pre-miRNA Information
pre-miRNA hsa-mir-216a   
Genomic Coordinates chr2: 55988950 - 55989059
Description Homo sapiens miR-216a stem-loop
Comment This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-216a-5p
Sequence 19| UAAUCUCAGCUGGCAACUGUGA |40
Evidence Experimental
Experiments Cloned
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 15 2 - 55989027 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs757094946 2 dbSNP
rs746980700 8 dbSNP
rs1249388997 12 dbSNP
rs1188616124 15 dbSNP
rs1490501989 19 dbSNP
rs1465789697 20 dbSNP
rs370221981 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Biomarker Information
Biomarker ID Name Type Discovered From Mode Level Source Testing Methods
BA0G4V miR-216a Safety Biomarker (SAF) Clinical/Experimental Data Expression Increase Tissue .
BA0G4V miR-216a Safety Biomarker (SAF) Clinical/Experimental Data Expression Increase Plasma MiRNA qPCR analyses
Gene Information
Gene Symbol APAF1   
Synonyms APAF-1, CED4
Description apoptotic peptidase activating factor 1
Transcript NM_181869   
Other Transcripts NM_013229 , NM_181861 , NM_181868 , NM_001160   
Expression
Putative miRNA Targets on APAF1
3'UTR of APAF1
(miRNA target sites are highlighted)
>APAF1|NM_181869|3'UTR
   1 GAAAATACACGTGTCCCCTGACTTCAAAACATATGTGACTGTGGATAATCTTGGTATTTTATATATTTTACAGACTTTAG
  81 AATAAAATAGTTAAGCATTAATGTAGTTGAACTTTTTAAATTTTTGAATTGGAAAAAAATTCTAATGAAACCCTGATATC
 161 AACTTTTTATAAAGCTCTTAATTGTTGTGCAGTATTGCATTCATTACAAAAGTGTTTGTGGTTGGATGAATAATATTAAT
 241 GTAGCTTTTTCCCAAATGAACATACCTTTAATCTTGTTTTTCATGATCATCATTAACAGTTTGTCCTTAGGATGCAAATG
 321 AAAATGTGAATACATACCTTGTTGTACTGTTGGTAAAATTCTGTCTTGATGCATTCAAAATGGTTGACATAATTAATGAG
 401 AAGAATTTGGAAGAAATTGGTATTTTAATACTGTCTGTATTTATTACTGTTATGCAGGCTGTGCCTCAGGGTAGCAGTGG
 481 CCTGCTTTTTGAACCACACTTACCCCAAGGGGGTTTTGTTCTCCTAAATACAATCTTAGAGGTTTTTTGCACTCTTTAAA
 561 TTTGCTTTAAAAATATTGTGTCTGTGTGCATAGTCTGCAGCATTTCCTTTAATTGACTCAATAAGTGAGTCTTGGATTTA
 641 GCAGGCCCCCCCACCTTTTTTTTTTGTTTTTGGAGACAGAGTCTTGCTTTGTTGCCAGGCTGGAGTGCAGTGGCGCGATC
 721 TCGGCTCACCACAATCGCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGTGT
 801 GCGCACATGCCAGGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCGGGATGGTCTCGATCTCTTG
 881 ACCTCATGATCTACCCGCCTTGGCCTCCCAAAGTGCTGAGATTACAGGCGTGAGCCACCGTGCCTGGCCAGGCCCCTTCT
 961 CTTTTAATGGAGACAGGGTCTTGCACTATCACCCAGGCTGGAGTGCAGTGGCATAATCATACCTCATTGCAGCCTCAGAC
1041 TCCTGGGTTCAAGCAATCCTCCTGCCTCAGCCTCCCAAGTAGCTGAGACTACAGGCACGAGCCACCACACCCAGCTAATT
1121 TTTAAGTTTTCTTGTAGAGACAGGGTCTCACTATGTTGTCTAGGCTGGTCTTGAACTCTTGGCCTCAAGTAATCCTCCTG
1201 CCTCAGCCTCCCAAAGTGTTGGGATTGCAGATATGAGCCACTGGCCTGGCCTTCAGCAGTTCTTTTTGTGAAGTAAAACT
1281 TGTATGTTGGAAAGAGTAGATTTTATTGGTCTACCCTTTTCTCACTGTAGCTGCTGGCAGCCCTGTGCCATATCTGGACT
1361 CTAGTTGTCAGTATCTGAGTTGGACACTATTCCTGCTCCCTCTTGTTTCTTACATATCAGACTTCTTACTTGAATGAAAC
1441 CTGATCTTTCCTAATCCTCACTTTTTTCTTTTTTAAAAAGCAGTTTCTCCACTGCTAAATGTTAGTCATTGAGGTGGGGC
1521 CAATTTTAATCATAAGCCTTAATAAGATTTTTCTAAGAAATGTGAAATAGAACAATTTTCATCTAATTCCATTTACTTTT
1601 AGATGAATGGCATTGTGAATGCCATTCTTTTAATGAATTTCAAGAGAATTCTCTGGTTTTCTGTGTAATTCCAGATGAGT
1681 CACTGTAACTCTAGAAGATTAACCTTCCAGCCAACCTATTTTCCTTTCCCTTGTCTCTCTCATCCTCTTTTCCTTCCTTC
1761 TTTCCTTTCTCTTCTTTTATCTCCAAGGTTAATCAGGAAAAATAGCTTTTGACAGGGGAAAAAACTCAATAACTAGCTAT
1841 TTTTGACCTCCTGATCAGGAACTTTAGTTGAAGCGTAAATCTAAAGAAACATTTTCTCTGAAATATATTATTAAGGGCAA
1921 TGGAGATAAATTAATAGTAGATGTGGTTCCCAGAAAATATAATCAAAATTCAAAGATTTTTTTTGTTTCTGTAACTGGAA
2001 CTAAATCAAATGATTACTAGTGTTAATAGTAGATAACTTGTTTTTATTGTTGGTGCATATTAGTATAACTGTGGGGTAGG
2081 TCGGGGAGAGGGTAAGGGAATAGATCACTCAGATGTATTTTAGATAAGCTATTTAGCCTTTGATGGAATCATAAATACAG
2161 TGAATACAATCCTTTGCATTGTTAAGGAGGTTTTTTGTTTTTAAATGGTGGGTCAAGGAGCTAGTTTACAGGCTTACTGT
2241 GATTTAAGCAAATGTGAAAAGTGAAACCTTAATTTTATCAAAAGAAATTTCTGTAAATGGTATGTCTCCTTAGAATACCC
2321 AAATCATAATTTTATTTGTACACACTGTTAGGGGCTCATCTCATGTAGGCAGAGTATAAAGTATTACCTTTTGGAATTAA
2401 AAGCCACTGACTGTTATAAAGTATAACAACACACATCAGGTTTTAAAAAGCCTTGAATGGCCCTTGTCTTAAAAAGAAAT
2481 TAGGAGCCAGGTGCGGTGGCACGTGCCTGTAATCCCAGCTCCTTGGGAGGCTAAGACAGGAGGATTCCTTGAGCCCTGGA
2561 GTTTGAGTCCAGCCTGGGTGACATAGCAAGACCCTGTCTTAAAAGAAAAATGGGAAGAAAGACAAGGTAACATGAAGAAA
2641 GAAGAGATACCTAGTATGATGGAGCTGCAAATTTCATGGCAGTTCATGCAGTCGGTCAAGAGGAGGATTTTGTTTTGTAG
2721 TTTGCAGATGAGCATTTCTAAAGCATTTTCCCTTGCTGTATTTTTTTGTATTATAAATTACATTGGACTTCATATATATA
2801 ATTTTTTTTTACATTATATGTCTCTTGTATGTTTTGAAACTCTTGTATTTATGATATAGCTTATATGATTTTTTTGCCTT
2881 GGTATACATTTTAAAATATGAATTTAAAAAATTTTTGTAAAAATAAAATTCACAAAATTGTTTTGAAAAACAAAAAAAAA
2961 AAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agugucaACGGU----CGACUCUAAu 5'
                 | |||    ||||||||| 
Target 5' cttggccTCCCAAAGTGCTGAGATTa 3'
899 - 924 153.00 -15.10
2
miRNA  3' aguGUC-AACGGU----CGACUCUAAu 5'
             |||  | |||    |:||:|||| 
Target 5' cctCAGCCTCCCAAAGTGTTGGGATTg 3'
1201 - 1227 137.00 -13.20
3
miRNA  3' agUGUCAACGGUCGACUC-UAAu 5'
            ::||||  ||| |||| ||| 
Target 5' ttGTAGTTTGCAGATGAGCATTt 3'
2715 - 2737 136.00 -10.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM1365091 12 COSMIC
COSM5443028 16 COSMIC
COSM236690 18 COSMIC
COSM5890669 24 COSMIC
COSM7633833 51 COSMIC
COSM9275239 68 COSMIC
COSM5558470 69 COSMIC
COSM4789083 80 COSMIC
COSN31604422 120 COSMIC
COSN18736275 140 COSMIC
COSN31580311 159 COSMIC
COSN19037804 239 COSMIC
COSN31882044 455 COSMIC
COSN24216807 654 COSMIC
COSN29164546 1075 COSMIC
COSN20110001 1440 COSMIC
COSN21625017 1593 COSMIC
COSN6538084 1687 COSMIC
COSN20785323 1738 COSMIC
COSN25773491 1876 COSMIC
COSN28774781 2164 COSMIC
COSN26646123 2198 COSMIC
COSN30161476 2232 COSMIC
COSN16128806 2258 COSMIC
COSN5872645 2380 COSMIC
COSN31567467 2382 COSMIC
COSN25926631 2516 COSMIC
COSN30053889 2728 COSMIC
COSN29472808 2768 COSMIC
COSN31578320 2937 COSMIC
rs116928965 2614 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs752622248 3 dbSNP
rs756138161 6 dbSNP
rs1397034513 7 dbSNP
rs777810915 9 dbSNP
rs1158662598 11 dbSNP
rs201029707 12 dbSNP
rs778485671 13 dbSNP
rs745529226 16 dbSNP
rs369751053 17 dbSNP
rs1440143134 18 dbSNP
rs1323792662 19 dbSNP
rs142230441 21 dbSNP
rs902945001 25 dbSNP
rs746482334 27 dbSNP
rs769157410 28 dbSNP
rs1331776919 34 dbSNP
rs372861046 35 dbSNP
rs1397949057 38 dbSNP
rs1229819694 41 dbSNP
rs1336372390 45 dbSNP
rs762226148 46 dbSNP
rs1373951430 53 dbSNP
rs1269220874 55 dbSNP
rs770194972 56 dbSNP
rs1433218417 61 dbSNP
rs375449857 62 dbSNP
rs763208735 63 dbSNP
rs1488857310 71 dbSNP
rs1176645020 72 dbSNP
rs1189146612 73 dbSNP
rs1248721343 77 dbSNP
rs369724536 79 dbSNP
rs1160150643 81 dbSNP
rs751718621 83 dbSNP
rs118102803 89 dbSNP
rs375966404 90 dbSNP
rs753812248 92 dbSNP
rs968617287 104 dbSNP
rs1225828520 105 dbSNP
rs1297146535 110 dbSNP
rs1256664016 112 dbSNP
rs1370515842 127 dbSNP
rs1205685152 132 dbSNP
rs1016586071 136 dbSNP
rs1288588116 137 dbSNP
rs979573876 138 dbSNP
rs963280514 155 dbSNP
rs993292310 160 dbSNP
rs1373347578 162 dbSNP
rs1244582939 172 dbSNP
rs571007553 178 dbSNP
rs1445703144 189 dbSNP
rs1374608282 208 dbSNP
rs1033710763 210 dbSNP
rs1466467003 214 dbSNP
rs1361110314 241 dbSNP
rs1225245897 242 dbSNP
rs1173336133 246 dbSNP
rs1290988539 267 dbSNP
rs758919119 277 dbSNP
rs951484146 284 dbSNP
rs1159652693 286 dbSNP
rs147973432 292 dbSNP
rs1202967772 300 dbSNP
rs1035723923 331 dbSNP
rs1440475633 334 dbSNP
rs1184165863 339 dbSNP
rs1483859332 343 dbSNP
rs1327741762 360 dbSNP
rs1237047136 367 dbSNP
rs543214134 372 dbSNP
rs17227606 373 dbSNP
rs1239650003 375 dbSNP
rs1446615006 384 dbSNP
rs574891254 390 dbSNP
rs1396601173 391 dbSNP
rs541930021 398 dbSNP
rs1378264456 399 dbSNP
rs947586974 400 dbSNP
rs977602094 403 dbSNP
rs1360804864 418 dbSNP
rs376693352 421 dbSNP
rs1417462028 437 dbSNP
rs933077694 440 dbSNP
rs1408149606 453 dbSNP
rs370287396 454 dbSNP
rs575996323 458 dbSNP
rs1167349526 459 dbSNP
rs1355032916 460 dbSNP
rs1424910450 468 dbSNP
rs888820689 471 dbSNP
rs943026290 474 dbSNP
rs930461859 478 dbSNP
rs752707499 482 dbSNP
rs1384586349 486 dbSNP
rs1263967317 493 dbSNP
rs1216236559 499 dbSNP
rs899094944 510 dbSNP
rs115805629 512 dbSNP
rs910282366 513 dbSNP
rs546217051 516 dbSNP
rs906363434 524 dbSNP
rs1216226948 536 dbSNP
rs187945549 552 dbSNP
rs1040026640 558 dbSNP
rs902097254 560 dbSNP
rs1397827185 565 dbSNP
rs1366982661 566 dbSNP
rs1295673315 577 dbSNP
rs958780733 578 dbSNP
rs1349626253 579 dbSNP
rs1275775833 584 dbSNP
rs748863900 585 dbSNP
rs991908570 587 dbSNP
rs1192951413 591 dbSNP
rs1021600743 594 dbSNP
rs1458591067 603 dbSNP
rs768516013 621 dbSNP
rs1210246325 624 dbSNP
rs1488058589 632 dbSNP
rs968974385 633 dbSNP
rs1043023946 635 dbSNP
rs1200517721 637 dbSNP
rs1318513531 642 dbSNP
rs1277028151 646 dbSNP
rs977649550 646 dbSNP
rs1332489814 648 dbSNP
rs1301589441 650 dbSNP
rs116884285 652 dbSNP
rs368133650 653 dbSNP
rs1188433734 654 dbSNP
rs1401586096 655 dbSNP
rs1281557330 656 dbSNP
rs1464096787 656 dbSNP
rs933466736 666 dbSNP
rs1199913684 667 dbSNP
rs1432811777 667 dbSNP
rs987276468 668 dbSNP
rs1180208916 671 dbSNP
rs1474342274 673 dbSNP
rs1169399786 677 dbSNP
rs562116231 678 dbSNP
rs780615265 678 dbSNP
rs1196639885 685 dbSNP
rs1033743464 692 dbSNP
rs1256056724 693 dbSNP
rs1469184103 707 dbSNP
rs1037785643 715 dbSNP
rs1173644067 716 dbSNP
rs772060174 717 dbSNP
rs1013543249 718 dbSNP
rs1317282671 719 dbSNP
rs372020077 723 dbSNP
rs1429125009 737 dbSNP
rs929254223 738 dbSNP
rs961669332 739 dbSNP
rs1319250483 741 dbSNP
rs111382335 742 dbSNP
rs1160261786 746 dbSNP
rs547213421 748 dbSNP
rs1440121600 757 dbSNP
rs192421145 764 dbSNP
rs539090638 767 dbSNP
rs1176760120 769 dbSNP
rs550912589 779 dbSNP
rs185285999 780 dbSNP
rs1201103693 789 dbSNP
rs1342464674 795 dbSNP
rs1261348442 797 dbSNP
rs1445470991 798 dbSNP
rs1195085681 799 dbSNP
rs1263551705 801 dbSNP
rs773119241 803 dbSNP
rs1003788569 804 dbSNP
rs1197260661 807 dbSNP
rs1431348013 808 dbSNP
rs1466143622 810 dbSNP
rs1354932127 814 dbSNP
rs536911775 815 dbSNP
rs1033482536 825 dbSNP
rs555558578 831 dbSNP
rs1342720628 839 dbSNP
rs573780976 841 dbSNP
rs760792555 842 dbSNP
rs12307986 843 dbSNP
rs1300333818 845 dbSNP
rs1012976563 848 dbSNP
rs554013473 851 dbSNP
rs1379525699 853 dbSNP
rs1156538685 858 dbSNP
rs866861020 861 dbSNP
rs1368933687 862 dbSNP
rs968695342 864 dbSNP
rs187456676 873 dbSNP
rs1264680159 893 dbSNP
rs922964327 897 dbSNP
rs541603444 898 dbSNP
rs1031927346 901 dbSNP
rs1234114816 907 dbSNP
rs4450213 917 dbSNP
rs1359110794 930 dbSNP
rs1260167962 940 dbSNP
rs1042667061 941 dbSNP
rs766414508 945 dbSNP
rs546229225 955 dbSNP
rs954945703 958 dbSNP
rs375602833 972 dbSNP
rs188204280 989 dbSNP
rs140030216 994 dbSNP
rs964836290 995 dbSNP
rs1055181303 999 dbSNP
rs1315985030 1000 dbSNP
rs1406837862 1002 dbSNP
rs747092806 1004 dbSNP
rs895316251 1019 dbSNP
rs1162641420 1020 dbSNP
rs1219939279 1026 dbSNP
rs543790149 1029 dbSNP
rs1013659413 1034 dbSNP
rs1271028490 1040 dbSNP
rs1193676043 1057 dbSNP
rs562393330 1059 dbSNP
rs192992501 1067 dbSNP
rs1214135901 1069 dbSNP
rs1180512966 1075 dbSNP
rs1291015465 1085 dbSNP
rs1131019 1092 dbSNP
rs961426364 1096 dbSNP
rs143208155 1099 dbSNP
rs1026245399 1100 dbSNP
rs776940896 1111 dbSNP
rs952025064 1135 dbSNP
rs984622581 1137 dbSNP
rs1252331306 1147 dbSNP
rs1047344827 1153 dbSNP
rs1470964302 1154 dbSNP
rs1452443848 1159 dbSNP
rs1331526129 1171 dbSNP
rs12829605 1173 dbSNP
rs532822025 1180 dbSNP
rs975856549 1189 dbSNP
rs922994856 1193 dbSNP
rs1301651877 1197 dbSNP
rs184748337 1205 dbSNP
rs1387817272 1206 dbSNP
rs865866330 1215 dbSNP
rs1464616664 1217 dbSNP
rs1306403221 1222 dbSNP
rs894963528 1231 dbSNP
rs1247659577 1236 dbSNP
rs1198526750 1237 dbSNP
rs188259081 1258 dbSNP
rs1043157215 1262 dbSNP
rs925565865 1263 dbSNP
rs1317425620 1266 dbSNP
rs180779783 1271 dbSNP
rs1310318800 1276 dbSNP
rs1221222615 1280 dbSNP
rs1358972723 1283 dbSNP
rs1031644756 1291 dbSNP
rs1055297552 1292 dbSNP
rs549041592 1294 dbSNP
rs1220007150 1295 dbSNP
rs1438382589 1298 dbSNP
rs1293627963 1299 dbSNP
rs1488770895 1311 dbSNP
rs895348769 1315 dbSNP
rs955143409 1316 dbSNP
rs567542438 1317 dbSNP
rs531488001 1325 dbSNP
rs553163136 1326 dbSNP
rs964898658 1332 dbSNP
rs572588413 1335 dbSNP
rs1384275970 1348 dbSNP
rs973165353 1351 dbSNP
rs920346642 1362 dbSNP
rs758831215 1379 dbSNP
rs1442339737 1381 dbSNP
rs1179881108 1383 dbSNP
rs950435537 1386 dbSNP
rs1231256522 1393 dbSNP
rs539913464 1395 dbSNP
rs1370495990 1415 dbSNP
rs1212261965 1423 dbSNP
rs1443240530 1430 dbSNP
rs983090674 1436 dbSNP
rs11296996 1437 dbSNP
rs398020798 1437 dbSNP
rs1309706087 1455 dbSNP
rs1239338266 1457 dbSNP
rs1298174071 1462 dbSNP
rs994191785 1466 dbSNP
rs1371016467 1469 dbSNP
rs939286488 1476 dbSNP
rs1448071394 1486 dbSNP
rs1358038366 1487 dbSNP
rs558264298 1488 dbSNP
rs1394931744 1494 dbSNP
rs139964896 1501 dbSNP
rs1159558701 1508 dbSNP
rs1419018765 1515 dbSNP
rs888450118 1517 dbSNP
rs1332071520 1530 dbSNP
rs1006175154 1531 dbSNP
rs752094345 1534 dbSNP
rs1483645171 1536 dbSNP
rs1256875325 1543 dbSNP
rs755727824 1549 dbSNP
rs145416277 1556 dbSNP
rs1489352820 1557 dbSNP
rs562294713 1561 dbSNP
rs574225129 1565 dbSNP
rs183510672 1574 dbSNP
rs1322161252 1592 dbSNP
rs1030094657 1597 dbSNP
rs1226412396 1598 dbSNP
rs1315087148 1615 dbSNP
rs773089739 1620 dbSNP
rs977866014 1621 dbSNP
rs748981340 1622 dbSNP
rs1377884581 1623 dbSNP
rs1290900114 1632 dbSNP
rs936328032 1652 dbSNP
rs1198750019 1657 dbSNP
rs559484281 1659 dbSNP
rs991055898 1682 dbSNP
rs1299218698 1704 dbSNP
rs998911538 1705 dbSNP
rs879179549 1708 dbSNP
rs916808744 1717 dbSNP
rs949570240 1719 dbSNP
rs1167590780 1732 dbSNP
rs1459703272 1734 dbSNP
rs374060808 1742 dbSNP
rs386765656 1742 dbSNP
rs754516281 1742 dbSNP
rs890444437 1742 dbSNP
rs6538881 1743 dbSNP
rs6538882 1744 dbSNP
rs900711296 1750 dbSNP
rs187010424 1770 dbSNP
rs1027748990 1772 dbSNP
rs1222301713 1792 dbSNP
rs564727447 1793 dbSNP
rs191552272 1800 dbSNP
rs1006875885 1808 dbSNP
rs1270743157 1812 dbSNP
rs35746294 1815 dbSNP
rs778619034 1820 dbSNP
rs747950449 1830 dbSNP
rs145263832 1844 dbSNP
rs1031993716 1860 dbSNP
rs1335600352 1863 dbSNP
rs997358006 1864 dbSNP
rs567458422 1875 dbSNP
rs1458875269 1876 dbSNP
rs966562217 1887 dbSNP
rs1162912491 1891 dbSNP
rs1467283316 1892 dbSNP
rs1304875443 1903 dbSNP
rs528353606 1907 dbSNP
rs999711842 1921 dbSNP
rs142293344 1927 dbSNP
rs532475117 1935 dbSNP
rs916506266 1937 dbSNP
rs1191495162 1942 dbSNP
rs771831357 1947 dbSNP
rs1251019706 1976 dbSNP
rs957720499 1977 dbSNP
rs979273919 1977 dbSNP
rs990419629 1979 dbSNP
rs1293116199 1982 dbSNP
rs151008594 1984 dbSNP
rs1313522541 1992 dbSNP
rs1303887363 2003 dbSNP
rs111495253 2008 dbSNP
rs890491538 2010 dbSNP
rs1324526399 2027 dbSNP
rs1219091850 2030 dbSNP
rs181602728 2034 dbSNP
rs1039410730 2045 dbSNP
rs1379539931 2051 dbSNP
rs140896989 2062 dbSNP
rs1211578825 2064 dbSNP
rs1453618386 2070 dbSNP
rs1256278335 2074 dbSNP
rs1485313767 2076 dbSNP
rs900764990 2077 dbSNP
rs1180497549 2080 dbSNP
rs918782899 2083 dbSNP
rs1249220876 2084 dbSNP
rs958272546 2092 dbSNP
rs73142318 2099 dbSNP
rs570134342 2104 dbSNP
rs771023796 2105 dbSNP
rs942690072 2108 dbSNP
rs1429188973 2112 dbSNP
rs1301696665 2113 dbSNP
rs1242956254 2114 dbSNP
rs1336810594 2123 dbSNP
rs1468333708 2126 dbSNP
rs1178295597 2130 dbSNP
rs1328299184 2132 dbSNP
rs1039692589 2134 dbSNP
rs900422581 2149 dbSNP
rs1404407247 2156 dbSNP
rs1303695373 2157 dbSNP
rs776516384 2167 dbSNP
rs1453272904 2168 dbSNP
rs1434330104 2170 dbSNP
rs1286904946 2173 dbSNP
rs997876367 2174 dbSNP
rs1051675099 2175 dbSNP
rs1160170588 2179 dbSNP
rs1400379051 2190 dbSNP
rs1282605662 2191 dbSNP
rs759810056 2198 dbSNP
rs1425087162 2206 dbSNP
rs1220477014 2208 dbSNP
rs769977477 2213 dbSNP
rs1315974341 2219 dbSNP
rs1209791354 2222 dbSNP
rs960698921 2228 dbSNP
rs1278651266 2255 dbSNP
rs767196527 2257 dbSNP
rs1352076784 2279 dbSNP
rs537050382 2280 dbSNP
rs867517776 2282 dbSNP
rs1279530203 2300 dbSNP
rs1237494868 2301 dbSNP
rs990509490 2313 dbSNP
rs1293983376 2315 dbSNP
rs1287707329 2320 dbSNP
rs1414406924 2340 dbSNP
rs1373810083 2344 dbSNP
rs555689924 2352 dbSNP
rs776724492 2357 dbSNP
rs1023695100 2358 dbSNP
rs1011872930 2364 dbSNP
rs1023299004 2365 dbSNP
rs1489511467 2375 dbSNP
rs1368609740 2378 dbSNP
rs1186591768 2418 dbSNP
rs1474049288 2422 dbSNP
rs1217762966 2425 dbSNP
rs1193881262 2429 dbSNP
rs1268857381 2435 dbSNP
rs371739358 2441 dbSNP
rs967976364 2455 dbSNP
rs574265054 2460 dbSNP
rs60760345 2463 dbSNP
rs923798637 2464 dbSNP
rs1418734846 2473 dbSNP
rs1157270607 2481 dbSNP
rs935150135 2482 dbSNP
rs1280363030 2492 dbSNP
rs986999919 2495 dbSNP
rs1362658181 2496 dbSNP
rs911988109 2503 dbSNP
rs763463259 2504 dbSNP
rs553229264 2508 dbSNP
rs1131020 2513 dbSNP
rs577850295 2517 dbSNP
rs1163634283 2518 dbSNP
rs1459442199 2523 dbSNP
rs1302251078 2530 dbSNP
rs1363673084 2533 dbSNP
rs1131021 2534 dbSNP
rs1474837266 2536 dbSNP
rs545187407 2538 dbSNP
rs1438442650 2539 dbSNP
rs1191465040 2554 dbSNP
rs1453880471 2562 dbSNP
rs1274944865 2566 dbSNP
rs1254217196 2570 dbSNP
rs918826263 2571 dbSNP
rs1372059732 2575 dbSNP
rs563089249 2583 dbSNP
rs951647904 2584 dbSNP
rs1039051134 2586 dbSNP
rs1260004520 2588 dbSNP
rs1215448535 2594 dbSNP
rs1338968876 2595 dbSNP
rs1268250630 2597 dbSNP
rs1438310824 2601 dbSNP
rs116928965 2614 dbSNP
rs1049295050 2615 dbSNP
rs909974847 2628 dbSNP
rs752145548 2633 dbSNP
rs1416915395 2639 dbSNP
rs1173933565 2644 dbSNP
rs1455875870 2645 dbSNP
rs886649915 2645 dbSNP
rs1005011301 2651 dbSNP
rs1467525651 2652 dbSNP
rs1240169670 2654 dbSNP
rs1450398022 2662 dbSNP
rs942722787 2663 dbSNP
rs1271185762 2664 dbSNP
rs1221105014 2671 dbSNP
rs1057002696 2677 dbSNP
rs762349701 2680 dbSNP
rs1224350286 2686 dbSNP
rs765914551 2694 dbSNP
rs933989834 2695 dbSNP
rs1279676518 2700 dbSNP
rs1440884193 2703 dbSNP
rs1352215153 2704 dbSNP
rs186272491 2713 dbSNP
rs1434883003 2717 dbSNP
rs1376516871 2718 dbSNP
rs902400573 2725 dbSNP
rs116289685 2731 dbSNP
rs1410762382 2735 dbSNP
rs1000823614 2744 dbSNP
rs760417324 2751 dbSNP
rs1382425323 2752 dbSNP
rs201081099 2761 dbSNP
rs3834481 2761 dbSNP
rs12159 2764 dbSNP
rs1213295732 2769 dbSNP
rs1162703232 2783 dbSNP
rs1411292712 2784 dbSNP
rs1406868773 2787 dbSNP
rs893640468 2788 dbSNP
rs1324206869 2792 dbSNP
rs1223091053 2800 dbSNP
rs113354620 2802 dbSNP
rs879925687 2802 dbSNP
rs986664169 2802 dbSNP
rs1023326440 2803 dbSNP
rs1433282718 2805 dbSNP
rs1353820924 2821 dbSNP
rs1160485194 2822 dbSNP
rs906233648 2823 dbSNP
rs1003188046 2825 dbSNP
rs1405965394 2825 dbSNP
rs1439451476 2830 dbSNP
rs1475684476 2831 dbSNP
rs1257033566 2835 dbSNP
rs1332731854 2840 dbSNP
rs1486735597 2844 dbSNP
rs1261028681 2845 dbSNP
rs1377220111 2858 dbSNP
rs1215069198 2860 dbSNP
rs1451373782 2861 dbSNP
rs930644805 2862 dbSNP
rs1314810193 2865 dbSNP
rs1333476528 2868 dbSNP
rs528420939 2869 dbSNP
rs1401400045 2882 dbSNP
rs1026330077 2883 dbSNP
rs908143667 2885 dbSNP
rs1289811532 2886 dbSNP
rs546952447 2887 dbSNP
rs1430713455 2895 dbSNP
rs1230383369 2900 dbSNP
rs1167235582 2918 dbSNP
rs1462057006 2931 dbSNP
rs1291285509 2932 dbSNP
rs140352209 2939 dbSNP
rs1430520165 2953 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084045. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' agugucAACGGUCG-ACUCuaau 5'
                || | :|| ||||    
Target 5' ------UUACAGGCGUGAGccac 3'
1 - 17
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084045
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep3
Location of target site ENST00000333991.1 | 3UTR | UUACAGGCGUGAGCCACCGUGCCUGGCCAGGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla 0.641 9.1e-3 0.545 2.7e-2 13 Click to see details
GSE42095 Differentiated embryonic stem cells -0.437 1.9e-2 -0.146 2.5e-1 23 Click to see details
GSE28544 Breast cancer -0.419 2.1e-2 -0.416 2.2e-2 24 Click to see details
GSE26953 Aortic valvular endothelial cells -0.378 3.4e-2 -0.425 1.9e-2 24 Click to see details
GSE14794 Lymphoblastoid cells -0.123 1.2e-1 -0.095 1.9e-1 90 Click to see details
GSE21849 B cell lymphoma 0.196 1.5e-1 0.310 5.1e-2 29 Click to see details
GSE17306 Multiple myeloma 0.123 2.0e-1 0.440 7.8e-4 49 Click to see details
GSE21687 Ependynoma primary tumors -0.103 2.1e-1 -0.160 1.0e-1 64 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.162 2.2e-1 0.149 2.4e-1 25 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.146 2.7e-1 -0.627 1.5e-3 20 Click to see details
GSE32688 Pancreatic cancer -0.107 2.8e-1 -0.128 2.4e-1 32 Click to see details
GSE35602 Colorectal cancer stromal tissue -0.097 3.2e-1 0.415 2.0e-2 25 Click to see details
GSE17498 Multiple myeloma 0.066 3.4e-1 0.067 3.4e-1 40 Click to see details
GSE27834 Pluripotent stem cells -0.101 3.5e-1 -0.015 4.8e-1 16 Click to see details
GSE38226 Liver fibrosis 0.064 3.9e-1 0.330 7.2e-2 21 Click to see details
GSE19350 CNS germ cell tumors 0.046 4.4e-1 0.404 9.6e-2 12 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
BLCA 0.735 0.01 0.915 0 10 Click to see details
KIRP -0.545 0.01 -0.529 0.01 18 Click to see details
UCEC -0.588 0.04 -0.515 0.06 10 Click to see details
LUSC -0.37 0.05 -0.370 0.05 20 Click to see details
STAD -0.279 0.12 -0.257 0.14 20 Click to see details
KICH 0.382 0.12 0.482 0.07 11 Click to see details
CHOL -0.38 0.18 -0.310 0.23 8 Click to see details
KIRC -0.171 0.19 0.068 0.36 29 Click to see details
PRAD 0.162 0.19 -0.065 0.36 31 Click to see details
PAAD -0.548 0.23 -0.400 0.3 4 Click to see details
ESCA 0.481 0.26 0.400 0.3 4 Click to see details
BRCA -0.122 0.28 -0.095 0.33 25 Click to see details
THCA 0.083 0.29 0.091 0.27 47 Click to see details
HNSC -0.115 0.3 -0.093 0.34 23 Click to see details
LIHC -0.023 0.44 -0.021 0.45 45 Click to see details
LUAD 0.022 0.48 -0.050 0.45 9 Click to see details
LUAD 0.022 0.48 -0.050 0.45 9 Click to see details
LUAD 0.022 0.48 -0.050 0.45 9 Click to see details
148 hsa-miR-216a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT000534 PTEN phosphatase and tensin homolog 4 3
MIRT005018 SIRT1 sirtuin 1 3 1
MIRT005964 CDC42 cell division cycle 42 2 1
MIRT005969 CD44 CD44 molecule (Indian blood group) 2 1
MIRT007154 SMAD7 SMAD family member 7 1 1
MIRT054887 BECN1 beclin 1 5 3
MIRT067588 METAP2 methionyl aminopeptidase 2 2 6
MIRT099144 MYLIP myosin regulatory light chain interacting protein 2 12
MIRT162313 TGFBR2 transforming growth factor beta receptor 2 2 2
MIRT230668 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT256274 PHAX phosphorylated adaptor for RNA export 2 2
MIRT386817 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT386825 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT438816 HNF4A hepatocyte nuclear factor 4 alpha 1 1
MIRT464699 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 2
MIRT465962 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 2
MIRT466046 TMEM189 transmembrane protein 189 2 2
MIRT466482 TECPR2 tectonin beta-propeller repeat containing 2 2 7
MIRT472209 NGFRAP1 brain expressed X-linked 3 2 4
MIRT472562 NACC1 nucleus accumbens associated 1 2 4
MIRT478921 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT480121 CALR calreticulin 2 2
MIRT497754 OXGR1 oxoglutarate receptor 1 2 2
MIRT497967 TWISTNB TWIST neighbor 2 2
MIRT502882 CDK4 cyclin dependent kinase 4 2 8
MIRT510191 MON1B MON1 homolog B, secretory trafficking associated 2 4
MIRT512407 CD84 CD84 molecule 2 2
MIRT513739 PSD3 pleckstrin and Sec7 domain containing 3 2 4
MIRT526257 DROSHA drosha ribonuclease III 2 2
MIRT528968 FAM19A3 family with sequence similarity 19 member A3, C-C motif chemokine like 2 2
MIRT529599 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT529776 ZNF486 zinc finger protein 486 2 2
MIRT530110 PSAPL1 prosaposin like 1 (gene/pseudogene) 2 2
MIRT530504 FADS6 fatty acid desaturase 6 2 2
MIRT531437 PAK1 p21 (RAC1) activated kinase 1 2 2
MIRT534445 SDR16C5 short chain dehydrogenase/reductase family 16C member 5 2 2
MIRT537286 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT538451 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT543085 ACTB actin beta 2 2
MIRT550982 ZNF254 zinc finger protein 254 2 2
MIRT556259 MAPRE2 microtubule associated protein RP/EB family member 2 2 2
MIRT556639 LAMC1 laminin subunit gamma 1 2 2
MIRT559127 C11orf57 chromosome 11 open reading frame 57 2 2
MIRT561405 TUBB2A tubulin beta 2A class IIa 2 2
MIRT569677 SEC23B Sec23 homolog B, coat complex II component 2 4
MIRT574660 KLHL15 kelch like family member 15 2 2
MIRT575030 Tecpr2 tectonin beta-propeller repeat containing 2 2 5
MIRT617683 JRKL JRK like 2 2
MIRT618540 SEMA5A semaphorin 5A 2 2
MIRT620805 C1orf27 chromosome 1 open reading frame 27 2 2
MIRT621569 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT622133 SP4 Sp4 transcription factor 2 2
MIRT624913 CTCFL CCCTC-binding factor like 2 2
MIRT625010 PAK4 p21 (RAC1) activated kinase 4 2 2
MIRT626644 ZNF551 zinc finger protein 551 2 2
MIRT626646 ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 2 2
MIRT626672 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT627945 NNT nicotinamide nucleotide transhydrogenase 2 2
MIRT627963 NLK nemo like kinase 2 2
MIRT628767 SRSF7 serine and arginine rich splicing factor 7 2 2
MIRT629261 KDM2B lysine demethylase 2B 2 2
MIRT629422 ADM2 adrenomedullin 2 2 2
MIRT630238 SORD sorbitol dehydrogenase 2 2
MIRT631272 CENPM centromere protein M 2 4
MIRT631793 CLK4 CDC like kinase 4 2 2
MIRT632058 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT632485 RPS15A ribosomal protein S15a 2 2
MIRT632611 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT632708 MTA3 metastasis associated 1 family member 3 2 2
MIRT632815 INO80 INO80 complex subunit 2 2
MIRT635956 PLA2G12A phospholipase A2 group XIIA 2 2
MIRT636152 UBXN2A UBX domain protein 2A 2 2
MIRT636899 C5orf45 MRN complex interacting protein 2 4
MIRT636930 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT637457 ZNF324B zinc finger protein 324B 2 2
MIRT637900 SLC19A3 solute carrier family 19 member 3 2 2
MIRT639826 ZNF638 zinc finger protein 638 2 2
MIRT640445 ERVMER34-1 endogenous retrovirus group MER34 member 1, envelope 2 2
MIRT640681 ARSK arylsulfatase family member K 2 2
MIRT641611 CAPN7 calpain 7 2 2
MIRT641676 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT646786 IL23R interleukin 23 receptor 2 2
MIRT648352 A2ML1 alpha-2-macroglobulin like 1 2 2
MIRT649144 SPATA5 spermatogenesis associated 5 2 2
MIRT649254 TRIM65 tripartite motif containing 65 2 2
MIRT652491 TMEM178B transmembrane protein 178B 2 2
MIRT653308 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT653945 SEPSECS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase 2 2
MIRT654212 RNF19B ring finger protein 19B 2 2
MIRT654839 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT655159 PHF21A PHD finger protein 21A 2 2
MIRT655316 PDCD11 programmed cell death 11 2 2
MIRT655375 PAX3 paired box 3 2 2
MIRT657301 HOXB5 homeobox B5 2 2
MIRT657593 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT658460 FAM117B family with sequence similarity 117 member B 2 2
MIRT658716 ELOVL4 ELOVL fatty acid elongase 4 2 2
MIRT661640 UGT2B28 UDP glucuronosyltransferase family 2 member B28 2 2
MIRT661712 MTO1 mitochondrial tRNA translation optimization 1 2 4
MIRT661833 ZNF793 zinc finger protein 793 2 2
MIRT663805 BET1L Bet1 golgi vesicular membrane trafficking protein like 2 2
MIRT663884 CXorf56 chromosome X open reading frame 56 2 2
MIRT664672 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 2
MIRT665814 TMEM168 transmembrane protein 168 2 2
MIRT668159 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT668430 FAM20B FAM20B, glycosaminoglycan xylosylkinase 2 2
MIRT672306 GP2 glycoprotein 2 2 2
MIRT673101 SYNPO2L synaptopodin 2 like 2 2
MIRT673437 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT673584 KDELC2 KDEL motif containing 2 2 2
MIRT673718 SLU7 SLU7 homolog, splicing factor 2 2
MIRT673777 MRPL17 mitochondrial ribosomal protein L17 2 2
MIRT674316 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT674820 FAM229B family with sequence similarity 229 member B 2 2
MIRT675179 BPTF bromodomain PHD finger transcription factor 2 2
MIRT675586 WWC1 WW and C2 domain containing 1 2 2
MIRT675812 MED28 mediator complex subunit 28 2 2
MIRT677632 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT683914 PSMB9 proteasome subunit beta 9 2 2
MIRT687135 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT691973 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 2 2
MIRT693078 AS3MT arsenite methyltransferase 2 2
MIRT694084 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT696292 IER3IP1 immediate early response 3 interacting protein 1 2 2
MIRT696541 C3 complement C3 2 2
MIRT701955 MITF melanogenesis associated transcription factor 2 2
MIRT703276 GNG12 G protein subunit gamma 12 2 2
MIRT706852 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT706993 XPO5 exportin 5 2 2
MIRT710716 KRTAP6-1 keratin associated protein 6-1 2 2
MIRT711305 ACOX1 acyl-CoA oxidase 1 2 2
MIRT711514 ESCO1 establishment of sister chromatid cohesion N-acetyltransferase 1 2 2
MIRT711648 LIPG lipase G, endothelial type 2 2
MIRT711772 CCDC59 coiled-coil domain containing 59 2 2
MIRT714280 COQ7 coenzyme Q7, hydroxylase 2 2
MIRT715048 PRPF38A pre-mRNA processing factor 38A 2 2
MIRT716934 INCENP inner centromere protein 2 2
MIRT717220 OTUD3 OTU deubiquitinase 3 2 2
MIRT717865 BICD2 BICD cargo adaptor 2 2 2
MIRT718836 SNX20 sorting nexin 20 2 2
MIRT720243 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT721969 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 2
MIRT724000 LMTK2 lemur tyrosine kinase 2 2 2
MIRT725193 SDAD1 SDA1 domain containing 1 2 2
MIRT731669 CBL Cbl proto-oncogene 3 1
MIRT732776 AQP4 aquaporin 4 3 0
MIRT733158 ITGA5 integrin subunit alpha 5 1 0
MIRT735623 TLR4 toll like receptor 4 4 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-216a Curcumin NULL 969516 Quantitative real-time PCR Y79 RB cells. 22510010 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-216a Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-216a-5p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (SKOV3, 2008, OVCAR10, OVCAR3, HeLa, MCF7, MDA-MB-468)
hsa-miR-216a-5p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-216a-5p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-216a-5p Doxorubicin 31703 NSC123127 approved sensitive High Small Cell Lung Cancer cell line (NCI-H69)
hsa-miR-216a-5p Sorafenib 216239 NSC747971 approved resistant Low Hepatocellular Carcinoma tissue and cell line (HepG2, Hep3B, Huh-7, PLC/PRF/5, HCCLM3, Bel-7404, HLE, SK-HEP-1, SNU-449)
hsa-miR-216a-5p Fluorouracil 3385 NSC19893 approved resistant High Colorectal Cancer tissue
hsa-miR-216a-5p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer tissue
hsa-miR-216a-5p Sorafenib 216239 NSC747971 approved resistant High Hepatocellular Carcinoma cell line (Huh-7)
hsa-miR-216a-5p Doxorubicin 31703 NSC123127 approved resistant Low Small Cell Lung Cancer cell line (H69, H446)
hsa-miR-216a-5p Cisplatin 5460033 NSC119875 approved resistant Low Ovarian Cancer cell line (SKOV3, OVCA433)
hsa-miR-216a-5p Oxaliplatin 6857599 NSC266046 approved resistant Low Gastric Cancer cell line (MGC, SGC)
hsa-miR-216a-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-216a-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-216a-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-216a-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM16)
hsa-miR-216a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM11)
hsa-miR-216a-5p Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM17)
hsa-miR-216a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-216a-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM43)
hsa-miR-216a-5p Exemestane 60198 NSC713563 approved sensitive cell line (MCF-7)
hsa-miR-216a-5p Testosterone+Tamoxifen sensitive cell line (MCF-7)
hsa-miR-216a-5p Cisplatin 5460033 NSC119875 approved resistant cell line (RPMI2650)
hsa-miR-216a-5p Tamoxifen 2733525 NSC180973 approved sensitive cell line (TamR8)
hsa-miR-216a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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