pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF585B   
Synonyms SZFP41
Description zinc finger protein 585B
Transcript NM_152279   
Expression
Putative miRNA Targets on ZNF585B
3'UTR of ZNF585B
(miRNA target sites are highlighted)
>ZNF585B|NM_152279|3'UTR
   1 GAGAAACAGTGTGAGAAAACCCCCCTGAGGGTTGGGTCTGATTGTACACTGTTGCACGCATGCAGCAGAAAAATATGTAT
  81 ATTATTGTAAATAGAAATGACCACATCAGAATGTCACACATGGCTGTTCTGGAGAGGGCCTCTGAGAAGGCACTGAATGA
 161 GGCGAGGGACCCTTCCTACATTGTCACCATCCCCAGTAAACCTTGGGTCATTATTCATACTGACAAGGAACCGAGTCAAT
 241 TTGGTGAATAGGAAAAGCCTTCTCATGAAAACTACAATAGAATACTGTTACCAAATTCTTCATAAGAAAGATCATATTAT
 321 GGGAATGATAATCCTGTTTACTGTGGATTAGGTATAGTGCCAACAGTTTGAATGGTAAGACAACATAATATATATGATAG
 401 TGATGAATCCTTCTGTGAGTTGTTTGTTCCAGAACACACTGTCTAGTAGAATTGTGGGTATTTTCTTCTTTTGAATCGAA
 481 CACAGTTGTGCATATCCAATTCCCCATTGAGTATTTCTATCAAGCAAGAGATACTGCAATAAGACAAACTCCCTGTGTAT
 561 TCAGACACAGACCTCAGAGCGTATGTTGAGTCCCCATTGTCATAGAAAAAGACTTACAGTCCCCTTCATTATCTGCCAGG
 641 ACTCTCTCTGAGCCCCACAGGTTCTCAGCACATTGTGTTTGACACCCAGCACAGTGTTTTTTCTTTTTCTTTCTTTCTTT
 721 CTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTCTTTCTTTCTTTTT
 801 CTTTCTTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTGAGACA
 881 GAGTCTTGCTCTGTCGGGCAAGCTAGAGTGCAGTGGCGCTATCTTGGCTCACTGCAACCTCCGTCTCCCGGGCTCAAGCA
 961 ATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTGCGTGTGCCACCACGCCCAGCTAATTTTTGTATGTTTAGTAGAAA
1041 CGGGGGTTTCACCATGCTGGCCAGGCTGGTCTCGAACTCCTGACCTCATGATCCGCCCGCCTCGGCCTCCCAAAGTCCTG
1121 GGATTACGGACGTGAGCCACTGCGCCCGGCCCAGCACAGTGTTTTGTACACTCCCACCACCCTCAAGAAAGCCTTTGAGG
1201 TTAGGATTTTCAGGTCATCTGGGAGAACTTAAATTCTTCCTTCTGCTATTACAATTCTTCTCACTCAGTTGCCTGCCTCT
1281 TTTTTTTTTTTAATTTACTTGTGACTGAGTTGAAGCCCAGCATTTTACTTTCCTTAATGATCTGACTTTCATAAGTTGAT
1361 AAGTCATGAAATCATTATCTTACATTATATGAGATATGAGATAAATCATAAATCATATGAAATTGATAACTCATATGAAA
1441 ACCAACCCCACCATATGTTCACTGTCTACTTGTGTCCATCTTCGTCCCACGCACCCCACAAGGACCTTCCCCGCCATGTG
1521 CCTCAAACATCAGTTCCTGACTCAGGGCCTTTGTATTTGCAGTGCCCGTTGCAAAGAGCACAATTCTTTATTTTATCTGT
1601 GGCTTGTCCGTCATGTCTTTTTTTCCATGACACCTCCACACAGGCCTTCCCTGCCTGCCTGGTTTAAAATTCCAGCCCCT
1681 TACCCTTCCTCCTTTATTCTTCTCCCTAGCAATTTCCACCATGCTGCCTGGTGTATTTTCCTCATTTCTCTGTGGCTTCT
1761 ACACTAGAAAATATTTCCCTTTTGTTCACCACTATGAGTCTAGACCCATGACTGCCATACAGCAGGCATTCCATAAATGC
1841 ACCTGTGGAGAGTTGACCCATGCTTGTTGCGTGACTTCTGTCTGATTTTTTTCTGTGTTGCAGCATAAGAAGCGCTAATA
1921 GGGAGAACCAACTTGGCTAAAACACACCAGGCTTTTTCACCTCTAGTCTGTACCTGGGCTGTATCCCTTCTCAACCCTAA
2001 AGCTAAAAAGTCATTGTGAACCTTTTGGTCTGATGCTAAAGAAGGGAAAACAGGTACAGGAAATCCCATGTGGATGCTTG
2081 CTTCCAGGATTTCCTGCCATGATTCCAGAATCCCACAGCTCCAACATGATTGCAAAAGACTCCCTGCTCATTTTTCCTCA
2161 GCATGCACAGCGCTGTCCTGTCTCAGTTGCAACTCGACAGAGCCGCATTTACTCCAGAACCCAATCCACACACCTGCTCA
2241 TCCTGCCCCGAGAGGAGTGCCTGAAGCCAATAGCAGGGAACTAGAGCAGACTTGGGTGGATCTTCATTGGATATTAGGTA
2321 TCTTGCCCTAGATAGGCAGCAGTGGCCTTACAGATGCTGACAGATGATCTGATTAGATGCACAGTTGCTGGGTGGCGTCT
2401 GGGGCCAGTCTATTGGCAGTTCTGGGAGTGGGAACTATTTGGGCTCTGCAAAGATGGTTTCACCTTTAAGAAGGGCAGTA
2481 TGGGGAGGTGAAGATGGGGCCCAAAGGATAGAACATAGTCAAAGAAGCAGGGCCACAATGCCCCTTTAATTCCCAAGCCC
2561 TAGTTGGGCAGTGCTTGGTGACACATCCCATTACCTCACCTTAGATCAATGTCTACTGAGCCATCATTAGCTCTGCTTCC
2641 TCACTTCTTCACAGTATCTGATGGCCCATCACATGCTGCTCAACATCTTAGACCAATGTCTGCTCACCCATTACCTCCCT
2721 TCACCTCATCCAGCACTGTATCTGAAGCTTCACTATTCTTCCTTCAGTTTTGGATATTTTGTGATACAACATTATCCCCA
2801 ACTTAGGACAATGTCAGCTGACTCTCAGGAGGGTGCCTGGAGATCACCTCTTCCTTCCTAACATACCCTAGAACAAGGTC
2881 TGGTCCCCTTCATTATTCCCATTTTACCTTACTCCTAAGTGTATCACTCCTCATGAATTCCAGGAAATATGGAGGAAAAC
2961 ACATTTCACTGTACATGACTTTCAATAATTTCTCCTTTATATTTATTGTAACGTGATATTTTAGTGCTGACATATATATG
3041 TATATGTATGCCCATTTATATAAAAGACTAGTTTTTAGAGAAATTTTAGGTTCACAGCAAAATGGGGCAGAAGGTACAGA
3121 GATTTCCCATATATCCCCTACCCTCACATATACACAGCCTCCCCCATCATCAACATCCCCCTTCAGAGTGGTACATTTGT
3201 TACAATTGATGAAACTACATTGACACTATCGGCCAAAGTCCATGGTTTAATTAGGGTTCAGTCTTGATGTGCATTCTGTG
3281 GGTTGAGACAAATGAATAATGACATGTATGCATTATTACAGAAGGATAAAGAGCCGTTTCACTGTCCCAATAATCCTCTG
3361 TGTTTCGCCTACTCCTCTAAACTCCTGGCTATTTTCTTTTGTCTCCATAATTTTGCCTCTGAACCATAAAGTATGCAGCC
3441 TTTTCAGATTGATTTGTTTCACTTAGTAATGTGGATTTAAGTTTCTTCCATGTCTTTTCGTAGCTTGCTAGCTCTTTTTT
3521 TTTTTTTTTTCTCATTGAATAATATGCTATTGTCTGGAAGTACCATGACTTATTTATCCATTCACCTACTGAAGGACACC
3601 TTAATTGCTTCCAAGTTTTGTTGATTATGAATAAAGATGCTATAAACA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||: ||||   ||||||| 
Target 5' caATTCTCCTGCCTCAGCCTc 3'
959 - 979 156.00 -17.50
2
miRNA  3' gguAGAAGGAAGUCGGAg 5'
             |||||||||||::| 
Target 5' tatTCTTCCTTCAGTTTt 3'
2754 - 2771 143.00 -18.80
3
miRNA  3' ggUAGAAGGAAGUCGGAg 5'
            ||:||:| ||||| | 
Target 5' tcATTTTTCCTCAGCATg 3'
2148 - 2165 132.00 -14.22
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30116217 1 COSMIC
COSN30467252 20 COSMIC
COSN24006750 24 COSMIC
COSN30482607 29 COSMIC
COSN30482606 30 COSMIC
COSN7125969 32 COSMIC
COSN30188764 36 COSMIC
COSN30156433 40 COSMIC
COSN30497609 55 COSMIC
COSN20093583 57 COSMIC
COSN30107808 63 COSMIC
COSN31560991 72 COSMIC
COSN30524018 131 COSMIC
COSN32063729 413 COSMIC
COSN7125968 775 COSMIC
COSN28535350 811 COSMIC
COSN23918224 820 COSMIC
COSN28517193 825 COSMIC
COSN28513557 833 COSMIC
COSN30003400 1014 COSMIC
COSN22583426 1148 COSMIC
COSN21562744 1660 COSMIC
COSN24725096 2004 COSMIC
COSN9356544 2128 COSMIC
COSN21855058 2214 COSMIC
COSN16106731 2245 COSMIC
COSN9356543 2363 COSMIC
COSN25590842 2698 COSMIC
COSN29441364 2866 COSMIC
COSN1767525 3137 COSMIC
COSN19368486 3515 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs529082409 9 dbSNP
rs764936915 9 dbSNP
rs1159972879 10 dbSNP
rs1362000162 11 dbSNP
rs1166783886 14 dbSNP
rs759297224 19 dbSNP
rs1489991497 20 dbSNP
rs765969374 20 dbSNP
rs760522141 22 dbSNP
rs773239134 24 dbSNP
rs371111340 25 dbSNP
rs374990717 26 dbSNP
rs745763850 26 dbSNP
rs532916604 27 dbSNP
rs771829264 29 dbSNP
rs372419837 30 dbSNP
rs774161366 31 dbSNP
rs768799624 37 dbSNP
rs539345233 39 dbSNP
rs1422630563 44 dbSNP
rs1302521483 52 dbSNP
rs1475463707 57 dbSNP
rs1416062346 58 dbSNP
rs1326625453 71 dbSNP
rs1335348491 77 dbSNP
rs1240070060 91 dbSNP
rs571544484 97 dbSNP
rs111471565 100 dbSNP
rs920088430 105 dbSNP
rs1293226060 106 dbSNP
rs537863450 106 dbSNP
rs1242895482 120 dbSNP
rs939724401 124 dbSNP
rs1250281015 132 dbSNP
rs1211017232 137 dbSNP
rs1436820772 151 dbSNP
rs912334616 161 dbSNP
rs113749980 163 dbSNP
rs1442316817 168 dbSNP
rs1162385658 172 dbSNP
rs1157208440 180 dbSNP
rs1459404801 187 dbSNP
rs1272879640 188 dbSNP
rs1234443066 191 dbSNP
rs953745356 196 dbSNP
rs1324025546 213 dbSNP
rs920963234 214 dbSNP
rs1212270047 228 dbSNP
rs867534219 232 dbSNP
rs1360885168 233 dbSNP
rs990080983 239 dbSNP
rs957538839 241 dbSNP
rs1297916429 249 dbSNP
rs1031451023 258 dbSNP
rs1436769424 260 dbSNP
rs1392040262 261 dbSNP
rs1259519304 274 dbSNP
rs549089422 277 dbSNP
rs1182394352 278 dbSNP
rs966741029 285 dbSNP
rs1190997320 286 dbSNP
rs1372277425 287 dbSNP
rs1047327 302 dbSNP
rs1172558752 303 dbSNP
rs1458409987 304 dbSNP
rs1469502172 306 dbSNP
rs1025023752 308 dbSNP
rs1014122961 309 dbSNP
rs1380997672 313 dbSNP
rs1047328 314 dbSNP
rs1327537347 316 dbSNP
rs895148438 318 dbSNP
rs143133035 319 dbSNP
rs1047329 320 dbSNP
rs1047331 322 dbSNP
rs1047332 323 dbSNP
rs397832539 326 dbSNP
rs773491580 340 dbSNP
rs1195514441 341 dbSNP
rs746526522 345 dbSNP
rs368174463 352 dbSNP
rs1426978893 354 dbSNP
rs183312759 363 dbSNP
rs1129449 366 dbSNP
rs1129450 367 dbSNP
rs1427964077 371 dbSNP
rs1177478342 375 dbSNP
rs1360950671 375 dbSNP
rs772270954 385 dbSNP
rs1190768848 389 dbSNP
rs551365922 390 dbSNP
rs906693036 391 dbSNP
rs1252835651 392 dbSNP
rs760171935 396 dbSNP
rs1025093780 400 dbSNP
rs533304761 411 dbSNP
rs1345331570 413 dbSNP
rs1004238561 423 dbSNP
rs1301627178 430 dbSNP
rs1489780848 432 dbSNP
rs887130162 434 dbSNP
rs912280051 435 dbSNP
rs192007464 438 dbSNP
rs1488552742 445 dbSNP
rs1218751301 446 dbSNP
rs1048357020 451 dbSNP
rs1490140889 465 dbSNP
rs550503239 475 dbSNP
rs199565382 477 dbSNP
rs1039944577 478 dbSNP
rs1158431413 482 dbSNP
rs1364503635 485 dbSNP
rs943924728 489 dbSNP
rs1422038026 493 dbSNP
rs528918673 494 dbSNP
rs1365337421 502 dbSNP
rs912375697 507 dbSNP
rs73624813 519 dbSNP
rs549679532 526 dbSNP
rs924548450 530 dbSNP
rs977192234 531 dbSNP
rs1296415102 536 dbSNP
rs1461368014 539 dbSNP
rs945756512 545 dbSNP
rs1024133705 547 dbSNP
rs1170559918 548 dbSNP
rs1433156557 549 dbSNP
rs1248279195 551 dbSNP
rs1479764904 561 dbSNP
rs914255275 570 dbSNP
rs989782592 579 dbSNP
rs111394915 580 dbSNP
rs1033978101 581 dbSNP
rs1441696016 582 dbSNP
rs112794863 583 dbSNP
rs995932498 589 dbSNP
rs560783482 590 dbSNP
rs531460789 592 dbSNP
rs578164447 598 dbSNP
rs1177153225 604 dbSNP
rs149212922 616 dbSNP
rs1274826282 617 dbSNP
rs1206669049 618 dbSNP
rs891296319 619 dbSNP
rs1376985155 623 dbSNP
rs1448262383 628 dbSNP
rs1004271216 630 dbSNP
rs1312309649 646 dbSNP
rs1381902459 647 dbSNP
rs1228864363 648 dbSNP
rs1051726182 649 dbSNP
rs1305610637 650 dbSNP
rs1204088526 655 dbSNP
rs951436488 657 dbSNP
rs537823856 661 dbSNP
rs1459271007 662 dbSNP
rs1279125749 664 dbSNP
rs1181777134 684 dbSNP
rs1242641595 686 dbSNP
rs1026950636 693 dbSNP
rs995479564 705 dbSNP
rs899829375 707 dbSNP
rs1304513952 713 dbSNP
rs1171833443 719 dbSNP
rs370664542 719 dbSNP
rs200104316 721 dbSNP
rs1448657789 723 dbSNP
rs1466893961 723 dbSNP
rs868415845 723 dbSNP
rs1359786415 724 dbSNP
rs1213715796 725 dbSNP
rs867904098 725 dbSNP
rs1351020146 727 dbSNP
rs1041545473 729 dbSNP
rs1202052178 729 dbSNP
rs1320220411 729 dbSNP
rs758954966 729 dbSNP
rs1194794311 731 dbSNP
rs142195228 731 dbSNP
rs771819322 731 dbSNP
rs573714551 732 dbSNP
rs747722587 733 dbSNP
rs78131947 733 dbSNP
rs1423850338 734 dbSNP
rs1399359294 735 dbSNP
rs1491040364 735 dbSNP
rs774434228 735 dbSNP
rs879494020 735 dbSNP
rs914286506 735 dbSNP
rs1221896974 737 dbSNP
rs1282952224 737 dbSNP
rs1342196049 737 dbSNP
rs1345979101 737 dbSNP
rs746382035 737 dbSNP
rs1374882317 738 dbSNP
rs1282270461 739 dbSNP
rs1446900926 739 dbSNP
rs555427803 739 dbSNP
rs879418688 739 dbSNP
rs1173397072 740 dbSNP
rs1265783169 740 dbSNP
rs1199153799 741 dbSNP
rs937058495 741 dbSNP
rs1467720026 742 dbSNP
rs1173781767 743 dbSNP
rs1245710091 743 dbSNP
rs1405212377 743 dbSNP
rs1478165372 743 dbSNP
rs1250658594 744 dbSNP
rs186849839 744 dbSNP
rs1159240964 745 dbSNP
rs1362209152 745 dbSNP
rs1362430708 745 dbSNP
rs1402796894 745 dbSNP
rs1158834920 746 dbSNP
rs1277833150 746 dbSNP
rs1438928298 746 dbSNP
rs1241501977 747 dbSNP
rs1288700558 747 dbSNP
rs1350121186 747 dbSNP
rs1357948457 747 dbSNP
rs1473240541 748 dbSNP
rs1222156302 749 dbSNP
rs1254567662 749 dbSNP
rs1451786665 749 dbSNP
rs1200609475 751 dbSNP
rs1230661029 751 dbSNP
rs1438605963 751 dbSNP
rs981068242 751 dbSNP
rs1382032585 752 dbSNP
rs1183765242 753 dbSNP
rs1422692035 753 dbSNP
rs1391250907 755 dbSNP
rs538247878 755 dbSNP
rs918096764 756 dbSNP
rs1244754263 757 dbSNP
rs1381179398 757 dbSNP
rs1447538956 757 dbSNP
rs781624891 757 dbSNP
rs1266378767 758 dbSNP
rs1358971326 759 dbSNP
rs982878053 759 dbSNP
rs1491188092 760 dbSNP
rs951467846 760 dbSNP
rs1239496007 761 dbSNP
rs1442677571 761 dbSNP
rs879870006 761 dbSNP
rs1186822781 762 dbSNP
rs1368828646 763 dbSNP
rs181723560 763 dbSNP
rs566327697 764 dbSNP
rs1333415476 765 dbSNP
rs1466368566 765 dbSNP
rs1484025597 765 dbSNP
rs1404059683 766 dbSNP
rs569240880 767 dbSNP
rs59601137 768 dbSNP
rs1225624867 769 dbSNP
rs1258803475 769 dbSNP
rs865959981 771 dbSNP
rs868508829 772 dbSNP
rs1238033643 773 dbSNP
rs1259415091 773 dbSNP
rs1329815388 774 dbSNP
rs539266143 775 dbSNP
rs199914690 776 dbSNP
rs1190713832 777 dbSNP
rs1290166960 777 dbSNP
rs1444090247 777 dbSNP
rs1231325732 779 dbSNP
rs58779673 780 dbSNP
rs750000855 780 dbSNP
rs1465546828 781 dbSNP
rs1491358310 781 dbSNP
rs1334843996 783 dbSNP
rs1279628033 784 dbSNP
rs1297935682 784 dbSNP
rs1341587950 784 dbSNP
rs1381053432 784 dbSNP
rs1491195962 784 dbSNP
rs1717063 784 dbSNP
rs200726370 784 dbSNP
rs35092477 784 dbSNP
rs71177428 784 dbSNP
rs1262183685 785 dbSNP
rs1347003171 785 dbSNP
rs1488531365 785 dbSNP
rs1491180213 785 dbSNP
rs1195577627 786 dbSNP
rs1398079903 786 dbSNP
rs1176829979 787 dbSNP
rs1383062276 787 dbSNP
rs751621663 787 dbSNP
rs185441221 788 dbSNP
rs1452231832 789 dbSNP
rs1158645129 790 dbSNP
rs1288710505 790 dbSNP
rs1361738130 791 dbSNP
rs1458066773 791 dbSNP
rs10417095 792 dbSNP
rs1301705574 793 dbSNP
rs1365008979 794 dbSNP
rs868748743 795 dbSNP
rs866811191 796 dbSNP
rs57457743 797 dbSNP
rs866386257 797 dbSNP
rs1237860454 798 dbSNP
rs59818635 798 dbSNP
rs1488260008 799 dbSNP
rs527267617 799 dbSNP
rs59685400 799 dbSNP
rs1475135048 800 dbSNP
rs1269555817 801 dbSNP
rs66685835 801 dbSNP
rs1437836420 802 dbSNP
rs1178115788 803 dbSNP
rs1381420896 805 dbSNP
rs1422099645 805 dbSNP
rs972949271 805 dbSNP
rs1349716044 807 dbSNP
rs962720594 807 dbSNP
rs1367451190 808 dbSNP
rs1293819066 809 dbSNP
rs867394505 809 dbSNP
rs1443858491 810 dbSNP
rs60442183 810 dbSNP
rs752955082 810 dbSNP
rs1223690290 811 dbSNP
rs12462303 811 dbSNP
rs1307921472 811 dbSNP
rs1238914154 812 dbSNP
rs376398560 813 dbSNP
rs867001904 813 dbSNP
rs1413524804 814 dbSNP
rs527376549 815 dbSNP
rs1424689237 816 dbSNP
rs1351206547 817 dbSNP
rs753838847 817 dbSNP
rs769313126 817 dbSNP
rs1463760333 819 dbSNP
rs149939896 820 dbSNP
rs1400452249 821 dbSNP
rs1448884540 821 dbSNP
rs879640781 822 dbSNP
rs1228625551 823 dbSNP
rs1282289408 823 dbSNP
rs1378369917 823 dbSNP
rs374260953 824 dbSNP
rs1258783519 825 dbSNP
rs1316264933 825 dbSNP
rs760131847 825 dbSNP
rs1443835557 826 dbSNP
rs1208113537 827 dbSNP
rs57460816 827 dbSNP
rs201644784 828 dbSNP
rs1183920660 829 dbSNP
rs1421980316 829 dbSNP
rs1483875639 829 dbSNP
rs1491109967 829 dbSNP
rs1169591619 831 dbSNP
rs1476623331 831 dbSNP
rs569105142 832 dbSNP
rs1411098706 833 dbSNP
rs201987321 833 dbSNP
rs1207663324 834 dbSNP
rs1304350477 835 dbSNP
rs1465197620 835 dbSNP
rs770161445 835 dbSNP
rs780895400 835 dbSNP
rs1269720274 836 dbSNP
rs1338228081 837 dbSNP
rs1491465499 837 dbSNP
rs374766545 837 dbSNP
rs1320283275 839 dbSNP
rs372081542 839 dbSNP
rs747453034 839 dbSNP
rs758863068 839 dbSNP
rs1355556038 840 dbSNP
rs1278040451 841 dbSNP
rs1212918241 843 dbSNP
rs1313262477 843 dbSNP
rs867778675 843 dbSNP
rs1194865516 845 dbSNP
rs1263396070 845 dbSNP
rs1488206138 845 dbSNP
rs1284919206 847 dbSNP
rs1423920593 847 dbSNP
rs1175515949 849 dbSNP
rs546043347 849 dbSNP
rs879562510 849 dbSNP
rs549545476 850 dbSNP
rs1247062476 851 dbSNP
rs1324946583 853 dbSNP
rs1418798407 855 dbSNP
rs891014492 856 dbSNP
rs1295166222 857 dbSNP
rs1328378258 861 dbSNP
rs1274310947 863 dbSNP
rs1434628649 863 dbSNP
rs1368470591 864 dbSNP
rs1221430161 867 dbSNP
rs1041578103 871 dbSNP
rs1217758768 871 dbSNP
rs1284418188 871 dbSNP
rs1288653134 871 dbSNP
rs1351862374 871 dbSNP
rs1353651570 871 dbSNP
rs1448350561 871 dbSNP
rs1436029767 875 dbSNP
rs1391309426 879 dbSNP
rs1324296831 884 dbSNP
rs550616653 895 dbSNP
rs138352626 896 dbSNP
rs1054237574 898 dbSNP
rs1323217067 899 dbSNP
rs1473509541 903 dbSNP
rs150453655 905 dbSNP
rs529486700 906 dbSNP
rs1187550808 916 dbSNP
rs541923555 917 dbSNP
rs1045780568 918 dbSNP
rs1191506274 939 dbSNP
rs377115736 941 dbSNP
rs370339497 942 dbSNP
rs982992506 943 dbSNP
rs1211523947 944 dbSNP
rs951582047 946 dbSNP
rs949994673 947 dbSNP
rs1451840994 949 dbSNP
rs920079986 950 dbSNP
rs188072560 959 dbSNP
rs1273938148 964 dbSNP
rs754792599 968 dbSNP
rs1018284908 971 dbSNP
rs1162445393 973 dbSNP
rs987168488 974 dbSNP
rs1463248384 981 dbSNP
rs750720175 985 dbSNP
rs974066527 992 dbSNP
rs1448166482 993 dbSNP
rs962693316 994 dbSNP
rs1015640249 997 dbSNP
rs867765252 998 dbSNP
rs1004448225 1000 dbSNP
rs1255588159 1001 dbSNP
rs1456982878 1004 dbSNP
rs1331999756 1009 dbSNP
rs1010146781 1010 dbSNP
rs1326131539 1013 dbSNP
rs767834793 1023 dbSNP
rs1186541557 1027 dbSNP
rs1368888371 1030 dbSNP
rs891412400 1032 dbSNP
rs893001520 1041 dbSNP
rs1476303227 1042 dbSNP
rs1033233541 1044 dbSNP
rs1423189918 1051 dbSNP
rs1466159048 1055 dbSNP
rs1029800888 1056 dbSNP
rs997441323 1060 dbSNP
rs1395995939 1068 dbSNP
rs1335248106 1069 dbSNP
rs1001303075 1073 dbSNP
rs1393694058 1074 dbSNP
rs1275839599 1078 dbSNP
rs1316935695 1082 dbSNP
rs945928996 1083 dbSNP
rs1227457907 1085 dbSNP
rs185210245 1094 dbSNP
rs1342758879 1095 dbSNP
rs1199861844 1096 dbSNP
rs935793122 1097 dbSNP
rs1045403269 1098 dbSNP
rs949759179 1099 dbSNP
rs886097095 1101 dbSNP
rs1041394146 1102 dbSNP
rs1376040626 1103 dbSNP
rs1465965698 1104 dbSNP
rs578128272 1112 dbSNP
rs930209705 1114 dbSNP
rs920107559 1127 dbSNP
rs1377803458 1128 dbSNP
rs1418190645 1131 dbSNP
rs140531195 1132 dbSNP
rs1247019625 1134 dbSNP
rs942803362 1137 dbSNP
rs544540904 1143 dbSNP
rs937180922 1144 dbSNP
rs1251248195 1147 dbSNP
rs1280889554 1148 dbSNP
rs986897759 1148 dbSNP
rs1344629513 1152 dbSNP
rs1214132106 1159 dbSNP
rs573677560 1165 dbSNP
rs146849445 1170 dbSNP
rs1486301890 1175 dbSNP
rs1218814767 1191 dbSNP
rs1020280499 1193 dbSNP
rs1265350068 1195 dbSNP
rs988742983 1208 dbSNP
rs1199687840 1217 dbSNP
rs1397374295 1218 dbSNP
rs957243576 1233 dbSNP
rs534019458 1241 dbSNP
rs1001733256 1248 dbSNP
rs1361639796 1252 dbSNP
rs1453993706 1262 dbSNP
rs905693143 1264 dbSNP
rs1290198745 1269 dbSNP
rs962808248 1282 dbSNP
rs1385687379 1291 dbSNP
rs112643404 1292 dbSNP
rs1237928311 1292 dbSNP
rs1453186540 1292 dbSNP
rs777045716 1292 dbSNP
rs1440731811 1293 dbSNP
rs1317363481 1298 dbSNP
rs1350398911 1298 dbSNP
rs1217680690 1301 dbSNP
rs1306929492 1309 dbSNP
rs1214355281 1321 dbSNP
rs1024507867 1325 dbSNP
rs1255004600 1330 dbSNP
rs1409873244 1332 dbSNP
rs1456813489 1333 dbSNP
rs1178637672 1334 dbSNP
rs1409362041 1342 dbSNP
rs1421195389 1343 dbSNP
rs1163152109 1351 dbSNP
rs982794025 1363 dbSNP
rs12982176 1372 dbSNP
rs1457133861 1374 dbSNP
rs879021416 1376 dbSNP
rs1325964876 1394 dbSNP
rs573248472 1397 dbSNP
rs1371829912 1398 dbSNP
rs1330513116 1404 dbSNP
rs955584654 1404 dbSNP
rs1373984125 1407 dbSNP
rs144028373 1414 dbSNP
rs1413496604 1418 dbSNP
rs1310351043 1431 dbSNP
rs539584458 1432 dbSNP
rs1321316020 1433 dbSNP
rs1030328496 1436 dbSNP
rs1275123066 1443 dbSNP
rs1456449021 1444 dbSNP
rs1198108452 1445 dbSNP
rs996990316 1446 dbSNP
rs886129593 1448 dbSNP
rs74174448 1450 dbSNP
rs1481926574 1452 dbSNP
rs79587492 1455 dbSNP
rs1255966478 1457 dbSNP
rs1474666081 1462 dbSNP
rs1174104378 1478 dbSNP
rs930235913 1483 dbSNP
rs763465877 1484 dbSNP
rs999889371 1486 dbSNP
rs1169365987 1487 dbSNP
rs1354996176 1490 dbSNP
rs1444341254 1491 dbSNP
rs898705775 1494 dbSNP
rs1038615783 1495 dbSNP
rs902953875 1496 dbSNP
rs1041343505 1499 dbSNP
rs1378256639 1500 dbSNP
rs1013880255 1504 dbSNP
rs895702091 1509 dbSNP
rs550870446 1512 dbSNP
rs560700637 1513 dbSNP
rs568052074 1516 dbSNP
rs1273857087 1517 dbSNP
rs1484089932 1522 dbSNP
rs911383574 1525 dbSNP
rs111777674 1527 dbSNP
rs1209683183 1528 dbSNP
rs1208708114 1538 dbSNP
rs1255763483 1542 dbSNP
rs934042068 1561 dbSNP
rs1190526900 1564 dbSNP
rs1037565822 1566 dbSNP
rs746218663 1567 dbSNP
rs988775426 1568 dbSNP
rs941396693 1569 dbSNP
rs528093602 1578 dbSNP
rs1299482915 1582 dbSNP
rs908645548 1583 dbSNP
rs1374786941 1585 dbSNP
rs957274545 1602 dbSNP
rs982741412 1603 dbSNP
rs1383949284 1606 dbSNP
rs1314528907 1608 dbSNP
rs925899702 1609 dbSNP
rs980035010 1610 dbSNP
rs146658283 1613 dbSNP
rs780584613 1616 dbSNP
rs1446924804 1628 dbSNP
rs552005552 1630 dbSNP
rs1024123044 1632 dbSNP
rs1301115068 1633 dbSNP
rs1349257936 1646 dbSNP
rs1213413675 1647 dbSNP
rs1284373268 1651 dbSNP
rs533557492 1651 dbSNP
rs758405087 1652 dbSNP
rs1335979413 1654 dbSNP
rs200734796 1674 dbSNP
rs964355802 1676 dbSNP
rs1033566367 1677 dbSNP
rs1159826125 1688 dbSNP
rs1188976293 1689 dbSNP
rs1394364482 1694 dbSNP
rs1013977921 1696 dbSNP
rs1454689934 1704 dbSNP
rs1175263674 1708 dbSNP
rs1473494016 1716 dbSNP
rs1358457306 1722 dbSNP
rs868501607 1726 dbSNP
rs1415856140 1728 dbSNP
rs1400331206 1729 dbSNP
rs1319146891 1733 dbSNP
rs1181337887 1744 dbSNP
rs950437165 1747 dbSNP
rs1025939030 1751 dbSNP
rs1434329926 1754 dbSNP
rs994502307 1761 dbSNP
rs1274366698 1763 dbSNP
rs1372322768 1764 dbSNP
rs776333157 1766 dbSNP
rs1307515752 1768 dbSNP
rs1000340447 1789 dbSNP
rs898825690 1791 dbSNP
rs1284461862 1792 dbSNP
rs1218707133 1793 dbSNP
rs1251892657 1794 dbSNP
rs1468852296 1814 dbSNP
rs562970739 1817 dbSNP
rs1013994618 1818 dbSNP
rs142085558 1821 dbSNP
rs1007126940 1831 dbSNP
rs544133087 1831 dbSNP
rs1269106036 1832 dbSNP
rs529585450 1837 dbSNP
rs1403855546 1840 dbSNP
rs1055487184 1841 dbSNP
rs1395387970 1842 dbSNP
rs1001842784 1862 dbSNP
rs899092497 1869 dbSNP
rs4805208 1870 dbSNP
rs781047714 1871 dbSNP
rs940507533 1874 dbSNP
rs1352362591 1875 dbSNP
rs1333335686 1876 dbSNP
rs1226311919 1878 dbSNP
rs1310033078 1882 dbSNP
rs1334852325 1883 dbSNP
rs1190640328 1887 dbSNP
rs1227213312 1890 dbSNP
rs1047170028 1893 dbSNP
rs908593183 1893 dbSNP
rs1437200826 1895 dbSNP
rs934115610 1899 dbSNP
rs1234445451 1900 dbSNP
rs1379208656 1902 dbSNP
rs148687405 1905 dbSNP
rs1418864326 1908 dbSNP
rs934070023 1911 dbSNP
rs975452478 1913 dbSNP
rs1387641790 1914 dbSNP
rs1396364481 1929 dbSNP
rs942923677 1931 dbSNP
rs573172108 1933 dbSNP
rs1348023883 1961 dbSNP
rs756982023 1965 dbSNP
rs1406059481 1969 dbSNP
rs967512861 1973 dbSNP
rs1020448348 1978 dbSNP
rs992516411 1979 dbSNP
rs959843967 1983 dbSNP
rs1185011697 1997 dbSNP
rs1274854865 2006 dbSNP
rs866450203 2007 dbSNP
rs1001226366 2009 dbSNP
rs1258441307 2011 dbSNP
rs1191567598 2028 dbSNP
rs1372633683 2032 dbSNP
rs899038069 2033 dbSNP
rs558216788 2054 dbSNP
rs1004835826 2055 dbSNP
rs925962565 2057 dbSNP
rs1265400621 2067 dbSNP
rs980450241 2077 dbSNP
rs1313907297 2086 dbSNP
rs1222886050 2088 dbSNP
rs1375648306 2097 dbSNP
rs969976852 2099 dbSNP
rs1051627607 2108 dbSNP
rs1325414452 2115 dbSNP
rs1227526304 2118 dbSNP
rs1271808614 2125 dbSNP
rs1345681150 2126 dbSNP
rs1225807679 2129 dbSNP
rs1280838758 2132 dbSNP
rs546007234 2134 dbSNP
rs1214805376 2136 dbSNP
rs917078553 2143 dbSNP
rs1436971561 2149 dbSNP
rs1195453320 2160 dbSNP
rs1286557719 2165 dbSNP
rs182253104 2168 dbSNP
rs934041036 2172 dbSNP
rs56330606 2176 dbSNP
rs1174635027 2183 dbSNP
rs1040073802 2191 dbSNP
rs1436195717 2195 dbSNP
rs950551723 2196 dbSNP
rs925990942 2203 dbSNP
rs557232494 2204 dbSNP
rs994533983 2205 dbSNP
rs1166795841 2209 dbSNP
rs1233546703 2212 dbSNP
rs913387494 2217 dbSNP
rs748161537 2233 dbSNP
rs1349693667 2234 dbSNP
rs963400432 2236 dbSNP
rs1260317456 2243 dbSNP
rs960031968 2248 dbSNP
rs1206944226 2249 dbSNP
rs1017249031 2250 dbSNP
rs73624806 2257 dbSNP
rs890007045 2263 dbSNP
rs1170670937 2269 dbSNP
rs539484484 2270 dbSNP
rs1051265791 2281 dbSNP
rs1397436140 2291 dbSNP
rs998392668 2295 dbSNP
rs1431820654 2298 dbSNP
rs891959606 2299 dbSNP
rs1053221944 2306 dbSNP
rs1267036600 2308 dbSNP
rs1438158642 2333 dbSNP
rs1158876997 2337 dbSNP
rs1362827620 2340 dbSNP
rs1454036692 2344 dbSNP
rs1159779065 2349 dbSNP
rs568312541 2356 dbSNP
rs574613302 2357 dbSNP
rs925964875 2371 dbSNP
rs1044374214 2377 dbSNP
rs4805207 2396 dbSNP
rs144097649 2397 dbSNP
rs570388875 2404 dbSNP
rs1317723585 2412 dbSNP
rs1241521517 2413 dbSNP
rs369818516 2420 dbSNP
rs376010339 2421 dbSNP
rs1341068661 2426 dbSNP
rs112617373 2435 dbSNP
rs1030146357 2436 dbSNP
rs1255390567 2439 dbSNP
rs1479966683 2443 dbSNP
rs929170898 2448 dbSNP
rs1251760393 2454 dbSNP
rs139635310 2466 dbSNP
rs1160836682 2473 dbSNP
rs1039785544 2475 dbSNP
rs147408614 2478 dbSNP
rs963134112 2479 dbSNP
rs1369629898 2486 dbSNP
rs1396561168 2494 dbSNP
rs1460449702 2519 dbSNP
rs1297384209 2521 dbSNP
rs1373873597 2526 dbSNP
rs1392926283 2527 dbSNP
rs371084713 2530 dbSNP
rs1291605696 2531 dbSNP
rs1369864200 2532 dbSNP
rs762503577 2538 dbSNP
rs1043066354 2547 dbSNP
rs1275179948 2557 dbSNP
rs1409318498 2580 dbSNP
rs1306254206 2584 dbSNP
rs1204516466 2586 dbSNP
rs143091968 2595 dbSNP
rs1481788793 2599 dbSNP
rs1310096740 2600 dbSNP
rs1186277754 2604 dbSNP
rs139171470 2606 dbSNP
rs113531240 2609 dbSNP
rs1188023902 2623 dbSNP
rs1177225284 2624 dbSNP
rs553871865 2626 dbSNP
rs938870977 2633 dbSNP
rs1426661083 2636 dbSNP
rs1435473529 2651 dbSNP
rs757441884 2653 dbSNP
rs927486515 2663 dbSNP
rs1182040346 2668 dbSNP
rs979872179 2671 dbSNP
rs540558811 2681 dbSNP
rs1482456098 2702 dbSNP
rs141861707 2715 dbSNP
rs891992074 2728 dbSNP
rs1197187531 2732 dbSNP
rs751611853 2738 dbSNP
rs764193391 2740 dbSNP
rs534557576 2752 dbSNP
rs1482071160 2767 dbSNP
rs1296857161 2781 dbSNP
rs908851140 2784 dbSNP
rs1031819852 2789 dbSNP
rs1280134202 2806 dbSNP
rs148089544 2807 dbSNP
rs904568013 2811 dbSNP
rs1211245469 2822 dbSNP
rs1238849160 2825 dbSNP
rs950575046 2829 dbSNP
rs1474108686 2831 dbSNP
rs1233680811 2854 dbSNP
rs1030258425 2857 dbSNP
rs1451306718 2880 dbSNP
rs776035804 2892 dbSNP
rs546267148 2898 dbSNP
rs1394319934 2900 dbSNP
rs1435108351 2908 dbSNP
rs1313923812 2911 dbSNP
rs765728962 2914 dbSNP
rs997879431 2917 dbSNP
rs1430053362 2927 dbSNP
rs772826154 2932 dbSNP
rs948783254 2933 dbSNP
rs1289559521 2934 dbSNP
rs895809447 2941 dbSNP
rs1364676262 2944 dbSNP
rs1232821850 2954 dbSNP
rs1303128451 2970 dbSNP
rs1351185597 2974 dbSNP
rs1290281192 2975 dbSNP
rs1057002454 2994 dbSNP
rs575606890 2999 dbSNP
rs557491604 3001 dbSNP
rs929203445 3005 dbSNP
rs1401739835 3006 dbSNP
rs1280241984 3011 dbSNP
rs919106538 3012 dbSNP
rs542015521 3013 dbSNP
rs964574703 3018 dbSNP
rs1386849416 3024 dbSNP
rs941775921 3028 dbSNP
rs1466196024 3032 dbSNP
rs1159093638 3040 dbSNP
rs1252310918 3048 dbSNP
rs1454512125 3050 dbSNP
rs910339276 3052 dbSNP
rs986273872 3053 dbSNP
rs954388491 3059 dbSNP
rs1421742882 3060 dbSNP
rs1391013474 3072 dbSNP
rs1438811899 3077 dbSNP
rs1255013057 3079 dbSNP
rs1325754125 3088 dbSNP
rs1043013250 3090 dbSNP
rs1029982801 3093 dbSNP
rs1443515688 3095 dbSNP
rs1010193253 3097 dbSNP
rs1348083819 3098 dbSNP
rs1222918699 3106 dbSNP
rs1284522719 3107 dbSNP
rs977020281 3109 dbSNP
rs1211300512 3111 dbSNP
rs1272427241 3116 dbSNP
rs1468889959 3118 dbSNP
rs759899670 3119 dbSNP
rs1057372269 3121 dbSNP
rs574701883 3129 dbSNP
rs1177935193 3136 dbSNP
rs938969598 3143 dbSNP
rs1459897047 3145 dbSNP
rs1164341921 3148 dbSNP
rs1395820490 3159 dbSNP
rs1407623326 3160 dbSNP
rs1327260563 3166 dbSNP
rs927465525 3169 dbSNP
rs1443402935 3173 dbSNP
rs1288534632 3180 dbSNP
rs1208097978 3186 dbSNP
rs1031852124 3188 dbSNP
rs371443546 3190 dbSNP
rs941738182 3198 dbSNP
rs908964605 3199 dbSNP
rs1329760305 3201 dbSNP
rs1270807294 3202 dbSNP
rs567923064 3203 dbSNP
rs950357700 3206 dbSNP
rs1474373321 3207 dbSNP
rs143794503 3210 dbSNP
rs1136117 3213 dbSNP
rs1339904444 3214 dbSNP
rs1418749994 3215 dbSNP
rs1473819047 3221 dbSNP
rs976009228 3228 dbSNP
rs1396439674 3230 dbSNP
rs1023078909 3231 dbSNP
rs1410838325 3238 dbSNP
rs1313732929 3245 dbSNP
rs1013401392 3256 dbSNP
rs1017406862 3264 dbSNP
rs1292131327 3267 dbSNP
rs1340480709 3270 dbSNP
rs895840659 3278 dbSNP
rs1057033274 3279 dbSNP
rs1338702811 3283 dbSNP
rs1228828793 3290 dbSNP
rs1276571213 3300 dbSNP
rs929236034 3308 dbSNP
rs1210353615 3317 dbSNP
rs1258501740 3318 dbSNP
rs149013513 3319 dbSNP
rs1159839887 3325 dbSNP
rs897704780 3331 dbSNP
rs1455964246 3332 dbSNP
rs1038017592 3333 dbSNP
rs113236680 3335 dbSNP
rs1021671495 3336 dbSNP
rs1476053186 3339 dbSNP
rs1170858904 3340 dbSNP
rs375934104 3342 dbSNP
rs1050206290 3346 dbSNP
rs558310315 3349 dbSNP
rs113145524 3350 dbSNP
rs369056206 3351 dbSNP
rs1397227905 3355 dbSNP
rs776426472 3356 dbSNP
rs922944604 3360 dbSNP
rs753644994 3364 dbSNP
rs547228286 3366 dbSNP
rs1299735592 3367 dbSNP
rs906128344 3368 dbSNP
rs1233321308 3371 dbSNP
rs956357437 3372 dbSNP
rs924923927 3374 dbSNP
rs979412175 3379 dbSNP
rs968939337 3383 dbSNP
rs1207935790 3398 dbSNP
rs533428244 3400 dbSNP
rs1355747899 3408 dbSNP
rs1023529888 3433 dbSNP
rs772713669 3434 dbSNP
rs868139889 3436 dbSNP
rs1454074896 3445 dbSNP
rs929065258 3448 dbSNP
rs569365962 3450 dbSNP
rs1248527826 3477 dbSNP
rs1377814207 3479 dbSNP
rs1012965810 3493 dbSNP
rs1467304099 3499 dbSNP
rs922950439 3500 dbSNP
rs1297394014 3505 dbSNP
rs1436243781 3510 dbSNP
rs976164222 3511 dbSNP
rs1322402518 3513 dbSNP
rs1367748869 3514 dbSNP
rs1322158544 3515 dbSNP
rs1368739729 3515 dbSNP
rs75715934 3516 dbSNP
rs75156459 3517 dbSNP
rs943274860 3519 dbSNP
rs1301774104 3526 dbSNP
rs910460595 3528 dbSNP
rs77733118 3529 dbSNP
rs979198419 3530 dbSNP
rs1020783785 3531 dbSNP
rs1414520426 3531 dbSNP
rs1434540177 3531 dbSNP
rs1491081079 3531 dbSNP
rs35315978 3531 dbSNP
rs397729598 3531 dbSNP
rs950209243 3531 dbSNP
rs967847008 3531 dbSNP
rs1389465601 3532 dbSNP
rs1163315684 3533 dbSNP
rs1426215115 3534 dbSNP
rs1160793959 3537 dbSNP
rs1387904388 3537 dbSNP
rs988836896 3545 dbSNP
rs1293888952 3549 dbSNP
rs1369374615 3552 dbSNP
rs1389477185 3556 dbSNP
rs1167525878 3563 dbSNP
rs960077609 3564 dbSNP
rs1449869881 3566 dbSNP
rs1243575051 3572 dbSNP
rs1035654045 3573 dbSNP
rs1230274252 3580 dbSNP
rs547903976 3605 dbSNP
rs1196674537 3611 dbSNP
rs1267764031 3615 dbSNP
rs897824313 3621 dbSNP
rs1195617968 3622 dbSNP
rs1037655820 3624 dbSNP
rs1472742286 3629 dbSNP
rs1183693476 3639 dbSNP
rs1268216739 3642 dbSNP
rs535636368 3644 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguAGAAGGAAGUCGGAg 5'
             || | | ||||||| 
Target 5' uucUCCUGCCUCAGCCUc 3'
1 - 18
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084045. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gguAGAAGGAAGUCGGAg 5'
             || | | ||||||| 
Target 5' uucUCCUGCCUCAGCCUc 3'
1 - 18
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_152279 | 3UTR | AACCUCCGUCUCCCGGGCUCAAGCAAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGAUUGCGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_152279 | 3UTR | CCCGGGCUCAAGCAAUUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGAUUGCGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000532828.2 | 3UTR | UUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGAUUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1084045
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep3
Location of target site ENST00000532828.2 | 3UTR | UUCUCCUGCCUCAGCCUCCUGAGUAGCUGGGAUUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

Error report submission