pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CCNG1   
Synonyms CCNG
Description cyclin G1
Transcript NM_004060   
Other Transcripts NM_199246   
Expression
Putative miRNA Targets on CCNG1
3'UTR of CCNG1
(miRNA target sites are highlighted)
>CCNG1|NM_004060|3'UTR
   1 CTGGATTATTACAGCACCAAAAAACTTCTCTGAAGCCTTTCTCCACAACCTTGTTCTATGGATTCCATAATGTTACAATG
  81 GATTTAAGCTATGAAGCCTCAAAACATCACGAGATAAGCATGATGGTCTCAGACTTGGGAAAACTGCCTAATATTATGCT
 161 GTAGTGGAATTATGTTTAGATTTGAATTCATCTGTGAAGCATTCAAATCAAAGCTAAAAGCCTAAATGTGAAATGCTAAT
 241 GACAAGCCTGAGAAGGTAAACTGTGAATCTTCATTTCTATCATTGATCTAACTTTAGATATTGGATCAATATATTTAGGT
 321 GGTATTGAAAATGCTATTGGAGGAGTCACACTAATACTATCAACTATCAGTCTTCCCACAGCTTCAATCACTGTCATTAT
 401 TCTAATCCTACTCCTACTTAAATTTTAAGTTATGAGGTTTATGTCAAAAGCAACATTTCACAAATGTACTTTTAAGGCAT
 481 AATAAGGGTTAACATTCTAGGCAGTATAAACACACCCCATAATGCAAGTAATAGGTAATCTAGAGATGTGGACTTTATTG
 561 CTATATGGGAATTACATTTAAATTTGAGGGCATTTTATATAAAGAAAAATACAGACCTATAAAGTTTGGCATATTCATTA
 641 AGTTATCTTTTAATATTTTTTTCTAGAAAACAGGTGACATTTGTATCTACGATAAAAATTTTTATACAGAACCTACTGCC
 721 TCAAACTGAATCCCATCAAGAAAACTAGTTTCTATTGTATTAGTAACTCAAAATAAATTATCACTTCGAAAACTTGCTTT
 801 CCCACACTAAGGTAAGTTCAGACTAGATTGAACACTCCAGAATTTTTTACTACAGACTGTTTTTAAGTTAGAAGTGATGG
 881 CAATTTTATAAATAGAGAATATACTTCCACTGATGCCCTTACTGTGCCAAAACAAAAATCTTAAGAAAAGCAAGTAGACA
 961 CCTTCATAACTATGAATGAAGCTGCTGAAGTAGTGTTTAGGATCCTCCATGGCAGTTAGTGAATGTAAGAAGTACAGTGT
1041 TAAAGTGTTGTAAACAGTTACTCAGTGCAATGTATAGCCTGAGTCTATCCATGATGGCTATATCCAATTTGACATCACGT
1121 TATGGATCAGTACACAATGAAAAACCAAAGAACCACAGTATATCTTATTCTTAACTTTTGTAAACCATGTTTTATGGGTA
1201 ACTTTTTAGTTTTCCCAAAAGGCTGATAAATTTCAATATTTTGAATACATCATTGTTAATTTTGAGTTGGCAGAGGTAAA
1281 CTAACCAACTACCATTATGTTTTAGTACTAAGGGATATACCTTTCAATAAAGTTAATGAAATTCAAAAAAAAAAAAAAAA
1361 AA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucgGUCGGUUGAGUGUCACGUcu 5'
             |||:: |||  |||||||  
Target 5' aaaCAGTT-ACT--CAGTGCAat 3'
1052 - 1071 139.00 -14.10
2
miRNA  3' ucGGU-CGGUUGAGUGUCACGUCu 5'
            |||  |:||  :| ||| ||| 
Target 5' tcCCACACTAAGGTA-AGTTCAGa 3'
800 - 822 120.00 -10.00
3
miRNA  3' ucGGUCGGUUGAGU--GUCACGUCu 5'
            ::||: ||: :|   ||| ||| 
Target 5' agTTAGTGAATGTAAGAAGTACAGt 3'
1014 - 1038 119.00 -12.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN22802298 478 COSMIC
COSN28186572 1091 COSMIC
COSN24404698 1130 COSMIC
COSN2083019 1138 COSMIC
COSN16641068 1279 COSMIC
COSN31579430 1324 COSMIC
COSN31551797 1410 COSMIC
COSN26636791 1439 COSMIC
COSN9931419 1446 COSMIC
COSN31608013 1675 COSMIC
COSN28067905 1768 COSMIC
COSN31528003 1893 COSMIC
COSN31566152 1894 COSMIC
COSN31601089 1914 COSMIC
COSN31566627 2144 COSMIC
COSN31483591 2217 COSMIC
COSN20983069 2379 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1159356788 5 dbSNP
rs1387345244 6 dbSNP
rs866178200 6 dbSNP
rs1017722573 16 dbSNP
rs146472121 17 dbSNP
rs767507276 17 dbSNP
rs1399175673 18 dbSNP
rs773896011 22 dbSNP
rs1230235527 23 dbSNP
rs759171679 25 dbSNP
rs373723183 26 dbSNP
rs1047210367 29 dbSNP
rs1301932098 30 dbSNP
rs1329996791 32 dbSNP
rs1398080415 34 dbSNP
rs752293307 36 dbSNP
rs1261987920 44 dbSNP
rs760459789 47 dbSNP
rs763817081 48 dbSNP
rs1447430671 50 dbSNP
rs1005794435 55 dbSNP
rs1347603243 66 dbSNP
rs982725811 76 dbSNP
rs1023882958 92 dbSNP
rs1419036550 93 dbSNP
rs1170361223 101 dbSNP
rs908427300 105 dbSNP
rs1266039160 106 dbSNP
rs941049572 116 dbSNP
rs1358451901 121 dbSNP
rs1488236843 131 dbSNP
rs1245043566 134 dbSNP
rs1399258038 139 dbSNP
rs2069356 144 dbSNP
rs1341162702 147 dbSNP
rs1216620774 152 dbSNP
rs926402084 155 dbSNP
rs1384015143 163 dbSNP
rs1001124539 166 dbSNP
rs1278836551 174 dbSNP
rs1218557308 182 dbSNP
rs1299341773 184 dbSNP
rs1294707594 195 dbSNP
rs1436790110 199 dbSNP
rs1035330048 209 dbSNP
rs959792189 210 dbSNP
rs988987869 211 dbSNP
rs1020101213 214 dbSNP
rs1426229038 216 dbSNP
rs145304923 218 dbSNP
rs1234317799 220 dbSNP
rs1258080082 221 dbSNP
rs968989904 221 dbSNP
rs1351971572 223 dbSNP
rs1216473848 225 dbSNP
rs978673065 241 dbSNP
rs532214629 247 dbSNP
rs17881803 249 dbSNP
rs1458966863 261 dbSNP
rs1251611520 264 dbSNP
rs1209339428 275 dbSNP
rs942600421 276 dbSNP
rs976726786 284 dbSNP
rs896645983 285 dbSNP
rs922622284 287 dbSNP
rs1219354238 288 dbSNP
rs761146067 288 dbSNP
rs1306714912 289 dbSNP
rs535525236 289 dbSNP
rs567143917 297 dbSNP
rs2069357 300 dbSNP
rs1466010350 302 dbSNP
rs1357885473 311 dbSNP
rs1266136151 312 dbSNP
rs116208158 316 dbSNP
rs1379748023 317 dbSNP
rs1017604697 321 dbSNP
rs1200565360 324 dbSNP
rs1378178614 326 dbSNP
rs1418895641 328 dbSNP
rs1199614304 330 dbSNP
rs900608430 331 dbSNP
rs1159122416 333 dbSNP
rs1211505530 343 dbSNP
rs1362352469 344 dbSNP
rs190782335 363 dbSNP
rs1352417692 364 dbSNP
rs1283190899 369 dbSNP
rs941488637 370 dbSNP
rs1456364748 372 dbSNP
rs1489294167 374 dbSNP
rs538099031 376 dbSNP
rs1308192878 384 dbSNP
rs1395862970 385 dbSNP
rs1045219252 391 dbSNP
rs1291848404 395 dbSNP
rs1305168749 398 dbSNP
rs1435817529 403 dbSNP
rs1359980635 416 dbSNP
rs772230207 425 dbSNP
rs1003767116 428 dbSNP
rs1387504480 443 dbSNP
rs556609351 448 dbSNP
rs955236967 452 dbSNP
rs577723192 456 dbSNP
rs1421907350 465 dbSNP
rs544953545 467 dbSNP
rs2069358 468 dbSNP
rs1260455658 469 dbSNP
rs1009978922 474 dbSNP
rs1375084887 479 dbSNP
rs962587890 483 dbSNP
rs1264536198 484 dbSNP
rs572767045 498 dbSNP
rs1310502509 506 dbSNP
rs1320302940 508 dbSNP
rs1319245711 511 dbSNP
rs540504264 512 dbSNP
rs1415970344 513 dbSNP
rs926287671 516 dbSNP
rs561882065 517 dbSNP
rs991932467 518 dbSNP
rs978556991 520 dbSNP
rs1018133415 521 dbSNP
rs1456530346 528 dbSNP
rs1369984045 530 dbSNP
rs980709155 532 dbSNP
rs1477470288 541 dbSNP
rs1235998676 549 dbSNP
rs917619881 550 dbSNP
rs1178985701 552 dbSNP
rs418358 556 dbSNP
rs386694408 560 dbSNP
rs62394890 561 dbSNP
rs426308 563 dbSNP
rs1317644499 570 dbSNP
rs2069359 572 dbSNP
rs1458495299 573 dbSNP
rs1328064402 578 dbSNP
rs1322897611 579 dbSNP
rs1398340093 581 dbSNP
rs1396905566 585 dbSNP
rs1326806679 600 dbSNP
rs867714446 601 dbSNP
rs11740842 602 dbSNP
rs963939741 603 dbSNP
rs1039094812 606 dbSNP
rs1332441422 608 dbSNP
rs2069360 609 dbSNP
rs1227037694 610 dbSNP
rs1312673777 611 dbSNP
rs551363419 612 dbSNP
rs2069361 616 dbSNP
rs982807560 617 dbSNP
rs1253283012 618 dbSNP
rs1197620586 626 dbSNP
rs527314867 628 dbSNP
rs941463033 630 dbSNP
rs1340628816 632 dbSNP
rs1239704963 636 dbSNP
rs1231225612 639 dbSNP
rs1482173200 639 dbSNP
rs1397850030 640 dbSNP
rs1412668956 640 dbSNP
rs1330589884 641 dbSNP
rs1045184856 642 dbSNP
rs1410483010 644 dbSNP
rs1401468522 647 dbSNP
rs766933142 652 dbSNP
rs2069362 664 dbSNP
rs1177641302 665 dbSNP
rs1414417880 672 dbSNP
rs939589405 673 dbSNP
rs299321 678 dbSNP
rs2069363 679 dbSNP
rs1010278567 680 dbSNP
rs1019955494 692 dbSNP
rs765176854 693 dbSNP
rs1171657579 696 dbSNP
rs999970429 702 dbSNP
rs375134030 703 dbSNP
rs1302679564 704 dbSNP
rs1033981986 705 dbSNP
rs1339649607 705 dbSNP
rs959074325 706 dbSNP
rs571378148 710 dbSNP
rs546294526 711 dbSNP
rs1157489285 713 dbSNP
rs998100616 714 dbSNP
rs992213949 720 dbSNP
rs1275697452 726 dbSNP
rs1316758708 727 dbSNP
rs565891313 729 dbSNP
rs1274709089 733 dbSNP
rs1310126337 735 dbSNP
rs1186049933 738 dbSNP
rs1209127460 742 dbSNP
rs1216042851 743 dbSNP
rs1237910619 745 dbSNP
rs1486604828 746 dbSNP
rs1224528224 747 dbSNP
rs1286689942 747 dbSNP
rs1297482222 747 dbSNP
rs1346454715 747 dbSNP
rs1355961285 747 dbSNP
rs1397640892 747 dbSNP
rs1416579391 747 dbSNP
rs35396845 747 dbSNP
rs1029956891 749 dbSNP
rs77154908 750 dbSNP
rs1477553923 751 dbSNP
rs966437354 755 dbSNP
rs1421882651 757 dbSNP
rs1163160927 758 dbSNP
rs1476376896 759 dbSNP
rs553883852 760 dbSNP
rs983161229 761 dbSNP
rs1193567198 762 dbSNP
rs369945382 764 dbSNP
rs1036406357 765 dbSNP
rs925440318 765 dbSNP
rs909904462 766 dbSNP
rs1287498573 768 dbSNP
rs1234960373 770 dbSNP
rs962748659 772 dbSNP
rs1437055215 773 dbSNP
rs919019217 774 dbSNP
rs980848296 775 dbSNP
rs1216713451 791 dbSNP
rs926784462 796 dbSNP
rs1288898498 797 dbSNP
rs1435329124 798 dbSNP
rs182432020 798 dbSNP
rs542697608 803 dbSNP
rs34378390 808 dbSNP
rs1347805302 818 dbSNP
rs939559596 821 dbSNP
rs1327462273 826 dbSNP
rs1463404994 827 dbSNP
rs1395652446 836 dbSNP
rs1056637495 838 dbSNP
rs1170609911 842 dbSNP
rs936941386 849 dbSNP
rs772982129 855 dbSNP
rs1400061410 859 dbSNP
rs1421781906 864 dbSNP
rs1187134997 870 dbSNP
rs1477728137 879 dbSNP
rs375228155 879 dbSNP
rs2069364 883 dbSNP
rs1215786953 889 dbSNP
rs1468796033 895 dbSNP
rs1365047597 902 dbSNP
rs922152775 912 dbSNP
rs2069365 921 dbSNP
rs144016678 923 dbSNP
rs1041752723 924 dbSNP
rs1305251610 924 dbSNP
rs567560390 928 dbSNP
rs1004918056 929 dbSNP
rs999939017 941 dbSNP
rs1395676495 953 dbSNP
rs1214306997 955 dbSNP
rs1460938778 959 dbSNP
rs1356843760 960 dbSNP
rs1036858345 970 dbSNP
rs1285248944 977 dbSNP
rs1039513267 981 dbSNP
rs1195751839 988 dbSNP
rs1454826496 989 dbSNP
rs1237362638 990 dbSNP
rs17881666 992 dbSNP
rs1193948677 998 dbSNP
rs1481473127 1000 dbSNP
rs1251884495 1005 dbSNP
rs1209317680 1006 dbSNP
rs533200121 1014 dbSNP
rs1345135295 1015 dbSNP
rs995263436 1025 dbSNP
rs997987658 1026 dbSNP
rs2069366 1027 dbSNP
rs1375634149 1030 dbSNP
rs758692122 1039 dbSNP
rs951352955 1041 dbSNP
rs1306602977 1044 dbSNP
rs1390069124 1050 dbSNP
rs1375979883 1052 dbSNP
rs1299304701 1056 dbSNP
rs1273558465 1065 dbSNP
rs2069367 1066 dbSNP
rs1211739643 1069 dbSNP
rs1373718669 1074 dbSNP
rs1266661507 1081 dbSNP
rs576642275 1083 dbSNP
rs1182538343 1087 dbSNP
rs1365641422 1088 dbSNP
rs1435389570 1092 dbSNP
rs1229234086 1094 dbSNP
rs1157186035 1109 dbSNP
rs1471707461 1109 dbSNP
rs1158774005 1110 dbSNP
rs1181212066 1119 dbSNP
rs1395635271 1128 dbSNP
rs760879982 1130 dbSNP
rs867994245 1131 dbSNP
rs962717622 1138 dbSNP
rs980817794 1139 dbSNP
rs1013284298 1142 dbSNP
rs1025044288 1143 dbSNP
rs1352295733 1147 dbSNP
rs1392511481 1150 dbSNP
rs926670034 1154 dbSNP
rs2069368 1156 dbSNP
rs548708771 1160 dbSNP
rs1333527361 1164 dbSNP
rs766545484 1165 dbSNP
rs992706892 1166 dbSNP
rs1336654028 1167 dbSNP
rs1231161046 1173 dbSNP
rs1319123414 1175 dbSNP
rs751747655 1178 dbSNP
rs1437839527 1181 dbSNP
rs1480897631 1182 dbSNP
rs1197510445 1184 dbSNP
rs1235371464 1185 dbSNP
rs914091666 1186 dbSNP
rs766343551 1188 dbSNP
rs191618240 1198 dbSNP
rs1359963149 1203 dbSNP
rs1287347396 1216 dbSNP
rs565093529 1217 dbSNP
rs925608643 1231 dbSNP
rs1474090876 1236 dbSNP
rs935614299 1243 dbSNP
rs1032061398 1250 dbSNP
rs958210827 1251 dbSNP
rs1258990311 1254 dbSNP
rs1206535614 1260 dbSNP
rs1039397240 1261 dbSNP
rs550314620 1263 dbSNP
rs1485969950 1264 dbSNP
rs1261707219 1265 dbSNP
rs571492146 1269 dbSNP
rs899555959 1273 dbSNP
rs997966972 1283 dbSNP
rs1237660922 1285 dbSNP
rs538874609 1289 dbSNP
rs1295712359 1310 dbSNP
rs751080292 1321 dbSNP
rs1354317569 1329 dbSNP
rs547476702 1336 dbSNP
rs987526549 1341 dbSNP
rs1004527203 1345 dbSNP
rs746775628 1358 dbSNP
rs1384157969 1361 dbSNP
rs759039482 1364 dbSNP
rs940659906 1369 dbSNP
rs1459742185 1370 dbSNP
rs1037754610 1379 dbSNP
rs1165583424 1379 dbSNP
rs1477418165 1383 dbSNP
rs1194640585 1385 dbSNP
rs898419201 1386 dbSNP
rs1002125349 1388 dbSNP
rs1253847014 1394 dbSNP
rs767105467 1405 dbSNP
rs1211419178 1406 dbSNP
rs960754561 1410 dbSNP
rs2069369 1415 dbSNP
rs931164033 1418 dbSNP
rs1055356076 1422 dbSNP
rs1250103173 1424 dbSNP
rs1229756775 1429 dbSNP
rs1455781755 1439 dbSNP
rs1303027257 1442 dbSNP
rs1438909957 1443 dbSNP
rs1177156176 1444 dbSNP
rs1326292771 1449 dbSNP
rs1465063467 1462 dbSNP
rs992278729 1463 dbSNP
rs1169570764 1465 dbSNP
rs1462113827 1476 dbSNP
rs766423181 1486 dbSNP
rs1191378404 1488 dbSNP
rs754546531 1493 dbSNP
rs1455268834 1496 dbSNP
rs895087859 1498 dbSNP
rs1194698907 1511 dbSNP
rs1013918775 1525 dbSNP
rs1380137808 1529 dbSNP
rs1470766309 1530 dbSNP
rs1340156756 1539 dbSNP
rs1279622793 1547 dbSNP
rs1160805626 1568 dbSNP
rs1232395466 1571 dbSNP
rs1231832067 1572 dbSNP
rs565847062 1586 dbSNP
rs1021533521 1593 dbSNP
rs1410937208 1599 dbSNP
rs1404266020 1600 dbSNP
rs1441290137 1612 dbSNP
rs2291790 1615 dbSNP
rs980013359 1628 dbSNP
rs1391842333 1639 dbSNP
rs149348306 1640 dbSNP
rs943617302 1662 dbSNP
rs1032106676 1681 dbSNP
rs1444205555 1682 dbSNP
rs1330405788 1688 dbSNP
rs1470005955 1694 dbSNP
rs1377377682 1701 dbSNP
rs1231467619 1706 dbSNP
rs1184616423 1711 dbSNP
rs1438847834 1719 dbSNP
rs756560845 1723 dbSNP
rs957761278 1725 dbSNP
rs1486679435 1726 dbSNP
rs371481198 1732 dbSNP
rs1348295575 1734 dbSNP
rs1282380664 1735 dbSNP
rs376581128 1735 dbSNP
rs1355619120 1737 dbSNP
rs574467199 1743 dbSNP
rs1239722671 1745 dbSNP
rs1273968273 1750 dbSNP
rs1354788431 1750 dbSNP
rs1029570505 1752 dbSNP
rs17883523 1753 dbSNP
rs1237886526 1760 dbSNP
rs1317201429 1761 dbSNP
rs1438783709 1765 dbSNP
rs1050896730 1768 dbSNP
rs1406265449 1772 dbSNP
rs1160613571 1780 dbSNP
rs955015812 1782 dbSNP
rs1236203713 1783 dbSNP
rs1417831781 1784 dbSNP
rs988134922 1796 dbSNP
rs754246739 1797 dbSNP
rs1165003747 1803 dbSNP
rs908093092 1810 dbSNP
rs1419462170 1817 dbSNP
rs537736408 1826 dbSNP
rs886937533 1828 dbSNP
rs757742297 1830 dbSNP
rs973349574 1841 dbSNP
rs1286572652 1844 dbSNP
rs1205552345 1847 dbSNP
rs1463681303 1851 dbSNP
rs1169520265 1852 dbSNP
rs1333871794 1858 dbSNP
rs939829571 1858 dbSNP
rs1396884561 1862 dbSNP
rs920709878 1873 dbSNP
rs1392898381 1881 dbSNP
rs1355555181 1885 dbSNP
rs1269028025 1889 dbSNP
rs188233605 1893 dbSNP
rs898388260 1894 dbSNP
rs1055005899 1912 dbSNP
rs894964538 1913 dbSNP
rs193188036 1918 dbSNP
rs545261408 1921 dbSNP
rs1163422646 1934 dbSNP
rs1476447043 1940 dbSNP
rs1414667875 1946 dbSNP
rs949214090 1948 dbSNP
rs1046747597 1954 dbSNP
rs1244114500 1954 dbSNP
rs1033622254 1956 dbSNP
rs1194163447 1958 dbSNP
rs1467872115 1965 dbSNP
rs902401376 1965 dbSNP
rs1215507751 1978 dbSNP
rs1335347959 1982 dbSNP
rs1315292227 1996 dbSNP
rs185471595 2002 dbSNP
rs1272162753 2007 dbSNP
rs1293927504 2008 dbSNP
rs1337049848 2010 dbSNP
rs1270419245 2021 dbSNP
rs1370751057 2033 dbSNP
rs999220016 2033 dbSNP
rs1216990011 2048 dbSNP
rs896519936 2052 dbSNP
rs1170345176 2053 dbSNP
rs1014085108 2056 dbSNP
rs1189470073 2062 dbSNP
rs1197888481 2067 dbSNP
rs1277031750 2068 dbSNP
rs1442336689 2080 dbSNP
rs1189283718 2082 dbSNP
rs1020999567 2083 dbSNP
rs967204973 2086 dbSNP
rs369896651 2091 dbSNP
rs571921717 2092 dbSNP
rs1028705124 2096 dbSNP
rs1202346757 2110 dbSNP
rs1308766644 2113 dbSNP
rs955046302 2114 dbSNP
rs1233154189 2116 dbSNP
rs560246257 2121 dbSNP
rs1015145022 2123 dbSNP
rs962258420 2127 dbSNP
rs1298109171 2131 dbSNP
rs1368743076 2131 dbSNP
rs1440571257 2150 dbSNP
rs17883275 2154 dbSNP
rs1356375356 2165 dbSNP
rs1463262977 2169 dbSNP
rs1434148884 2173 dbSNP
rs973401967 2174 dbSNP
rs1175739515 2178 dbSNP
rs779450810 2189 dbSNP
rs572046790 2193 dbSNP
rs12657994 2197 dbSNP
rs1406907166 2201 dbSNP
rs1401255218 2207 dbSNP
rs958852779 2217 dbSNP
rs975023210 2222 dbSNP
rs920921860 2224 dbSNP
rs190798116 2225 dbSNP
rs986873915 2228 dbSNP
rs1282101142 2235 dbSNP
rs112172238 2241 dbSNP
rs1313164838 2243 dbSNP
rs923877142 2249 dbSNP
rs1398201802 2259 dbSNP
rs908250717 2260 dbSNP
rs1376214439 2263 dbSNP
rs192535026 2271 dbSNP
rs1373701189 2275 dbSNP
rs756949850 2277 dbSNP
rs1315006621 2284 dbSNP
rs1804633 2290 dbSNP
rs1053481657 2306 dbSNP
rs1327240177 2312 dbSNP
rs565278287 2315 dbSNP
rs1229964311 2327 dbSNP
rs1038144142 2334 dbSNP
rs1420635880 2341 dbSNP
rs893481582 2347 dbSNP
rs898357254 2355 dbSNP
rs1254571653 2358 dbSNP
rs532529210 2359 dbSNP
rs534968287 2375 dbSNP
rs547589899 2381 dbSNP
rs1258934994 2382 dbSNP
rs1200697051 2384 dbSNP
rs1050616118 2391 dbSNP
rs1055006009 2416 dbSNP
rs1212171520 2419 dbSNP
rs896397036 2420 dbSNP
rs1214151788 2436 dbSNP
rs1013554593 2452 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ucGGUCGGUUGAGUGUCACGUCu 5'
            :|| |||:  :: ||||||| 
Target 5' ugUCACCCAGGCUGGAGUGCAGu 3'
11 - 33
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000340828.2 | 3UTR | GGGUCACUCUUGUCACCCAGGCUGGAGUGCAGUGGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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