pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol MED17   
Synonyms CRSP6, CRSP77, DRIP80, SRB4, TRAP80
Description mediator complex subunit 17
Transcript NM_004268   
Expression
Putative miRNA Targets on MED17
3'UTR of MED17
(miRNA target sites are highlighted)
>MED17|NM_004268|3'UTR
   1 TTTTTTCCAGATGTTTCCTAAAGAAGTTTCCAGAAACTTTGACTTGAAATGTTTGCAGATCAACTATAAGCACAAAGAAG
  81 AGATAACTTCCAAAAGAGTGCTGTTTTTAAAAATAATAATTAGGAAATGTTTATTTAGCACTTTCAAACTTTTCACTTTA
 161 TAAATGACAAGTGCTTTGAAATGCAGAAGTTTATGTACAGTTGTATATACAGTATGACAAGATGTAAAATAATATGTTTT
 241 TCATGCAGTTTAAAATATTACTAACTTAAGGGTTTCTATGTGCTTTTTAAAATATTCCTTCTTTGATGTTGACATCAAAT
 321 AAAGTATGTGGTTTAAAAAAATCTCCAAATACCTTTTTTTCCCCCCAAATACTTTCTAAACTTTTTTTTTTTGAGATGGT
 401 ATCTCACTCTGTAGCCCAGTCTGGAGTGCAGTGGTGTGATCATGGTTCACTGCAGTCTTGACCTCCCAGGCTTAGGTGAT
 481 CCTTCTGTCTCAGCCTTCCGAGTAGCTGGGACCACAGGCATGCACAACCACGCCTGGCTAATTTTTGTATTTTTTATAAA
 561 GACAGGGTTTTTCCATGTTGCCCAGGCTGGTTTCGAACTCGGCTCAAGTGATCTACCTGCCTCTGCCTCCCAAAGTGCTA
 641 GGATTACAGGCGTGAGCCACCATGCCCAGCCTACTCTAAATTATTGATAACCTCTTCCTCCAGTTGTCTCCTTTAAGCTT
 721 TCCTGGGTCTAACCTACATAGGTAATTTAAGAACATCCTCAGAAAGGACAGCTGAAGGCAATAGGAGGCAGATTATCTCT
 801 TTAGGGCGTCCTCAAGTTTTTTTGGTCTGTTCTCCCACTTGATTGACCTCACCAGTTGAGACACCTAGTGTATGGCTCAT
 881 GCCCAGCCTTCCACCTGGGATTCTCCAGCCTCCACCCAGCAGCCCTGGATTGCTTTCTCCAATTAAGGCCTTTCCATCAG
 961 CTCTCTGCTTTTTCAAAGCGAAAAAACTAATGGATTAGTGGGTTATCTTTTCCAAGGAACAGGTTTGCACTTCTTGGAAA
1041 AAGTGCCTAAAGTGTGCCCATTAATATGAGGATAGATTTAGGCTCATAAGCCTTTTGGTAACACTGAAAGTAGTATCATA
1121 TAGGCAAGCTCTCCTTATAAGTAAGGCTTTCAATTTTTAAAACAGACATCCTGCTTTAACAATTTGTAAGATGACTGTGC
1201 AGTAATAAAAGTCCTTTGTATTTCTCCACCGTGTTTTCATTAAAGAAAAATGGAGCTTGTGGGCCA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||| |:||   ||||||| 
Target 5' tgATCCTTCTGTCTCAGCCTt 3'
477 - 497 156.00 -16.70
2
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            |||| |||   || |||| 
Target 5' tgATCTACCTGCCTCTGCCTc 3'
609 - 629 128.00 -15.20
3
miRNA  3' gguaGAAGGAAGUCG-GAg 5'
              :|||| ||||| || 
Target 5' ggccTTTCCATCAGCTCTc 3'
947 - 965 126.00 -16.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1199454 84 ClinVar
COSN30162650 8 COSMIC
COSN30489983 18 COSMIC
COSN20077248 39 COSMIC
COSN31511632 47 COSMIC
COSN31601858 53 COSMIC
COSN30124195 72 COSMIC
COSN20077250 81 COSMIC
COSN31558844 83 COSMIC
COSN20081566 96 COSMIC
COSN30140431 96 COSMIC
COSN31548403 148 COSMIC
COSN32062322 393 COSMIC
COSN20363058 405 COSMIC
COSN16104957 979 COSMIC
COSN6612296 1164 COSMIC
COSN19559198 1169 COSMIC
COSN5710979 1427 COSMIC
COSN32134023 1685 COSMIC
COSN29260557 1897 COSMIC
COSN8879207 1972 COSMIC
COSN10094721 2079 COSMIC
COSN10094722 2518 COSMIC
COSN1550394 2553 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs758228406 1 dbSNP
rs779963969 1 dbSNP
rs751901725 3 dbSNP
rs1334567148 9 dbSNP
rs918145258 11 dbSNP
rs1252857683 15 dbSNP
rs762055694 19 dbSNP
rs1195847529 21 dbSNP
rs1467164584 21 dbSNP
rs1396117557 23 dbSNP
rs948311149 27 dbSNP
rs767661961 28 dbSNP
rs1166437368 32 dbSNP
rs1421722296 34 dbSNP
rs750516785 36 dbSNP
rs751450680 38 dbSNP
rs756174275 43 dbSNP
rs1325302708 51 dbSNP
rs1167179091 56 dbSNP
rs1460280096 57 dbSNP
rs1479503615 59 dbSNP
rs7935747 62 dbSNP
rs1444046010 64 dbSNP
rs1241404769 67 dbSNP
rs568235455 67 dbSNP
rs920274051 75 dbSNP
rs1378275569 81 dbSNP
rs116795572 84 dbSNP
rs1272741705 93 dbSNP
rs373900829 99 dbSNP
rs1194376204 117 dbSNP
rs539317486 117 dbSNP
rs1166353247 133 dbSNP
rs765445302 134 dbSNP
rs1389971775 148 dbSNP
rs983636107 150 dbSNP
rs190879412 155 dbSNP
rs919049918 157 dbSNP
rs750665289 168 dbSNP
rs1448896767 185 dbSNP
rs1336207765 186 dbSNP
rs1328114626 187 dbSNP
rs773728591 189 dbSNP
rs77132304 191 dbSNP
rs900306213 207 dbSNP
rs1164419139 213 dbSNP
rs545874328 216 dbSNP
rs1386699322 228 dbSNP
rs946641545 231 dbSNP
rs150825608 232 dbSNP
rs904578586 242 dbSNP
rs1180320399 244 dbSNP
rs1331157072 245 dbSNP
rs889019563 254 dbSNP
rs1222750936 261 dbSNP
rs1268000584 264 dbSNP
rs1341197597 266 dbSNP
rs998958512 269 dbSNP
rs1241610884 273 dbSNP
rs1031595002 279 dbSNP
rs758602957 295 dbSNP
rs1276494165 317 dbSNP
rs1236843511 319 dbSNP
rs1332586175 322 dbSNP
rs1303601041 326 dbSNP
rs1404567289 332 dbSNP
rs1300302346 335 dbSNP
rs895819278 335 dbSNP
rs1007403082 337 dbSNP
rs1401313135 339 dbSNP
rs1407398229 342 dbSNP
rs1157314727 343 dbSNP
rs1042973406 353 dbSNP
rs1430418146 354 dbSNP
rs199746704 354 dbSNP
rs904330106 354 dbSNP
rs1023160908 361 dbSNP
rs1217537907 361 dbSNP
rs1447048394 362 dbSNP
rs970306884 363 dbSNP
rs1221993967 366 dbSNP
rs1209136810 369 dbSNP
rs1325668785 376 dbSNP
rs998732574 377 dbSNP
rs1453356317 381 dbSNP
rs553014429 382 dbSNP
rs796148870 382 dbSNP
rs71926524 383 dbSNP
rs1407406068 384 dbSNP
rs1027835038 386 dbSNP
rs1479638576 386 dbSNP
rs950483497 388 dbSNP
rs1187884240 392 dbSNP
rs1170939835 393 dbSNP
rs1383738085 394 dbSNP
rs1457884692 396 dbSNP
rs1241014271 403 dbSNP
rs1164291681 404 dbSNP
rs61904957 405 dbSNP
rs1387932521 424 dbSNP
rs1462281252 427 dbSNP
rs911681852 436 dbSNP
rs377306809 439 dbSNP
rs1202998419 445 dbSNP
rs965692346 446 dbSNP
rs1215375046 455 dbSNP
rs956836196 466 dbSNP
rs974432608 467 dbSNP
rs1013988732 469 dbSNP
rs1450239668 470 dbSNP
rs1383661086 471 dbSNP
rs1336613847 472 dbSNP
rs1364079678 476 dbSNP
rs1402894909 479 dbSNP
rs921825121 486 dbSNP
rs1435361881 489 dbSNP
rs1409757389 496 dbSNP
rs946670235 500 dbSNP
rs1319683177 501 dbSNP
rs1184433508 507 dbSNP
rs1445883294 507 dbSNP
rs1243267868 511 dbSNP
rs1244008696 515 dbSNP
rs1024949129 516 dbSNP
rs1182894781 527 dbSNP
rs969394971 529 dbSNP
rs769259458 532 dbSNP
rs572859027 533 dbSNP
rs1203407262 538 dbSNP
rs1306727243 542 dbSNP
rs1247478526 554 dbSNP
rs1248494763 560 dbSNP
rs1360229547 567 dbSNP
rs1465545179 573 dbSNP
rs923801482 574 dbSNP
rs909473068 577 dbSNP
rs1376084948 578 dbSNP
rs963533319 595 dbSNP
rs375300661 596 dbSNP
rs1353158109 601 dbSNP
rs1167847801 602 dbSNP
rs1426220969 604 dbSNP
rs1423560270 607 dbSNP
rs918985856 609 dbSNP
rs182140842 610 dbSNP
rs1452242118 612 dbSNP
rs1442252095 614 dbSNP
rs1028403410 616 dbSNP
rs1177742637 617 dbSNP
rs562239063 622 dbSNP
rs1225021172 632 dbSNP
rs778826366 632 dbSNP
rs529831704 652 dbSNP
rs557560538 653 dbSNP
rs943042101 658 dbSNP
rs369910365 666 dbSNP
rs995106211 670 dbSNP
rs1042945508 677 dbSNP
rs1308381523 680 dbSNP
rs1223674928 681 dbSNP
rs1028196747 693 dbSNP
rs575924576 696 dbSNP
rs1005493817 704 dbSNP
rs1302124692 708 dbSNP
rs559897275 722 dbSNP
rs1342256026 750 dbSNP
rs1364989055 751 dbSNP
rs1018689967 755 dbSNP
rs1014424014 757 dbSNP
rs527330483 759 dbSNP
rs921607205 775 dbSNP
rs999075544 782 dbSNP
rs1220492239 784 dbSNP
rs979371120 788 dbSNP
rs775043990 799 dbSNP
rs1052986883 805 dbSNP
rs923889319 806 dbSNP
rs186816654 808 dbSNP
rs895649250 809 dbSNP
rs1224564575 812 dbSNP
rs536705553 814 dbSNP
rs1013646011 828 dbSNP
rs1345240602 831 dbSNP
rs1025065169 837 dbSNP
rs917307884 838 dbSNP
rs1386510434 848 dbSNP
rs1288872838 864 dbSNP
rs950149705 866 dbSNP
rs905864489 867 dbSNP
rs1480661848 869 dbSNP
rs995284987 874 dbSNP
rs969344556 879 dbSNP
rs1002240743 880 dbSNP
rs886718017 881 dbSNP
rs150428941 888 dbSNP
rs1005033671 889 dbSNP
rs531472981 895 dbSNP
rs963686229 899 dbSNP
rs972631771 900 dbSNP
rs1204822839 905 dbSNP
rs1483134135 910 dbSNP
rs919406718 912 dbSNP
rs755470134 913 dbSNP
rs955065792 914 dbSNP
rs781678859 918 dbSNP
rs372492354 933 dbSNP
rs191653900 938 dbSNP
rs762658720 940 dbSNP
rs1258694928 945 dbSNP
rs965754176 949 dbSNP
rs995931390 956 dbSNP
rs867569767 957 dbSNP
rs943033970 961 dbSNP
rs1405094952 969 dbSNP
rs567872363 978 dbSNP
rs1170668014 980 dbSNP
rs535555225 981 dbSNP
rs925856757 1009 dbSNP
rs1373906944 1023 dbSNP
rs1169974258 1024 dbSNP
rs1244992687 1029 dbSNP
rs934566983 1029 dbSNP
rs756731525 1037 dbSNP
rs1357015748 1041 dbSNP
rs1461205924 1046 dbSNP
rs979537189 1050 dbSNP
rs183774901 1059 dbSNP
rs1053464003 1061 dbSNP
rs778462403 1068 dbSNP
rs956855036 1073 dbSNP
rs895609583 1074 dbSNP
rs1452728271 1077 dbSNP
rs1382024264 1085 dbSNP
rs1287603445 1086 dbSNP
rs79301493 1088 dbSNP
rs7103189 1102 dbSNP
rs1230237649 1108 dbSNP
rs1396896282 1116 dbSNP
rs1167581062 1117 dbSNP
rs1427999364 1118 dbSNP
rs539855805 1118 dbSNP
rs1164368519 1120 dbSNP
rs905318241 1136 dbSNP
rs771641530 1139 dbSNP
rs1002188091 1143 dbSNP
rs1299263608 1147 dbSNP
rs1311896556 1152 dbSNP
rs557844573 1153 dbSNP
rs576697131 1156 dbSNP
rs537707201 1165 dbSNP
rs556008227 1167 dbSNP
rs927401595 1169 dbSNP
rs1194882642 1175 dbSNP
rs1481909729 1177 dbSNP
rs1016301815 1179 dbSNP
rs1482252363 1180 dbSNP
rs1358071175 1183 dbSNP
rs1282388722 1189 dbSNP
rs1205119975 1190 dbSNP
rs1241039429 1191 dbSNP
rs1336143828 1196 dbSNP
rs1327863612 1201 dbSNP
rs574240268 1208 dbSNP
rs775292085 1210 dbSNP
rs138176450 1212 dbSNP
rs886666845 1225 dbSNP
rs1424141081 1231 dbSNP
rs117067264 1232 dbSNP
rs12272092 1234 dbSNP
rs902010834 1235 dbSNP
rs1180548574 1242 dbSNP
rs1363585730 1242 dbSNP
rs954868498 1244 dbSNP
rs987636237 1245 dbSNP
rs1481612956 1246 dbSNP
rs149549937 1248 dbSNP
rs1222724593 1259 dbSNP
rs1427507769 1260 dbSNP
rs563891302 1266 dbSNP
rs978492085 1268 dbSNP
rs903625248 1269 dbSNP
rs925618070 1278 dbSNP
rs1000513771 1286 dbSNP
rs771882919 1286 dbSNP
rs1347126317 1287 dbSNP
rs1200928035 1292 dbSNP
rs1404510956 1296 dbSNP
rs1348216290 1299 dbSNP
rs1371147665 1303 dbSNP
rs1401350749 1304 dbSNP
rs934322282 1308 dbSNP
rs1157552822 1311 dbSNP
rs1411578886 1315 dbSNP
rs1291897531 1316 dbSNP
rs1430361132 1320 dbSNP
rs1199717122 1326 dbSNP
rs1366972705 1327 dbSNP
rs377723984 1332 dbSNP
rs988710337 1348 dbSNP
rs917189808 1355 dbSNP
rs1194770817 1358 dbSNP
rs879446696 1363 dbSNP
rs1267468722 1369 dbSNP
rs531509897 1372 dbSNP
rs1263462318 1379 dbSNP
rs1223134171 1383 dbSNP
rs576760804 1392 dbSNP
rs549616469 1397 dbSNP
rs746813928 1398 dbSNP
rs371399335 1401 dbSNP
rs981040783 1413 dbSNP
rs1275786148 1414 dbSNP
rs927380597 1420 dbSNP
rs561644106 1422 dbSNP
rs1407306437 1423 dbSNP
rs905265807 1433 dbSNP
rs1176244449 1436 dbSNP
rs930738484 1437 dbSNP
rs1219970656 1445 dbSNP
rs1422681887 1448 dbSNP
rs1244496675 1454 dbSNP
rs763671541 1457 dbSNP
rs529094280 1460 dbSNP
rs1246820501 1461 dbSNP
rs1186608259 1463 dbSNP
rs1487849071 1468 dbSNP
rs899128393 1472 dbSNP
rs907872701 1477 dbSNP
rs1268946265 1482 dbSNP
rs1447268944 1485 dbSNP
rs751304579 1489 dbSNP
rs940712893 1495 dbSNP
rs993915108 1497 dbSNP
rs1167802012 1503 dbSNP
rs1390522775 1506 dbSNP
rs1341562768 1507 dbSNP
rs187101541 1524 dbSNP
rs1248257919 1529 dbSNP
rs1384258472 1532 dbSNP
rs890724679 1534 dbSNP
rs1009004769 1538 dbSNP
rs1017696966 1539 dbSNP
rs7943111 1542 dbSNP
rs978441484 1544 dbSNP
rs1437200578 1549 dbSNP
rs932120203 1551 dbSNP
rs1410123720 1553 dbSNP
rs1295518502 1555 dbSNP
rs1363367455 1561 dbSNP
rs1033182766 1562 dbSNP
rs1051051971 1569 dbSNP
rs190404289 1586 dbSNP
rs1445903390 1594 dbSNP
rs1385835570 1598 dbSNP
rs761547787 1599 dbSNP
rs988923903 1603 dbSNP
rs1234340975 1610 dbSNP
rs903574162 1614 dbSNP
rs35932333 1620 dbSNP
rs917156438 1623 dbSNP
rs1298857724 1625 dbSNP
rs1272739032 1627 dbSNP
rs1248327083 1633 dbSNP
rs971332710 1637 dbSNP
rs1360216432 1643 dbSNP
rs1344730620 1647 dbSNP
rs1312670799 1650 dbSNP
rs980029001 1662 dbSNP
rs1001030027 1674 dbSNP
rs1375997010 1677 dbSNP
rs1280432937 1682 dbSNP
rs113290707 1709 dbSNP
rs1369620618 1712 dbSNP
rs776676229 1722 dbSNP
rs1426047308 1729 dbSNP
rs551770348 1741 dbSNP
rs761904352 1742 dbSNP
rs1274501564 1744 dbSNP
rs920712259 1762 dbSNP
rs1177630277 1773 dbSNP
rs1463299191 1774 dbSNP
rs1187516552 1775 dbSNP
rs1013238082 1777 dbSNP
rs929303716 1778 dbSNP
rs1248439057 1779 dbSNP
rs570026323 1780 dbSNP
rs754713080 1786 dbSNP
rs1224955736 1795 dbSNP
rs537746202 1798 dbSNP
rs1264881517 1804 dbSNP
rs1220005231 1807 dbSNP
rs765390859 1810 dbSNP
rs1180050914 1811 dbSNP
rs890473070 1812 dbSNP
rs1009078174 1815 dbSNP
rs1228214169 1816 dbSNP
rs1002017073 1820 dbSNP
rs1039264102 1838 dbSNP
rs1286098236 1841 dbSNP
rs1027244286 1844 dbSNP
rs1406337217 1844 dbSNP
rs952127056 1849 dbSNP
rs1455922403 1850 dbSNP
rs1346946477 1854 dbSNP
rs1159705663 1859 dbSNP
rs985279747 1860 dbSNP
rs1405873283 1861 dbSNP
rs1167093530 1863 dbSNP
rs1386508940 1864 dbSNP
rs907994410 1865 dbSNP
rs900644627 1867 dbSNP
rs962027188 1872 dbSNP
rs1456962802 1874 dbSNP
rs1189602763 1878 dbSNP
rs1321416674 1882 dbSNP
rs1000353449 1885 dbSNP
rs976105325 1892 dbSNP
rs1032761293 1894 dbSNP
rs556145058 1895 dbSNP
rs1224504745 1900 dbSNP
rs1009892536 1904 dbSNP
rs1230495977 1915 dbSNP
rs1294647959 1927 dbSNP
rs1024362291 1929 dbSNP
rs1326401063 1930 dbSNP
rs971072733 1931 dbSNP
rs574380929 1934 dbSNP
rs927204351 1936 dbSNP
rs1363399422 1947 dbSNP
rs1052605924 1949 dbSNP
rs1321163760 1949 dbSNP
rs879642634 1949 dbSNP
rs1178402207 1950 dbSNP
rs555829085 1951 dbSNP
rs974335276 1952 dbSNP
rs796352468 1955 dbSNP
rs553260699 1956 dbSNP
rs920675812 1961 dbSNP
rs929351742 1964 dbSNP
rs368237356 1978 dbSNP
rs1189959150 1980 dbSNP
rs1204768078 1984 dbSNP
rs1483112150 1991 dbSNP
rs545537106 1995 dbSNP
rs911853462 2008 dbSNP
rs1002536226 2012 dbSNP
rs1308760976 2015 dbSNP
rs1026944810 2020 dbSNP
rs574478062 2020 dbSNP
rs944716507 2021 dbSNP
rs1039252709 2023 dbSNP
rs575779784 2025 dbSNP
rs1338596541 2034 dbSNP
rs1396428105 2038 dbSNP
rs1160194582 2041 dbSNP
rs1000352588 2042 dbSNP
rs1301333226 2045 dbSNP
rs1055062740 2050 dbSNP
rs564111611 2054 dbSNP
rs1360087065 2068 dbSNP
rs1014998963 2070 dbSNP
rs1387679824 2073 dbSNP
rs962139597 2077 dbSNP
rs1442226516 2078 dbSNP
rs541062162 2079 dbSNP
rs976052699 2082 dbSNP
rs1286955243 2086 dbSNP
rs1348092641 2095 dbSNP
rs1010378396 2097 dbSNP
rs1024063985 2098 dbSNP
rs1317112070 2107 dbSNP
rs539748777 2130 dbSNP
rs766538539 2131 dbSNP
rs1310401893 2133 dbSNP
rs1034266327 2138 dbSNP
rs1371457708 2139 dbSNP
rs559207594 2149 dbSNP
rs1442741487 2151 dbSNP
rs1367478089 2154 dbSNP
rs1212937276 2157 dbSNP
rs925590537 2160 dbSNP
rs1367231208 2162 dbSNP
rs962646916 2163 dbSNP
rs561681931 2165 dbSNP
rs1482678245 2169 dbSNP
rs1252136810 2174 dbSNP
rs182285461 2180 dbSNP
rs1481796359 2185 dbSNP
rs1195432115 2186 dbSNP
rs1025873217 2187 dbSNP
rs1052574551 2188 dbSNP
rs1355631463 2191 dbSNP
rs751901825 2198 dbSNP
rs983907686 2199 dbSNP
rs949149540 2211 dbSNP
rs1287990423 2216 dbSNP
rs1046009406 2219 dbSNP
rs1426348810 2223 dbSNP
rs1436900832 2224 dbSNP
rs1347471632 2226 dbSNP
rs1324358683 2240 dbSNP
rs912010508 2250 dbSNP
rs755277442 2251 dbSNP
rs974737803 2255 dbSNP
rs1458121857 2270 dbSNP
rs1411625452 2273 dbSNP
rs1181016571 2280 dbSNP
rs1471446031 2302 dbSNP
rs1248084560 2307 dbSNP
rs1199021868 2314 dbSNP
rs1048778043 2315 dbSNP
rs1265221796 2324 dbSNP
rs922175408 2330 dbSNP
rs936221968 2331 dbSNP
rs1054732289 2333 dbSNP
rs113537782 2343 dbSNP
rs1004430927 2351 dbSNP
rs1226341664 2354 dbSNP
rs1325993255 2355 dbSNP
rs946246828 2366 dbSNP
rs1015450395 2375 dbSNP
rs563111547 2378 dbSNP
rs1320876630 2382 dbSNP
rs1436381522 2384 dbSNP
rs559250409 2389 dbSNP
rs906993013 2398 dbSNP
rs1273841847 2404 dbSNP
rs1001185924 2407 dbSNP
rs1030460244 2420 dbSNP
rs1172761693 2435 dbSNP
rs953494390 2439 dbSNP
rs1190436536 2445 dbSNP
rs1465341223 2447 dbSNP
rs1033985974 2449 dbSNP
rs898179321 2450 dbSNP
rs17652258 2455 dbSNP
rs551520488 2460 dbSNP
rs958331356 2461 dbSNP
rs116603485 2468 dbSNP
rs1342976608 2477 dbSNP
rs1205756966 2480 dbSNP
rs951282107 2481 dbSNP
rs750364919 2482 dbSNP
rs1198427266 2487 dbSNP
rs1319099609 2491 dbSNP
rs186795956 2497 dbSNP
rs1454946165 2499 dbSNP
rs77965059 2506 dbSNP
rs1455736290 2518 dbSNP
rs1413489771 2521 dbSNP
rs1422614019 2525 dbSNP
rs974812987 2526 dbSNP
rs981821021 2528 dbSNP
rs921913138 2539 dbSNP
rs549385796 2544 dbSNP
rs937657281 2545 dbSNP
rs1186548351 2556 dbSNP
rs144164783 2561 dbSNP
rs1237775988 2565 dbSNP
rs193210922 2574 dbSNP
rs1384506132 2578 dbSNP
rs1440967979 2582 dbSNP
rs1322288767 2584 dbSNP
rs564642038 2595 dbSNP
rs1341496838 2602 dbSNP
rs909104210 2603 dbSNP
rs1036827665 2622 dbSNP
rs1230470966 2623 dbSNP
rs778340005 2626 dbSNP
rs1442605094 2627 dbSNP
rs1284042542 2642 dbSNP
rs901004402 2649 dbSNP
rs1295191884 2651 dbSNP
rs16919393 2654 dbSNP
rs907380987 2663 dbSNP
rs1429860509 2667 dbSNP
rs1229091307 2676 dbSNP
rs1166653087 2685 dbSNP
rs937049296 2691 dbSNP
rs1055553023 2702 dbSNP
rs1030406560 2708 dbSNP
rs898119111 2712 dbSNP
rs1181119368 2713 dbSNP
rs1471672217 2724 dbSNP
rs1252932489 2729 dbSNP
rs1007948171 2738 dbSNP
rs1482778123 2742 dbSNP
rs1354351133 2747 dbSNP
rs995217239 2762 dbSNP
rs1223861669 2775 dbSNP
rs1032354823 2793 dbSNP
rs539218759 2797 dbSNP
rs139952347 2805 dbSNP
rs1227005069 2807 dbSNP
rs1352673246 2829 dbSNP
rs1289854590 2830 dbSNP
rs1409990689 2838 dbSNP
rs887053425 2839 dbSNP
rs779598481 2840 dbSNP
rs1296006549 2842 dbSNP
rs535442360 2846 dbSNP
rs185609292 2848 dbSNP
rs1350444511 2850 dbSNP
rs141831199 2852 dbSNP
rs763078428 2854 dbSNP
rs188557117 2858 dbSNP
rs146251265 2859 dbSNP
rs1472426798 2862 dbSNP
rs1195964782 2867 dbSNP
rs1367291047 2871 dbSNP
rs1029044705 2874 dbSNP
rs1488828728 2881 dbSNP
rs1457836843 2887 dbSNP
rs1219943891 2892 dbSNP
rs982270511 2893 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084046. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep4 HITS-CLIP data was present in GSM1084047. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep4 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguagaaggaaGUCGGAg 5'
                     |||||| 
Target 5' gccaccaugccCAGCCU- 3'
16 - 32
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084046
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep4
Location of target site ENST00000251871.3 | 3UTR | AUUACAGGCGUGAGCCACCAUGCCCAGCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084047
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep4
Location of target site ENST00000251871.3 | 3UTR | GGAUUACAGGCGUGAGCCACCAUGCCCAGCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

Error report submission