pre-miRNA Information
pre-miRNA hsa-mir-4708   
Genomic Coordinates chr14: 65335117 - 65335183
Description Homo sapiens miR-4708 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4708-5p
Sequence 9| AGAGAUGCCGCCUUGCUCCUU |29
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1017378847 9 dbSNP
rs750825813 10 dbSNP
rs1297395738 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LRRC2   
Synonyms -
Description leucine rich repeat containing 2
Transcript NM_024512   
Expression
Putative miRNA Targets on LRRC2
3'UTR of LRRC2
(miRNA target sites are highlighted)
>LRRC2|NM_024512|3'UTR
   1 TATCCATCAGAAGACTGCAAATCTCACTATTCTCTGGAGCTATATATAAATCTTTGTTATGATCATGTCATATAGGAAGA
  81 ATGGCTTGTGCTTAAGGACAAAGTCTAGAAACCACTATCATAGTTGCTAAAAAAAATGGTTTTCAAATGTCAAATACATG
 161 AGTATCTCCCTCCATGGACTGGAGAATTGAAAAATTGGTTTGTATATTGATATTTCCAGGTTCATTTGCATATACTTTTT
 241 TCCAAATAATGCACATTTAATATGTTTTAAAATGTCTTATTTTTAAGAATTATAACTAAAAGACCAAATACTGAAGTTAA
 321 GTGCATTGTTTTCAGGAATCAAAAGATAAAGGGGCCGGGTGTGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCC
 401 GAAGTGGGTGGATCACCTGAGGTCCGGAGTTCGAGGCTGGTTTGGCCAGCATGGCGAAACCCCATCTCTACTAAAAATAC
 481 AAAAAATTAGCTGGGCATGGTGGCAGTTGCCTGTAATCCTAGCTACTCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCT
 561 GGGAGGTGGAGTTGCAGTGAGCCGAGATCATGCGACTGCACTCCAGCCTGGGTGACAGAGCCAGACTCTGTCTCAAAAAA
 641 AAAAAAAAAGAAAAGAAAAAGATAAAGGGATTGTGAAAAGAGCATTTATATTGGACTAATCAGATGAGAGTGTTTTGTTA
 721 TTTTGAAAGAGTTTCTTTTACTGAGAATAATCTTCCTTGAGTTTATATAAACTGCTATTTCCATATGTTTTAAGTTATAT
 801 TTTGGCAAGTGTAGACTCCCAGGAGAGACTTGTAGGTACAATCTAGGCCTTGAAGAAACAAAGGCTGGAATATCTGCCCA
 881 TGCTTTGGGCATGAGATGCTCAGATGGTGCGTGGGTAGATCTAGTTGAGGAAGTGTGGGCCTGGCTGTTCATGGGAAGTC
 961 TTCAGTGGCCTTCATGGATGGCCATCCAGTCCTGAGTGGTCACCCTGGGGGTCCTGGGACACACCTCAGTAAAGAGCAAA
1041 GGCAACGCCCTCAGGGTCCCTTCCTCCAAGATGGCCATGTAGGGTAATGGAGATGACCAGTCCACACTGATAAGGAGTTC
1121 CTAGCAAGGCTTCCTTGTGGGTACCACAGGACAACTCTGCCCATAGCAAAGATGCTTCAGTCCAGAGGGAGCCCATGGGC
1201 TGTTTGAATTTGGGAGAGGTGGGATTCATTACAAGACTTTGGGCTCTTATGTCACATCACATGATTTGGAGAAATTAGAC
1281 ACAATCTCTTATTTTTATACCACTGTCTTGGGCTAAAATAAACAGGTTGTGGCTGATGGTGTTGAAGATAAATAAGCTTA
1361 AACAAATAACTTTGGCCGGGCACGGTGGCTCACACCTATAATCCCAGCACTATGGGAGGCTGAGGCAAGCAGGTTGTTTG
1441 AGCCCAGGAATTTGAGAACAGGATTTTGAGAACAGCTTGGACATCATGACGAAACCCCATCTCCACAAAAAAATTCAAAA
1521 AATTAGCCAGGTGTGGTGGCATGTGCCTGTGGTCCCAGCTACTCAGGAGGCTGAGGTGGGAAAATCACTTGAGCCCAGGA
1601 GGTCGAGGCTGCAGTGTGCTGTGATTGTGACACTGCCCTCCAGCCTGGGTGACAGAGTGAGACCCTGTCTCAAAAGCAAA
1681 ACAAACAGCAATAACAATATTATTATTGTTATAACTAAAAAAAAAAAAACAAAAACAAGCAGCTTTTGTGACTAAGAAGG
1761 AAAATATGCATATAGTGGCATATTTTTATATGAATCATCTCCTCTGTGGTCTTGCCCAGTACCATCCAGTGGAGCTTTCT
1841 GCAGTGACGGAAATGTTCTGTATTTGCGTTGTCCAACGTGGTAAACCAGACACATGTGATTCTTGAGCACTTGAACAATG
1921 ACTGATGTGATTGAAGAACCCATCTTTCAATTCAATTAAATTTAAATAGCCACATTTAACTCCAGCCTTGGGTTTGACCT
2001 GATGGAAAATTCCCATGAGAGAGTGCTCCAAACCGTTCCAAGGTGGGGCCAGTTGCGATTCTAAAGGAAGAAGCACTAAA
2081 TGGCAGGGTGATCAGTCCAAAGCATTTATGAGGGGAGCTTACATACAGCATGGGCTGCAGCGTCCTTGTGATGGGCAGTG
2161 AGACAAGGGATGTTCTACCTGGGCATGTCCCCAGCGAGGGGGTTGGGGGATGGAGTTCACATGAAGATGTAAGGAATTTG
2241 GGTGGGGGCTGGGCTGGCTTCTACATGTTTAGCAACACGGCTGATCTTTCAGTGTTTCCAGCAACAACCTAAGCACCGTT
2321 ATCAGTGCCTAGGAATGTTCAAGGCCCAGGCTGGGGTTCAGACCTGCAGAGGAAAACATCAGCTGGCTGGGTCAAGGCAC
2401 CATGTGTTACTTGGTCAGGACAGAGACAAAAATGAGGAAAACTAGGGGACCCCACACACATGTGGCTACCATACTCCTGA
2481 ACAGGTCTAGCTAGTTATTTGTTTTTTTGGAAGTTAATCTGGGGTAGAAATGTATGGTGATTTTTATTTTCTCTGTCTGA
2561 AGAACCAGCCATTTTTAAAAAGGTTATTATTGACATCCCAATATTTTGTCTTGGTGGGCTTACTCATAAGTCCAAACATT
2641 TTATTCTCAACAGGTGTAAAACAGGCAGAGCATTCTAAAACCACATGGTAGTGCTTTGGTGGAGGACTGCTTCCACTTAG
2721 AAACAAACTCTGAGAAGTAGGCTAAGAGAAGACAAGAGGGCCGGGCGCGGTGACTCACGCCTATAATCCCAGCACTTTGG
2801 GAGGCCGAGATGGGTGAATCATGAGGTCAGGAGTTCGAGACCAGCCTAAACAACATAGTGAAACCCTGTCTCTATTAAAA
2881 ATGCAAAAAATTAGCCGGGCGTGGTGGGCACCCGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACC
2961 CAGGAAGCAGAGGTTGCAGTAAGCTGAGATCCCACCATTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCATCTCAAAA
3041 AAAAAAAAAAAAAAAAAAAAAGAGAGAGAGATGAAAAGAGTAGGAAAATGAGAAATCACCTTCGTTGAATCTTAAATAGT
3121 TACATTTTTTTCTTTTTAACACTAAAAATACAATTCAAATTTATTAGCTCTACTACTTGAATGATTTTGGAATTTTATGT
3201 CATGCTAAGGTATGTGTTACATATGGCCAAGTGGAAAATATATCTGAAGAGGGGCTTTCATACAAATAGACTGTTCATAA
3281 TTTATGTAAATTTTATTTTAATAAAATCAGTTTTTTGTTTAAAAACCTTGTTTCACTGTCACATATGAAAAAAATACTGC
3361 ATTGATATATAATTATTTCATGTTACATAATAACCCAAAACAAATAATTACTTGAATATGTTTGTAGAGATACTATTTAA
3441 TTTATTCATATAAATGTGCAGAAAGATTCCAAAGGAGAATATATATCTTGTGAAAATATGGAGATTTGAAAATTTGACAT
3521 GATGCAAATAGACTGATACATAATTTGGAAAGGTTATTTACATGGCAGAATACATGTATGAATATTAAAGTAATATGAAT
3601 GAAAGAATAAAATATTCTTAGAAGAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uucCUCGUUCCGCCGUAGAGa 5'
             |||::|| |  |||||| 
Target 5' acaGAGTGAGACTCCATCTCa 3'
3017 - 3037 134.00 -12.00
2
miRNA  3' uuccUCGUUCCGC-----CGUAGAGa 5'
              |||| ||||      |||||| 
Target 5' ggccAGCATGGCGAAACCCCATCTCt 3'
444 - 469 129.00 -17.20
3
miRNA  3' uuccucguuccgcCGUAGAGa 5'
                       |:||||| 
Target 5' gtcaaatacatgaGTATCTCc 3'
149 - 169 124.00 -8.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30452785 36 COSMIC
COSN31574561 46 COSMIC
COSN30168016 52 COSMIC
COSN31527384 71 COSMIC
COSN31587076 79 COSMIC
COSN30474466 108 COSMIC
COSN32102347 121 COSMIC
COSN30500394 128 COSMIC
COSN28864766 129 COSMIC
COSN30169133 166 COSMIC
COSN28486815 401 COSMIC
COSN32173545 531 COSMIC
COSN18764981 650 COSMIC
COSN20090814 650 COSMIC
COSN17038175 1050 COSMIC
COSN15227546 1180 COSMIC
COSN26109782 1192 COSMIC
COSN17038230 1246 COSMIC
COSN17078577 1619 COSMIC
COSN27432029 1717 COSMIC
COSN20098422 1729 COSMIC
COSN20098423 1730 COSMIC
COSN32064413 1730 COSMIC
COSN9552354 1944 COSMIC
COSN22889419 2055 COSMIC
COSN26890767 2057 COSMIC
COSN24841313 2541 COSMIC
COSN20098421 3037 COSMIC
COSN17792479 3427 COSMIC
COSN29419860 3460 COSMIC
rs11720094 593 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs756136717 4 dbSNP
rs752978466 5 dbSNP
rs779546755 7 dbSNP
rs1218702550 8 dbSNP
rs544193168 18 dbSNP
rs1163380400 19 dbSNP
rs758224111 26 dbSNP
rs750173977 27 dbSNP
rs1413960694 28 dbSNP
rs1402589798 29 dbSNP
rs930801818 38 dbSNP
rs1172181069 39 dbSNP
rs1400777870 40 dbSNP
rs1466294758 41 dbSNP
rs764996936 45 dbSNP
rs761781879 46 dbSNP
rs371787059 49 dbSNP
rs944750189 52 dbSNP
rs1284926394 55 dbSNP
rs1244016678 56 dbSNP
rs908168413 60 dbSNP
rs1379001487 65 dbSNP
rs911905343 66 dbSNP
rs1389357219 75 dbSNP
rs1260347238 87 dbSNP
rs1319078678 88 dbSNP
rs1160901174 95 dbSNP
rs1476492899 99 dbSNP
rs1198453546 113 dbSNP
rs1419133183 118 dbSNP
rs78052696 127 dbSNP
rs74669680 128 dbSNP
rs77417748 129 dbSNP
rs1181929088 136 dbSNP
rs549962274 137 dbSNP
rs1234882118 148 dbSNP
rs1471735750 151 dbSNP
rs1195784896 153 dbSNP
rs1424021244 158 dbSNP
rs531263488 159 dbSNP
rs1168346263 160 dbSNP
rs1398374929 161 dbSNP
rs931187435 166 dbSNP
rs1334854087 169 dbSNP
rs555763866 171 dbSNP
rs1358680024 174 dbSNP
rs1446415749 180 dbSNP
rs1280618831 184 dbSNP
rs376658198 187 dbSNP
rs375538373 202 dbSNP
rs573373699 203 dbSNP
rs989341135 203 dbSNP
rs956578893 206 dbSNP
rs1277232014 207 dbSNP
rs1336875970 218 dbSNP
rs1218226693 223 dbSNP
rs965240559 227 dbSNP
rs1263798727 228 dbSNP
rs912419907 243 dbSNP
rs981885382 251 dbSNP
rs760790813 255 dbSNP
rs1479102588 256 dbSNP
rs558343734 260 dbSNP
rs1173412135 273 dbSNP
rs1370865597 275 dbSNP
rs1280976341 276 dbSNP
rs970848463 280 dbSNP
rs987539697 287 dbSNP
rs1432915510 290 dbSNP
rs1023299018 298 dbSNP
rs539587776 304 dbSNP
rs956127609 306 dbSNP
rs374335214 318 dbSNP
rs1395928271 321 dbSNP
rs1333212403 322 dbSNP
rs752741771 335 dbSNP
rs1159070169 346 dbSNP
rs1273847053 347 dbSNP
rs1000165512 351 dbSNP
rs995475118 351 dbSNP
rs1399362776 353 dbSNP
rs897996903 356 dbSNP
rs182494106 357 dbSNP
rs557030208 359 dbSNP
rs1159467393 361 dbSNP
rs1477824602 364 dbSNP
rs1197970349 365 dbSNP
rs1245141155 370 dbSNP
rs1452875175 379 dbSNP
rs1023214419 380 dbSNP
rs1013619026 391 dbSNP
rs760104337 394 dbSNP
rs1050440411 395 dbSNP
rs1057483932 399 dbSNP
rs1393566548 400 dbSNP
rs551868753 401 dbSNP
rs1323390960 402 dbSNP
rs1328932027 411 dbSNP
rs1468959522 413 dbSNP
rs1448551807 423 dbSNP
rs151128208 425 dbSNP
rs1048198506 426 dbSNP
rs1237380276 429 dbSNP
rs145660962 432 dbSNP
rs1209012621 433 dbSNP
rs989414647 434 dbSNP
rs920970089 455 dbSNP
rs1180768883 456 dbSNP
rs1039618419 460 dbSNP
rs1439130263 480 dbSNP
rs1224069105 488 dbSNP
rs1343875888 490 dbSNP
rs1300794571 496 dbSNP
rs1442558225 509 dbSNP
rs1162979040 529 dbSNP
rs771359955 530 dbSNP
rs935204240 530 dbSNP
rs1320532495 531 dbSNP
rs1375760068 533 dbSNP
rs754303693 536 dbSNP
rs1389166962 540 dbSNP
rs1314330295 541 dbSNP
rs943961518 550 dbSNP
rs912359951 551 dbSNP
rs1023330034 559 dbSNP
rs1280823662 562 dbSNP
rs546591544 563 dbSNP
rs1393570001 569 dbSNP
rs1457529445 570 dbSNP
rs1194082367 574 dbSNP
rs1258370224 583 dbSNP
rs1175723507 584 dbSNP
rs11720094 593 dbSNP
rs756284956 594 dbSNP
rs750642705 602 dbSNP
rs1399085344 609 dbSNP
rs952401571 611 dbSNP
rs1484857114 612 dbSNP
rs1402321843 622 dbSNP
rs1243722243 632 dbSNP
rs1216312600 633 dbSNP
rs980441401 634 dbSNP
rs1342344059 635 dbSNP
rs77526522 636 dbSNP
rs1428192566 640 dbSNP
rs1277335505 643 dbSNP
rs1317462535 643 dbSNP
rs1225551509 644 dbSNP
rs1257795666 645 dbSNP
rs1483603104 648 dbSNP
rs995107879 649 dbSNP
rs1194748543 650 dbSNP
rs1256014285 650 dbSNP
rs1345032894 650 dbSNP
rs1489597513 650 dbSNP
rs1177828589 655 dbSNP
rs746250613 655 dbSNP
rs1236014292 659 dbSNP
rs962601439 660 dbSNP
rs117567204 667 dbSNP
rs1362373135 668 dbSNP
rs924686363 670 dbSNP
rs1015132390 681 dbSNP
rs978855137 682 dbSNP
rs551951604 691 dbSNP
rs1220781359 694 dbSNP
rs769542961 705 dbSNP
rs1313061661 708 dbSNP
rs1233658401 717 dbSNP
rs890572752 720 dbSNP
rs1364770800 731 dbSNP
rs757887077 732 dbSNP
rs1289961831 743 dbSNP
rs1262866470 757 dbSNP
rs1485078563 761 dbSNP
rs1193333250 765 dbSNP
rs533292966 787 dbSNP
rs1013128500 797 dbSNP
rs747729681 798 dbSNP
rs996239179 805 dbSNP
rs1381649182 814 dbSNP
rs562629313 818 dbSNP
rs1435604092 825 dbSNP
rs113949979 832 dbSNP
rs1343415993 834 dbSNP
rs1438333989 834 dbSNP
rs139903458 836 dbSNP
rs1430370342 842 dbSNP
rs190438251 843 dbSNP
rs1440457124 850 dbSNP
rs887300102 870 dbSNP
rs1048172230 874 dbSNP
rs1241012300 878 dbSNP
rs949236070 879 dbSNP
rs1187009335 881 dbSNP
rs916393449 889 dbSNP
rs1266409151 894 dbSNP
rs1255168309 903 dbSNP
rs1212706767 905 dbSNP
rs1467713332 906 dbSNP
rs562080446 911 dbSNP
rs990534059 913 dbSNP
rs185676970 917 dbSNP
rs1405694096 923 dbSNP
rs1273444795 939 dbSNP
rs952432128 940 dbSNP
rs899465831 941 dbSNP
rs1201906428 945 dbSNP
rs147872844 952 dbSNP
rs144738023 954 dbSNP
rs546403031 961 dbSNP
rs575439400 972 dbSNP
rs1354066976 974 dbSNP
rs112269221 975 dbSNP
rs1052331903 978 dbSNP
rs1015577804 981 dbSNP
rs1379459913 983 dbSNP
rs542193323 984 dbSNP
rs1279108452 985 dbSNP
rs925151182 991 dbSNP
rs978780151 1001 dbSNP
rs746966606 1007 dbSNP
rs1313831139 1008 dbSNP
rs148736368 1010 dbSNP
rs1334579107 1015 dbSNP
rs1415721819 1025 dbSNP
rs1029124807 1034 dbSNP
rs915888564 1046 dbSNP
rs535496680 1047 dbSNP
rs960094790 1057 dbSNP
rs1296664484 1063 dbSNP
rs567969994 1074 dbSNP
rs1035922800 1081 dbSNP
rs983073683 1084 dbSNP
rs1182411267 1090 dbSNP
rs779811845 1096 dbSNP
rs999923028 1100 dbSNP
rs1474091819 1109 dbSNP
rs902485579 1111 dbSNP
rs951520471 1115 dbSNP
rs1027165257 1117 dbSNP
rs949267635 1122 dbSNP
rs1352868553 1131 dbSNP
rs1355169024 1134 dbSNP
rs1427750308 1140 dbSNP
rs995218393 1141 dbSNP
rs1054877664 1172 dbSNP
rs1231837087 1174 dbSNP
rs1280491712 1184 dbSNP
rs931105152 1187 dbSNP
rs1213655530 1191 dbSNP
rs1460887234 1195 dbSNP
rs1415502305 1196 dbSNP
rs1189869095 1198 dbSNP
rs1443614285 1200 dbSNP
rs527368384 1210 dbSNP
rs907647472 1210 dbSNP
rs1484689791 1212 dbSNP
rs1017911788 1214 dbSNP
rs1008295971 1227 dbSNP
rs1175095782 1232 dbSNP
rs1424088810 1240 dbSNP
rs1475841427 1248 dbSNP
rs961347314 1256 dbSNP
rs1417696575 1261 dbSNP
rs1416227352 1262 dbSNP
rs912206465 1283 dbSNP
rs1251414224 1288 dbSNP
rs1220099091 1291 dbSNP
rs1413484030 1302 dbSNP
rs1300380612 1304 dbSNP
rs1341560063 1312 dbSNP
rs530019073 1326 dbSNP
rs988130117 1331 dbSNP
rs552885460 1339 dbSNP
rs1219302628 1342 dbSNP
rs1279000146 1347 dbSNP
rs1234356213 1370 dbSNP
rs1345574302 1372 dbSNP
rs1052296537 1375 dbSNP
rs1263864872 1377 dbSNP
rs935257293 1378 dbSNP
rs903655457 1383 dbSNP
rs368223778 1384 dbSNP
rs1374281736 1389 dbSNP
rs1293024169 1396 dbSNP
rs1032855972 1398 dbSNP
rs958139590 1398 dbSNP
rs1429235358 1399 dbSNP
rs750196630 1403 dbSNP
rs947463407 1404 dbSNP
rs1386377733 1412 dbSNP
rs1392278897 1416 dbSNP
rs1316767020 1417 dbSNP
rs999594450 1419 dbSNP
rs1436768200 1431 dbSNP
rs915965841 1432 dbSNP
rs991609485 1433 dbSNP
rs778009618 1438 dbSNP
rs1241746682 1439 dbSNP
rs1286631618 1451 dbSNP
rs1349950133 1467 dbSNP
rs928656190 1472 dbSNP
rs1203085936 1477 dbSNP
rs1291775671 1478 dbSNP
rs756323463 1482 dbSNP
rs1194533255 1483 dbSNP
rs983000014 1490 dbSNP
rs951613428 1495 dbSNP
rs1027133494 1497 dbSNP
rs1453683445 1499 dbSNP
rs1156617734 1502 dbSNP
rs1157135480 1505 dbSNP
rs1393357471 1513 dbSNP
rs1461602248 1521 dbSNP
rs974660617 1527 dbSNP
rs1391905429 1531 dbSNP
rs1448345237 1533 dbSNP
rs1250723377 1534 dbSNP
rs1236814373 1535 dbSNP
rs752860415 1539 dbSNP
rs895064564 1557 dbSNP
rs183077452 1564 dbSNP
rs1272771562 1565 dbSNP
rs1467364314 1579 dbSNP
rs1255488019 1580 dbSNP
rs1214844368 1592 dbSNP
rs1008011217 1594 dbSNP
rs1350532296 1596 dbSNP
rs761689241 1604 dbSNP
rs898299522 1607 dbSNP
rs144549897 1608 dbSNP
rs1370750483 1611 dbSNP
rs190456889 1615 dbSNP
rs999374273 1625 dbSNP
rs903791268 1634 dbSNP
rs1043651835 1655 dbSNP
rs1164738900 1656 dbSNP
rs1415122390 1659 dbSNP
rs1466871676 1667 dbSNP
rs1298200251 1677 dbSNP
rs530600803 1683 dbSNP
rs149729708 1688 dbSNP
rs867814817 1691 dbSNP
rs1300837673 1695 dbSNP
rs1232455817 1697 dbSNP
rs1232229667 1698 dbSNP
rs1373254474 1711 dbSNP
rs1326603485 1712 dbSNP
rs933597119 1715 dbSNP
rs1425434896 1716 dbSNP
rs922158435 1717 dbSNP
rs1384069791 1718 dbSNP
rs550812053 1724 dbSNP
rs1258867349 1727 dbSNP
rs534669979 1727 dbSNP
rs1187606401 1728 dbSNP
rs958469692 1728 dbSNP
rs1416169209 1729 dbSNP
rs11392733 1730 dbSNP
rs1478573893 1730 dbSNP
rs6790329 1730 dbSNP
rs747805496 1730 dbSNP
rs1491384018 1731 dbSNP
rs201181892 1731 dbSNP
rs1375921881 1732 dbSNP
rs764429094 1732 dbSNP
rs1310798333 1733 dbSNP
rs1414109753 1733 dbSNP
rs1452083559 1733 dbSNP
rs1396390873 1734 dbSNP
rs1342176527 1735 dbSNP
rs1203998723 1736 dbSNP
rs1382612746 1736 dbSNP
rs757964786 1736 dbSNP
rs768231234 1736 dbSNP
rs972200987 1736 dbSNP
rs1349164574 1737 dbSNP
rs1210833677 1738 dbSNP
rs1032474214 1739 dbSNP
rs1187532999 1739 dbSNP
rs1489460810 1739 dbSNP
rs978592066 1747 dbSNP
rs767642407 1761 dbSNP
rs1200305406 1766 dbSNP
rs1395184470 1775 dbSNP
rs928582965 1777 dbSNP
rs1446938502 1782 dbSNP
rs1171649098 1790 dbSNP
rs1047113812 1794 dbSNP
rs1025436240 1805 dbSNP
rs1288077747 1806 dbSNP
rs1361459568 1808 dbSNP
rs930184598 1809 dbSNP
rs1260189703 1811 dbSNP
rs1207330156 1819 dbSNP
rs1013522061 1829 dbSNP
rs895095902 1833 dbSNP
rs1278800903 1837 dbSNP
rs1319327558 1843 dbSNP
rs1486378396 1848 dbSNP
rs1033570008 1849 dbSNP
rs920163027 1850 dbSNP
rs529349761 1853 dbSNP
rs1253283064 1862 dbSNP
rs995359996 1865 dbSNP
rs1191279861 1867 dbSNP
rs1382023197 1868 dbSNP
rs898323716 1870 dbSNP
rs1158039371 1876 dbSNP
rs139567892 1877 dbSNP
rs1462615248 1878 dbSNP
rs1328139922 1881 dbSNP
rs974374358 1885 dbSNP
rs964556792 1894 dbSNP
rs1350272987 1896 dbSNP
rs939797556 1900 dbSNP
rs911401443 1913 dbSNP
rs986916455 1917 dbSNP
rs146038568 1921 dbSNP
rs1325846175 1929 dbSNP
rs1293346811 1930 dbSNP
rs142648318 1931 dbSNP
rs137890598 1933 dbSNP
rs1311998636 1936 dbSNP
rs1432515947 1939 dbSNP
rs967709405 1955 dbSNP
rs974995622 1965 dbSNP
rs546491141 1970 dbSNP
rs752130323 1979 dbSNP
rs1195922135 1986 dbSNP
rs1405757404 1991 dbSNP
rs1425319317 2000 dbSNP
rs894941452 2002 dbSNP
rs1418765996 2005 dbSNP
rs1461138500 2007 dbSNP
rs146173880 2019 dbSNP
rs1257295814 2024 dbSNP
rs1443072528 2033 dbSNP
rs557546430 2034 dbSNP
rs967219805 2035 dbSNP
rs1294303056 2042 dbSNP
rs141204167 2043 dbSNP
rs1333643017 2049 dbSNP
rs574471085 2051 dbSNP
rs1274722961 2055 dbSNP
rs1281289745 2056 dbSNP
rs1195370137 2090 dbSNP
rs907300660 2092 dbSNP
rs552735549 2096 dbSNP
rs929942713 2100 dbSNP
rs1188323879 2106 dbSNP
rs919964795 2115 dbSNP
rs1474982457 2118 dbSNP
rs534597137 2124 dbSNP
rs1341013495 2131 dbSNP
rs1163017525 2134 dbSNP
rs187306035 2142 dbSNP
rs796102961 2160 dbSNP
rs1410593639 2172 dbSNP
rs1169915121 2183 dbSNP
rs1412639033 2191 dbSNP
rs1417183626 2192 dbSNP
rs541982708 2194 dbSNP
rs942968366 2195 dbSNP
rs911355114 2196 dbSNP
rs1313075016 2197 dbSNP
rs995391019 2200 dbSNP
rs1339736378 2201 dbSNP
rs1213405139 2202 dbSNP
rs1270293470 2210 dbSNP
rs986999009 2210 dbSNP
rs962648324 2217 dbSNP
rs1169097813 2229 dbSNP
rs1015880952 2240 dbSNP
rs1279572489 2242 dbSNP
rs1484555111 2255 dbSNP
rs955565771 2257 dbSNP
rs558450322 2271 dbSNP
rs143075889 2278 dbSNP
rs1475871562 2279 dbSNP
rs149204927 2282 dbSNP
rs1186321143 2297 dbSNP
rs1388432353 2298 dbSNP
rs1436703286 2299 dbSNP
rs1174786770 2306 dbSNP
rs1050852575 2307 dbSNP
rs1258538389 2309 dbSNP
rs1433239549 2313 dbSNP
rs996561206 2317 dbSNP
rs899509954 2329 dbSNP
rs1275248762 2334 dbSNP
rs548320607 2347 dbSNP
rs773710664 2348 dbSNP
rs34924380 2350 dbSNP
rs1272461423 2354 dbSNP
rs375248674 2363 dbSNP
rs775315365 2364 dbSNP
rs1206607487 2365 dbSNP
rs568525588 2376 dbSNP
rs1284716455 2386 dbSNP
rs1447757141 2392 dbSNP
rs1215291601 2393 dbSNP
rs1336645684 2396 dbSNP
rs1284518228 2400 dbSNP
rs959338212 2409 dbSNP
rs1246473908 2412 dbSNP
rs1455630277 2416 dbSNP
rs1035239409 2419 dbSNP
rs1394933501 2428 dbSNP
rs1477332522 2436 dbSNP
rs550388339 2447 dbSNP
rs1386175320 2448 dbSNP
rs761568686 2450 dbSNP
rs528517003 2453 dbSNP
rs1047176566 2454 dbSNP
rs1042979093 2456 dbSNP
rs368147627 2481 dbSNP
rs945578682 2487 dbSNP
rs1441000601 2491 dbSNP
rs994288677 2502 dbSNP
rs1446863741 2513 dbSNP
rs898451103 2523 dbSNP
rs992205474 2526 dbSNP
rs116615467 2541 dbSNP
rs959413914 2541 dbSNP
rs1163366290 2546 dbSNP
rs1463391723 2555 dbSNP
rs1469994806 2555 dbSNP
rs372193526 2562 dbSNP
rs890029897 2577 dbSNP
rs1419059067 2585 dbSNP
rs974096319 2594 dbSNP
rs1184567420 2595 dbSNP
rs1364933716 2606 dbSNP
rs759082076 2618 dbSNP
rs1051805037 2622 dbSNP
rs1158312618 2626 dbSNP
rs962971899 2627 dbSNP
rs1157491648 2636 dbSNP
rs1468804723 2638 dbSNP
rs531180838 2651 dbSNP
rs544434164 2662 dbSNP
rs1387911000 2666 dbSNP
rs542402221 2668 dbSNP
rs1329440815 2670 dbSNP
rs946474958 2672 dbSNP
rs1468090379 2682 dbSNP
rs1439662537 2687 dbSNP
rs67305272 2692 dbSNP
rs559379493 2710 dbSNP
rs1029469679 2716 dbSNP
rs1272834677 2720 dbSNP
rs373777824 2721 dbSNP
rs1197690396 2724 dbSNP
rs1034926740 2735 dbSNP
rs1251864342 2737 dbSNP
rs996635144 2738 dbSNP
rs1290329620 2747 dbSNP
rs1222936788 2755 dbSNP
rs540743873 2761 dbSNP
rs576445467 2762 dbSNP
rs1163732384 2763 dbSNP
rs1280919686 2766 dbSNP
rs1167994082 2767 dbSNP
rs775545962 2768 dbSNP
rs1314447077 2777 dbSNP
rs950523824 2778 dbSNP
rs530194911 2780 dbSNP
rs1312268627 2784 dbSNP
rs1323251517 2785 dbSNP
rs1338995390 2795 dbSNP
rs558257865 2804 dbSNP
rs1350910295 2805 dbSNP
rs182257287 2806 dbSNP
rs554500480 2807 dbSNP
rs536423418 2810 dbSNP
rs565708659 2813 dbSNP
rs1410527424 2821 dbSNP
rs547086734 2828 dbSNP
rs1253554636 2836 dbSNP
rs889822484 2837 dbSNP
rs1051276798 2841 dbSNP
rs918091872 2846 dbSNP
rs372147955 2854 dbSNP
rs1159341637 2858 dbSNP
rs1372029012 2863 dbSNP
rs1427310778 2874 dbSNP
rs1175418103 2876 dbSNP
rs4682819 2884 dbSNP
rs1393378665 2891 dbSNP
rs938135206 2892 dbSNP
rs902652688 2896 dbSNP
rs570859151 2897 dbSNP
rs946432070 2900 dbSNP
rs1404321235 2901 dbSNP
rs926689861 2905 dbSNP
rs974507120 2907 dbSNP
rs1349233547 2912 dbSNP
rs914986219 2913 dbSNP
rs774709158 2914 dbSNP
rs1486619073 2917 dbSNP
rs908501970 2927 dbSNP
rs1260669812 2929 dbSNP
rs1447121869 2941 dbSNP
rs1008727638 2945 dbSNP
rs368645178 2949 dbSNP
rs1195033665 2958 dbSNP
rs1395540044 2960 dbSNP
rs1214889470 2962 dbSNP
rs1453739166 2964 dbSNP
rs991001304 2974 dbSNP
rs982730339 2980 dbSNP
rs1285972485 2983 dbSNP
rs201082057 2992 dbSNP
rs1289652062 2993 dbSNP
rs1346656154 2995 dbSNP
rs1388265732 3009 dbSNP
rs1300632701 3014 dbSNP
rs1432904180 3015 dbSNP
rs1328015462 3020 dbSNP
rs1235784794 3029 dbSNP
rs1368994380 3031 dbSNP
rs148668844 3034 dbSNP
rs1429116503 3035 dbSNP
rs1206992916 3036 dbSNP
rs955268905 3037 dbSNP
rs369187440 3041 dbSNP
rs1240287363 3043 dbSNP
rs1029543395 3047 dbSNP
rs1214951535 3050 dbSNP
rs1299141018 3050 dbSNP
rs1434340828 3052 dbSNP
rs1373798419 3054 dbSNP
rs1175666830 3057 dbSNP
rs975226601 3059 dbSNP
rs7372886 3060 dbSNP
rs1189373822 3061 dbSNP
rs1158108449 3062 dbSNP
rs1167140207 3062 dbSNP
rs1395266730 3062 dbSNP
rs1411431830 3062 dbSNP
rs1435914130 3062 dbSNP
rs1455860323 3062 dbSNP
rs202174793 3062 dbSNP
rs35530625 3062 dbSNP
rs752192772 3062 dbSNP
rs756109275 3062 dbSNP
rs780083169 3062 dbSNP
rs937691006 3064 dbSNP
rs1425834734 3066 dbSNP
rs927654483 3066 dbSNP
rs552599913 3068 dbSNP
rs1474358707 3070 dbSNP
rs1234784917 3072 dbSNP
rs1356418709 3072 dbSNP
rs950630801 3082 dbSNP
rs1026123328 3094 dbSNP
rs973218605 3098 dbSNP
rs1243665618 3103 dbSNP
rs531270395 3104 dbSNP
rs374691888 3105 dbSNP
rs963817669 3111 dbSNP
rs1485150314 3118 dbSNP
rs1476087232 3119 dbSNP
rs1277739724 3123 dbSNP
rs1032776110 3124 dbSNP
rs963566818 3126 dbSNP
rs60473805 3131 dbSNP
rs1162777233 3132 dbSNP
rs1404837603 3132 dbSNP
rs1356729063 3153 dbSNP
rs1000330251 3154 dbSNP
rs1212485362 3176 dbSNP
rs1017015995 3185 dbSNP
rs1007417066 3202 dbSNP
rs138461461 3210 dbSNP
rs1029623105 3212 dbSNP
rs1293518997 3213 dbSNP
rs1377990419 3214 dbSNP
rs548529454 3221 dbSNP
rs1274530021 3224 dbSNP
rs1364613592 3226 dbSNP
rs896739427 3227 dbSNP
rs902788405 3240 dbSNP
rs1056578939 3243 dbSNP
rs1042649407 3253 dbSNP
rs748401336 3254 dbSNP
rs186269261 3258 dbSNP
rs1314969178 3260 dbSNP
rs1180146053 3262 dbSNP
rs1421785184 3269 dbSNP
rs1054874133 3280 dbSNP
rs1429242047 3284 dbSNP
rs1466659632 3285 dbSNP
rs1369315409 3295 dbSNP
rs1436895322 3304 dbSNP
rs1313880210 3306 dbSNP
rs1168329194 3308 dbSNP
rs937766711 3312 dbSNP
rs759068548 3321 dbSNP
rs1271610210 3323 dbSNP
rs1168369239 3335 dbSNP
rs1227105281 3348 dbSNP
rs1408147063 3353 dbSNP
rs1349971180 3355 dbSNP
rs751916361 3355 dbSNP
rs927591000 3358 dbSNP
rs1277682538 3367 dbSNP
rs1442022699 3368 dbSNP
rs559659816 3382 dbSNP
rs928983481 3387 dbSNP
rs919156165 3394 dbSNP
rs973355774 3397 dbSNP
rs1244107718 3411 dbSNP
rs941410040 3412 dbSNP
rs1188009711 3432 dbSNP
rs1388792781 3435 dbSNP
rs963233534 3436 dbSNP
rs1173483127 3445 dbSNP
rs908577835 3447 dbSNP
rs1413167564 3454 dbSNP
rs1319863524 3456 dbSNP
rs1345490493 3474 dbSNP
rs983187568 3479 dbSNP
rs910382563 3483 dbSNP
rs933920669 3485 dbSNP
rs922500406 3490 dbSNP
rs1274227709 3497 dbSNP
rs975300494 3506 dbSNP
rs1225313005 3512 dbSNP
rs963891986 3531 dbSNP
rs540736255 3532 dbSNP
rs1208128777 3535 dbSNP
rs954291730 3543 dbSNP
rs1469909252 3544 dbSNP
rs1200170447 3551 dbSNP
rs1246695919 3552 dbSNP
rs17030627 3556 dbSNP
rs147123612 3563 dbSNP
rs1201750648 3566 dbSNP
rs966707830 3570 dbSNP
rs543005661 3572 dbSNP
rs1021160271 3579 dbSNP
rs1156266988 3592 dbSNP
rs1011608885 3596 dbSNP
rs1395998797 3605 dbSNP
rs893941252 3615 dbSNP
rs1233098210 3616 dbSNP
rs1322800271 3618 dbSNP
rs1333121701 3621 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084045. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uucCUCGUUCCGCCGUAGAGa 5'
             |||::|| |  |||||| 
Target 5' acaGAGUGAGACUCCAUCUCa 3'
4 - 24
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903829
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_a
Location of target site NM_024512 | 3UTR | CACUCCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903830
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_b
Location of target site NM_024512 | 3UTR | CCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903831
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_a
Location of target site NM_024512 | 3UTR | AUUGCACUCCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_024512 | 3UTR | AGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_024512 | 3UTR | ACUCCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_024512 | 3UTR | ACUCCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1084045
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep3
Location of target site ENST00000395905.3 | 3UTR | GCAACAGAGUGAGACUCCAUCUCAAAAAAAAAAAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
94 hsa-miR-4708-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT095681 RBM27 RNA binding motif protein 27 2 4
MIRT104033 USP42 ubiquitin specific peptidase 42 2 6
MIRT114773 CMPK1 cytidine/uridine monophosphate kinase 1 2 2
MIRT246923 CCND1 cyclin D1 2 2
MIRT392569 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT443949 LRIT3 leucine rich repeat, Ig-like and transmembrane domains 3 2 2
MIRT446695 PAPPA pappalysin 1 2 2
MIRT447383 VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 2 2
MIRT449321 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT449717 C1orf61 chromosome 1 open reading frame 61 2 2
MIRT449738 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 2 2
MIRT450531 PGLS 6-phosphogluconolactonase 2 2
MIRT455650 YARS tyrosyl-tRNA synthetase 2 2
MIRT458036 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT463468 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT466677 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 2 4
MIRT467789 SLC2A14 solute carrier family 2 member 14 2 2
MIRT468167 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT468652 SECISBP2L SECIS binding protein 2 like 2 6
MIRT469380 RER1 retention in endoplasmic reticulum sorting receptor 1 2 2
MIRT470346 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT472418 NCKAP1 NCK associated protein 1 2 2
MIRT474612 KLF3 Kruppel like factor 3 2 2
MIRT478703 CSRNP2 cysteine and serine rich nuclear protein 2 2 2
MIRT481008 BBC3 BCL2 binding component 3 2 4
MIRT483098 TFPI tissue factor pathway inhibitor 2 2
MIRT485113 SHISA6 shisa family member 6 2 2
MIRT497533 ZNF607 zinc finger protein 607 2 2
MIRT500644 TUBB2A tubulin beta 2A class IIa 2 6
MIRT500890 STRN striatin 2 4
MIRT501900 MED13 mediator complex subunit 13 2 2
MIRT506646 MAPK1 mitogen-activated protein kinase 1 2 4
MIRT512675 ENO4 enolase family member 4 2 2
MIRT516977 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT528754 RPS27 ribosomal protein S27 2 6
MIRT539670 ZBTB44 zinc finger and BTB domain containing 44 2 2
MIRT544129 PPIL1 peptidylprolyl isomerase like 1 2 2
MIRT546382 STOX2 storkhead box 2 2 4
MIRT562143 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT568713 TMEM30B transmembrane protein 30B 2 2
MIRT571029 CENPP centromere protein P 2 2
MIRT572781 ZNF277 zinc finger protein 277 2 2
MIRT573162 SLC30A9 solute carrier family 30 member 9 2 2
MIRT609126 NUDT3 nudix hydrolase 3 2 2
MIRT609284 OAS3 2'-5'-oligoadenylate synthetase 3 2 2
MIRT613430 GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 2 2
MIRT613770 TTC38 tetratricopeptide repeat domain 38 2 2
MIRT616645 LRAT lecithin retinol acyltransferase 2 4
MIRT630892 SLC25A33 solute carrier family 25 member 33 2 2
MIRT636526 FAXC failed axon connections homolog 2 4
MIRT641394 NUBPL nucleotide binding protein like 2 2
MIRT641412 SCN2B sodium voltage-gated channel beta subunit 2 2 2
MIRT642528 CERS4 ceramide synthase 4 2 2
MIRT643186 HYPK huntingtin interacting protein K 2 2
MIRT647800 FRMD8 FERM domain containing 8 2 2
MIRT652150 TRIM71 tripartite motif containing 71 2 2
MIRT652602 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT661606 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT666339 SKAP2 src kinase associated phosphoprotein 2 2 2
MIRT670414 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT671122 ZNF573 zinc finger protein 573 2 2
MIRT671155 ANKRD9 ankyrin repeat domain 9 2 2
MIRT671338 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT671869 ZNF429 zinc finger protein 429 2 2
MIRT671974 IKZF3 IKAROS family zinc finger 3 2 2
MIRT672064 KIAA0930 KIAA0930 2 2
MIRT672654 SLC25A16 solute carrier family 25 member 16 2 4
MIRT672673 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT672771 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672929 LRRC2 leucine rich repeat containing 2 2 2
MIRT673159 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673272 RUNDC1 RUN domain containing 1 2 2
MIRT673332 THAP1 THAP domain containing 1 2 2
MIRT673351 SLC35F6 solute carrier family 35 member F6 2 2
MIRT673667 ZNF440 zinc finger protein 440 2 2
MIRT673904 DCTN6 dynactin subunit 6 2 2
MIRT674096 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674401 MYCBP MYC binding protein 2 2
MIRT674525 PRR23A proline rich 23A 2 2
MIRT674793 NPR1 natriuretic peptide receptor 1 2 2
MIRT674833 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 2
MIRT675066 FGD6 FYVE, RhoGEF and PH domain containing 6 2 2
MIRT675080 CCR6 C-C motif chemokine receptor 6 2 2
MIRT675126 FSD2 fibronectin type III and SPRY domain containing 2 2 2
MIRT679401 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT689229 RPS19 ribosomal protein S19 2 2
MIRT694008 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT699671 SFT2D2 SFT2 domain containing 2 2 2
MIRT706213 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT706548 GJD2 gap junction protein delta 2 2 2
MIRT707418 RRP7A ribosomal RNA processing 7 homolog A 2 2
MIRT710648 GLUL glutamate-ammonia ligase 2 2
MIRT719393 NPCA1 Nasopharyngeal carcinoma 1 2 2
MIRT720166 PNPO pyridoxamine 5'-phosphate oxidase 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4708-5p Fulvestrant 17756771 NSC719276 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-4708-5p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-4708-5p Tripterygium wilfordii Hook F sensitive tissue
hsa-miR-4708-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-4708-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4708-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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