rs1249013628 1562 dbSNP
rs1488232278 1563 dbSNP
rs1194280780 1566 dbSNP
rs1395621353 1570 dbSNP
rs1455492972 1581 dbSNP
rs1166612045 1588 dbSNP
rs993659149 1594 dbSNP
rs116906195 1600 dbSNP
rs1172158214 1601 dbSNP
rs1347694020 1602 dbSNP
rs1439526272 1604 dbSNP
rs1255112391 1611 dbSNP
rs1230787576 1614 dbSNP
rs1313777854 1615 dbSNP
rs1283821616 1617 dbSNP
rs1227728876 1618 dbSNP
rs1325946132 1620 dbSNP
rs771981971 1622 dbSNP
rs1433589949 1633 dbSNP
rs1270096316 1639 dbSNP
rs1340586995 1648 dbSNP
rs1016121174 1650 dbSNP
rs1006124442 1651 dbSNP
rs1334361346 1661 dbSNP
rs4753261 1663 dbSNP
rs1255011044 1671 dbSNP
rs573075296 1681 dbSNP
rs1186664887 1683 dbSNP
rs182535804 1693 dbSNP
rs1475625710 1696 dbSNP
rs149177479 1699 dbSNP
rs1192005328 1706 dbSNP
rs1464833966 1709 dbSNP
rs1165169853 1711 dbSNP
rs570414680 1713 dbSNP
rs1396085710 1719 dbSNP
rs1431967234 1720 dbSNP
rs1318313829 1721 dbSNP
rs945466821 1728 dbSNP
rs1433335363 1733 dbSNP
rs1282750606 1740 dbSNP
rs1355195299 1741 dbSNP
rs1234171696 1744 dbSNP
rs151282456 1749 dbSNP
rs191022336 1751 dbSNP
rs1177723739 1754 dbSNP
rs71472293 1758 dbSNP
rs1204569958 1759 dbSNP
rs1327231194 1759 dbSNP
rs1447470496 1759 dbSNP
rs1491444783 1759 dbSNP
rs34095734 1759 dbSNP
rs398045391 1759 dbSNP
rs750012825 1759 dbSNP
rs1188300051 1761 dbSNP
rs750879258 1762 dbSNP
rs1053906480 1763 dbSNP
rs1409044396 1763 dbSNP
rs1183373285 1765 dbSNP
rs1437973568 1766 dbSNP
rs1255009270 1767 dbSNP
rs936913313 1782 dbSNP
rs910841211 1787 dbSNP
rs778882421 1792 dbSNP
rs954367995 1793 dbSNP
rs1415781546 1794 dbSNP
rs1295355724 1797 dbSNP
rs1207955765 1802 dbSNP
rs1327008914 1805 dbSNP
rs1280170882 1807 dbSNP
rs1352892907 1813 dbSNP
rs370728461 1815 dbSNP
rs1278083564 1816 dbSNP
rs922941003 1823 dbSNP
rs550705028 1825 dbSNP
rs971814201 1828 dbSNP
rs370305180 1834 dbSNP
rs1312254427 1841 dbSNP
rs1016091670 1848 dbSNP
rs142982606 1855 dbSNP
rs1394938188 1857 dbSNP
rs537115335 1858 dbSNP
rs1457123438 1862 dbSNP
rs1034230076 1876 dbSNP
rs1391080376 1886 dbSNP
rs1329764827 1896 dbSNP
rs1387085979 1897 dbSNP
rs1003211964 1898 dbSNP
rs906506066 1899 dbSNP
rs1301162635 1900 dbSNP
rs1346985998 1906 dbSNP
rs1367404899 1909 dbSNP
rs11018908 1910 dbSNP
rs1479515609 1912 dbSNP
rs1446083209 1922 dbSNP
rs1009638232 1924 dbSNP
rs1439050634 1925 dbSNP
rs1207859228 1926 dbSNP
rs1191147253 1927 dbSNP
rs1252947411 1939 dbSNP
rs1455055050 1939 dbSNP
rs1176044000 1951 dbSNP
rs548743830 1953 dbSNP
rs115562269 1955 dbSNP
rs1168778610 1959 dbSNP
rs1398820874 1963 dbSNP
rs11018907 1964 dbSNP
rs200140763 1964 dbSNP
rs936882382 1970 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugACGUCGGAACUGGAGgguc 5'
            | | ||||  :||||    
Target 5' ucUCCUGCCUCAGCCUC---- 3'
9 - 25
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000334660.5 | 3UTR | UAAGUGAUUCUCCUGCCUCAGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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