pre-miRNA Information
pre-miRNA hsa-mir-4301   
Genomic Coordinates chr11: 113450023 - 113450088
Description Homo sapiens miR-4301 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4301
Sequence 11| UCCCACUACUUCACUUGUGA |30
Evidence Experimental
Experiments SOLiD
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs184176277 2 dbSNP
rs1191324913 13 dbSNP
rs1369198005 15 dbSNP
rs1036973189 16 dbSNP
rs944900541 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CELSR3   
Synonyms ADGRC3, CDHF11, EGFL1, FMI1, HFMI1, MEGF2, RESDA1
Description cadherin EGF LAG seven-pass G-type receptor 3
Transcript NM_001407   
Expression
Putative miRNA Targets on CELSR3
3'UTR of CELSR3
(miRNA target sites are highlighted)
>CELSR3|NM_001407|3'UTR
   1 GGGGATGACGGCGTGGACGAGGAACAGCTGAGGGCGACAGAGGATCTAGGCTAACAGGAGAGACTCCAGGAGTGGGGGCA
  81 GATCCCAAGGCAGCCTCCTGCTCCCCAGTGGTGGGTGCCCCAGCTCTACCTGGTGTGGCAGGGCTGAGGCTCCATGTGCA
 161 TCTGTGAGCATGCGTGTGACAGGTGCAGAGACGGGGGACTGGAGGGAGACTTTTATACGTTTTGTACCTTTGTAACCAGA
 241 GAGATGCTTATGTTATTTTTCAGCTTTTCTGTCTCCTGGGGGGTTTGAGGCTGGGCTGGGAGGGGGAGGGAGATAGAGGG
 321 AGAGATGCAGTTTGACCCCATTTGGGTCCTGAGCAAACCCTATGCTCATCTCTCTCTCCTTCCTGGGGTGGACTCAGATG
 401 GGTGGGACACATGCCTTCCTCCCCCTATTCCACCCCCAAGTTGATCTGAGTATCGTCAGGGGCCCAAAGTACAGAATTGT
 481 TCTTTGCTTTTTATTGAATGCTCCAAAGGCCAAACTTCTGGGGCTGGGGGTTGGTCTTGGAAACAGGGGTCCTCTGACTT
 561 CCTCATGGGGGCTTGCTCATACCGCCCCTCCTGGTGGATGTGTGTGTTTATTATGTGGAGTCCCTGCCACTTACTGCCTT
 641 ATGACCTAGGACTGATGCTGTGGGGTGCTGGTGGAGCAGCTGATGTCGTGTTTACAGAGCAAGGCTTCCCTGTCTCCCAC
 721 GGGGAGGGGCTCGGGCCTCTAGTCAGACATTCCTGCAGAGGGTCGGTGGAGGGGTCATTCACCTGCCCCTGCAGCAAGCA
 801 AAAGTTGTCTGTGGTGCCATTTGATTCCCTGACACTGCCCCCTGCTTGAATTGATTCCGAAGGGTAGGGTGGGAAGGTGA
 881 GCAAAGGGAGCAGAAACAAGGGAATTCAAGACCCAGAATGTAGGTGCCACTGCCTCCTATGTTTACAGGATCCTCCGTGG
 961 CCCTAGGCACCTGGGCTGCAGGAAGTGACTCCGTTCCACTCCTCCTTTATTCCCTTAAAAAGGGAAAAATGACTGTTACG
1041 ACCCTGTTCACAAAACTCTTACTTTTGCTATTTTGTCTGCTGTCCAGAACTGAAGACTTTAAAATTTTGTTACTGTTTAC
1121 AAGTCCAGATTCAAAAAATGTTTTTACTTTGTTTACAACTCAAAACTTTGAGTTTTACACTTTGTTTACAGTAGATAATT
1201 TTTTTTCCTTTGTTTCCAAGTGAAAGGTAGGGAAAGTGGGAGAGGGACTTGGAGGACCCACCTGTGAGGACCCTGACCTG
1281 GCCATCTTGAGGGGTTTTCTAACCCCCAGGTCTCCCAGGCCGAAGGTCAGCCTTGAGTCCCGTTTAACAGCAGATCCAGA
1361 AGACCTTGAGAGTAGGCGTCCTCTAACCACGGGGGAGAGTGGCTGTGCAGGGCTGGGGGGTGGTCTGTGCAGACACCTCC
1441 TCACCCACCACCCCATGCATACTCTTGGGAAGCAGCTTCCTGGGAGATTAGAAATTCTACTTCCCTGACTGGAGCTAAAT
1521 CCCACCAGCCAGGACCCAAACTCTCCTTACCGAGAAGGACCCCAGCTCTTGAAGGGCTGAGTGGCCTGCTGGGGGTGGGA
1601 GGGTGTCTTTACTATGTCCTAGGTTTCGTAGATGCCCCTCTCTGGGGTTCCCCTCCTCCAGCCCAGCGGCCCTCTTTCCT
1681 GTCTGTGTAAATTGTTCCGTGAAGCCGCGCTCTGTTTTGGGAATAAACTTCTATAGAAAACAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aguguucacuUCAUCACCCu 5'
                    |||:||||| 
Target 5' cctgctccccAGTGGTGGGt 3'
97 - 116 134.00 -14.10
2
miRNA  3' agUGUUCACU------UCAUCACCCu 5'
            |||:| ||      || |||||| 
Target 5' taACAGGAGAGACTCCAGGAGTGGGg 3'
52 - 77 128.00 -15.70
3
miRNA  3' aguguUCACUUCAUCACCCu 5'
               || |||  |||||| 
Target 5' aaggtAGGGAA--AGTGGGa 3'
1224 - 1241 126.00 -14.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30473482 1 COSMIC
COSN30173262 18 COSMIC
COSN30134390 19 COSMIC
COSN31589947 35 COSMIC
COSN30662591 122 COSMIC
COSN30730344 152 COSMIC
COSN30710461 173 COSMIC
COSN30542863 228 COSMIC
COSN229052 247 COSMIC
COSN31558936 248 COSMIC
COSN30174667 316 COSMIC
COSN7762737 353 COSMIC
COSN24720566 354 COSMIC
COSN1951516 520 COSMIC
COSN31597392 687 COSMIC
COSN26565292 700 COSMIC
COSN29468596 756 COSMIC
COSN1277923 891 COSMIC
COSN23707738 1428 COSMIC
COSN9552837 1512 COSMIC
COSN7699728 1551 COSMIC
COSN17948504 1552 COSMIC
COSN7699727 1699 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs757863136 4 dbSNP
rs1357803109 5 dbSNP
rs1393554816 5 dbSNP
rs200275511 9 dbSNP
rs764653747 10 dbSNP
rs757246976 11 dbSNP
rs753753780 12 dbSNP
rs370155183 13 dbSNP
rs549551361 18 dbSNP
rs775599300 19 dbSNP
rs767710344 26 dbSNP
rs759671919 28 dbSNP
rs1446606657 31 dbSNP
rs1359427340 34 dbSNP
rs147108034 35 dbSNP
rs1376783698 36 dbSNP
rs763284584 36 dbSNP
rs1370340696 38 dbSNP
rs1169555147 39 dbSNP
rs1276489496 54 dbSNP
rs1287224506 55 dbSNP
rs377494941 60 dbSNP
rs761278646 62 dbSNP
rs1014286960 63 dbSNP
rs574163783 64 dbSNP
rs1473170116 70 dbSNP
rs1423770681 74 dbSNP
rs896400097 75 dbSNP
rs925896236 77 dbSNP
rs1385443091 88 dbSNP
rs980112021 90 dbSNP
rs1309247789 94 dbSNP
rs1322264947 101 dbSNP
rs1403871741 103 dbSNP
rs561035136 104 dbSNP
rs567891164 111 dbSNP
rs61045611 117 dbSNP
rs1387805578 118 dbSNP
rs1219536569 123 dbSNP
rs527896685 132 dbSNP
rs560285482 148 dbSNP
rs1158612237 150 dbSNP
rs1203293913 154 dbSNP
rs926448601 155 dbSNP
rs1483423072 156 dbSNP
rs1198844118 170 dbSNP
rs1245465922 171 dbSNP
rs1479303359 173 dbSNP
rs992881586 192 dbSNP
rs1173485836 193 dbSNP
rs1419259211 196 dbSNP
rs1427358950 201 dbSNP
rs551464595 203 dbSNP
rs1038098324 207 dbSNP
rs1370827154 216 dbSNP
rs113862826 218 dbSNP
rs1321035153 219 dbSNP
rs908325432 220 dbSNP
rs1269314374 221 dbSNP
rs1362747162 224 dbSNP
rs1230426867 245 dbSNP
rs759127484 247 dbSNP
rs1209267381 251 dbSNP
rs1432786893 252 dbSNP
rs1453765862 261 dbSNP
rs922824253 266 dbSNP
rs749313611 271 dbSNP
rs1190891564 279 dbSNP
rs1448010316 280 dbSNP
rs1463986038 281 dbSNP
rs1390350392 282 dbSNP
rs1443659543 283 dbSNP
rs1160877557 284 dbSNP
rs114631130 287 dbSNP
rs1201466929 291 dbSNP
rs544328901 302 dbSNP
rs997126294 303 dbSNP
rs1298095725 307 dbSNP
rs1232130529 312 dbSNP
rs542498811 318 dbSNP
rs1244339109 319 dbSNP
rs1282444901 324 dbSNP
rs1358547159 329 dbSNP
rs900138895 338 dbSNP
rs1268028111 339 dbSNP
rs1463952578 341 dbSNP
rs1000396998 342 dbSNP
rs1249037443 344 dbSNP
rs1422815270 357 dbSNP
rs1184940326 360 dbSNP
rs1369902059 361 dbSNP
rs1018620872 362 dbSNP
rs1432633788 363 dbSNP
rs1364112366 365 dbSNP
rs1008561431 374 dbSNP
rs891584616 381 dbSNP
rs1014255824 388 dbSNP
rs1052876336 410 dbSNP
rs1397667467 411 dbSNP
rs895826515 425 dbSNP
rs1056342755 426 dbSNP
rs575106997 427 dbSNP
rs573957894 434 dbSNP
rs1394134674 439 dbSNP
rs904994693 441 dbSNP
rs1044679298 443 dbSNP
rs1342537248 450 dbSNP
rs948676063 452 dbSNP
rs917203622 454 dbSNP
rs992869945 455 dbSNP
rs1287844197 456 dbSNP
rs940080195 457 dbSNP
rs1391010682 462 dbSNP
rs372287637 471 dbSNP
rs762512656 473 dbSNP
rs1448059354 475 dbSNP
rs6809205 479 dbSNP
rs952969093 503 dbSNP
rs1188890752 505 dbSNP
rs1257811358 512 dbSNP
rs542877275 523 dbSNP
rs1442668439 524 dbSNP
rs1180779147 531 dbSNP
rs921456106 534 dbSNP
rs1444605473 540 dbSNP
rs1253527719 545 dbSNP
rs1046808204 559 dbSNP
rs1377068867 562 dbSNP
rs1464335486 564 dbSNP
rs976037031 565 dbSNP
rs572270271 566 dbSNP
rs6773261 574 dbSNP
rs1018562146 575 dbSNP
rs1008551380 583 dbSNP
rs955776376 584 dbSNP
rs1341231252 586 dbSNP
rs1284535288 588 dbSNP
rs1411815115 608 dbSNP
rs1289486845 618 dbSNP
rs975663145 640 dbSNP
rs1231465665 646 dbSNP
rs1258173111 658 dbSNP
rs1345209219 665 dbSNP
rs1450182625 668 dbSNP
rs1204020158 682 dbSNP
rs1249240484 686 dbSNP
rs1182321956 687 dbSNP
rs1031406719 688 dbSNP
rs1431398833 691 dbSNP
rs1200648862 694 dbSNP
rs1332351142 700 dbSNP
rs999964846 711 dbSNP
rs1428931847 713 dbSNP
rs1414250568 717 dbSNP
rs904324811 720 dbSNP
rs376705843 721 dbSNP
rs1298844469 727 dbSNP
rs1367474046 728 dbSNP
rs926248709 733 dbSNP
rs1303789366 736 dbSNP
rs1428022132 742 dbSNP
rs749681452 752 dbSNP
rs1389991033 764 dbSNP
rs1013248563 765 dbSNP
rs967571935 769 dbSNP
rs1205201462 771 dbSNP
rs1264354653 782 dbSNP
rs1487431612 788 dbSNP
rs1211547647 793 dbSNP
rs371459239 799 dbSNP
rs1020344329 804 dbSNP
rs1448610630 806 dbSNP
rs1186493725 818 dbSNP
rs992912667 820 dbSNP
rs1367233685 823 dbSNP
rs1171149434 826 dbSNP
rs367633250 827 dbSNP
rs1187380284 831 dbSNP
rs1483106987 844 dbSNP
rs1253291960 846 dbSNP
rs960004324 859 dbSNP
rs1482509233 864 dbSNP
rs1290397032 867 dbSNP
rs895768847 868 dbSNP
rs1395906640 869 dbSNP
rs1434798499 879 dbSNP
rs1295900810 887 dbSNP
rs1366831081 888 dbSNP
rs1228700728 910 dbSNP
rs577859604 913 dbSNP
rs556200170 917 dbSNP
rs537477262 919 dbSNP
rs1001568676 925 dbSNP
rs905108666 939 dbSNP
rs1353910661 949 dbSNP
rs1464407007 954 dbSNP
rs1206549100 955 dbSNP
rs111747505 956 dbSNP
rs769525406 974 dbSNP
rs1466379479 991 dbSNP
rs1187318567 992 dbSNP
rs567219377 993 dbSNP
rs1351218862 1003 dbSNP
rs1422102311 1007 dbSNP
rs748111121 1018 dbSNP
rs1408288117 1024 dbSNP
rs1457180171 1027 dbSNP
rs1046776533 1039 dbSNP
rs549434727 1039 dbSNP
rs921393691 1040 dbSNP
rs1376575774 1043 dbSNP
rs1407444915 1058 dbSNP
rs1293410476 1063 dbSNP
rs1328313703 1065 dbSNP
rs1226515609 1070 dbSNP
rs1388956578 1086 dbSNP
rs1329599613 1090 dbSNP
rs1163217578 1095 dbSNP
rs1209212625 1101 dbSNP
rs1237097863 1102 dbSNP
rs1482413334 1115 dbSNP
rs1183604199 1118 dbSNP
rs1258329799 1122 dbSNP
rs1472338246 1123 dbSNP
rs1157581699 1125 dbSNP
rs975646450 1130 dbSNP
rs1039758088 1141 dbSNP
rs942419707 1147 dbSNP
rs966004938 1150 dbSNP
rs1179367840 1151 dbSNP
rs1449786949 1151 dbSNP
rs912844565 1153 dbSNP
rs1246928422 1161 dbSNP
rs1223235239 1170 dbSNP
rs1407533626 1170 dbSNP
rs554816276 1172 dbSNP
rs1218380003 1175 dbSNP
rs955680749 1192 dbSNP
rs1031308779 1197 dbSNP
rs1000318600 1198 dbSNP
rs1212495521 1198 dbSNP
rs781145242 1200 dbSNP
rs566733260 1206 dbSNP
rs960096836 1207 dbSNP
rs1023214207 1217 dbSNP
rs1290357905 1225 dbSNP
rs1190910626 1233 dbSNP
rs1423525800 1242 dbSNP
rs1226647153 1246 dbSNP
rs1034480073 1254 dbSNP
rs188918248 1255 dbSNP
rs1427237300 1270 dbSNP
rs1227583659 1272 dbSNP
rs9811378 1275 dbSNP
rs1057050465 1277 dbSNP
rs770255154 1282 dbSNP
rs143282190 1303 dbSNP
rs1017227081 1306 dbSNP
rs778851650 1313 dbSNP
rs886913406 1321 dbSNP
rs1048393934 1322 dbSNP
rs931387771 1325 dbSNP
rs1325619063 1334 dbSNP
rs997996943 1335 dbSNP
rs1203056673 1341 dbSNP
rs921392271 1342 dbSNP
rs1391461513 1348 dbSNP
rs1040261847 1360 dbSNP
rs1438843578 1361 dbSNP
rs1245552164 1362 dbSNP
rs944243602 1377 dbSNP
rs139362931 1378 dbSNP
rs1194713800 1381 dbSNP
rs1399628288 1383 dbSNP
rs1425197188 1391 dbSNP
rs988322207 1393 dbSNP
rs185962846 1394 dbSNP
rs1169873254 1396 dbSNP
rs562066696 1397 dbSNP
rs542949702 1402 dbSNP
rs76178705 1406 dbSNP
rs1388099853 1408 dbSNP
rs1294360158 1409 dbSNP
rs527623185 1410 dbSNP
rs1266172798 1414 dbSNP
rs146528087 1415 dbSNP
rs375958721 1415 dbSNP
rs376324611 1415 dbSNP
rs969277362 1415 dbSNP
rs1319679079 1420 dbSNP
rs878941662 1421 dbSNP
rs1279379340 1424 dbSNP
rs1364641535 1434 dbSNP
rs1272207735 1437 dbSNP
rs1340150446 1444 dbSNP
rs1227853728 1446 dbSNP
rs1022739927 1454 dbSNP
rs1288327551 1455 dbSNP
rs1470241051 1457 dbSNP
rs1214665405 1460 dbSNP
rs1221198928 1461 dbSNP
rs146278097 1475 dbSNP
rs1303215019 1476 dbSNP
rs1194868848 1479 dbSNP
rs545251355 1481 dbSNP
rs181823161 1489 dbSNP
rs538266992 1490 dbSNP
rs1415823767 1491 dbSNP
rs1461896580 1504 dbSNP
rs9848518 1506 dbSNP
rs1319579249 1509 dbSNP
rs1367721145 1514 dbSNP
rs1386167659 1516 dbSNP
rs374086375 1523 dbSNP
rs1437096128 1532 dbSNP
rs1004094944 1541 dbSNP
rs1320498229 1545 dbSNP
rs887064125 1546 dbSNP
rs1027391040 1550 dbSNP
rs1319154285 1558 dbSNP
rs1430515293 1565 dbSNP
rs1447329662 1571 dbSNP
rs995548356 1575 dbSNP
rs899896324 1581 dbSNP
rs1282533997 1592 dbSNP
rs1337502843 1593 dbSNP
rs1234423111 1598 dbSNP
rs1359339762 1599 dbSNP
rs754054694 1608 dbSNP
rs1268120065 1617 dbSNP
rs1327481597 1621 dbSNP
rs1207308211 1622 dbSNP
rs1177819761 1625 dbSNP
rs1039767532 1628 dbSNP
rs944136871 1629 dbSNP
rs891258774 1632 dbSNP
rs1393959859 1639 dbSNP
rs1475283389 1640 dbSNP
rs1168751430 1642 dbSNP
rs1158331644 1650 dbSNP
rs1409718457 1654 dbSNP
rs1458597832 1655 dbSNP
rs1052553353 1657 dbSNP
rs778304875 1658 dbSNP
rs909228221 1661 dbSNP
rs1314681769 1668 dbSNP
rs1357439955 1672 dbSNP
rs1415516042 1675 dbSNP
rs1288242242 1678 dbSNP
rs1185679670 1680 dbSNP
rs1349195056 1686 dbSNP
rs925568397 1698 dbSNP
rs1241572509 1699 dbSNP
rs1261681040 1706 dbSNP
rs1343774851 1706 dbSNP
rs983445912 1707 dbSNP
rs951282633 1708 dbSNP
rs190258717 1721 dbSNP
rs544267785 1728 dbSNP
rs947051812 1731 dbSNP
rs915577966 1732 dbSNP
rs1376872226 1734 dbSNP
rs1018400738 1736 dbSNP
rs1171972443 1739 dbSNP
rs1377548792 1741 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aguguUCACUUCAUCACCCu 5'
               || |||  |||||| 
Target 5' aagguAGGGAA--AGUGGGa 3'
3 - 20
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000164024.4 | 3UTR | GAAAGGUAGGGAAAGUGGGAGAGGGACUUGGAGGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
83 hsa-miR-4301 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT081134 LDLR low density lipoprotein receptor 2 4
MIRT090911 ARHGEF26 Rho guanine nucleotide exchange factor 26 2 2
MIRT229436 MECP2 methyl-CpG binding protein 2 2 2
MIRT274717 CPSF6 cleavage and polyadenylation specific factor 6 2 2
MIRT350957 BACH1 BTB domain and CNC homolog 1 2 2
MIRT386722 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT446022 PEX3 peroxisomal biogenesis factor 3 2 2
MIRT481303 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 14
MIRT483959 ZNF354B zinc finger protein 354B 2 6
MIRT495667 TUBAL3 tubulin alpha like 3 2 2
MIRT496554 TBX15 T-box 15 2 2
MIRT497702 ARL6IP6 ADP ribosylation factor like GTPase 6 interacting protein 6 2 2
MIRT498105 RMND5A required for meiotic nuclear division 5 homolog A 2 2
MIRT512535 SEMA4D semaphorin 4D 2 2
MIRT512556 MFN2 mitofusin 2 2 6
MIRT521465 RABGAP1 RAB GTPase activating protein 1 2 6
MIRT526236 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT526743 HLA-DOB major histocompatibility complex, class II, DO beta 2 2
MIRT527578 BRD7 bromodomain containing 7 2 4
MIRT528038 WT1 Wilms tumor 1 2 2
MIRT528267 GPRIN2 G protein regulated inducer of neurite outgrowth 2 2 2
MIRT528505 HTR7 5-hydroxytryptamine receptor 7 2 4
MIRT528758 RPS27 ribosomal protein S27 2 6
MIRT528999 IPO9 importin 9 2 2
MIRT529701 MRPL30 mitochondrial ribosomal protein L30 2 2
MIRT529781 C17orf82 chromosome 17 open reading frame 82 2 2
MIRT533797 TMEM119 transmembrane protein 119 2 6
MIRT535308 PHF12 PHD finger protein 12 2 2
MIRT535917 MKL2 MKL1/myocardin like 2 2 2
MIRT544892 OSBPL1A oxysterol binding protein like 1A 2 2
MIRT555423 PPIC peptidylprolyl isomerase C 2 2
MIRT562068 KLHL15 kelch like family member 15 2 2
MIRT565623 SLC31A1 solute carrier family 31 member 1 2 2
MIRT565661 SIX1 SIX homeobox 1 2 2
MIRT570138 IL1RL2 interleukin 1 receptor like 2 2 2
MIRT571045 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT621232 LMAN1 lectin, mannose binding 1 2 2
MIRT622272 SH3TC2 SH3 domain and tetratricopeptide repeats 2 2 2
MIRT623844 GAN gigaxonin 2 2
MIRT626158 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626464 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT632087 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT637243 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT642710 FGFR1OP2 FGFR1 oncogene partner 2 2 2
MIRT643611 KANSL3 KAT8 regulatory NSL complex subunit 3 2 2
MIRT644270 PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 2 2
MIRT645470 SPIN3 spindlin family member 3 2 2
MIRT649193 DNPEP aspartyl aminopeptidase 2 2
MIRT650776 POP4 POP4 homolog, ribonuclease P/MRP subunit 2 2
MIRT651345 ZC2HC1C zinc finger C2HC-type containing 1C 2 2
MIRT652237 TRAPPC3L trafficking protein particle complex 3 like 2 2
MIRT652587 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT654591 PURA purine rich element binding protein A 2 2
MIRT654649 PTAFR platelet activating factor receptor 2 2
MIRT656842 KLF7 Kruppel like factor 7 2 2
MIRT657209 IKZF2 IKAROS family zinc finger 2 2 2
MIRT658513 ETV3 ETS variant 3 2 2
MIRT659448 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT668816 CYLD CYLD lysine 63 deubiquitinase 2 2
MIRT669067 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 2
MIRT677711 ELOF1 elongation factor 1 homolog 2 4
MIRT687146 PTPN12 protein tyrosine phosphatase, non-receptor type 12 2 2
MIRT698498 THOC2 THO complex 2 2 2
MIRT707930 PPP1R3D protein phosphatase 1 regulatory subunit 3D 4 2
MIRT708737 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT710031 POLL DNA polymerase lambda 2 2
MIRT712175 STK4 serine/threonine kinase 4 2 2
MIRT715297 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT716892 AGPAT6 glycerol-3-phosphate acyltransferase 4 2 2
MIRT717378 RBM41 RNA binding motif protein 41 2 2
MIRT718082 CLIC5 chloride intracellular channel 5 2 2
MIRT718721 ANKRD18A ankyrin repeat domain 18A 2 2
MIRT719152 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719224 CAMK4 calcium/calmodulin dependent protein kinase IV 2 2
MIRT719528 SRCIN1 SRC kinase signaling inhibitor 1 2 2
MIRT719861 KLF2 Kruppel like factor 2 2 2
MIRT720326 CAMK2G calcium/calmodulin dependent protein kinase II gamma 2 2
MIRT721596 SREBF1 sterol regulatory element binding transcription factor 1 2 2
MIRT722020 NEBL nebulette 2 2
MIRT722484 QSOX1 quiescin sulfhydryl oxidase 1 2 2
MIRT722614 TEAD1 TEA domain transcription factor 1 2 2
MIRT723664 RPTN repetin 2 2
MIRT723939 SVOP SV2 related protein 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4301 Cisplatin 5460033 NSC119875 approved sensitive High Hepatocellular Carcinoma cell line (Hep3B, 97L)
hsa-miR-4301 Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-mir-4301 Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-mir-4301 Paclitaxel 36314 NSC125973 approved sensitive cell line (W1)
hsa-mir-4301 Doxorubicin 31703 NSC123127 approved sensitive cell line (W1)
hsa-mir-4301 Methotrexate 126941 NSC740 approved sensitive cell line (W1)
hsa-mir-4301 Topotecan 60699 NSC609699 approved sensitive cell line (W1)
hsa-miR-4301 Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-4301 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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