pre-miRNA Information
pre-miRNA hsa-mir-3689d-1   
Genomic Coordinates chr9: 134849609 - 134849682
Description Homo sapiens miR-3689d-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3689d-2   
Genomic Coordinates chr9: 134850277 - 134850356
Description Homo sapiens miR-3689d-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3689d
Sequence 2| GGGAGGUGUGAUCUCACACUCG |23
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs551722268 8 dbSNP
rs143142996 8 dbSNP
rs1236297052 12 dbSNP
rs573148947 14 dbSNP
rs1210004979 14 dbSNP
rs1217460444 14 dbSNP
rs762590109 18 dbSNP
rs574332265 18 dbSNP
rs1164353021 21 dbSNP
rs963741171 21 dbSNP
rs1177416877 22 dbSNP
rs765777344 22 dbSNP
Putative Targets

Gene Information
Gene Symbol DESI1   
Synonyms D15Wsu75e, DESI2, DJ347H13.4, DeSI-1, FAM152B, PPPDE2
Description desumoylating isopeptidase 1
Transcript NM_015704   
Expression
Putative miRNA Targets on DESI1
3'UTR of DESI1
(miRNA target sites are highlighted)
>DESI1|NM_015704|3'UTR
   1 CAGGACTGCCTGGGACCGCCCTGCCTCACCAGGGCTTTTCCTTTTTAAACAAAACAAACCCTACCAGATTTCTATTTTAT
  81 AATTTTACATCAGAGCTAACAACCAGGGGACGGCTTTTTAAATTTCCCAGGGAAGGAGACCGTCAGGCCGCATGTAGACA
 161 ATGCTGCTAAGAAACAGAACAAAATGCCACCCCTTCTAATAGTATTATACTAATTTATTAAGGCTGTCTTGTCTGTGCGT
 241 TCACTTCGGATGCTGTTTCCTAAGCGTCCTCCACACTGGAGAAAGGGAGGGGCTTTGTTTAAACAGAAAGCGAGTCACAG
 321 TTTGCGGGAGCCCCAACCTAGAACTCTTTCCAGAGAACACTCACGCTCTACCCAAGTTGCCAACACCTGTGGGACCCAGG
 401 TGAGTTTTAGAACATCCGTGACCCAGAAAGTTACTCTAGTGTTAAATGAACCAAAGGATTTGGTGTACATGGGACCGGTT
 481 TCAGGATGACTAACCTAACCTAAGTGAACTCTTTAGCCACAACCCTCACCTTCCCTCCCTTACCCCAAGCAAGGCCAGTG
 561 CTGGAGCAGCCATTGCCTCCGGATCAAGGGAGTAACAGCAAGTATCAGGCCGGAGAAAACAGGATAAAGCCATTCCTCCT
 641 TCCACCTAGATGGATTGCCAATCTTCTGCCATCAATTTTGGGAAACCTGCCTTTGTGCCCCCGAGGCTGCCTTTCCTCAG
 721 CATAGCTGACTTGTCATAGTGGATGAGGTCTGGGCTGGAGCAGTAGAAGCCAAGGCCTTTTTTCTGCAAGTAATGATGTA
 801 GGTTATTTGCAGTCTCTGTAACCACCATCCAGGCCAGTACGCAGTATTTAGCTGGGGACCAAGGGATGGGATTCCCTACT
 881 CTAAGAAAATACCTTTATTTTAATTATTATTATTTTTTGAGACGGAGTCTCGCTCTACCACCCAGGCTGGTGTGCAGTGG
 961 CATGATCTCGGCTCACAGAAACCTCTGCCTCCCGGGTTCAAGTGGTTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTA
1041 CAGGTGCGTGCCACCACGCCAGGCTAATTTTTGTATTTTCAGTAGAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTG
1121 GAACTCCTGACCTCGGGTGATCCACCTCCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCTGCCTGGC
1201 CAGAAAATACCTTTGATATGGAAAGAATAATGATGTGAGGCCTGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGG
1281 GAGGCCGAGGCAGGCAGATCACTTGAGGTCAGGACTTCAAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAA
1361 AAATACAAAATTAGCCGGGCATGGTGGCGCATGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGA
1441 ACCCGGGAGGCAGAGATTGCGATGAGCCGAGATCGTACCAGTGCACTCCAGCCTGGGCGACAGAGTGAGACTCCATCTCA
1521 AAAAAATAAAATAATGAAGTGGAATCAAGGTGGCAAGAAAATTTAGAATCGTTTCTGATAGGGACTTTCCCTTATCCTAA
1601 ATGTGTTTTGAAGGCACACGTTATTTCCATTGTCATTCTGACTTTAGAAAGGCAGGTTGGGGCATGAGTGGGCATTTTCC
1681 TAATGACTTGCTGCTAGGAGGTTATAGGCAGGGAACAGTCTGGGAGTCTCTAATCCAGAGAGACTTTCAGATTCCCTCTC
1761 TTCACATGAACCTCCATTAGTTAGATTTTGGGAAAGTGAGCATGAAGAAGGGACTCAGAGCTGCCAGGTACCCGAGTCTC
1841 AGGTCTGACATCCTTGGGCCCCTTCTGCCACAACTTCTTGCCACTTCACGGACTTGAATTATGTTGCTTCTTCCTGGAAG
1921 TCTGGCCTGCAGCACAGGCCTTTCCTCTCCAAAAAGCTGCTGCTCATTTCTGGCCCCATCTGCTGCTATCTTTGCCATCA
2001 GCCATCACAGTTTGGCATCATCAGAGTCTCAGCTAGAGGAGCTGTCATTCTGCCTTAGTGTTTGCCTGCGACCTGACCAG
2081 GGGCATGACCAGCTGGGATGTCAAGTGACATTTGGGAACTTGTAGAGGCCAAATGATTGAAAGTTTAATTCTTCTCAAGA
2161 CCCACTGATTTGCCAGTGTGCATGGAAATAATAGATTAGAGCAGAAACTAGCAGGGACTGTTGTATAATCGTGATCTACT
2241 AGCAGAATTGGGCCCAAAGAGAAAGAATTTCTGAGGCTGGGTTTCTTCTGGGAGGGTAGCAGGTTGGTCTTGGCCAGTGC
2321 TCTGTTTCCCACCAGTGTTGTTCCCTTTTCCAGCTTGCCTGGCCCGGCTCTGTCTTCCAGGGTCCTGCTCCAGACCCCTC
2401 TGCCTGGGGTCTCCCCTCCATCCAGGGGGTTCTGGGCATCACAGCTCCTTTTTTTCCTTTCTCCTCTTCCAGATCCAGTT
2481 TCAGCTGGTTTGCTTCTTCCAGCAGGCACCCTTAGGCCCAGGAGCAGCTCCCCTGAGAGAATTTGAGTCACTCATTTCCT
2561 TGAACAGCACCCCCCTTTATACTAGCAGCCATTTGTGCCATTGCCTGTGCCCTAGGGTTTGTGGGGAGAGAGCGAGGGAT
2641 CACTGAGCAGTTTTCCCAGAGCTCCATGGGAAGGCAAGCTCTCCCTCCCAATGGGAGCCCCACTGTCACTAACTGTAAAC
2721 TCAGGCTCAGGCTTCAACTGCCTACCCCCATCCTCATATTTCTGTCTGTCCCAGCACCTCAGGAGCATTCTCATTGTGGC
2801 CGGCTAACTCCGCCTGGATGTGAACAGGCAAGCACAGTGGGAAATGAGTCACGTACTTGTATTGCACAGTGGACACCTCT
2881 AGAGGTCCATTGGTTTAAAGGGATAGGGAAGGAGGAGGGATGAGACCATCACCCCCTCCCAGAAGTAAATCTAGTATCTG
2961 AGTTTTCTTTATGCCCTTGAGTCAAACTAATAACTGTCTAGTACGGAGGTGTTTGCTGGTTTTCTTCGGTGTTTTTTCTA
3041 ATGCAATAAACTCATTTCTGCCTGCTGCAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gcucaCACUCUAGUGUGGAGGg 5'
               | | |||| ||||||| 
Target 5' acctcGGGTGATC-CACCTCCc 3'
1130 - 1150 156.00 -25.50
2
miRNA  3' gcucACACUC-UAGUGUGGAGGg 5'
              | ||:| |||||| |||| 
Target 5' gggtTCTGGGCATCACAGCTCCt 3'
2427 - 2449 138.00 -20.90
3
miRNA  3' gcUCACACUCUAGUGUGGAGgg 5'
            || |||||| : ||:|||  
Target 5' acAGAGTGAGACTCCATCTCaa 3'
1500 - 1521 136.00 -17.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26973228 18 COSMIC
COSN31779366 112 COSMIC
COSN22166103 249 COSMIC
COSN16940137 417 COSMIC
COSN21886333 1109 COSMIC
COSN14925779 1620 COSMIC
COSN20717295 1645 COSMIC
COSN30571977 1809 COSMIC
COSN26819795 2014 COSMIC
COSN30665546 2031 COSMIC
COSN21250066 2044 COSMIC
COSN30583490 2139 COSMIC
COSN30729321 2391 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs377733800 1 dbSNP
rs764505539 12 dbSNP
rs1210609047 13 dbSNP
rs756720545 17 dbSNP
rs561475718 18 dbSNP
rs767646881 23 dbSNP
rs1191783083 25 dbSNP
rs759518900 27 dbSNP
rs191281123 29 dbSNP
rs1161482098 32 dbSNP
rs376183352 33 dbSNP
rs1478222064 34 dbSNP
rs1169700162 36 dbSNP
rs766556205 39 dbSNP
rs773008781 40 dbSNP
rs1363329837 41 dbSNP
rs769535492 44 dbSNP
rs72547432 48 dbSNP
rs1041572165 61 dbSNP
rs1044666 72 dbSNP
rs772028256 74 dbSNP
rs1297275140 75 dbSNP
rs781678915 75 dbSNP
rs746029614 78 dbSNP
rs778974163 79 dbSNP
rs1366240005 93 dbSNP
rs757528921 111 dbSNP
rs557714028 112 dbSNP
rs1351318099 119 dbSNP
rs1215607344 128 dbSNP
rs916310436 130 dbSNP
rs1488720541 137 dbSNP
rs1195541569 138 dbSNP
rs72547431 140 dbSNP
rs545369357 141 dbSNP
rs932366591 142 dbSNP
rs1351812627 146 dbSNP
rs1284029069 147 dbSNP
rs868590620 148 dbSNP
rs187174287 149 dbSNP
rs377448041 150 dbSNP
rs1037153029 152 dbSNP
rs978336229 153 dbSNP
rs940060686 154 dbSNP
rs907718809 161 dbSNP
rs966926466 162 dbSNP
rs1385714143 164 dbSNP
rs1337972447 167 dbSNP
rs72547430 176 dbSNP
rs1436566517 193 dbSNP
rs989634320 198 dbSNP
rs1374541219 201 dbSNP
rs182398102 204 dbSNP
rs927235710 205 dbSNP
rs979984721 206 dbSNP
rs757719171 207 dbSNP
rs1315748051 208 dbSNP
rs1352509707 211 dbSNP
rs954286713 223 dbSNP
rs1028323381 228 dbSNP
rs565669500 232 dbSNP
rs1222386029 238 dbSNP
rs1255503038 239 dbSNP
rs1438352674 245 dbSNP
rs965338349 247 dbSNP
rs570376541 248 dbSNP
rs955960386 252 dbSNP
rs554343392 255 dbSNP
rs1019795272 261 dbSNP
rs1005196264 266 dbSNP
rs1386953587 283 dbSNP
rs1184158575 285 dbSNP
rs751442900 300 dbSNP
rs889941092 305 dbSNP
rs1445978600 309 dbSNP
rs1337312439 310 dbSNP
rs1049387710 312 dbSNP
rs1355885037 319 dbSNP
rs994642856 320 dbSNP
rs1050044716 322 dbSNP
rs995751018 325 dbSNP
rs755870014 326 dbSNP
rs144667732 333 dbSNP
rs1056453659 336 dbSNP
rs1472939781 337 dbSNP
rs939038685 340 dbSNP
rs1420852646 364 dbSNP
rs374716055 364 dbSNP
rs1042689594 365 dbSNP
rs1316292880 371 dbSNP
rs1394126597 378 dbSNP
rs1333228842 379 dbSNP
rs1340805461 387 dbSNP
rs945631742 401 dbSNP
rs1415652410 405 dbSNP
rs1295289758 416 dbSNP
rs915471344 418 dbSNP
rs1228360556 419 dbSNP
rs142404348 422 dbSNP
rs914264265 425 dbSNP
rs988855481 430 dbSNP
rs538602596 437 dbSNP
rs921381552 439 dbSNP
rs1255926608 453 dbSNP
rs757814071 454 dbSNP
rs1418892670 462 dbSNP
rs1345347102 466 dbSNP
rs1486168437 469 dbSNP
rs1019399559 476 dbSNP
rs976799802 477 dbSNP
rs1367247201 478 dbSNP
rs1477244881 480 dbSNP
rs954228517 483 dbSNP
rs1028461929 492 dbSNP
rs1464513043 496 dbSNP
rs1171882085 501 dbSNP
rs749997136 508 dbSNP
rs1436282153 509 dbSNP
rs571160251 511 dbSNP
rs1037271984 512 dbSNP
rs1399519729 522 dbSNP
rs546635069 530 dbSNP
rs1004195270 537 dbSNP
rs1328224489 541 dbSNP
rs1231722554 542 dbSNP
rs1255848027 547 dbSNP
rs950696296 552 dbSNP
rs1349130582 557 dbSNP
rs1004644030 562 dbSNP
rs764675636 563 dbSNP
rs1487741531 564 dbSNP
rs995113687 565 dbSNP
rs1361939087 566 dbSNP
rs1263249938 572 dbSNP
rs528164526 580 dbSNP
rs761515965 581 dbSNP
rs1490932991 597 dbSNP
rs561012044 601 dbSNP
rs1455459246 602 dbSNP
rs1293018416 606 dbSNP
rs1359613693 607 dbSNP
rs1003281478 611 dbSNP
rs549576357 612 dbSNP
rs1237916867 613 dbSNP
rs1042092946 619 dbSNP
rs17002508 620 dbSNP
rs894055994 623 dbSNP
rs1372340280 624 dbSNP
rs1054031019 638 dbSNP
rs932850419 639 dbSNP
rs1353381960 642 dbSNP
rs1216084041 645 dbSNP
rs1262057344 649 dbSNP
rs764491249 651 dbSNP
rs1275727453 653 dbSNP
rs566178311 655 dbSNP
rs1455554911 661 dbSNP
rs1176648996 665 dbSNP
rs113566231 674 dbSNP
rs986555269 688 dbSNP
rs563935679 690 dbSNP
rs976862842 691 dbSNP
rs944146553 701 dbSNP
rs1160189201 702 dbSNP
rs775853034 703 dbSNP
rs192118039 705 dbSNP
rs1292986202 706 dbSNP
rs1395264106 722 dbSNP
rs371099167 725 dbSNP
rs547863858 728 dbSNP
rs751923722 736 dbSNP
rs952736204 737 dbSNP
rs1028508026 739 dbSNP
rs974675092 743 dbSNP
rs962890869 748 dbSNP
rs376826837 753 dbSNP
rs137872032 754 dbSNP
rs543520749 755 dbSNP
rs188554951 758 dbSNP
rs1003353450 760 dbSNP
rs571571711 763 dbSNP
rs1196676099 783 dbSNP
rs1410561005 791 dbSNP
rs1480868180 792 dbSNP
rs1428727923 793 dbSNP
rs1178701339 795 dbSNP
rs1252979732 796 dbSNP
rs1174516238 797 dbSNP
rs1422318785 797 dbSNP
rs1164424971 798 dbSNP
rs1418686410 800 dbSNP
rs1463020287 802 dbSNP
rs1169248641 815 dbSNP
rs1354453131 820 dbSNP
rs771034097 822 dbSNP
rs1300298235 827 dbSNP
rs1002265827 829 dbSNP
rs143621039 835 dbSNP
rs183951156 840 dbSNP
rs575120538 841 dbSNP
rs1479870303 844 dbSNP
rs1216235442 845 dbSNP
rs1257396407 845 dbSNP
rs538486663 848 dbSNP
rs371756070 869 dbSNP
rs1254055793 877 dbSNP
rs1205870561 882 dbSNP
rs1317961293 883 dbSNP
rs1187503633 890 dbSNP
rs1053481365 892 dbSNP
rs1476262472 897 dbSNP
rs1191570998 902 dbSNP
rs1418841862 904 dbSNP
rs932920453 912 dbSNP
rs1411034474 915 dbSNP
rs1173092525 919 dbSNP
rs934562016 923 dbSNP
rs758123281 924 dbSNP
rs900073489 931 dbSNP
rs912234225 932 dbSNP
rs549773890 939 dbSNP
rs1301551863 943 dbSNP
rs192443678 951 dbSNP
rs1041200090 953 dbSNP
rs1277058087 962 dbSNP
rs148894219 970 dbSNP
rs1276342852 978 dbSNP
rs973845880 982 dbSNP
rs1211317024 983 dbSNP
rs1486759727 993 dbSNP
rs963236406 994 dbSNP
rs908667746 997 dbSNP
rs1442895851 1005 dbSNP
rs1241607905 1009 dbSNP
rs1475743781 1012 dbSNP
rs1015726362 1013 dbSNP
rs1423664606 1014 dbSNP
rs1334870836 1016 dbSNP
rs1454144064 1020 dbSNP
rs982884431 1021 dbSNP
rs1174619990 1024 dbSNP
rs1470998561 1044 dbSNP
rs1430175412 1047 dbSNP
rs560871927 1048 dbSNP
rs370299269 1050 dbSNP
rs919924945 1057 dbSNP
rs546274965 1058 dbSNP
rs1002192242 1061 dbSNP
rs1351159472 1062 dbSNP
rs1238253422 1080 dbSNP
rs1283820834 1087 dbSNP
rs1447709822 1089 dbSNP
rs905186580 1089 dbSNP
rs1468449749 1090 dbSNP
rs1178260475 1097 dbSNP
rs1397290287 1101 dbSNP
rs1438152304 1102 dbSNP
rs1461311424 1106 dbSNP
rs145577371 1110 dbSNP
rs1408249027 1116 dbSNP
rs1401988242 1126 dbSNP
rs1320980356 1129 dbSNP
rs746859754 1134 dbSNP
rs1033555874 1135 dbSNP
rs981947401 1138 dbSNP
rs1374468597 1141 dbSNP
rs1238045651 1142 dbSNP
rs1279236862 1143 dbSNP
rs1351630077 1144 dbSNP
rs1225639290 1148 dbSNP
rs187111185 1151 dbSNP
rs1334178251 1152 dbSNP
rs892968767 1154 dbSNP
rs1255442161 1159 dbSNP
rs1237923760 1172 dbSNP
rs1456762880 1180 dbSNP
rs1021159474 1181 dbSNP
rs999191516 1190 dbSNP
rs1240778268 1199 dbSNP
rs1470977979 1202 dbSNP
rs1381861920 1211 dbSNP
rs1009297693 1215 dbSNP
rs893519866 1219 dbSNP
rs779831995 1229 dbSNP
rs1167087043 1232 dbSNP
rs549113438 1233 dbSNP
rs996430115 1234 dbSNP
rs1403040876 1244 dbSNP
rs1288479938 1246 dbSNP
rs900103234 1247 dbSNP
rs1041275158 1248 dbSNP
rs1008391465 1249 dbSNP
rs1275653694 1251 dbSNP
rs887265403 1254 dbSNP
rs113989897 1256 dbSNP
rs931426863 1258 dbSNP
rs919982394 1259 dbSNP
rs1185994725 1265 dbSNP
rs1185045716 1270 dbSNP
rs563731222 1272 dbSNP
rs1038533367 1279 dbSNP
rs941078415 1285 dbSNP
rs1256303033 1286 dbSNP
rs552008136 1287 dbSNP
rs1398375602 1294 dbSNP
rs1412543753 1296 dbSNP
rs1484725512 1303 dbSNP
rs776234232 1305 dbSNP
rs533446477 1312 dbSNP
rs1415519983 1314 dbSNP
rs1216994845 1315 dbSNP
rs926559634 1323 dbSNP
rs1324713942 1328 dbSNP
rs527472224 1332 dbSNP
rs1227347043 1337 dbSNP
rs112819224 1342 dbSNP
rs970569479 1347 dbSNP
rs913720612 1349 dbSNP
rs960850345 1350 dbSNP
rs541054229 1352 dbSNP
rs112977632 1366 dbSNP
rs1032474562 1367 dbSNP
rs868563325 1372 dbSNP
rs963680114 1375 dbSNP
rs1427341628 1376 dbSNP
rs1299050005 1377 dbSNP
rs1432998659 1381 dbSNP
rs1374715452 1382 dbSNP
rs113420289 1383 dbSNP
rs1008421192 1388 dbSNP
rs887328748 1389 dbSNP
rs1047244839 1392 dbSNP
rs543515257 1396 dbSNP
rs996038596 1397 dbSNP
rs369043134 1400 dbSNP
rs956790242 1403 dbSNP
rs898587357 1405 dbSNP
rs1055879605 1406 dbSNP
rs937363361 1412 dbSNP
rs928599026 1413 dbSNP
rs1046373028 1414 dbSNP
rs1232685573 1418 dbSNP
rs1303154412 1424 dbSNP
rs1368532763 1433 dbSNP
rs949351957 1434 dbSNP
rs575056243 1435 dbSNP
rs1258582661 1437 dbSNP
rs1485294332 1440 dbSNP
rs988001023 1441 dbSNP
rs1205186370 1442 dbSNP
rs556869631 1444 dbSNP
rs925097401 1445 dbSNP
rs1395474072 1449 dbSNP
rs1455416220 1457 dbSNP
rs1263341799 1458 dbSNP
rs1193972813 1461 dbSNP
rs1178576047 1465 dbSNP
rs1362253869 1466 dbSNP
rs538873065 1469 dbSNP
rs1289550628 1471 dbSNP
rs1289387059 1474 dbSNP
rs963709357 1475 dbSNP
rs1439354359 1476 dbSNP
rs998711743 1484 dbSNP
rs145445958 1490 dbSNP
rs1007825108 1493 dbSNP
rs1304483867 1498 dbSNP
rs1051041087 1499 dbSNP
rs1239271043 1515 dbSNP
rs1262002600 1517 dbSNP
rs996730252 1527 dbSNP
rs3209025 1529 dbSNP
rs951664204 1538 dbSNP
rs1253531975 1541 dbSNP
rs1026280973 1553 dbSNP
rs899497556 1556 dbSNP
rs1469686960 1570 dbSNP
rs1175230817 1571 dbSNP
rs1249502380 1581 dbSNP
rs1279035403 1583 dbSNP
rs1414281557 1589 dbSNP
rs1485970610 1590 dbSNP
rs866577342 1600 dbSNP
rs1395830202 1602 dbSNP
rs1344007490 1604 dbSNP
rs1296840825 1607 dbSNP
rs1372998404 1609 dbSNP
rs756837008 1617 dbSNP
rs1034454450 1619 dbSNP
rs908318240 1627 dbSNP
rs1353083324 1638 dbSNP
rs1047236062 1641 dbSNP
rs553265933 1642 dbSNP
rs189809668 1645 dbSNP
rs939562878 1653 dbSNP
rs1202295702 1663 dbSNP
rs567291980 1668 dbSNP
rs1387712172 1669 dbSNP
rs555453455 1672 dbSNP
rs1001605740 1674 dbSNP
rs907255087 1679 dbSNP
rs1178062064 1686 dbSNP
rs980998824 1696 dbSNP
rs537150858 1701 dbSNP
rs969573463 1703 dbSNP
rs185737378 1705 dbSNP
rs1045765753 1713 dbSNP
rs915247363 1733 dbSNP
rs1425200117 1736 dbSNP
rs989524711 1740 dbSNP
rs946005914 1743 dbSNP
rs1309520529 1748 dbSNP
rs1373205755 1764 dbSNP
rs8139993 1766 dbSNP
rs1293392572 1767 dbSNP
rs1356750358 1770 dbSNP
rs1212741693 1774 dbSNP
rs1201233086 1785 dbSNP
rs533611846 1785 dbSNP
rs1031123751 1790 dbSNP
rs1307915150 1802 dbSNP
rs1451951795 1803 dbSNP
rs1008977559 1804 dbSNP
rs1249788368 1805 dbSNP
rs1206332852 1806 dbSNP
rs1193969493 1808 dbSNP
rs11552897 1809 dbSNP
rs1277088331 1816 dbSNP
rs1341594941 1823 dbSNP
rs1258733871 1825 dbSNP
rs955197640 1828 dbSNP
rs1210378126 1831 dbSNP
rs566210880 1833 dbSNP
rs936541847 1834 dbSNP
rs1185358339 1837 dbSNP
rs925105484 1849 dbSNP
rs374801681 1869 dbSNP
rs371445362 1870 dbSNP
rs369004286 1872 dbSNP
rs975188265 1874 dbSNP
rs368196839 1875 dbSNP
rs374277579 1876 dbSNP
rs3830756 1880 dbSNP
rs397795029 1880 dbSNP
rs1393601494 1881 dbSNP
rs1321760021 1883 dbSNP
rs773156300 1889 dbSNP
rs942470978 1890 dbSNP
rs912272973 1898 dbSNP
rs1428022395 1929 dbSNP
rs996782466 1931 dbSNP
rs1216216919 1932 dbSNP
rs1301008704 1940 dbSNP
rs986490946 1942 dbSNP
rs1346813944 1952 dbSNP
rs1233856741 1957 dbSNP
rs1310246005 1959 dbSNP
rs1444258641 1970 dbSNP
rs951111790 1980 dbSNP
rs1241550743 1988 dbSNP
rs1486490511 1990 dbSNP
rs1017253413 1994 dbSNP
rs1005244297 2015 dbSNP
rs763902760 2016 dbSNP
rs1173940047 2028 dbSNP
rs1426801711 2038 dbSNP
rs974709760 2041 dbSNP
rs1398493145 2045 dbSNP
rs1393597027 2047 dbSNP
rs1345217977 2056 dbSNP
rs962938067 2059 dbSNP
rs939070357 2060 dbSNP
rs1034527688 2064 dbSNP
rs1441355160 2067 dbSNP
rs1001666400 2069 dbSNP
rs907295804 2070 dbSNP
rs879777937 2080 dbSNP
rs1024390812 2081 dbSNP
rs1317524811 2082 dbSNP
rs1426837494 2085 dbSNP
rs1251664652 2104 dbSNP
rs1045186629 2112 dbSNP
rs1194623154 2121 dbSNP
rs1478255219 2127 dbSNP
rs1248780410 2129 dbSNP
rs948318229 2138 dbSNP
rs1010279423 2139 dbSNP
rs1362965707 2148 dbSNP
rs891773046 2154 dbSNP
rs1176212163 2159 dbSNP
rs181079361 2170 dbSNP
rs990136357 2176 dbSNP
rs1162781162 2179 dbSNP
rs1393616374 2180 dbSNP
rs761092708 2197 dbSNP
rs1203179255 2201 dbSNP
rs1325301705 2204 dbSNP
rs1460021676 2215 dbSNP
rs139899037 2220 dbSNP
rs903756901 2223 dbSNP
rs1039513808 2230 dbSNP
rs1278088764 2231 dbSNP
rs987554961 2233 dbSNP
rs1241812376 2234 dbSNP
rs1271872382 2244 dbSNP
rs1334802815 2252 dbSNP
rs942502006 2259 dbSNP
rs1292485597 2263 dbSNP
rs1436367225 2265 dbSNP
rs912345438 2265 dbSNP
rs986952505 2273 dbSNP
rs1233090152 2274 dbSNP
rs1473316462 2279 dbSNP
rs929679789 2289 dbSNP
rs1297429503 2292 dbSNP
rs1416458530 2300 dbSNP
rs1029512494 2302 dbSNP
rs918231989 2303 dbSNP
rs374616840 2312 dbSNP
rs964204343 2318 dbSNP
rs1314947857 2324 dbSNP
rs1328489699 2330 dbSNP
rs1016893960 2336 dbSNP
rs1411858374 2340 dbSNP
rs1291542887 2341 dbSNP
rs962972146 2345 dbSNP
rs1034567636 2358 dbSNP
rs543452752 2359 dbSNP
rs1286468798 2364 dbSNP
rs1025225369 2365 dbSNP
rs1003265864 2366 dbSNP
rs753156479 2367 dbSNP
rs1024419071 2372 dbSNP
rs1483843455 2372 dbSNP
rs531690674 2375 dbSNP
rs948285773 2380 dbSNP
rs1485708451 2393 dbSNP
rs564632147 2397 dbSNP
rs1371244420 2411 dbSNP
rs1054048424 2414 dbSNP
rs1168312107 2418 dbSNP
rs1033446825 2432 dbSNP
rs1383984004 2440 dbSNP
rs1391734968 2449 dbSNP
rs1431879143 2456 dbSNP
rs1311221464 2462 dbSNP
rs1000161228 2465 dbSNP
rs1396669249 2476 dbSNP
rs544859436 2477 dbSNP
rs987438748 2480 dbSNP
rs933293289 2488 dbSNP
rs1227295313 2491 dbSNP
rs922036946 2492 dbSNP
rs1344674057 2495 dbSNP
rs113728595 2496 dbSNP
rs974823907 2496 dbSNP
rs1039589182 2506 dbSNP
rs1345171070 2507 dbSNP
rs1442890690 2515 dbSNP
rs1017147194 2526 dbSNP
rs1259006992 2528 dbSNP
rs1446382013 2535 dbSNP
rs552964044 2535 dbSNP
rs984058869 2543 dbSNP
rs1452336649 2545 dbSNP
rs541334405 2551 dbSNP
rs369748245 2553 dbSNP
rs573637753 2559 dbSNP
rs1211105566 2569 dbSNP
rs1446574669 2571 dbSNP
rs1174421864 2574 dbSNP
rs1297756230 2576 dbSNP
rs951351178 2576 dbSNP
rs1025278471 2578 dbSNP
rs890938707 2580 dbSNP
rs1003191997 2583 dbSNP
rs1439129815 2583 dbSNP
rs1050890410 2589 dbSNP
rs1258449094 2607 dbSNP
rs970363948 2609 dbSNP
rs1209353888 2617 dbSNP
rs1269930492 2627 dbSNP
rs1023374041 2633 dbSNP
rs1192745732 2634 dbSNP
rs6002415 2646 dbSNP
rs573705373 2650 dbSNP
rs1038453950 2669 dbSNP
rs1362200220 2673 dbSNP
rs1453125000 2677 dbSNP
rs774726028 2679 dbSNP
rs1460300094 2684 dbSNP
rs927573024 2691 dbSNP
rs1325675542 2695 dbSNP
rs980333112 2704 dbSNP
rs1368678591 2705 dbSNP
rs971585900 2708 dbSNP
rs771454010 2711 dbSNP
rs1285386167 2714 dbSNP
rs1304410819 2719 dbSNP
rs1448121649 2722 dbSNP
rs1228452201 2723 dbSNP
rs917419600 2728 dbSNP
rs1315765369 2729 dbSNP
rs988972513 2731 dbSNP
rs1332631202 2739 dbSNP
rs1421333069 2747 dbSNP
rs74476043 2748 dbSNP
rs1033063390 2749 dbSNP
rs1000186875 2752 dbSNP
rs1491025810 2757 dbSNP
rs112160492 2760 dbSNP
rs999791732 2760 dbSNP
rs1211914754 2764 dbSNP
rs1248656703 2770 dbSNP
rs964680367 2776 dbSNP
rs1472327728 2784 dbSNP
rs1422607165 2786 dbSNP
rs151243323 2792 dbSNP
rs1051996830 2794 dbSNP
rs933349067 2795 dbSNP
rs1475117685 2799 dbSNP
rs773419960 2801 dbSNP
rs891011426 2802 dbSNP
rs1051387658 2811 dbSNP
rs909735800 2812 dbSNP
rs1410015793 2816 dbSNP
rs993974994 2820 dbSNP
rs984333138 2821 dbSNP
rs1232668121 2830 dbSNP
rs1313323976 2832 dbSNP
rs1291431364 2838 dbSNP
rs951205974 2846 dbSNP
rs1250510681 2852 dbSNP
rs1482864795 2852 dbSNP
rs142464748 2853 dbSNP
rs981986059 2871 dbSNP
rs1484729775 2885 dbSNP
rs1181852242 2889 dbSNP
rs1415133346 2890 dbSNP
rs539619898 2894 dbSNP
rs1168818964 2903 dbSNP
rs1389891219 2904 dbSNP
rs536987517 2910 dbSNP
rs1309465301 2914 dbSNP
rs1228448004 2915 dbSNP
rs566267927 2917 dbSNP
rs1446620475 2919 dbSNP
rs1303396448 2924 dbSNP
rs1056214 2931 dbSNP
rs547645404 2932 dbSNP
rs926935492 2933 dbSNP
rs1268081278 2936 dbSNP
rs1342526098 2937 dbSNP
rs572600438 2945 dbSNP
rs1056221 2951 dbSNP
rs1056226 2958 dbSNP
rs1229500918 2961 dbSNP
rs779858266 2977 dbSNP
rs1032077585 2986 dbSNP
rs1401410403 2994 dbSNP
rs1340912087 2996 dbSNP
rs1345882977 3001 dbSNP
rs1044057463 3003 dbSNP
rs568654307 3004 dbSNP
rs76883097 3005 dbSNP
rs1402867412 3014 dbSNP
rs917469427 3015 dbSNP
rs745757884 3018 dbSNP
rs1170142106 3021 dbSNP
rs1392842463 3025 dbSNP
rs934836006 3027 dbSNP
rs186831572 3028 dbSNP
rs926069634 3031 dbSNP
rs1451549692 3038 dbSNP
rs1319804861 3039 dbSNP
rs978796418 3044 dbSNP
rs117655373 3046 dbSNP
rs531765078 3051 dbSNP
rs181669519 3065 dbSNP
rs955472190 3069 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084047. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep4 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gcucacacucuagugUGGAGGg 5'
                         :||||| 
Target 5' --------ucccuugGCCUCCc 3'
1 - 14
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084047
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep4
Location of target site ENST00000263256.6 | 3UTR | UCCCUUGGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
231 hsa-miR-3689d Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059166 TXNIP thioredoxin interacting protein 2 4
MIRT080699 KIAA1468 KIAA1468 2 2
MIRT218770 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT278059 KHNYN KH and NYN domain containing 2 2
MIRT345933 EIF4A1 eukaryotic translation initiation factor 4A1 2 2
MIRT366238 VMA21 VMA21, vacuolar ATPase assembly factor 2 2
MIRT449689 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT451149 C19orf53 chromosome 19 open reading frame 53 2 2
MIRT451266 NDUFA11 NADH:ubiquinone oxidoreductase subunit A11 2 2
MIRT451375 C19orf43 telomerase RNA component interacting RNase 2 2
MIRT451570 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451585 HIRIP3 HIRA interacting protein 3 2 2
MIRT451614 MEIS3P1 Meis homeobox 3 pseudogene 1 2 2
MIRT451763 ZNF611 zinc finger protein 611 2 6
MIRT452383 LY6E lymphocyte antigen 6 family member E 2 4
MIRT452573 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452735 PTGES3L prostaglandin E synthase 3 like 2 6
MIRT452867 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452975 CABP4 calcium binding protein 4 2 2
MIRT453215 CERS1 ceramide synthase 1 2 2
MIRT453259 PARP11 poly(ADP-ribose) polymerase family member 11 2 2
MIRT453449 GLG1 golgi glycoprotein 1 2 2
MIRT453479 PITPNM3 PITPNM family member 3 2 2
MIRT453663 CD207 CD207 molecule 2 6
MIRT453724 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT453760 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT454181 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454330 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT454338 CDKL1 cyclin dependent kinase like 1 2 2
MIRT454427 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454665 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454825 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT455130 TBC1D25 TBC1 domain family member 25 2 2
MIRT455166 SUV39H1 suppressor of variegation 3-9 homolog 1 2 2
MIRT455416 RXRB retinoid X receptor beta 2 2
MIRT455668 GLO1 glyoxalase I 2 2
MIRT455999 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456446 TMEM81 transmembrane protein 81 2 2
MIRT456642 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT456728 TMEM239 transmembrane protein 239 2 2
MIRT457131 ASPH aspartate beta-hydroxylase 2 2
MIRT457157 MXRA7 matrix remodeling associated 7 2 2
MIRT457358 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457458 UNC119B unc-119 lipid binding chaperone B 2 2
MIRT457619 UPK3BL uroplakin 3B like 1 2 2
MIRT457692 ZNF587 zinc finger protein 587 2 2
MIRT457727 SMOX spermine oxidase 2 2
MIRT457788 VWA1 von Willebrand factor A domain containing 1 2 2
MIRT457875 THEM6 thioesterase superfamily member 6 2 4
MIRT457909 ZNF212 zinc finger protein 212 2 2
MIRT458395 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT458496 MARVELD2 MARVEL domain containing 2 2 2
MIRT458544 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT458577 TCOF1 treacle ribosome biogenesis factor 1 2 2
MIRT458732 CES2 carboxylesterase 2 2 2
MIRT458814 ZNF843 zinc finger protein 843 2 2
MIRT458931 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT459341 ZNF17 zinc finger protein 17 2 2
MIRT459365 MPLKIP M-phase specific PLK1 interacting protein 2 6
MIRT459572 NLGN2 neuroligin 2 2 2
MIRT460015 DTX3L deltex E3 ubiquitin ligase 3L 2 4
MIRT460144 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT460653 IGFBP4 insulin like growth factor binding protein 4 2 2
MIRT460798 VPS33A VPS33A, CORVET/HOPS core subunit 2 2
MIRT461058 KCNK6 potassium two pore domain channel subfamily K member 6 2 4
MIRT461458 SLC19A3 solute carrier family 19 member 3 2 2
MIRT461572 SCO1 SCO1, cytochrome c oxidase assembly protein 2 4
MIRT461927 TNFSF14 TNF superfamily member 14 2 2
MIRT461953 C3 complement C3 2 2
MIRT462278 KRR1 KRR1, small subunit processome component homolog 2 2
MIRT462744 EFNB1 ephrin B1 2 2
MIRT463136 ZNF451 zinc finger protein 451 2 4
MIRT463566 ZBTB39 zinc finger and BTB domain containing 39 2 6
MIRT463866 WNT7B Wnt family member 7B 2 2
MIRT464326 UST uronyl 2-sulfotransferase 2 2
MIRT464796 UBE2F ubiquitin conjugating enzyme E2 F (putative) 2 2
MIRT465034 TTC39C tetratricopeptide repeat domain 39C 2 2
MIRT466207 TMED10 transmembrane p24 trafficking protein 10 2 2
MIRT467007 SSBP2 single stranded DNA binding protein 2 2 2
MIRT467029 SRSF1 serine and arginine rich splicing factor 1 2 4
MIRT468001 SKI SKI proto-oncogene 2 2
MIRT468031 SIKE1 suppressor of IKBKE 1 2 6
MIRT468575 SERBP1 SERPINE1 mRNA binding protein 1 2 6
MIRT468834 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT468970 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469450 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT470888 PLXND1 plexin D1 2 2
MIRT470953 PKM pyruvate kinase, muscle 2 2
MIRT471828 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT472590 NACC1 nucleus accumbens associated 1 2 2
MIRT472805 MTMR12 myotubularin related protein 12 2 2
MIRT472818 MTMR10 myotubularin related protein 10 2 6
MIRT472914 MSN moesin 2 2
MIRT474558 KLHDC3 kelch domain containing 3 2 2
MIRT474716 KIF13A kinesin family member 13A 2 6
MIRT475279 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT475300 IFNLR1 interferon lambda receptor 1 2 2
MIRT475759 HDLBP high density lipoprotein binding protein 2 2
MIRT475786 HDGF heparin binding growth factor 2 2
MIRT475933 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476212 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT476238 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 2 4
MIRT476799 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT477988 DNAL1 dynein axonemal light chain 1 2 2
MIRT478317 DDN dendrin 2 2
MIRT479257 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479344 CEP97 centrosomal protein 97 2 2
MIRT479522 CDCA4 cell division cycle associated 4 2 2
MIRT479906 CCDC117 coiled-coil domain containing 117 2 6
MIRT481147 AVL9 AVL9 cell migration associated 2 6
MIRT481735 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT482089 ALG8 ALG8, alpha-1,3-glucosyltransferase 2 2
MIRT482389 AEN apoptosis enhancing nuclease 2 2
MIRT483093 TFPI tissue factor pathway inhibitor 2 2
MIRT484246 ANK1 ankyrin 1 2 2
MIRT484342 EPN1 epsin 1 2 4
MIRT489141 C5orf38 chromosome 5 open reading frame 38 2 2
MIRT489163 MRPL12 mitochondrial ribosomal protein L12 2 4
MIRT489547 SOX11 SRY-box 11 2 4
MIRT489780 GRINA glutamate ionotropic receptor NMDA type subunit associated protein 1 2 2
MIRT489799 KRT80 keratin 80 2 6
MIRT490535 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT492198 SOCS1 suppressor of cytokine signaling 1 2 2
MIRT492283 SHISA6 shisa family member 6 2 4
MIRT501059 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT501094 SLC5A6 solute carrier family 5 member 6 2 4
MIRT503870 CBS cystathionine-beta-synthase 2 2
MIRT507981 BCL2L13 BCL2 like 13 2 4
MIRT508125 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT508205 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508385 SPTBN2 spectrin beta, non-erythrocytic 2 2 4
MIRT510308 PDRG1 p53 and DNA damage regulated 1 2 2
MIRT510462 ZDHHC18 zinc finger DHHC-type containing 18 2 2
MIRT512227 ATXN3 ataxin 3 2 8
MIRT512665 STEAP3 STEAP3 metalloreductase 2 2
MIRT514184 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT515053 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515138 ZNF799 zinc finger protein 799 2 4
MIRT515452 ZNF747 zinc finger protein 747 2 2
MIRT515791 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT515905 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT516129 MRPS16 mitochondrial ribosomal protein S16 2 6
MIRT516679 ZNF860 zinc finger protein 860 2 4
MIRT516750 ZNF100 zinc finger protein 100 2 2
MIRT516971 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT517491 NPAP1 nuclear pore associated protein 1 2 2
MIRT517774 PROM2 prominin 2 2 2
MIRT517938 ZNF431 zinc finger protein 431 2 4
MIRT518386 ZNF250 zinc finger protein 250 2 2
MIRT520621 TMEM41B transmembrane protein 41B 2 2
MIRT521028 SLC30A5 solute carrier family 30 member 5 2 2
MIRT521454 RAD51 RAD51 recombinase 2 2
MIRT521564 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT521581 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT522263 NKRF NFKB repressing factor 2 2
MIRT522410 MXI1 MAX interactor 1, dimerization protein 2 2
MIRT522543 MED28 mediator complex subunit 28 2 6
MIRT522915 KCNE3 potassium voltage-gated channel subfamily E regulatory subunit 3 2 2
MIRT523029 IGF1 insulin like growth factor 1 2 2
MIRT523854 ESPL1 extra spindle pole bodies like 1, separase 2 4
MIRT524184 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524520 CDK19 cyclin dependent kinase 19 2 2
MIRT524674 C12orf5 TP53 induced glycolysis regulatory phosphatase 2 2
MIRT530257 ZNF620 zinc finger protein 620 2 2
MIRT540691 BMP3 bone morphogenetic protein 3 2 2
MIRT540976 C17orf85 nuclear cap binding subunit 3 2 2
MIRT545505 NAP1L1 nucleosome assembly protein 1 like 1 2 2
MIRT545631 GGCX gamma-glutamyl carboxylase 2 2
MIRT547358 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT550701 MPL MPL proto-oncogene, thrombopoietin receptor 2 4
MIRT550717 PMPCA peptidase, mitochondrial processing alpha subunit 2 4
MIRT551203 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT553999 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 4
MIRT561081 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT563523 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT564463 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565233 TRAF6 TNF receptor associated factor 6 2 2
MIRT566618 NKAP NFKB activating protein 2 2
MIRT569527 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 2
MIRT569639 QPCT glutaminyl-peptide cyclotransferase 2 2
MIRT570253 SSPN sarcospan 2 2
MIRT570570 OTUD7B OTU deubiquitinase 7B 2 2
MIRT570621 MTF2 metal response element binding transcription factor 2 2 2
MIRT571098 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 2
MIRT575196 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 2 2
MIRT575554 Cd99 CD99 antigen 2 2
MIRT575634 Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like 2 2
MIRT608267 NOP14 NOP14 nucleolar protein 2 2
MIRT609314 FXYD6 FXYD domain containing ion transport regulator 6 2 2
MIRT627670 RPL28 ribosomal protein L28 2 2
MIRT631185 TSPAN14 tetraspanin 14 2 2
MIRT631964 YIPF5 Yip1 domain family member 5 2 2
MIRT632885 GINM1 glycoprotein integral membrane 1 2 2
MIRT642618 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT645609 TSPAN6 tetraspanin 6 2 2
MIRT662227 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662329 MYLK3 myosin light chain kinase 3 2 2
MIRT662725 LRRC3C leucine rich repeat containing 3C 2 2
MIRT665520 USP14 ubiquitin specific peptidase 14 2 2
MIRT666634 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT668969 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT670925 DESI1 desumoylating isopeptidase 1 2 2
MIRT673939 ZNF500 zinc finger protein 500 2 2
MIRT674675 PLCE1 phospholipase C epsilon 1 2 2
MIRT675230 MAK male germ cell associated kinase 2 2
MIRT680864 MACC1 MACC1, MET transcriptional regulator 2 2
MIRT681047 ZDBF2 zinc finger DBF-type containing 2 2 2
MIRT681105 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT683553 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684508 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684812 BRIX1 BRX1, biogenesis of ribosomes 2 2
MIRT685981 CCDC77 coiled-coil domain containing 77 2 2
MIRT686709 TBC1D19 TBC1 domain family member 19 2 2
MIRT686867 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688908 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT691208 KLHL30 kelch like family member 30 2 2
MIRT692298 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 2
MIRT694380 MTA1 metastasis associated 1 2 2
MIRT696497 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT700686 POLR3D RNA polymerase III subunit D 2 2
MIRT701088 PAPOLG poly(A) polymerase gamma 2 2
MIRT703373 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT706189 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT706648 SMIM19 small integral membrane protein 19 2 2
MIRT709466 KRTAP19-1 keratin associated protein 19-1 2 2
MIRT709699 DMWD DM1 locus, WD repeat containing 2 2
MIRT710693 LYRM4 LYR motif containing 4 2 2
MIRT713457 DNAJC11 DnaJ heat shock protein family (Hsp40) member C11 2 2
MIRT722409 RARS2 arginyl-tRNA synthetase 2, mitochondrial 2 2
MIRT725391 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 2
MIRT725548 DNMT3A DNA methyltransferase 3 alpha 2 2

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