pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF583   
Synonyms -
Description zinc finger protein 583
Transcript NM_001159860   
Other Transcripts NM_001159861 , NM_152478   
Expression
Putative miRNA Targets on ZNF583
3'UTR of ZNF583
(miRNA target sites are highlighted)
>ZNF583|NM_001159860|3'UTR
   1 ATATTTCTGGAATCCACCTCTTGAATCCATTTCCATCCCATCATCCTTGTCCAATGCACATTAATATATTTGACATGGGA
  81 TACTCGAGTAGCTTTCTAATTGGTCTCCTTGTACTCACCATTGTCTCTGTCAGATGTCCACATTGCAACCAAATTTGTAT
 161 TTTTAAAAATATGTTTAATCTCATTTCTCCCTCATTAAAATCCCTCAGTGGCATCCCATGGTTTTTAAGTTAAAGCACAC
 241 ATTCTTCAAAATAGCCTAAAAACCTAGCCTCTAACACCTTGTTCCAGGTTACCTTCCAAAGTTTCTATCTTGTGTCACTA
 321 TCCATCTCATTCTCTGAATACTTATCCAGGATTAAGATACATATTCCAGGATCAAAAAGACCTGGGTTCCAATCTTTGCA
 401 CTTCCATTTCCTGCCCTCTAATTTGGGGGCAGCAGTTTGTGCTTTGTAAGCTTCAGTCTTATTTATAGTGTGGGAATAAT
 481 AATGGTTCTACCTCAGAAGTTAATAGAAGAATGAAATAATGCATGTAAATTGCTCAGCAGCGTGCCTAGCATAAAGTAAT
 561 TACTCAAACCATAATGTAAAGTAAAAAGATAACCATACTATACATAGAAAGCCAATCATCTCAGCCATGATTATCTCAGA
 641 AATAAAAAGAGATGCAGCAGCTC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gguagaagGAAGUCGGAg 5'
                  ||||||:|| 
Target 5' tttgtaagCTTCAGTCTt 3'
443 - 460 134.00 -12.60
2
miRNA  3' ggUAGAAGGAAGUCGGag 5'
            ||| ||  ||||||  
Target 5' caATCATC--TCAGCCat 3'
613 - 628 132.00 -10.60
3
miRNA  3' ggUAGAAGGAAGUCGGAg 5'
            |||  || ||| ||| 
Target 5' ccATC--CCATCATCCTt 3'
33 - 48 120.00 -12.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN15627133 3 COSMIC
COSN31586070 87 COSMIC
COSN30540993 429 COSMIC
COSN31579556 543 COSMIC
COSN8343970 684 COSMIC
COSN27214664 697 COSMIC
COSN9852653 773 COSMIC
COSN25136777 780 COSMIC
COSN22901106 860 COSMIC
COSN28492116 861 COSMIC
COSN29498329 865 COSMIC
COSN25891349 949 COSMIC
COSN6417903 1046 COSMIC
COSN8262466 1074 COSMIC
COSN2521349 1470 COSMIC
COSN15135053 1632 COSMIC
COSN26432713 1668 COSMIC
COSN8553119 2155 COSMIC
COSN16310342 2334 COSMIC
COSN9852654 2405 COSMIC
COSN17649570 2751 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1333061984 8 dbSNP
rs1258032836 10 dbSNP
rs548800020 16 dbSNP
rs1446222485 17 dbSNP
rs748862595 21 dbSNP
rs768399139 22 dbSNP
rs774186444 23 dbSNP
rs113336547 28 dbSNP
rs944053675 29 dbSNP
rs1283204754 30 dbSNP
rs772271356 32 dbSNP
rs373398365 38 dbSNP
rs375327654 43 dbSNP
rs1041439101 56 dbSNP
rs1333571710 57 dbSNP
rs1444707391 60 dbSNP
rs921392335 61 dbSNP
rs1401541286 68 dbSNP
rs975772951 84 dbSNP
rs373210148 86 dbSNP
rs142667262 87 dbSNP
rs551361202 92 dbSNP
rs1176369105 98 dbSNP
rs1009321779 101 dbSNP
rs571284785 104 dbSNP
rs950592736 109 dbSNP
rs1201606465 115 dbSNP
rs1347769408 124 dbSNP
rs771431147 127 dbSNP
rs1412710799 129 dbSNP
rs984720642 134 dbSNP
rs1233026838 140 dbSNP
rs1354827817 144 dbSNP
rs1341056119 149 dbSNP
rs1042311236 151 dbSNP
rs1311803616 181 dbSNP
rs774280359 191 dbSNP
rs1003245101 192 dbSNP
rs1277307435 203 dbSNP
rs909012884 215 dbSNP
rs1033752856 217 dbSNP
rs1240360208 222 dbSNP
rs377723279 230 dbSNP
rs1334937046 235 dbSNP
rs1397804599 238 dbSNP
rs1279199937 257 dbSNP
rs959136436 265 dbSNP
rs775236718 270 dbSNP
rs759461302 274 dbSNP
rs1213483726 276 dbSNP
rs1420126960 281 dbSNP
rs1381922748 285 dbSNP
rs1257462997 291 dbSNP
rs994608373 291 dbSNP
rs1027378794 299 dbSNP
rs1055213134 306 dbSNP
rs918028802 307 dbSNP
rs879431268 309 dbSNP
rs949368515 311 dbSNP
rs952863019 319 dbSNP
rs767043684 323 dbSNP
rs983314565 325 dbSNP
rs1001037726 329 dbSNP
rs908831116 333 dbSNP
rs966003431 346 dbSNP
rs370434142 347 dbSNP
rs1342221752 357 dbSNP
rs1393520639 366 dbSNP
rs976806739 387 dbSNP
rs1007502077 392 dbSNP
rs1175356858 398 dbSNP
rs1402787833 412 dbSNP
rs537717450 419 dbSNP
rs1390426041 420 dbSNP
rs1017338883 421 dbSNP
rs1474030845 423 dbSNP
rs966213512 429 dbSNP
rs1390799690 432 dbSNP
rs997287529 434 dbSNP
rs867247734 441 dbSNP
rs1336974890 446 dbSNP
rs1477205552 450 dbSNP
rs1446889297 451 dbSNP
rs111885214 463 dbSNP
rs1025958889 466 dbSNP
rs921246203 475 dbSNP
rs1288825328 476 dbSNP
rs1207857586 478 dbSNP
rs1368404691 484 dbSNP
rs1273736691 486 dbSNP
rs1218000885 503 dbSNP
rs1236948768 516 dbSNP
rs551290610 520 dbSNP
rs1280219886 524 dbSNP
rs932629400 529 dbSNP
rs1339275035 538 dbSNP
rs984668336 539 dbSNP
rs752257256 542 dbSNP
rs146743457 543 dbSNP
rs1275754938 547 dbSNP
rs1458226740 550 dbSNP
rs1464562323 552 dbSNP
rs746572396 552 dbSNP
rs1193156161 557 dbSNP
rs1195246277 557 dbSNP
rs959228501 564 dbSNP
rs536899123 570 dbSNP
rs1196389646 575 dbSNP
rs768506790 586 dbSNP
rs1253446698 590 dbSNP
rs8106099 595 dbSNP
rs949441793 600 dbSNP
rs1260020697 606 dbSNP
rs573248522 612 dbSNP
rs1344495079 618 dbSNP
rs1042458547 626 dbSNP
rs538766503 629 dbSNP
rs1438943305 630 dbSNP
rs923904262 644 dbSNP
rs1331140449 648 dbSNP
rs1445153318 649 dbSNP
rs1461323102 652 dbSNP
rs936712308 658 dbSNP
rs1398563252 673 dbSNP
rs546477124 677 dbSNP
rs558503635 677 dbSNP
rs1170424945 681 dbSNP
rs890059909 683 dbSNP
rs1041588807 684 dbSNP
rs35790545 684 dbSNP
rs76663525 684 dbSNP
rs1177796684 686 dbSNP
rs1456339998 687 dbSNP
rs1324711269 690 dbSNP
rs1391792805 697 dbSNP
rs1442707851 698 dbSNP
rs1276643820 716 dbSNP
rs901356385 721 dbSNP
rs997234255 724 dbSNP
rs763701109 727 dbSNP
rs1225698979 728 dbSNP
rs1238440499 729 dbSNP
rs575119818 740 dbSNP
rs1026073061 756 dbSNP
rs1319295752 759 dbSNP
rs886105714 766 dbSNP
rs566662371 767 dbSNP
rs1331664003 768 dbSNP
rs1415772727 776 dbSNP
rs181085182 777 dbSNP
rs1395320243 779 dbSNP
rs557268198 782 dbSNP
rs959528174 787 dbSNP
rs184240660 789 dbSNP
rs1469896690 798 dbSNP
rs1210620073 815 dbSNP
rs780347032 819 dbSNP
rs1235763232 821 dbSNP
rs1212359088 822 dbSNP
rs573853837 823 dbSNP
rs939249106 824 dbSNP
rs1055029445 833 dbSNP
rs1285577285 834 dbSNP
rs1269903330 851 dbSNP
rs1308212305 851 dbSNP
rs990765016 851 dbSNP
rs1228212422 853 dbSNP
rs1261301127 856 dbSNP
rs1427643235 860 dbSNP
rs7252607 861 dbSNP
rs970537288 869 dbSNP
rs994469275 869 dbSNP
rs1375594784 871 dbSNP
rs1297183775 872 dbSNP
rs573679219 877 dbSNP
rs924060062 884 dbSNP
rs1478128951 885 dbSNP
rs1159598211 889 dbSNP
rs1404642462 891 dbSNP
rs1163551980 894 dbSNP
rs1183599626 896 dbSNP
rs936659896 899 dbSNP
rs1027407956 907 dbSNP
rs879115539 911 dbSNP
rs911246321 912 dbSNP
rs886184503 923 dbSNP
rs1004416670 928 dbSNP
rs1016164152 929 dbSNP
rs76579194 973 dbSNP
rs1041309845 978 dbSNP
rs901304027 979 dbSNP
rs1293680956 981 dbSNP
rs867157959 982 dbSNP
rs77626859 984 dbSNP
rs1320373929 988 dbSNP
rs755485814 993 dbSNP
rs189973355 994 dbSNP
rs79711564 997 dbSNP
rs77019338 999 dbSNP
rs977426476 1000 dbSNP
rs1047505648 1004 dbSNP
rs79632985 1004 dbSNP
rs76891383 1006 dbSNP
rs886218720 1007 dbSNP
rs77024677 1008 dbSNP
rs528165513 1009 dbSNP
rs1220751759 1015 dbSNP
rs75627716 1016 dbSNP
rs78189260 1017 dbSNP
rs545151202 1027 dbSNP
rs564858590 1034 dbSNP
rs1245628474 1043 dbSNP
rs1260350709 1044 dbSNP
rs138896050 1047 dbSNP
rs1203124641 1048 dbSNP
rs79277602 1051 dbSNP
rs878929180 1055 dbSNP
rs1016314357 1057 dbSNP
rs954049061 1058 dbSNP
rs181142689 1064 dbSNP
rs1168651493 1069 dbSNP
rs1488505790 1072 dbSNP
rs989439634 1073 dbSNP
rs567901917 1074 dbSNP
rs915361184 1077 dbSNP
rs796476620 1078 dbSNP
rs1248865989 1079 dbSNP
rs748198063 1085 dbSNP
rs4801319 1086 dbSNP
rs547139845 1087 dbSNP
rs927808269 1092 dbSNP
rs778083989 1095 dbSNP
rs1308822345 1096 dbSNP
rs1295834149 1102 dbSNP
rs939170931 1107 dbSNP
rs1031025057 1108 dbSNP
rs958089551 1114 dbSNP
rs1441486028 1116 dbSNP
rs749527535 1120 dbSNP
rs566747636 1122 dbSNP
rs562118149 1123 dbSNP
rs558663265 1132 dbSNP
rs1160112857 1133 dbSNP
rs911182022 1140 dbSNP
rs930333713 1152 dbSNP
rs763126706 1159 dbSNP
rs1414557219 1178 dbSNP
rs1194673710 1182 dbSNP
rs1457663749 1184 dbSNP
rs770757221 1186 dbSNP
rs886216968 1195 dbSNP
rs1005021020 1196 dbSNP
rs1396674011 1201 dbSNP
rs544230499 1202 dbSNP
rs1481316908 1204 dbSNP
rs1251427926 1207 dbSNP
rs1306436597 1209 dbSNP
rs977406980 1212 dbSNP
rs922883997 1213 dbSNP
rs1234756093 1215 dbSNP
rs1018673042 1218 dbSNP
rs1329207728 1219 dbSNP
rs1393115236 1222 dbSNP
rs1397260210 1222 dbSNP
rs901350368 1237 dbSNP
rs998330158 1248 dbSNP
rs930115893 1251 dbSNP
rs1439461520 1255 dbSNP
rs1378909795 1266 dbSNP
rs1184565858 1269 dbSNP
rs1420239039 1272 dbSNP
rs1047285115 1273 dbSNP
rs185939780 1275 dbSNP
rs34451034 1282 dbSNP
rs771948518 1301 dbSNP
rs894800702 1311 dbSNP
rs538190421 1313 dbSNP
rs1352683722 1317 dbSNP
rs1209902070 1320 dbSNP
rs989468808 1327 dbSNP
rs1022235659 1336 dbSNP
rs115310330 1342 dbSNP
rs1336298781 1344 dbSNP
rs1312018701 1348 dbSNP
rs774433567 1374 dbSNP
rs1357518055 1377 dbSNP
rs573844021 1378 dbSNP
rs1313691476 1388 dbSNP
rs542578662 1394 dbSNP
rs1419376289 1397 dbSNP
rs1181916828 1401 dbSNP
rs143720250 1402 dbSNP
rs879019628 1403 dbSNP
rs573106997 1416 dbSNP
rs1454710071 1421 dbSNP
rs1368407077 1426 dbSNP
rs1186134215 1429 dbSNP
rs1160015336 1433 dbSNP
rs1473931221 1434 dbSNP
rs928038009 1444 dbSNP
rs763611401 1447 dbSNP
rs1188182534 1458 dbSNP
rs1030765749 1468 dbSNP
rs1281817454 1472 dbSNP
rs1206684474 1474 dbSNP
rs1351225346 1477 dbSNP
rs1264783765 1478 dbSNP
rs1380543445 1485 dbSNP
rs1294021152 1487 dbSNP
rs1434475096 1495 dbSNP
rs1399581126 1498 dbSNP
rs1338730227 1508 dbSNP
rs1320618108 1510 dbSNP
rs957907089 1512 dbSNP
rs1390536915 1518 dbSNP
rs1161952480 1531 dbSNP
rs960823937 1534 dbSNP
rs1011370352 1536 dbSNP
rs990647731 1544 dbSNP
rs1165033293 1548 dbSNP
rs188744986 1560 dbSNP
rs1240005086 1561 dbSNP
rs930531560 1563 dbSNP
rs565020820 1571 dbSNP
rs907558022 1575 dbSNP
rs530627017 1576 dbSNP
rs1298125832 1578 dbSNP
rs537832141 1590 dbSNP
rs901590788 1595 dbSNP
rs1310183382 1604 dbSNP
rs1370600713 1610 dbSNP
rs1273827986 1611 dbSNP
rs560738131 1614 dbSNP
rs1049871507 1616 dbSNP
rs1272133028 1620 dbSNP
rs1277988680 1624 dbSNP
rs890060189 1629 dbSNP
rs1322022772 1630 dbSNP
rs1443684943 1631 dbSNP
rs530394388 1632 dbSNP
rs866623650 1633 dbSNP
rs1325911639 1634 dbSNP
rs1464642925 1639 dbSNP
rs755393034 1645 dbSNP
rs1180033919 1653 dbSNP
rs1475557830 1654 dbSNP
rs554582693 1658 dbSNP
rs766355495 1662 dbSNP
rs781750758 1678 dbSNP
rs1191529549 1679 dbSNP
rs916359691 1689 dbSNP
rs1253546453 1700 dbSNP
rs1197998835 1722 dbSNP
rs947691875 1734 dbSNP
rs1275252031 1738 dbSNP
rs1196562610 1745 dbSNP
rs999496085 1760 dbSNP
rs1035552376 1766 dbSNP
rs1344607407 1771 dbSNP
rs1301627493 1778 dbSNP
rs1192117057 1784 dbSNP
rs960813395 1784 dbSNP
rs1372263449 1791 dbSNP
rs1046021101 1805 dbSNP
rs1427639453 1806 dbSNP
rs1352223621 1808 dbSNP
rs1434146699 1809 dbSNP
rs1170277878 1818 dbSNP
rs753261367 1822 dbSNP
rs148078583 1824 dbSNP
rs1401060594 1825 dbSNP
rs1171439854 1828 dbSNP
rs999366366 1830 dbSNP
rs374575826 1834 dbSNP
rs1395512334 1859 dbSNP
rs1177897550 1871 dbSNP
rs1468562931 1882 dbSNP
rs574588906 1885 dbSNP
rs566710502 1886 dbSNP
rs78916720 1888 dbSNP
rs368373078 1889 dbSNP
rs1010774857 1892 dbSNP
rs1394000529 1893 dbSNP
rs1213358298 1896 dbSNP
rs1349013142 1899 dbSNP
rs552353800 1907 dbSNP
rs568967917 1909 dbSNP
rs1018763087 1911 dbSNP
rs778055434 1916 dbSNP
rs181902442 1919 dbSNP
rs1294755169 1922 dbSNP
rs1029634938 1927 dbSNP
rs923043934 1937 dbSNP
rs951363098 1942 dbSNP
rs983027965 1943 dbSNP
rs910169147 1955 dbSNP
rs931715402 1958 dbSNP
rs1398821247 1960 dbSNP
rs1410070318 1966 dbSNP
rs1177773547 1968 dbSNP
rs1316063600 1975 dbSNP
rs749520295 1976 dbSNP
rs1199948632 1984 dbSNP
rs1050112670 1986 dbSNP
rs1467655640 2000 dbSNP
rs771096017 2005 dbSNP
rs1010996675 2020 dbSNP
rs991694213 2027 dbSNP
rs1319176475 2037 dbSNP
rs1043960235 2040 dbSNP
rs1285560565 2044 dbSNP
rs1228303229 2055 dbSNP
rs142750445 2058 dbSNP
rs999965930 2061 dbSNP
rs1416189364 2079 dbSNP
rs1035013351 2083 dbSNP
rs961096901 2088 dbSNP
rs1288001406 2097 dbSNP
rs1012354881 2098 dbSNP
rs1346804804 2110 dbSNP
rs1186356106 2115 dbSNP
rs753085532 2115 dbSNP
rs1023695850 2116 dbSNP
rs1404728069 2117 dbSNP
rs1415709041 2123 dbSNP
rs1167213729 2124 dbSNP
rs951867031 2129 dbSNP
rs927596733 2130 dbSNP
rs1172045571 2144 dbSNP
rs778743662 2163 dbSNP
rs374625339 2164 dbSNP
rs1325713585 2167 dbSNP
rs536530451 2172 dbSNP
rs1467542687 2173 dbSNP
rs961975630 2183 dbSNP
rs976178619 2187 dbSNP
rs1052298248 2190 dbSNP
rs745597908 2204 dbSNP
rs1234598636 2206 dbSNP
rs893752773 2218 dbSNP
rs139408718 2226 dbSNP
rs1039516059 2227 dbSNP
rs1363774983 2232 dbSNP
rs1288113728 2237 dbSNP
rs560438172 2242 dbSNP
rs1440008006 2246 dbSNP
rs1220335911 2247 dbSNP
rs186425081 2252 dbSNP
rs771928400 2262 dbSNP
rs1462017837 2264 dbSNP
rs985852495 2277 dbSNP
rs1226128917 2278 dbSNP
rs1291557181 2285 dbSNP
rs533109221 2293 dbSNP
rs118066274 2295 dbSNP
rs1004244026 2301 dbSNP
rs1255437028 2309 dbSNP
rs1017583812 2318 dbSNP
rs1489495001 2319 dbSNP
rs962966543 2323 dbSNP
rs1201949035 2324 dbSNP
rs1043890558 2328 dbSNP
rs768153136 2333 dbSNP
rs1308910555 2344 dbSNP
rs1295948869 2345 dbSNP
rs558796405 2347 dbSNP
rs1257451082 2355 dbSNP
rs992162252 2362 dbSNP
rs776160660 2369 dbSNP
rs1441600299 2380 dbSNP
rs1165141123 2387 dbSNP
rs1414763451 2388 dbSNP
rs1400394879 2389 dbSNP
rs1463667810 2393 dbSNP
rs1355340347 2398 dbSNP
rs1173320573 2400 dbSNP
rs1452944097 2402 dbSNP
rs902791270 2403 dbSNP
rs1157223592 2404 dbSNP
rs935577689 2406 dbSNP
rs1057092983 2420 dbSNP
rs896501275 2438 dbSNP
rs1419034256 2442 dbSNP
rs1012219026 2445 dbSNP
rs575377728 2461 dbSNP
rs1251520460 2472 dbSNP
rs934987384 2477 dbSNP
rs1345432817 2478 dbSNP
rs1282242515 2482 dbSNP
rs987790356 2483 dbSNP
rs761506585 2493 dbSNP
rs764749315 2502 dbSNP
rs946626214 2507 dbSNP
rs191950108 2510 dbSNP
rs1354803095 2517 dbSNP
rs1006088355 2518 dbSNP
rs1312471784 2529 dbSNP
rs1433133180 2534 dbSNP
rs1377607632 2538 dbSNP
rs560918685 2541 dbSNP
rs899661678 2547 dbSNP
rs370745850 2549 dbSNP
rs574386654 2550 dbSNP
rs976038985 2553 dbSNP
rs1356468339 2554 dbSNP
rs1420330954 2560 dbSNP
rs1051168304 2563 dbSNP
rs374103729 2565 dbSNP
rs1222813686 2566 dbSNP
rs1283449821 2569 dbSNP
rs1356233133 2570 dbSNP
rs1292779380 2571 dbSNP
rs1424258831 2571 dbSNP
rs34825550 2571 dbSNP
rs386389324 2571 dbSNP
rs386389325 2571 dbSNP
rs574643025 2571 dbSNP
rs879108815 2571 dbSNP
rs1217880997 2572 dbSNP
rs1280238290 2573 dbSNP
rs1413108754 2585 dbSNP
rs1030631009 2586 dbSNP
rs900733317 2588 dbSNP
rs1004315918 2594 dbSNP
rs1381996594 2596 dbSNP
rs953053139 2606 dbSNP
rs1160770175 2612 dbSNP
rs1016905424 2613 dbSNP
rs750122096 2615 dbSNP
rs759753210 2628 dbSNP
rs1473981431 2629 dbSNP
rs985759534 2630 dbSNP
rs182992513 2631 dbSNP
rs768006626 2636 dbSNP
rs546697986 2640 dbSNP
rs1013131758 2647 dbSNP
rs1421270455 2653 dbSNP
rs1359078646 2660 dbSNP
rs1402201916 2662 dbSNP
rs116224257 2664 dbSNP
rs756750948 2674 dbSNP
rs935468852 2677 dbSNP
rs1272560041 2679 dbSNP
rs1056724334 2680 dbSNP
rs896700896 2684 dbSNP
rs981607614 2687 dbSNP
rs948074430 2688 dbSNP
rs566922694 2692 dbSNP
rs1306614548 2698 dbSNP
rs956433421 2702 dbSNP
rs796658728 2704 dbSNP
rs887886168 2710 dbSNP
rs914879441 2713 dbSNP
rs1459398135 2723 dbSNP
rs1396089247 2724 dbSNP
rs529353015 2727 dbSNP
rs1474895431 2733 dbSNP
rs1241290730 2736 dbSNP
rs1280131839 2741 dbSNP
rs1343337975 2742 dbSNP
rs777966471 2743 dbSNP
rs1211793442 2744 dbSNP
rs975347578 2746 dbSNP
rs1290722924 2747 dbSNP
rs1015394642 2750 dbSNP
rs1195398329 2751 dbSNP
rs897667783 2753 dbSNP
rs1337714611 2764 dbSNP
rs997720812 2773 dbSNP
rs1228606049 2776 dbSNP
rs185823328 2778 dbSNP
rs562762296 2795 dbSNP
rs1372488532 2808 dbSNP
rs1240253432 2812 dbSNP
rs757376778 2813 dbSNP
rs368592682 2826 dbSNP
rs1007206789 2829 dbSNP
rs139571100 2830 dbSNP
rs968330450 2832 dbSNP
rs977209588 2833 dbSNP
rs1191631387 2847 dbSNP
rs1455552847 2850 dbSNP
rs778959505 2852 dbSNP
rs1247308853 2858 dbSNP
rs1044641924 2862 dbSNP
rs1345066662 2862 dbSNP
rs1174195690 2863 dbSNP
rs907490881 2863 dbSNP
rs1275359939 2873 dbSNP
rs1003098635 2876 dbSNP
rs746119804 2879 dbSNP
rs1278674718 2883 dbSNP
rs1237079854 2885 dbSNP
rs1408860380 2896 dbSNP
rs956895758 2904 dbSNP
rs1368931478 2911 dbSNP
rs1274853077 2916 dbSNP
rs992733601 2920 dbSNP
rs955844991 2934 dbSNP
rs1401997270 2945 dbSNP
rs1374577810 2954 dbSNP
rs1171544469 2958 dbSNP
rs1436439681 2959 dbSNP
rs918206897 2967 dbSNP
rs948267310 2969 dbSNP
rs1157981593 2981 dbSNP
rs758179171 2984 dbSNP
rs909227312 2985 dbSNP
rs941993548 2990 dbSNP
rs1183111038 2991 dbSNP
rs1485480408 2997 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084040. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep1 HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 HITS-CLIP data was present in GSM1084045. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084040
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep1
Location of target site ENST00000333201.9 | 3UTR | UGUUCAAGUGAUUCUCCUGCCUCAGCCUCCUGAGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000333201.9 | 3UTR | UGUUCAAGUGAUUCUCCUGCCUCAGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084045
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep3
Location of target site ENST00000333201.9 | 3UTR | UGUUCAAGUGAUUCUCCUGCCUCAGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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