pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PLEKHA1   
Synonyms TAPP1
Description pleckstrin homology domain containing A1
Transcript NM_001001974   
Other Transcripts NM_021622   
Expression
Putative miRNA Targets on PLEKHA1
3'UTR of PLEKHA1
(miRNA target sites are highlighted)
>PLEKHA1|NM_001001974|3'UTR
   1 GGCAGAAGCGCACGGAGCCTGCCTGCCTCTGCCGTCCTCAGTTTCCTTTCATGAGGCTTCTAGCCAAAGATGATAAAGGG
  81 GGAAATGGTTTTTAGTGCGTATATTATACTGCCTCTTAGGTGTACTCTTTATAAGCTGGTAAACCAAGAATCTAGGGAGT
 161 GGCCAAACTAAATATAATTTCTTTAAAAAAGAAAGAAAAAGGAAAAATCCAAAATATCTCAGTATCATCTGTCTGAAGCA
 241 TTGTGTGTTCTCATTCGGGTGGTAACAATGTATGTGTAATATTTTTTTCTTAGTGATTTTGACAGTTTAAATGTTTAACA
 321 ACTTAAAGCATTAAAAATGCTTATTAATAACTTTGGTCATTTAAAAAATGCTACAATGACTTCCTATTAAAGGTTCAATA
 401 TTTACACATTCTTATTGGTTGATATTACCACATGAAATATTGCCAGACCAAGATACCTAAACTCATGATGTCTGTGGTGC
 481 TGTAAAATTTATACTAAAATGTGGACTATTTTGAAATTATAACCATTTTTGATGCCCTGAATCTTGAGGTGACTTATTTT
 561 GCATAGAGGATATGGATAGACCAACAGTAAGGGTTGTGGGTTATACCGGCATAGAGAAAAGAAGAAAACTAGAATTGAAA
 641 CAACTGTGTCTTAGACATTTGTTTGAAAAAGCTTCATCAGGCCTTGGAGCAGTCACTGCTTTATTCCGCAAAAATTATTT
 721 GGTAGGAAATTTTTGGGAGATCTGATTTTCTTATCCAAGTTTTGTAAATAGTTGTTATTTCTATATTTGGATTGGTGAAA
 801 GACCTCAAGTTTATATGTAAAGACATAACTGCCCTTAGTCATGAAATTGTTGTGACCTCTACTTTTTGTCACTAATAGCC
 881 TACATTCAAGTGCCTGTGTTTTTTCATCTTGTTTAGGAATGTTTTGAGATTAATGTGCTTAAAAGTCCTACGTGACTGAT
 961 TTTAAACATTGTGATAAAATTAATTTTCAGTAGAATAGTTGAATGTGTTAAGATAGGATTTTATGTTAGAGATACCAGAA
1041 TGCTGGTATTCTACTACTTGTGCAATATATATGTTTTAAAAAACAAATTTGAGAATACATTTAATCATAGGGATATAGAT
1121 ATAAGCACCTCTCTAAAGAATCTTTAGTTTCCGACGTTGAATTATAGACCAGTTTGAGTAAGTACTGCTTTTTTTTTTTG
1201 GAGACGGGCTCTCGCTCTGTTGCTCAGGCTGGAGTGCAGTGGCGTGATCTCAGCTCACTACAGCCTCCACCTCGTGGGTT
1281 CAAACAGTTGTGCTGCCTCAGCTTCCCGAGTAGCTAGGATTACAGGTGCATGCCACCACACCTGGCTAATTTTTGTATTT
1361 TAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTCGTCTCGAACTCCTGACTTCAGGTGATCCACCCATCTCAGCCTCC
1441 CAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCGGCCCATAAGTACCGTTTTTGAGGTTCAGTCTTAAACATTTGC
1521 TTTAAGAAAACAGTCTTGAATTTCACATGCTGCTATTTTTATATTTTGCCATTTTACAGTACTGTTTTGTTTTGAATTCA
1601 TGCATATCATTGAAAATTTCTCGTTTTCATTTTCTTAGATGACTTCTTGTCTGAGACAGAAAAATTTCCTACTACAGCAG
1681 TGCAGTCCAGAGGTTAAGATGTATTAGAATTATACAATATCAGTTTAAAAATCTGTATGCATAAAGAATGCACCACTCAA
1761 CTTTTTTATTCATAAGCTAATATTTTTTTAAAGTTACATTAAGATTTTTTCTCTTTTGCAGCTACATTTGAAAGTGATAG
1841 AATAAAGAGATTTTAATGAGTTATCACTTTTTCAGCTGATATATTCATTTTAATGGCTTTTTTGAAAGTTCCTTTTTCAT
1921 GAACACACCCGAGAAATCTTAAATAGACACTTTGCAATATTTAAGAACCTAATGCTGTTTAATTTTGGTACAGCTTCCAC
2001 ATTGCATGTTCACTTTAGTATTTGCAATTTGATATATTTCATGGTGGCAAAATATTAGCTCTGTTTTGGGACATTTTAAA
2081 ATAGAACTATCCTTGTTCGATAGCATAGGAAAATGTTCTGGTGATTGTCAGGGTCTCCTAATATTTATCTCAATTCTTTT
2161 ATAAGTCTATGGAAATTATTTAATTATTTTAAAACGTACACACTTTTCTTGTAAATATGTCACATCTGAGTTCAAAAAAA
2241 TTACTTTGAATACCTTAATATTTGCTGCATTTTTTTCCGTATATATAACATGTCTTCTTTCAGAATGGGAATATATGTGT
2321 GCCTCCCAACATTTACTGTTAAAGTGTGTTATCTTTATATGTCAAACTGGTTGAACACTGTAATGAGAATAAACTGCACA
2401 GAGTTTATTCTGACTTAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugacGUCGGAACUGGAGGGUc 5'
              || :||  :||||||| 
Target 5' caccCA-TCTCAGCCTCCCAa 3'
1424 - 1443 148.00 -14.30
2
miRNA  3' ugacgucggaAC-UGGAGGGUc 5'
                    || :||||||| 
Target 5' ggaatatatgTGTGCCTCCCAa 3'
2308 - 2329 143.00 -12.80
3
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            ||| ||||  :|:||||: 
Target 5' tgTGCTGCCTCAGCTTCCCGa 3'
1289 - 1309 135.00 -20.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30154183 16 COSMIC
COSN30497892 33 COSMIC
COSN13257903 35 COSMIC
COSN25810120 167 COSMIC
COSN31589696 472 COSMIC
COSN16130360 526 COSMIC
COSN30171071 888 COSMIC
COSN31959534 907 COSMIC
COSN15748230 915 COSMIC
COSN31516890 1053 COSMIC
COSN30391744 1092 COSMIC
COSN30390001 1093 COSMIC
COSN6944444 1153 COSMIC
COSN15365253 1177 COSMIC
COSN24718469 1201 COSMIC
COSN5793900 1249 COSMIC
COSN15662305 1456 COSMIC
COSN31959535 1463 COSMIC
COSN26547907 1473 COSMIC
COSN26647621 1474 COSMIC
COSN26567549 1478 COSMIC
COSN31518687 1479 COSMIC
COSN31583941 1521 COSMIC
COSN31548386 1527 COSMIC
COSN31571813 1616 COSMIC
COSN23469519 1763 COSMIC
COSN31482978 1804 COSMIC
COSN31595862 1886 COSMIC
COSN22119865 2168 COSMIC
COSN22119866 2302 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs948370120 4 dbSNP
rs1329912404 5 dbSNP
rs767145828 8 dbSNP
rs749948712 10 dbSNP
rs755554481 11 dbSNP
rs368778516 14 dbSNP
rs754392607 15 dbSNP
rs755480994 19 dbSNP
rs779176876 20 dbSNP
rs372713152 23 dbSNP
rs1222050229 27 dbSNP
rs1207675180 28 dbSNP
rs1286220444 34 dbSNP
rs1447434716 35 dbSNP
rs892625586 39 dbSNP
rs748497042 40 dbSNP
rs1266348132 41 dbSNP
rs112601954 52 dbSNP
rs990710107 58 dbSNP
rs1387729700 61 dbSNP
rs1173561436 71 dbSNP
rs867664446 73 dbSNP
rs1455638713 76 dbSNP
rs545044725 79 dbSNP
rs879688683 81 dbSNP
rs1246781758 83 dbSNP
rs1022787291 94 dbSNP
rs899856174 99 dbSNP
rs1242593631 100 dbSNP
rs768211177 101 dbSNP
rs1208035862 102 dbSNP
rs980316737 110 dbSNP
rs1228592833 115 dbSNP
rs746225224 121 dbSNP
rs1029548027 123 dbSNP
rs1299781682 125 dbSNP
rs1229039096 148 dbSNP
rs928623484 151 dbSNP
rs564813001 155 dbSNP
rs1300573104 167 dbSNP
rs769516489 170 dbSNP
rs1037152135 180 dbSNP
rs962856028 188 dbSNP
rs1269163555 194 dbSNP
rs779843294 198 dbSNP
rs572045571 202 dbSNP
rs1203951089 203 dbSNP
rs1292082804 209 dbSNP
rs929181037 213 dbSNP
rs1220959095 216 dbSNP
rs1049387808 219 dbSNP
rs1473700084 225 dbSNP
rs887591638 228 dbSNP
rs1276530087 239 dbSNP
rs1205525024 245 dbSNP
rs1358682268 246 dbSNP
rs1007895905 248 dbSNP
rs939622720 257 dbSNP
rs1052679404 258 dbSNP
rs1411034061 260 dbSNP
rs1468518149 264 dbSNP
rs1164974304 265 dbSNP
rs892663000 280 dbSNP
rs1038885383 283 dbSNP
rs1371959457 293 dbSNP
rs34776323 302 dbSNP
rs1310240776 306 dbSNP
rs1391400620 313 dbSNP
rs946855712 317 dbSNP
rs1043837020 318 dbSNP
rs1163267000 322 dbSNP
rs901555311 323 dbSNP
rs1425676506 334 dbSNP
rs1181480194 345 dbSNP
rs7090725 345 dbSNP
rs1371951273 347 dbSNP
rs1410121373 352 dbSNP
rs996810895 352 dbSNP
rs1263111376 353 dbSNP
rs1289359090 354 dbSNP
rs796163712 355 dbSNP
rs561111002 356 dbSNP
rs1237377711 360 dbSNP
rs1031411818 373 dbSNP
rs1223672467 375 dbSNP
rs115416675 377 dbSNP
rs1282955870 380 dbSNP
rs373301606 382 dbSNP
rs1351978091 384 dbSNP
rs1288529635 392 dbSNP
rs1227750368 413 dbSNP
rs41302729 414 dbSNP
rs962590987 416 dbSNP
rs1292359213 426 dbSNP
rs1459885146 429 dbSNP
rs1206201702 433 dbSNP
rs369176236 437 dbSNP
rs974282996 444 dbSNP
rs1158562799 445 dbSNP
rs1435823333 457 dbSNP
rs1022718884 469 dbSNP
rs1189387880 478 dbSNP
rs1368924091 482 dbSNP
rs1183131634 485 dbSNP
rs1432454110 492 dbSNP
rs1264989275 511 dbSNP
rs1192655880 520 dbSNP
rs970213751 526 dbSNP
rs980390187 535 dbSNP
rs928318162 550 dbSNP
rs1391538851 552 dbSNP
rs928864132 562 dbSNP
rs1429970458 564 dbSNP
rs773752287 567 dbSNP
rs762610396 572 dbSNP
rs1389974521 578 dbSNP
rs1336566773 585 dbSNP
rs1232071497 586 dbSNP
rs1341593001 591 dbSNP
rs1312035842 593 dbSNP
rs1244773309 608 dbSNP
rs988433529 609 dbSNP
rs1312986210 612 dbSNP
rs1388850290 619 dbSNP
rs972712671 625 dbSNP
rs918573302 630 dbSNP
rs1344462061 633 dbSNP
rs1368944864 641 dbSNP
rs761745914 645 dbSNP
rs532142899 648 dbSNP
rs1320448728 653 dbSNP
rs17103541 668 dbSNP
rs1390925332 672 dbSNP
rs943200783 673 dbSNP
rs1038959501 677 dbSNP
rs773012415 679 dbSNP
rs901754930 682 dbSNP
rs1465745703 683 dbSNP
rs997162715 684 dbSNP
rs946919300 696 dbSNP
rs1274127636 707 dbSNP
rs1433500087 709 dbSNP
rs565694001 711 dbSNP
rs534467133 715 dbSNP
rs547775683 716 dbSNP
rs760441327 722 dbSNP
rs891431078 725 dbSNP
rs1011744694 729 dbSNP
rs567805851 731 dbSNP
rs190935301 733 dbSNP
rs75277276 735 dbSNP
rs1001690901 740 dbSNP
rs1199329915 743 dbSNP
rs1035970248 744 dbSNP
rs148317227 745 dbSNP
rs972952536 756 dbSNP
rs1349010035 757 dbSNP
rs918593037 761 dbSNP
rs1167433858 762 dbSNP
rs1370921294 769 dbSNP
rs1226825601 771 dbSNP
rs531691631 774 dbSNP
rs370642818 784 dbSNP
rs984649149 791 dbSNP
rs766202306 793 dbSNP
rs1174664300 794 dbSNP
rs1036962981 798 dbSNP
rs1466391884 802 dbSNP
rs41308685 804 dbSNP
rs1166704988 807 dbSNP
rs1452511105 807 dbSNP
rs1335272620 814 dbSNP
rs763218456 816 dbSNP
rs1435829844 818 dbSNP
rs1185071397 819 dbSNP
rs1294948255 820 dbSNP
rs1038823823 831 dbSNP
rs1200676357 844 dbSNP
rs923083890 849 dbSNP
rs933252034 851 dbSNP
rs1344972293 857 dbSNP
rs1023256808 862 dbSNP
rs1053002890 863 dbSNP
rs891495481 866 dbSNP
rs1338741455 874 dbSNP
rs1315185428 875 dbSNP
rs1415613775 880 dbSNP
rs1235767115 885 dbSNP
rs1370122727 890 dbSNP
rs1305956875 891 dbSNP
rs1264111518 892 dbSNP
rs1371143445 916 dbSNP
rs1428952050 935 dbSNP
rs1162554057 937 dbSNP
rs373378845 952 dbSNP
rs1455992926 955 dbSNP
rs947065064 971 dbSNP
rs969871805 974 dbSNP
rs1187573598 975 dbSNP
rs1472064369 979 dbSNP
rs1002652806 1004 dbSNP
rs1344081195 1004 dbSNP
rs1484227176 1013 dbSNP
rs1035419935 1019 dbSNP
rs769590519 1032 dbSNP
rs1354405049 1036 dbSNP
rs1267317198 1051 dbSNP
rs905594872 1062 dbSNP
rs1233902239 1063 dbSNP
rs1269881388 1065 dbSNP
rs1286660282 1065 dbSNP
rs955708078 1070 dbSNP
rs1465297599 1071 dbSNP
rs145790903 1078 dbSNP
rs374067699 1078 dbSNP
rs988855341 1084 dbSNP
rs1322881124 1090 dbSNP
rs1403552490 1091 dbSNP
rs914167366 1107 dbSNP
rs767529118 1111 dbSNP
rs1163370882 1113 dbSNP
rs1001264292 1119 dbSNP
rs1187389506 1123 dbSNP
rs1259131449 1144 dbSNP
rs1409369434 1145 dbSNP
rs1160880634 1147 dbSNP
rs968666304 1153 dbSNP
rs1199181590 1154 dbSNP
rs550334261 1157 dbSNP
rs1198527085 1159 dbSNP
rs1376748547 1159 dbSNP
rs1469569110 1161 dbSNP
rs774812463 1161 dbSNP
rs1450399188 1165 dbSNP
rs895955327 1172 dbSNP
rs994421806 1173 dbSNP
rs1025890759 1175 dbSNP
rs952854064 1179 dbSNP
rs759980290 1184 dbSNP
rs1328538599 1188 dbSNP
rs1491272959 1188 dbSNP
rs1433985172 1189 dbSNP
rs36012040 1189 dbSNP
rs397826975 1189 dbSNP
rs80271676 1190 dbSNP
rs1332786961 1193 dbSNP
rs979706233 1199 dbSNP
rs1174743462 1200 dbSNP
rs77954371 1200 dbSNP
rs201891435 1201 dbSNP
rs76918165 1202 dbSNP
rs764175129 1206 dbSNP
rs140517789 1207 dbSNP
rs1400944004 1209 dbSNP
rs1423946833 1214 dbSNP
rs1172391805 1215 dbSNP
rs1379922331 1218 dbSNP
rs1477215832 1218 dbSNP
rs1194801239 1219 dbSNP
rs1382940439 1225 dbSNP
rs1246281994 1235 dbSNP
rs1388707606 1237 dbSNP
rs751593770 1244 dbSNP
rs757740872 1245 dbSNP
rs912616734 1253 dbSNP
rs1221392877 1254 dbSNP
rs1346818469 1261 dbSNP
rs1304153725 1266 dbSNP
rs1018798827 1271 dbSNP
rs940031541 1274 dbSNP
rs964114881 1275 dbSNP
rs898490873 1283 dbSNP
rs538629753 1292 dbSNP
rs562836477 1294 dbSNP
rs1208083043 1298 dbSNP
rs1249945242 1300 dbSNP
rs143086805 1300 dbSNP
rs370654319 1300 dbSNP
rs1489152945 1302 dbSNP
rs923115071 1308 dbSNP
rs933153797 1309 dbSNP
rs989170469 1322 dbSNP
rs781570256 1327 dbSNP
rs572130624 1328 dbSNP
rs947065325 1330 dbSNP
rs1174594504 1331 dbSNP
rs1449402596 1335 dbSNP
rs1002683815 1338 dbSNP
rs1266156206 1340 dbSNP
rs1479253865 1343 dbSNP
rs1188385782 1358 dbSNP
rs1197707952 1362 dbSNP
rs1035452767 1373 dbSNP
rs1208272009 1379 dbSNP
rs1443982460 1381 dbSNP
rs1280794907 1397 dbSNP
rs541275251 1398 dbSNP
rs905501370 1400 dbSNP
rs937083533 1401 dbSNP
rs150400781 1402 dbSNP
rs1159063620 1403 dbSNP
rs1343976919 1408 dbSNP
rs1459462120 1410 dbSNP
rs896024229 1417 dbSNP
rs994337704 1421 dbSNP
rs1429463888 1423 dbSNP
rs1369302670 1428 dbSNP
rs1173121745 1441 dbSNP
rs1410666008 1444 dbSNP
rs111477601 1452 dbSNP
rs1026342984 1456 dbSNP
rs888685195 1457 dbSNP
rs1476311495 1458 dbSNP
rs11200626 1459 dbSNP
rs1181213884 1460 dbSNP
rs756512090 1461 dbSNP
rs574567357 1462 dbSNP
rs1018288065 1463 dbSNP
rs963978699 1469 dbSNP
rs867989160 1476 dbSNP
rs1029695169 1478 dbSNP
rs1320986360 1479 dbSNP
rs1028514840 1484 dbSNP
rs1229499011 1492 dbSNP
rs954231539 1493 dbSNP
rs1287304384 1495 dbSNP
rs1223035134 1500 dbSNP
rs780626872 1500 dbSNP
rs1349008189 1505 dbSNP
rs1304725141 1525 dbSNP
rs1443577647 1528 dbSNP
rs1349738474 1533 dbSNP
rs1323448235 1535 dbSNP
rs954573359 1537 dbSNP
rs1162806341 1540 dbSNP
rs988643587 1562 dbSNP
rs1290482344 1582 dbSNP
rs1158665942 1589 dbSNP
rs1471521273 1590 dbSNP
rs912647942 1594 dbSNP
rs913035304 1600 dbSNP
rs1488135628 1604 dbSNP
rs1206906542 1609 dbSNP
rs1254378338 1610 dbSNP
rs940137022 1614 dbSNP
rs1334891063 1615 dbSNP
rs1483563040 1620 dbSNP
rs947341208 1623 dbSNP
rs529636259 1624 dbSNP
rs11539386 1625 dbSNP
rs1226169317 1635 dbSNP
rs972832685 1636 dbSNP
rs919949866 1637 dbSNP
rs543298905 1638 dbSNP
rs1224645103 1669 dbSNP
rs1177008342 1670 dbSNP
rs1406342284 1674 dbSNP
rs1426146546 1686 dbSNP
rs931312160 1695 dbSNP
rs563375793 1697 dbSNP
rs532211377 1698 dbSNP
rs936985685 1702 dbSNP
rs1056934226 1703 dbSNP
rs1165556333 1704 dbSNP
rs1292268617 1713 dbSNP
rs1384739396 1714 dbSNP
rs1443247609 1716 dbSNP
rs1395294336 1717 dbSNP
rs138342268 1718 dbSNP
rs930157665 1723 dbSNP
rs905748671 1724 dbSNP
rs938504409 1734 dbSNP
rs559344454 1738 dbSNP
rs1195424398 1739 dbSNP
rs1468576505 1743 dbSNP
rs888584281 1745 dbSNP
rs1246892175 1752 dbSNP
rs1005809084 1757 dbSNP
rs1039892746 1759 dbSNP
rs1260896211 1761 dbSNP
rs1217015529 1765 dbSNP
rs1441141172 1766 dbSNP
rs1296243227 1767 dbSNP
rs1381244130 1776 dbSNP
rs899878972 1780 dbSNP
rs998130431 1781 dbSNP
rs1432931240 1782 dbSNP
rs1387481105 1783 dbSNP
rs748895189 1795 dbSNP
rs1465420932 1800 dbSNP
rs1010435833 1807 dbSNP
rs1313701535 1810 dbSNP
rs1175215952 1820 dbSNP
rs1454656700 1825 dbSNP
rs1356694338 1827 dbSNP
rs956831375 1838 dbSNP
rs1186147135 1846 dbSNP
rs1429749690 1847 dbSNP
rs1262041449 1850 dbSNP
rs1199521783 1851 dbSNP
rs1021364120 1860 dbSNP
rs142724785 1863 dbSNP
rs976305405 1868 dbSNP
rs1010039805 1875 dbSNP
rs1020127317 1880 dbSNP
rs377350911 1882 dbSNP
rs968919472 1883 dbSNP
rs1204264734 1892 dbSNP
rs536504236 1898 dbSNP
rs200299076 1905 dbSNP
rs1344095103 1909 dbSNP
rs1296638561 1913 dbSNP
rs1395680154 1914 dbSNP
rs1377160660 1925 dbSNP
rs181776797 1931 dbSNP
rs1184793730 1932 dbSNP
rs954254413 1938 dbSNP
rs927184679 1944 dbSNP
rs1463129118 1946 dbSNP
rs958385725 1947 dbSNP
rs1373138994 1949 dbSNP
rs987007633 1957 dbSNP
rs768431476 1969 dbSNP
rs1259121368 1975 dbSNP
rs1019773129 1983 dbSNP
rs1486187099 1984 dbSNP
rs1170583089 1989 dbSNP
rs992474190 1991 dbSNP
rs961554420 1995 dbSNP
rs1342008606 1998 dbSNP
rs1409672843 2000 dbSNP
rs548057923 2001 dbSNP
rs916894625 2003 dbSNP
rs571434328 2005 dbSNP
rs1466454082 2007 dbSNP
rs1295323893 2017 dbSNP
rs1415212104 2032 dbSNP
rs929753714 2033 dbSNP
rs1047217690 2035 dbSNP
rs1326838520 2038 dbSNP
rs1393072538 2045 dbSNP
rs910053959 2056 dbSNP
rs941518046 2062 dbSNP
rs1455915906 2063 dbSNP
rs1419628395 2071 dbSNP
rs778449237 2074 dbSNP
rs567909560 2078 dbSNP
rs536830854 2086 dbSNP
rs1475774083 2089 dbSNP
rs1039961844 2090 dbSNP
rs550139107 2092 dbSNP
rs900076950 2095 dbSNP
rs1297699534 2099 dbSNP
rs980066524 2100 dbSNP
rs998370652 2129 dbSNP
rs1467167627 2130 dbSNP
rs1275356390 2144 dbSNP
rs1360822113 2147 dbSNP
rs1328680856 2151 dbSNP
rs1277587205 2154 dbSNP
rs1240860531 2157 dbSNP
rs927199228 2159 dbSNP
rs1322778872 2160 dbSNP
rs569934437 2162 dbSNP
rs747635669 2164 dbSNP
rs1057064575 2174 dbSNP
rs892428732 2176 dbSNP
rs1271284722 2180 dbSNP
rs891654083 2187 dbSNP
rs1314272355 2192 dbSNP
rs538723005 2196 dbSNP
rs1043218018 2197 dbSNP
rs1009659410 2199 dbSNP
rs904245369 2200 dbSNP
rs1263005613 2203 dbSNP
rs1452724012 2214 dbSNP
rs143836607 2216 dbSNP
rs968613068 2231 dbSNP
rs1464632303 2237 dbSNP
rs1282395442 2258 dbSNP
rs538861544 2264 dbSNP
rs1351121960 2270 dbSNP
rs35693677 2270 dbSNP
rs1274241678 2271 dbSNP
rs1475193346 2277 dbSNP
rs534750326 2280 dbSNP
rs1303551455 2286 dbSNP
rs1433653911 2290 dbSNP
rs958628769 2291 dbSNP
rs1433504217 2293 dbSNP
rs770699048 2295 dbSNP
rs1402877858 2301 dbSNP
rs1386118026 2311 dbSNP
rs961862735 2314 dbSNP
rs1173343123 2316 dbSNP
rs1453122284 2327 dbSNP
rs1397374301 2328 dbSNP
rs776423967 2330 dbSNP
rs1194400827 2332 dbSNP
rs994317796 2338 dbSNP
rs1240645424 2342 dbSNP
rs1403728962 2347 dbSNP
rs1458811472 2355 dbSNP
rs1447736499 2357 dbSNP
rs1277656610 2358 dbSNP
rs992714299 2366 dbSNP
rs1349996224 2369 dbSNP
rs952788548 2371 dbSNP
rs916928677 2374 dbSNP
rs1320615724 2379 dbSNP
rs1359251732 2379 dbSNP
rs951079002 2390 dbSNP
rs1271632709 2400 dbSNP
rs1344133043 2400 dbSNP
rs982591746 2406 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugacgucGGAACUGGAGGGUc 5'
                 :||  :||||||| 
Target 5' ------aUCUCAGCCUCCCAa 3'
1 - 15
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000538022.1 | 3UTR | AUCUCAGCCUCCCAAAGUGCUGGGAUUACAGGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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