pre-miRNA Information
pre-miRNA hsa-mir-5691   
Genomic Coordinates chr11: 9090312 - 9090379
Description Homo sapiens miR-5691 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-5691
Sequence 9| UUGCUCUGAGCUCCGAGAAAGC |30
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1042238449 3 dbSNP
rs554804494 11 dbSNP
rs1172229307 13 dbSNP
rs112511786 14 dbSNP
Putative Targets

Gene Information
Gene Symbol UBE2V2   
Synonyms DDVIT1, DDVit-1, EDAF-1, EDPF-1, EDPF1, MMS2, UEV-2, UEV2
Description ubiquitin conjugating enzyme E2 V2
Transcript NM_003350   
Expression
Putative miRNA Targets on UBE2V2
3'UTR of UBE2V2
(miRNA target sites are highlighted)
>UBE2V2|NM_003350|3'UTR
   1 TTTTAGTGGATCTCAAACTTGTCTTAAATCAACAACCTTCTACTCATGTTAATGTCTTGATTAAATATCACAATGCAAAA
  81 TACACATTAAGTAAAAGAATTCCAGCTGGTAAACATGACCTGGACATTTGTAAGAATATATTTAATATATGTACACCCAT
 161 TATGTTTTCAGGTAACAGGAGGAAAAATGCAGCACAATTTTTTTTCTCTTGAAAGGCACTGTCATTTAAACATAAACCTG
 241 GAGTACTCGAAATAGAATTCAGGTTTACAAGATGAAAGCGTGTGGAGAAGTGTCAGATGGCAGTGGAAGCATGTGTGTTT
 321 CTAAAAAGTAAAAATCTCAAGAAAACAGAAATGGCATGCTTTACCCATCTTACTTAGTGAAAGAGAGCTGCAGTTGAAAT
 401 TGTTTAAAAAGTAGCAGGTACAATGAATATTGTCACAGATGTGTTAATTTTTGAAGCAATGTGGGTGCTGACTACTAGTA
 481 GTATCAAAAATATGTTCAGGATTGTTTTGATACCTGTATTTATAATAAAAAATGTTGGGGGGAGTTGATGAATTCCTGTT
 561 AAAAGCTGTTCTTGTGTGTTACATGTAACAGACATGGTAAATATTTGTTTACAGTCTTTGTTTAACAAACCATGCATTTA
 641 AGTTTAAGTGAAGTCAACAAAAAGGAAATAGGTGTATGGATATGTGATTTTGAGATTAAAGTTAGTCTTAAAATGTAAAT
 721 AAAATGTGAAACGTGTCCTCAGAGACTGTGCCATTTCTATTATGTTGATGTATATGTACAGTACCTTGCCAGGGAAGCAA
 801 AAATTGGAATTATTGTAGCTTTTCATGTATACACACTTTTATTTACCCTATTTTGTGTACTTCTTGTGAATTATAATTTG
 881 CAGACTATTTCAGAAAAGAAATTATCTAGTTTAATTTCTTCTTTGGACAAGGAGTCCTAGGTATTATATTTTGAGTTTGA
 961 TTTCACCAGAAATAATAATATTAAAAAGATCTTTGCATTCTGGCAGTTCTTTTAGGATTATAGGTTGCAAATTATCCAAA
1041 TATATATCCCATTTTTTAAAGCATAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' cgaaagaGC-CUCGAGUCUCguu 5'
                 || |  |||||||   
Target 5' tgtgaaaCGTGTCCTCAGAGact 3'
725 - 747 111.00 -13.22
2
miRNA  3' cgaaagagCCUCG-AGUCU--CGUu 5'
                  | ||: |||||  ||| 
Target 5' cgtgtggaGAAGTGTCAGATGGCAg 3'
279 - 303 110.00 -13.00
3
miRNA  3' cgaAAGAGC-CUCGA--------GUCUCGUu 5'
             ||||:| || :|        |||| :| 
Target 5' tacTTCTTGTGAATTATAATTTGCAGACTAt 3'
858 - 888 101.00 -8.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30476801 38 COSMIC
COSN30519831 46 COSMIC
COSN30517697 81 COSMIC
COSN31520477 98 COSMIC
COSN30108282 100 COSMIC
COSN30528039 105 COSMIC
COSN29467580 131 COSMIC
COSN31571204 167 COSMIC
COSN25321963 206 COSMIC
COSN32056709 341 COSMIC
COSN28713981 415 COSMIC
COSN24294970 416 COSMIC
COSN28000914 607 COSMIC
COSN31549133 661 COSMIC
COSN30173162 679 COSMIC
COSN5682271 789 COSMIC
COSN24849479 841 COSMIC
COSN25832949 933 COSMIC
COSN7672905 1257 COSMIC
COSN32206436 1282 COSMIC
COSN15946663 1338 COSMIC
COSN5682272 1801 COSMIC
COSN5682273 1802 COSMIC
COSN21125038 2331 COSMIC
COSN14857094 2701 COSMIC
COSN21495302 3387 COSMIC
COSN22225669 3658 COSMIC
COSN24486568 3878 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs371159992 5 dbSNP
rs1264525153 7 dbSNP
rs1442473594 13 dbSNP
rs376218408 17 dbSNP
rs890290668 24 dbSNP
rs762169378 30 dbSNP
rs1476161947 32 dbSNP
rs1008651384 33 dbSNP
rs762050813 34 dbSNP
rs1355116668 38 dbSNP
rs765594550 47 dbSNP
rs750772816 52 dbSNP
rs1297134536 56 dbSNP
rs1450143340 65 dbSNP
rs985727017 70 dbSNP
rs1036294088 74 dbSNP
rs1400426072 77 dbSNP
rs1334364827 81 dbSNP
rs1381549773 84 dbSNP
rs1161631321 86 dbSNP
rs1453166224 98 dbSNP
rs577591508 110 dbSNP
rs1403809401 126 dbSNP
rs544867184 137 dbSNP
rs1305731167 149 dbSNP
rs1226527412 150 dbSNP
rs994744945 151 dbSNP
rs1340223576 155 dbSNP
rs1200596436 163 dbSNP
rs1027762123 170 dbSNP
rs1043351303 175 dbSNP
rs11557782 176 dbSNP
rs1241572921 191 dbSNP
rs903132458 196 dbSNP
rs1461018287 198 dbSNP
rs934476641 200 dbSNP
rs1184612330 209 dbSNP
rs1265785106 219 dbSNP
rs372034076 223 dbSNP
rs1218927173 228 dbSNP
rs969033097 230 dbSNP
rs769651262 232 dbSNP
rs11557790 235 dbSNP
rs11557777 237 dbSNP
rs1427261564 239 dbSNP
rs748387896 247 dbSNP
rs1045062706 249 dbSNP
rs556752946 250 dbSNP
rs960870727 253 dbSNP
rs1463106508 256 dbSNP
rs1291508576 264 dbSNP
rs988286570 273 dbSNP
rs1349468914 280 dbSNP
rs914057472 281 dbSNP
rs968736447 284 dbSNP
rs979701635 292 dbSNP
rs993589415 297 dbSNP
rs1426247174 301 dbSNP
rs921305078 308 dbSNP
rs1189790946 310 dbSNP
rs932615838 311 dbSNP
rs1359539055 314 dbSNP
rs1381429363 316 dbSNP
rs1246966528 326 dbSNP
rs1223283230 335 dbSNP
rs575247717 340 dbSNP
rs1328094977 343 dbSNP
rs1256864670 352 dbSNP
rs1199202472 357 dbSNP
rs1220593533 358 dbSNP
rs1298956942 359 dbSNP
rs772057566 365 dbSNP
rs1261279344 369 dbSNP
rs912617022 370 dbSNP
rs769568434 378 dbSNP
rs1204475262 382 dbSNP
rs1275719487 396 dbSNP
rs1443368512 410 dbSNP
rs1398204216 411 dbSNP
rs1330690644 415 dbSNP
rs1466619682 417 dbSNP
rs1036627458 433 dbSNP
rs1356746905 437 dbSNP
rs954435027 439 dbSNP
rs1433017574 440 dbSNP
rs542678804 450 dbSNP
rs1195185832 460 dbSNP
rs910329398 464 dbSNP
rs1263110908 476 dbSNP
rs1178665310 479 dbSNP
rs995195158 482 dbSNP
rs1196691648 483 dbSNP
rs968779224 486 dbSNP
rs978487645 489 dbSNP
rs367816288 493 dbSNP
rs934571714 495 dbSNP
rs1236781255 512 dbSNP
rs1374883576 516 dbSNP
rs1056955926 527 dbSNP
rs1407520759 530 dbSNP
rs542153142 535 dbSNP
rs1375595262 537 dbSNP
rs1301664554 540 dbSNP
rs1465976101 543 dbSNP
rs1360114275 544 dbSNP
rs1001834739 574 dbSNP
rs528119669 579 dbSNP
rs1387072086 584 dbSNP
rs896262993 585 dbSNP
rs1379265795 586 dbSNP
rs1045544001 595 dbSNP
rs1420410917 610 dbSNP
rs1253451097 612 dbSNP
rs192523393 616 dbSNP
rs760542623 617 dbSNP
rs1239008610 621 dbSNP
rs1006633122 624 dbSNP
rs1352671011 626 dbSNP
rs1285636376 630 dbSNP
rs775688205 633 dbSNP
rs968242921 636 dbSNP
rs543184031 637 dbSNP
rs898051008 641 dbSNP
rs980095510 650 dbSNP
rs1028498310 651 dbSNP
rs1315225525 657 dbSNP
rs954058908 661 dbSNP
rs185414068 665 dbSNP
rs1315328892 669 dbSNP
rs1007715412 673 dbSNP
rs912544839 675 dbSNP
rs1424357680 688 dbSNP
rs1419984137 696 dbSNP
rs940136506 707 dbSNP
rs978799996 711 dbSNP
rs1261640517 726 dbSNP
rs770882780 727 dbSNP
rs924314253 730 dbSNP
rs972834284 733 dbSNP
rs190316768 734 dbSNP
rs930452611 736 dbSNP
rs111970691 737 dbSNP
rs1486939046 738 dbSNP
rs1268786500 739 dbSNP
rs992725576 747 dbSNP
rs917200331 749 dbSNP
rs1192395855 760 dbSNP
rs905080573 763 dbSNP
rs1295708085 764 dbSNP
rs1405400703 773 dbSNP
rs1418095436 775 dbSNP
rs937895150 780 dbSNP
rs550372480 782 dbSNP
rs1388078351 788 dbSNP
rs150635263 792 dbSNP
rs1458011901 795 dbSNP
rs1009772351 806 dbSNP
rs1168531127 809 dbSNP
rs1396014711 809 dbSNP
rs1020663995 811 dbSNP
rs1424090271 816 dbSNP
rs1195003147 828 dbSNP
rs926663074 835 dbSNP
rs904029004 841 dbSNP
rs1209446340 842 dbSNP
rs1302532128 847 dbSNP
rs1366109829 856 dbSNP
rs1001012554 857 dbSNP
rs1038079636 860 dbSNP
rs1197313366 867 dbSNP
rs139745516 875 dbSNP
rs954318093 888 dbSNP
rs986999184 901 dbSNP
rs1230121832 905 dbSNP
rs1051957722 908 dbSNP
rs890746266 923 dbSNP
rs1019606380 936 dbSNP
rs1300233403 937 dbSNP
rs1371492850 940 dbSNP
rs961397717 955 dbSNP
rs1008100261 956 dbSNP
rs1308181552 961 dbSNP
rs973229539 961 dbSNP
rs1017778931 983 dbSNP
rs919985548 984 dbSNP
rs1465061082 990 dbSNP
rs548629486 1005 dbSNP
rs566839507 1007 dbSNP
rs904241370 1013 dbSNP
rs930483242 1019 dbSNP
rs984648595 1022 dbSNP
rs1376845823 1023 dbSNP
rs1198512909 1025 dbSNP
rs774308504 1032 dbSNP
rs1454826555 1035 dbSNP
rs1291745554 1038 dbSNP
rs560713482 1047 dbSNP
rs1490649101 1048 dbSNP
rs764099916 1050 dbSNP
rs1274379733 1064 dbSNP
rs1056394926 1065 dbSNP
rs1198060233 1067 dbSNP
rs955678902 1071 dbSNP
rs1255704715 1072 dbSNP
rs1234587312 1075 dbSNP
rs1372659627 1081 dbSNP
rs1223155024 1084 dbSNP
rs992528091 1091 dbSNP
rs896156801 1094 dbSNP
rs1376967525 1099 dbSNP
rs558990647 1108 dbSNP
rs1042545906 1116 dbSNP
rs776575223 1120 dbSNP
rs1177366543 1124 dbSNP
rs571204011 1129 dbSNP
rs1381765821 1133 dbSNP
rs1397156303 1136 dbSNP
rs538491437 1139 dbSNP
rs1439224921 1142 dbSNP
rs1233518834 1143 dbSNP
rs79392569 1144 dbSNP
rs909731059 1158 dbSNP
rs1255930748 1160 dbSNP
rs1049912706 1162 dbSNP
rs942089268 1164 dbSNP
rs1162662824 1173 dbSNP
rs574939719 1188 dbSNP
rs562020624 1197 dbSNP
rs531756930 1200 dbSNP
rs889943348 1213 dbSNP
rs1406977899 1214 dbSNP
rs1280724116 1216 dbSNP
rs1445758664 1220 dbSNP
rs1339759771 1224 dbSNP
rs10808897 1229 dbSNP
rs929303298 1237 dbSNP
rs554677180 1242 dbSNP
rs890672614 1243 dbSNP
rs1419256267 1250 dbSNP
rs1408822589 1253 dbSNP
rs943646192 1257 dbSNP
rs767071320 1259 dbSNP
rs146350020 1260 dbSNP
rs1368437895 1265 dbSNP
rs1379361550 1276 dbSNP
rs1189243649 1280 dbSNP
rs181825737 1288 dbSNP
rs994151592 1291 dbSNP
rs1275696669 1295 dbSNP
rs1027500571 1302 dbSNP
rs185216991 1311 dbSNP
rs1215455138 1328 dbSNP
rs763376787 1329 dbSNP
rs1447163851 1330 dbSNP
rs766916316 1343 dbSNP
rs532278037 1347 dbSNP
rs1314735643 1348 dbSNP
rs1360828314 1351 dbSNP
rs1293890712 1355 dbSNP
rs1230458675 1360 dbSNP
rs1270287770 1365 dbSNP
rs1338149599 1367 dbSNP
rs959156231 1378 dbSNP
rs1306471220 1380 dbSNP
rs2382637 1381 dbSNP
rs45500093 1382 dbSNP
rs1345969963 1383 dbSNP
rs1320498282 1395 dbSNP
rs1403726742 1412 dbSNP
rs1393815192 1413 dbSNP
rs1166376305 1414 dbSNP
rs1476436525 1421 dbSNP
rs562557370 1422 dbSNP
rs992084811 1439 dbSNP
rs1239663330 1446 dbSNP
rs1475925750 1453 dbSNP
rs917813536 1455 dbSNP
rs1218906877 1457 dbSNP
rs1459663437 1461 dbSNP
rs529936716 1464 dbSNP
rs1042079321 1470 dbSNP
rs1215499712 1473 dbSNP
rs1315934797 1474 dbSNP
rs1277373453 1477 dbSNP
rs924926289 1479 dbSNP
rs1182791535 1489 dbSNP
rs548061842 1505 dbSNP
rs531168635 1506 dbSNP
rs1013889874 1508 dbSNP
rs1023987187 1511 dbSNP
rs1326643622 1513 dbSNP
rs1184773806 1514 dbSNP
rs1463517719 1517 dbSNP
rs889952881 1525 dbSNP
rs188832358 1534 dbSNP
rs181267749 1535 dbSNP
rs1171453618 1536 dbSNP
rs1402754688 1538 dbSNP
rs1468389635 1539 dbSNP
rs897380268 1541 dbSNP
rs1017290957 1555 dbSNP
rs369991185 1556 dbSNP
rs752174750 1559 dbSNP
rs1194928763 1564 dbSNP
rs952822813 1581 dbSNP
rs1456039612 1585 dbSNP
rs369888524 1586 dbSNP
rs973015462 1590 dbSNP
rs919303133 1591 dbSNP
rs1001625320 1596 dbSNP
rs538551241 1597 dbSNP
rs1309042086 1604 dbSNP
rs34816902 1610 dbSNP
rs564659098 1627 dbSNP
rs1268998248 1629 dbSNP
rs550481086 1630 dbSNP
rs1217746437 1640 dbSNP
rs1361831393 1643 dbSNP
rs1304303203 1644 dbSNP
rs929399659 1647 dbSNP
rs1214695184 1652 dbSNP
rs959206475 1655 dbSNP
rs911910529 1658 dbSNP
rs991969921 1659 dbSNP
rs917725978 1673 dbSNP
rs1039274320 1682 dbSNP
rs1174373385 1691 dbSNP
rs966679887 1692 dbSNP
rs926233258 1696 dbSNP
rs978404691 1709 dbSNP
rs1263362706 1711 dbSNP
rs1443995698 1715 dbSNP
rs1213350418 1717 dbSNP
rs925010992 1718 dbSNP
rs752387998 1720 dbSNP
rs1194511894 1723 dbSNP
rs1485850907 1724 dbSNP
rs1425780422 1725 dbSNP
rs1281329153 1726 dbSNP
rs936180752 1729 dbSNP
rs760246649 1730 dbSNP
rs1351688757 1744 dbSNP
rs1306371495 1749 dbSNP
rs1045286491 1753 dbSNP
rs1224876746 1755 dbSNP
rs1376129222 1756 dbSNP
rs1301564594 1758 dbSNP
rs1414577007 1759 dbSNP
rs1159162748 1760 dbSNP
rs1314335701 1760 dbSNP
rs1362768180 1760 dbSNP
rs1376384566 1760 dbSNP
rs1420845411 1760 dbSNP
rs398007693 1760 dbSNP
rs548374170 1760 dbSNP
rs5891261 1760 dbSNP
rs77760078 1760 dbSNP
rs869100631 1760 dbSNP
rs936301597 1771 dbSNP
rs1479585234 1772 dbSNP
rs1049475031 1774 dbSNP
rs1187071140 1775 dbSNP
rs1053284358 1777 dbSNP
rs376092318 1777 dbSNP
rs796996576 1778 dbSNP
rs751429745 1784 dbSNP
rs1487419073 1785 dbSNP
rs910939656 1786 dbSNP
rs891517157 1802 dbSNP
rs755703995 1804 dbSNP
rs1233137867 1807 dbSNP
rs1014028322 1810 dbSNP
rs765590317 1817 dbSNP
rs568637802 1819 dbSNP
rs897309211 1820 dbSNP
rs1383751402 1821 dbSNP
rs1289042344 1833 dbSNP
rs905511726 1845 dbSNP
rs1316650242 1852 dbSNP
rs1345152440 1853 dbSNP
rs1001639688 1857 dbSNP
rs930283875 1876 dbSNP
rs1164212657 1877 dbSNP
rs536093047 1881 dbSNP
rs1419825436 1887 dbSNP
rs1279558386 1898 dbSNP
rs1427662315 1902 dbSNP
rs962948626 1902 dbSNP
rs1047604 1903 dbSNP
rs1187274007 1919 dbSNP
rs993926715 1942 dbSNP
rs372398366 1944 dbSNP
rs1025443319 1952 dbSNP
rs1213684191 1958 dbSNP
rs1222373189 1960 dbSNP
rs1336078004 1964 dbSNP
rs950778657 1973 dbSNP
rs888463989 1974 dbSNP
rs1346663495 1982 dbSNP
rs1383560157 1983 dbSNP
rs1364951955 1985 dbSNP
rs1324610699 1992 dbSNP
rs1461933073 2002 dbSNP
rs1396641514 2008 dbSNP
rs1168390142 2017 dbSNP
rs139696840 2017 dbSNP
rs911992637 2019 dbSNP
rs1373366875 2020 dbSNP
rs1001507782 2021 dbSNP
rs964733359 2021 dbSNP
rs1034452587 2025 dbSNP
rs895929097 2026 dbSNP
rs1251271818 2036 dbSNP
rs1014335975 2038 dbSNP
rs1024842389 2040 dbSNP
rs572611847 2041 dbSNP
rs1255463640 2047 dbSNP
rs1194522706 2048 dbSNP
rs1339219105 2048 dbSNP
rs936259625 2051 dbSNP
rs1053251690 2054 dbSNP
rs532028179 2080 dbSNP
rs533598168 2084 dbSNP
rs978037136 2087 dbSNP
rs1302189402 2106 dbSNP
rs1266664434 2112 dbSNP
rs913421913 2116 dbSNP
rs1372468447 2122 dbSNP
rs144501095 2123 dbSNP
rs1390744910 2129 dbSNP
rs1397018801 2130 dbSNP
rs45588533 2132 dbSNP
rs985066761 2134 dbSNP
rs910867633 2135 dbSNP
rs943826071 2138 dbSNP
rs976906835 2151 dbSNP
rs918767921 2161 dbSNP
rs1038450783 2162 dbSNP
rs898381364 2163 dbSNP
rs1437738296 2164 dbSNP
rs1251745295 2169 dbSNP
rs1157196893 2170 dbSNP
rs758874105 2174 dbSNP
rs1484868765 2175 dbSNP
rs930103630 2196 dbSNP
rs1025538241 2200 dbSNP
rs747164081 2203 dbSNP
rs768893696 2204 dbSNP
rs1349504127 2210 dbSNP
rs888677692 2227 dbSNP
rs955195356 2234 dbSNP
rs543847235 2239 dbSNP
rs1019026844 2256 dbSNP
rs1323595057 2261 dbSNP
rs761776788 2261 dbSNP
rs375486656 2266 dbSNP
rs895811761 2268 dbSNP
rs1014379566 2270 dbSNP
rs1374558387 2276 dbSNP
rs1312500346 2280 dbSNP
rs1020748625 2285 dbSNP
rs1236343158 2286 dbSNP
rs1156864386 2295 dbSNP
rs1278750699 2301 dbSNP
rs1351201759 2308 dbSNP
rs974738322 2313 dbSNP
rs1184530474 2315 dbSNP
rs1474433824 2321 dbSNP
rs1242043772 2322 dbSNP
rs902352858 2325 dbSNP
rs1289553078 2327 dbSNP
rs999736264 2330 dbSNP
rs552221060 2331 dbSNP
rs1204068972 2332 dbSNP
rs773586622 2337 dbSNP
rs72633915 2339 dbSNP
rs1231303977 2344 dbSNP
rs1453554878 2349 dbSNP
rs985329270 2362 dbSNP
rs1415670693 2368 dbSNP
rs1361151183 2372 dbSNP
rs1017937121 2373 dbSNP
rs964977394 2376 dbSNP
rs1385676221 2382 dbSNP
rs369520441 2385 dbSNP
rs1232516125 2387 dbSNP
rs1160872999 2388 dbSNP
rs913518188 2398 dbSNP
rs976539784 2400 dbSNP
rs1189053478 2418 dbSNP
rs531316859 2425 dbSNP
rs1383951912 2428 dbSNP
rs1240022336 2430 dbSNP
rs982018271 2431 dbSNP
rs927025625 2442 dbSNP
rs560051274 2458 dbSNP
rs1285737859 2461 dbSNP
rs1211798062 2466 dbSNP
rs930179250 2469 dbSNP
rs984719461 2475 dbSNP
rs937098748 2476 dbSNP
rs1163333129 2479 dbSNP
rs1392181999 2483 dbSNP
rs1389159384 2486 dbSNP
rs1038015042 2502 dbSNP
rs1268645163 2510 dbSNP
rs1327846406 2512 dbSNP
rs910039723 2513 dbSNP
rs1377140556 2522 dbSNP
rs1448778596 2530 dbSNP
rs750131322 2532 dbSNP
rs752004324 2533 dbSNP
rs937612084 2534 dbSNP
rs1056054845 2535 dbSNP
rs1358680607 2535 dbSNP
rs1046957807 2555 dbSNP
rs891082044 2559 dbSNP
rs917256411 2567 dbSNP
rs1267131834 2575 dbSNP
rs1475526797 2580 dbSNP
rs36067317 2584 dbSNP
rs950059039 2584 dbSNP
rs1191242330 2585 dbSNP
rs1007977283 2586 dbSNP
rs1018533359 2588 dbSNP
rs1041816620 2601 dbSNP
rs900557054 2602 dbSNP
rs145428132 2606 dbSNP
rs1272011000 2610 dbSNP
rs1033123683 2642 dbSNP
rs1000265918 2646 dbSNP
rs1458349098 2648 dbSNP
rs1340278834 2655 dbSNP
rs1300047489 2659 dbSNP
rs1053576861 2664 dbSNP
rs893639053 2684 dbSNP
rs1006766485 2690 dbSNP
rs185323501 2691 dbSNP
rs1439213352 2696 dbSNP
rs1353177968 2704 dbSNP
rs1188917644 2722 dbSNP
rs1370696160 2725 dbSNP
rs1018115651 2727 dbSNP
rs1391659696 2735 dbSNP
rs1171302020 2740 dbSNP
rs1453273679 2741 dbSNP
rs1395156914 2752 dbSNP
rs971645122 2762 dbSNP
rs965029614 2767 dbSNP
rs189689469 2768 dbSNP
rs1232128268 2770 dbSNP
rs998236313 2788 dbSNP
rs1204994553 2791 dbSNP
rs1439287515 2795 dbSNP
rs1166783381 2797 dbSNP
rs1277050612 2797 dbSNP
rs927470204 2808 dbSNP
rs1304233383 2814 dbSNP
rs937547118 2817 dbSNP
rs1466826623 2826 dbSNP
rs1334462015 2831 dbSNP
rs1371852608 2833 dbSNP
rs1279442916 2838 dbSNP
rs1025291683 2852 dbSNP
rs1381842817 2857 dbSNP
rs531764019 2861 dbSNP
rs1314821238 2873 dbSNP
rs1375576466 2891 dbSNP
rs1177565174 2893 dbSNP
rs549903549 2906 dbSNP
rs1407194088 2909 dbSNP
rs974215883 2916 dbSNP
rs951235477 2931 dbSNP
rs7828134 2946 dbSNP
rs929641832 2947 dbSNP
rs1209066782 2948 dbSNP
rs1485453261 2955 dbSNP
rs767058511 2955 dbSNP
rs571973521 2960 dbSNP
rs1318886719 2961 dbSNP
rs1306925892 2964 dbSNP
rs891009649 2964 dbSNP
rs910089047 2970 dbSNP
rs774428235 2974 dbSNP
rs943971691 2979 dbSNP
rs958821520 2980 dbSNP
rs1291797668 2981 dbSNP
rs1413833532 2985 dbSNP
rs1261479299 2990 dbSNP
rs1355731247 2997 dbSNP
rs1483164575 3001 dbSNP
rs548550748 3009 dbSNP
rs1344024787 3031 dbSNP
rs752438782 3032 dbSNP
rs1258933974 3046 dbSNP
rs1159823301 3054 dbSNP
rs950096242 3055 dbSNP
rs1427206580 3056 dbSNP
rs1042132794 3061 dbSNP
rs1191884725 3062 dbSNP
rs1000736015 3063 dbSNP
rs1423639513 3064 dbSNP
rs1183752676 3074 dbSNP
rs748341671 3077 dbSNP
rs1260207693 3080 dbSNP
rs936116159 3089 dbSNP
rs1217196399 3092 dbSNP
rs1173895991 3103 dbSNP
rs181970844 3105 dbSNP
rs1466404208 3110 dbSNP
rs893266765 3128 dbSNP
rs1010205329 3139 dbSNP
rs1020308182 3141 dbSNP
rs893650283 3142 dbSNP
rs1382742664 3149 dbSNP
rs1381516415 3152 dbSNP
rs1277666532 3155 dbSNP
rs777403092 3158 dbSNP
rs1164063247 3163 dbSNP
rs1461777044 3166 dbSNP
rs867297371 3169 dbSNP
rs565909221 3175 dbSNP
rs1390850737 3197 dbSNP
rs901109967 3207 dbSNP
rs1167245974 3214 dbSNP
rs1034635061 3217 dbSNP
rs959118465 3222 dbSNP
rs1189333604 3225 dbSNP
rs974307124 3234 dbSNP
rs1251695620 3238 dbSNP
rs1213541101 3242 dbSNP
rs758044151 3245 dbSNP
rs1258092825 3246 dbSNP
rs1267588555 3256 dbSNP
rs951142296 3257 dbSNP
rs533658466 3264 dbSNP
rs1485181000 3279 dbSNP
rs998100955 3286 dbSNP
rs1229997278 3287 dbSNP
rs534053766 3288 dbSNP
rs943742701 3291 dbSNP
rs558265040 3296 dbSNP
rs1392681172 3306 dbSNP
rs1296209963 3310 dbSNP
rs1461262472 3316 dbSNP
rs576510901 3317 dbSNP
rs1372741544 3323 dbSNP
rs374981156 3334 dbSNP
rs936501622 3350 dbSNP
rs1393341456 3355 dbSNP
rs1193617885 3361 dbSNP
rs1452668036 3366 dbSNP
rs1428195954 3374 dbSNP
rs1194468815 3377 dbSNP
rs1480479404 3378 dbSNP
rs1433372272 3384 dbSNP
rs1206853055 3386 dbSNP
rs1016658722 3387 dbSNP
rs1345196394 3388 dbSNP
rs958873526 3392 dbSNP
rs1177977384 3395 dbSNP
rs1053624814 3396 dbSNP
rs1233932532 3397 dbSNP
rs991629722 3403 dbSNP
rs1332793398 3405 dbSNP
rs1024459362 3407 dbSNP
rs893194729 3413 dbSNP
rs555522319 3418 dbSNP
rs1298801528 3419 dbSNP
rs1173047928 3420 dbSNP
rs553689322 3420 dbSNP
rs1041846872 3423 dbSNP
rs751897744 3434 dbSNP
rs977692480 3443 dbSNP
rs924610458 3466 dbSNP
rs757187781 3471 dbSNP
rs1180204789 3475 dbSNP
rs1418932345 3478 dbSNP
rs1252979028 3479 dbSNP
rs749047398 3484 dbSNP
rs376466547 3488 dbSNP
rs548093144 3488 dbSNP
rs1279116934 3489 dbSNP
rs958989348 3497 dbSNP
rs996045187 3500 dbSNP
rs1346431993 3505 dbSNP
rs1258895480 3506 dbSNP
rs555878267 3508 dbSNP
rs1387498533 3511 dbSNP
rs1238235601 3517 dbSNP
rs990209442 3524 dbSNP
rs570599985 3539 dbSNP
rs1411940283 3542 dbSNP
rs1239839597 3543 dbSNP
rs1287426523 3544 dbSNP
rs943439400 3554 dbSNP
rs1039541192 3562 dbSNP
rs982479371 3570 dbSNP
rs900998548 3583 dbSNP
rs778634495 3584 dbSNP
rs1157400861 3585 dbSNP
rs148818807 3586 dbSNP
rs1184828285 3587 dbSNP
rs1474403553 3606 dbSNP
rs1256388071 3607 dbSNP
rs1488613057 3613 dbSNP
rs541728113 3624 dbSNP
rs886782009 3634 dbSNP
rs921143451 3642 dbSNP
rs560402815 3651 dbSNP
rs1005193833 3654 dbSNP
rs1329736552 3655 dbSNP
rs1053592931 3657 dbSNP
rs1016711168 3667 dbSNP
rs1231249204 3670 dbSNP
rs781695294 3689 dbSNP
rs894251019 3691 dbSNP
rs572301289 3711 dbSNP
rs556226181 3720 dbSNP
rs971585270 3722 dbSNP
rs1382118754 3729 dbSNP
rs978086942 3734 dbSNP
rs1422621780 3742 dbSNP
rs1031895709 3743 dbSNP
rs1161933536 3748 dbSNP
rs564616336 3754 dbSNP
rs1417585906 3759 dbSNP
rs990135505 3764 dbSNP
rs1473562117 3772 dbSNP
rs1239896923 3774 dbSNP
rs531702119 3776 dbSNP
rs1464915284 3794 dbSNP
rs995791618 3796 dbSNP
rs1027218657 3797 dbSNP
rs1467915685 3798 dbSNP
rs187085224 3799 dbSNP
rs1229147413 3807 dbSNP
rs1358779133 3808 dbSNP
rs910540395 3810 dbSNP
rs1371429031 3814 dbSNP
rs866567663 3821 dbSNP
rs1227783244 3822 dbSNP
rs1365938757 3824 dbSNP
rs1446540322 3830 dbSNP
rs887264761 3854 dbSNP
rs1310404604 3877 dbSNP
rs1349712654 3879 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 HITS-CLIP data was present in GSM1084045. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' cgaaagagccucgaGUCUCGUu 5'
                        ||||||| 
Target 5' ------------aaCAGAGCAa 3'
1 - 10
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000523111.2 | 3UTR | AGACUCCAUCUCAAAAAAAAAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084045
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep3
Location of target site ENST00000523111.2 | 3UTR | AACAGAGCAAGACUCCAUCUCAAAAAAAAAAAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
91 hsa-miR-5691 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT091162 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT242227 TTC9 tetratricopeptide repeat domain 9 2 4
MIRT246192 TXNIP thioredoxin interacting protein 2 2
MIRT251553 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT387267 SOX9 SRY-box 9 2 2
MIRT463486 ZC3H11A zinc finger CCCH-type containing 11A 2 12
MIRT494446 BTG2 BTG anti-proliferation factor 2 2 2
MIRT496478 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT501825 NCOA3 nuclear receptor coactivator 3 2 2
MIRT503072 C6orf120 chromosome 6 open reading frame 120 2 2
MIRT504755 TEP1 telomerase associated protein 1 2 4
MIRT505971 RAB11FIP1 RAB11 family interacting protein 1 2 4
MIRT511868 GOLGA7 golgin A7 2 6
MIRT512900 UBL4A ubiquitin like 4A 2 2
MIRT513048 LYPD6 LY6/PLAUR domain containing 6 2 6
MIRT523772 FAM83D family with sequence similarity 83 member D 2 2
MIRT525126 RPS11 ribosomal protein S11 2 2
MIRT525816 VIMP selenoprotein S 2 10
MIRT531222 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT531729 SLC2A9 solute carrier family 2 member 9 2 2
MIRT536282 LIMA1 LIM domain and actin binding 1 2 2
MIRT537291 G3BP1 G3BP stress granule assembly factor 1 2 2
MIRT537724 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT547940 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 2
MIRT554177 SLC35E2B solute carrier family 35 member E2B 2 2
MIRT555015 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT576717 Wars tryptophanyl-tRNA synthetase 2 2
MIRT607484 HEBP2 heme binding protein 2 2 2
MIRT610786 KLK2 kallikrein related peptidase 2 2 2
MIRT611491 ZNF440 zinc finger protein 440 2 2
MIRT613986 DBT dihydrolipoamide branched chain transacylase E2 2 2
MIRT615782 KIAA0319L KIAA0319 like 2 2
MIRT620563 WBSCR27 methyltransferase like 27 2 4
MIRT624157 DGKE diacylglycerol kinase epsilon 2 2
MIRT626088 MKLN1 muskelin 1 2 2
MIRT629481 GSN gelsolin 2 2
MIRT636645 CDK4 cyclin dependent kinase 4 2 2
MIRT638074 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT638442 PLXDC2 plexin domain containing 2 2 2
MIRT641025 KLHL7 kelch like family member 7 2 2
MIRT641539 MOCOS molybdenum cofactor sulfurase 2 2
MIRT643004 ZNF829 zinc finger protein 829 2 2
MIRT643092 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT644979 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT645912 PLXNA3 plexin A3 2 2
MIRT646605 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT648033 FADS6 fatty acid desaturase 6 2 2
MIRT657491 HBEGF heparin binding EGF like growth factor 2 2
MIRT658381 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT659695 CD200 CD200 molecule 2 2
MIRT661276 TEX9 testis expressed 9 2 2
MIRT661348 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT662948 JPH2 junctophilin 2 2 2
MIRT663225 PPY pancreatic polypeptide 2 2
MIRT663280 SPN sialophorin 2 2
MIRT663335 ZNF74 zinc finger protein 74 2 2
MIRT664344 C16orf45 chromosome 16 open reading frame 45 2 2
MIRT664855 TBRG4 transforming growth factor beta regulator 4 2 2
MIRT665484 VPS53 VPS53, GARP complex subunit 2 2
MIRT666428 SH2B3 SH2B adaptor protein 3 2 2
MIRT668162 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT670170 CCDC142 coiled-coil domain containing 142 2 2
MIRT671277 MTO1 mitochondrial tRNA translation optimization 1 2 2
MIRT672284 GP2 glycoprotein 2 2 2
MIRT672435 RAB10 RAB10, member RAS oncogene family 2 2
MIRT672646 SLC25A16 solute carrier family 25 member 16 2 4
MIRT672760 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672834 AKR7L aldo-keto reductase family 7 like (gene/pseudogene) 2 2
MIRT672841 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT673080 AK1 adenylate kinase 1 2 2
MIRT673148 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673323 THAP1 THAP domain containing 1 2 2
MIRT673893 DCTN6 dynactin subunit 6 2 2
MIRT674182 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT674607 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT674740 SLC16A1 solute carrier family 16 member 1 2 2
MIRT675140 MOGAT1 monoacylglycerol O-acyltransferase 1 2 4
MIRT675194 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT675886 SNAP29 synaptosome associated protein 29 2 2
MIRT679163 PSMB2 proteasome subunit beta 2 2 2
MIRT680337 ZNF281 zinc finger protein 281 2 2
MIRT706699 GPR155 G protein-coupled receptor 155 2 2
MIRT706911 THAP6 THAP domain containing 6 2 2
MIRT707880 SLC45A4 solute carrier family 45 member 4 2 2
MIRT709097 SEPT4 septin 4 2 2
MIRT709408 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT710845 FAM210A family with sequence similarity 210 member A 2 2
MIRT711358 VPS8 VPS8, CORVET complex subunit 2 2
MIRT718590 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT723649 RPTN repetin 2 2
MIRT724208 NUP205 nucleoporin 205 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-5691 Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)

Error report submission