pre-miRNA Information
pre-miRNA hsa-mir-4708   
Genomic Coordinates chr14: 65335117 - 65335183
Description Homo sapiens miR-4708 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4708-5p
Sequence 9| AGAGAUGCCGCCUUGCUCCUU |29
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1017378847 9 dbSNP
rs750825813 10 dbSNP
rs1297395738 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PRR23A   
Synonyms -
Description proline rich 23A
Transcript NM_001134659   
Expression
Putative miRNA Targets on PRR23A
3'UTR of PRR23A
(miRNA target sites are highlighted)
>PRR23A|NM_001134659|3'UTR
   1 ACTGCTTCCCACAATCCCTTGCCACCGGCTGCGGGTTCTTGTGGATCCTCCAAGACTCACTGTGAGGACTTGCCACAGCC
  81 CGGAAATGCAGCATCTTCATTCATCGACAGCGGGCAGTTGGATTACTGTTGTTTGGGTGGGTTGGTTGGTTGGCTGGCTG
 161 GCTGGTTGGTTTTTTGGCAGAATTCCTTGGTAAGTGGCAGGCAAGGACATGAAAAAAGAAAAGCAGATTCTGGTAAGCAC
 241 CTTTACCAAGAAGAGTAGACCACACATAACCAGTCATGGATTTTCAGATCCCTTGCCTTTGCTGCAGGAGCTGTTACTTC
 321 TGCCTTTGTCACCTTCAGCCAACTGTATCCTCAGTTTCACCCCTACTCTTGCTTAAAGCTCCCTTCAGTTTTCTTTAAAA
 401 TTCCCCCCTTTTTTTTTATCACTTCCATACACCTATCCGTTCTCTCCAATCCAGATCATTGTCTTTCCTTCTTTTTGCAG
 481 TTAGGAATTTACCTATACGATTTCTCCCAACATCCTCTGAGGTGCTTCTGACCACTGATTTTATTTTCCACTTGCTCTCC
 561 TTAACTCCTTTTCCTGGACCTGGACAATCAAGATAAATGCATATTAGATTAGATAGTAAACAAACAACATTCAAATGTAA
 641 TGAATGCACTGGACCTTTTGGAAGTGTTTCTGCAAATAAGAATTTAAGGGCCGGGCGCGATGGCTCACGCCTGTAATCCC
 721 AGCACTTTGGGAGGCCGAGGCGTGTGGATCACCTGCAGTCAGGAGTTCGAGACTAGCCTGGCCAACATGGCGAAACTCCG
 801 TCTCTACTAAAAATACGAAAATTAGCCGGGCATGGTGGCGTGTGCCTGTAATCCCAGCTACTAGCAGGGATGAGGCAGGA
 881 GGAGTGCTTGAACCTGAGAGGCAGAGGTTGCAATGAGCCGAGATCGTGCCATTGCACTCCAGCCTGGGCAACAGAGTGAG
 961 ACTCCATCTCAAAAAAAAAAAAAAGAAAACGAAAAAACAATTTAAAAATTAGTGAAAGCAATATTTAATGAGGGAAAGTA
1041 GGAAGTTGTGACACTTTCATTCCAGCAGCATCTTGTACAATGACATATTCTATGTACTTTAACCAATGGGTATTCCTGAA
1121 TTTCAGGGCAGTGTGGGCTTCATCTTGATTTCCTCTCAGGGGTACTCACTCACCTTCACCGCATGGACATTTGGTCTAAT
1201 TTATTTTTGAGAGTTTTTTTCATGCTCTTGAGTCCATCACCCTGAATTGGCAGTCGTTATTTCTTAGTATTATTTCCTTA
1281 ATGTCTTTTTAACTATAAAGGAAAGGAAATATTACAGATAATGTTGTCATATCCTTTGATCCCCACTCTTCTCCCCCATT
1361 CCCAGGGGATTCACATCATGACACAAAGTTGATGGATATCATTCTAGTCAATATATGAAAGCTACATATACATATATATA
1441 TGTATAGATATAAATAAGCAATGTTTATGTTGTTTTCTGGACAATTAAATTTACATAACTACCTCA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uuCCUCGUUCCGCCGUAGAGa 5'
            |||  || || ||||||: 
Target 5' ccGGA--AATGCAGCATCTTc 3'
80 - 98 143.00 -9.00
2
miRNA  3' uucCUCGUUCCGCCGUAGAGa 5'
             |||::|| |  |||||| 
Target 5' acaGAGTGAGACTCCATCTCa 3'
951 - 971 134.00 -12.00
3
miRNA  3' uuccucguucCGCCGUAGAGa 5'
                    || ||||||: 
Target 5' tttcattccaGCAGCATCTTg 3'
1055 - 1075 131.00 -8.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1553877 484 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1287422250 2 dbSNP
rs180686917 4 dbSNP
rs765480383 6 dbSNP
rs529747107 7 dbSNP
rs1443914680 8 dbSNP
rs1337606431 9 dbSNP
rs1369460425 12 dbSNP
rs1235801656 17 dbSNP
rs776663477 26 dbSNP
rs1303509779 27 dbSNP
rs1179977284 28 dbSNP
rs764383708 33 dbSNP
rs1249410243 35 dbSNP
rs892056715 38 dbSNP
rs1056686996 39 dbSNP
rs540539328 42 dbSNP
rs1049732983 45 dbSNP
rs1264027648 48 dbSNP
rs1209140055 51 dbSNP
rs1251006190 52 dbSNP
rs905613185 60 dbSNP
rs1044155125 63 dbSNP
rs1469788847 66 dbSNP
rs372423981 73 dbSNP
rs759591785 74 dbSNP
rs931375404 78 dbSNP
rs941857148 80 dbSNP
rs1418706326 81 dbSNP
rs1157279651 82 dbSNP
rs561076491 88 dbSNP
rs1316566959 89 dbSNP
rs909018767 91 dbSNP
rs1325689531 92 dbSNP
rs1392835901 100 dbSNP
rs983319236 105 dbSNP
rs929173484 106 dbSNP
rs774322544 109 dbSNP
rs1328511886 111 dbSNP
rs1221688992 112 dbSNP
rs1308755581 115 dbSNP
rs976739927 115 dbSNP
rs1311039601 132 dbSNP
rs1243740038 135 dbSNP
rs1010187 137 dbSNP
rs1336784035 143 dbSNP
rs907783004 143 dbSNP
rs1253699200 148 dbSNP
rs1018352709 150 dbSNP
rs771050337 154 dbSNP
rs1175581477 156 dbSNP
rs985924348 157 dbSNP
rs1419901864 165 dbSNP
rs938588374 166 dbSNP
rs968843527 169 dbSNP
rs1395670139 176 dbSNP
rs1463474271 176 dbSNP
rs1022176283 185 dbSNP
rs1407191860 190 dbSNP
rs1353388401 197 dbSNP
rs979782759 200 dbSNP
rs968437601 201 dbSNP
rs914333620 202 dbSNP
rs771417279 203 dbSNP
rs1338758052 205 dbSNP
rs1010406856 209 dbSNP
rs76579185 217 dbSNP
rs1399686357 221 dbSNP
rs1167208570 222 dbSNP
rs1257293002 224 dbSNP
rs1462445749 226 dbSNP
rs1035937935 228 dbSNP
rs1185227327 233 dbSNP
rs1253163120 237 dbSNP
rs1481076782 250 dbSNP
rs558402191 253 dbSNP
rs1255814735 265 dbSNP
rs905561391 271 dbSNP
rs1476421076 275 dbSNP
rs1044087737 279 dbSNP
rs941748463 301 dbSNP
rs887544797 304 dbSNP
rs1408714846 315 dbSNP
rs1048016050 316 dbSNP
rs929187366 321 dbSNP
rs1243425179 322 dbSNP
rs1028264522 325 dbSNP
rs544916608 348 dbSNP
rs1456036779 349 dbSNP
rs1269384650 368 dbSNP
rs923168774 369 dbSNP
rs898579529 370 dbSNP
rs1297816814 374 dbSNP
rs976018462 375 dbSNP
rs1308199735 403 dbSNP
rs1342169231 404 dbSNP
rs575961615 405 dbSNP
rs911195947 408 dbSNP
rs1211955229 409 dbSNP
rs1491565604 409 dbSNP
rs556082514 409 dbSNP
rs1491143045 410 dbSNP
rs1244582388 411 dbSNP
rs886237364 413 dbSNP
rs1056979832 417 dbSNP
rs564701976 418 dbSNP
rs938555795 418 dbSNP
rs1383763695 420 dbSNP
rs1317376376 421 dbSNP
rs1444871607 422 dbSNP
rs1343287697 425 dbSNP
rs115469158 426 dbSNP
rs1270752504 427 dbSNP
rs969169136 439 dbSNP
rs189507276 450 dbSNP
rs143202286 451 dbSNP
rs1233605047 454 dbSNP
rs760527597 470 dbSNP
rs1553877 484 dbSNP
rs1035887365 485 dbSNP
rs1398619035 496 dbSNP
rs1161216415 498 dbSNP
rs914323295 504 dbSNP
rs576194745 506 dbSNP
rs1396421470 508 dbSNP
rs534159321 512 dbSNP
rs866649476 514 dbSNP
rs1405497869 517 dbSNP
rs1385664823 520 dbSNP
rs1318765807 524 dbSNP
rs1165029572 529 dbSNP
rs749345608 538 dbSNP
rs1438637279 539 dbSNP
rs1231813140 555 dbSNP
rs1373371903 557 dbSNP
rs1181980856 565 dbSNP
rs770138848 566 dbSNP
rs1023021238 573 dbSNP
rs775669443 580 dbSNP
rs1440040115 583 dbSNP
rs1265932466 592 dbSNP
rs887512962 598 dbSNP
rs1269179122 607 dbSNP
rs571686197 610 dbSNP
rs186407636 613 dbSNP
rs993309821 615 dbSNP
rs1212441851 616 dbSNP
rs148340715 620 dbSNP
rs1468576410 625 dbSNP
rs1180499431 626 dbSNP
rs1294419042 627 dbSNP
rs1470959578 628 dbSNP
rs1040243362 632 dbSNP
rs1238159095 637 dbSNP
rs1459802017 652 dbSNP
rs1167064355 654 dbSNP
rs1396761414 655 dbSNP
rs1387374030 660 dbSNP
rs1328307236 662 dbSNP
rs943232966 666 dbSNP
rs1444712423 669 dbSNP
rs1028568744 671 dbSNP
rs1355269563 672 dbSNP
rs910474013 674 dbSNP
rs995465831 683 dbSNP
rs868067847 689 dbSNP
rs115965992 692 dbSNP
rs1194672313 696 dbSNP
rs1280194871 697 dbSNP
rs1241333750 698 dbSNP
rs549298525 699 dbSNP
rs1270285990 706 dbSNP
rs1439176143 711 dbSNP
rs143353283 713 dbSNP
rs914629224 716 dbSNP
rs1321459704 721 dbSNP
rs1474131143 731 dbSNP
rs372167223 732 dbSNP
rs1404275807 735 dbSNP
rs988935238 736 dbSNP
rs956145355 737 dbSNP
rs781481373 739 dbSNP
rs1461433857 742 dbSNP
rs779696831 742 dbSNP
rs1411837207 746 dbSNP
rs1308920991 747 dbSNP
rs1375098111 754 dbSNP
rs1417472623 755 dbSNP
rs757558487 756 dbSNP
rs1056967768 768 dbSNP
rs1295508923 774 dbSNP
rs1002734824 786 dbSNP
rs1406860036 788 dbSNP
rs981586504 789 dbSNP
rs1470857605 791 dbSNP
rs1375451412 792 dbSNP
rs536452039 812 dbSNP
rs547491331 816 dbSNP
rs1212670838 827 dbSNP
rs1256670762 832 dbSNP
rs1427847568 834 dbSNP
rs1023248865 842 dbSNP
rs1044371344 844 dbSNP
rs1476406767 847 dbSNP
rs1169345933 853 dbSNP
rs947288135 860 dbSNP
rs892756758 876 dbSNP
rs1433111411 878 dbSNP
rs1052798621 882 dbSNP
rs934389284 885 dbSNP
rs1006285519 890 dbSNP
rs1271488671 894 dbSNP
rs951768059 897 dbSNP
rs1488072835 903 dbSNP
rs1285264939 904 dbSNP
rs1228439913 907 dbSNP
rs986923538 908 dbSNP
rs1345278897 913 dbSNP
rs1225712324 914 dbSNP
rs1342895590 918 dbSNP
rs1236127107 920 dbSNP
rs1256338160 922 dbSNP
rs1274346233 926 dbSNP
rs1222823646 930 dbSNP
rs1263717650 941 dbSNP
rs1465296929 943 dbSNP
rs527258847 948 dbSNP
rs138346232 952 dbSNP
rs974263675 960 dbSNP
rs1397958905 969 dbSNP
rs891846844 970 dbSNP
rs1453434454 971 dbSNP
rs76316879 972 dbSNP
rs544653260 980 dbSNP
rs1387690739 981 dbSNP
rs1402100039 982 dbSNP
rs1324630471 984 dbSNP
rs1301476896 985 dbSNP
rs1368197082 985 dbSNP
rs1442622701 985 dbSNP
rs777762354 985 dbSNP
rs1262288005 989 dbSNP
rs1026416285 990 dbSNP
rs1175171666 991 dbSNP
rs993216611 992 dbSNP
rs1329765138 997 dbSNP
rs1213061553 1000 dbSNP
rs963005837 1003 dbSNP
rs1193012808 1004 dbSNP
rs1467233169 1004 dbSNP
rs1015987555 1017 dbSNP
rs1475266813 1018 dbSNP
rs1243073347 1021 dbSNP
rs1414738645 1028 dbSNP
rs982826906 1034 dbSNP
rs575923006 1044 dbSNP
rs1440978564 1046 dbSNP
rs961062521 1048 dbSNP
rs1035136141 1051 dbSNP
rs1262579859 1056 dbSNP
rs1372092682 1058 dbSNP
rs901600054 1069 dbSNP
rs1040192494 1074 dbSNP
rs1350922629 1082 dbSNP
rs1232578674 1087 dbSNP
rs905653701 1093 dbSNP
rs1216748070 1099 dbSNP
rs1360941030 1106 dbSNP
rs1007438423 1109 dbSNP
rs1332273668 1117 dbSNP
rs758946707 1135 dbSNP
rs745343816 1139 dbSNP
rs1254390001 1142 dbSNP
rs1022809757 1144 dbSNP
rs1187718661 1157 dbSNP
rs1011877172 1162 dbSNP
rs1270557707 1167 dbSNP
rs1426091759 1174 dbSNP
rs1432453620 1176 dbSNP
rs562811705 1180 dbSNP
rs1460121104 1181 dbSNP
rs1309518870 1186 dbSNP
rs1370807643 1187 dbSNP
rs1053188112 1191 dbSNP
rs554049781 1207 dbSNP
rs542414972 1212 dbSNP
rs753236541 1213 dbSNP
rs934379996 1224 dbSNP
rs1228877095 1229 dbSNP
rs914556876 1230 dbSNP
rs1053063706 1236 dbSNP
rs934714305 1242 dbSNP
rs1050763217 1251 dbSNP
rs144591279 1256 dbSNP
rs1202553715 1259 dbSNP
rs981565290 1260 dbSNP
rs1276990727 1266 dbSNP
rs1483509052 1270 dbSNP
rs1169098279 1271 dbSNP
rs1409906091 1278 dbSNP
rs948916005 1293 dbSNP
rs921403220 1295 dbSNP
rs1255925712 1299 dbSNP
rs1471923012 1301 dbSNP
rs553943703 1326 dbSNP
rs1416002362 1353 dbSNP
rs916129316 1355 dbSNP
rs1163886909 1372 dbSNP
rs754500824 1384 dbSNP
rs974231076 1387 dbSNP
rs1426168457 1394 dbSNP
rs985035103 1396 dbSNP
rs1390330751 1403 dbSNP
rs952409882 1413 dbSNP
rs181896594 1438 dbSNP
rs960777810 1442 dbSNP
rs1448642878 1444 dbSNP
rs1288167756 1449 dbSNP
rs971726598 1451 dbSNP
rs753368622 1454 dbSNP
rs1299939102 1455 dbSNP
rs190154152 1459 dbSNP
rs558178494 1461 dbSNP
rs1278598735 1462 dbSNP
rs888979522 1464 dbSNP
rs1444540046 1466 dbSNP
rs1022778652 1482 dbSNP
rs538281111 1485 dbSNP
rs1485179470 1492 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uucCUCGUU-CCGC-CGUAGAGa 5'
             |:||||  | | | : ||| 
Target 5' ccuGGGCAACAGAGUGAGACUCc 3'
14 - 36
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903829
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_a
Location of target site NM_001134659 | 3UTR | GCACUCCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903830
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_b
Location of target site NM_001134659 | 3UTR | CUCCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903831
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_a
Location of target site NM_001134659 | 3UTR | CUCCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_001134659 | 3UTR | GCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_001134659 | 3UTR | GCCAUUGCACUCCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_001134659 | 3UTR | CUCCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000383163.2 | 3UTR | CAUUGCACUCCAGCCUGGGCAACAGAGUGAGACUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
94 hsa-miR-4708-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT095681 RBM27 RNA binding motif protein 27 2 4
MIRT104033 USP42 ubiquitin specific peptidase 42 2 6
MIRT114773 CMPK1 cytidine/uridine monophosphate kinase 1 2 2
MIRT246923 CCND1 cyclin D1 2 2
MIRT392569 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT443949 LRIT3 leucine rich repeat, Ig-like and transmembrane domains 3 2 2
MIRT446695 PAPPA pappalysin 1 2 2
MIRT447383 VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 2 2
MIRT449321 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT449717 C1orf61 chromosome 1 open reading frame 61 2 2
MIRT449738 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 2 2
MIRT450531 PGLS 6-phosphogluconolactonase 2 2
MIRT455650 YARS tyrosyl-tRNA synthetase 2 2
MIRT458036 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT463468 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT466677 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 2 4
MIRT467789 SLC2A14 solute carrier family 2 member 14 2 2
MIRT468167 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT468652 SECISBP2L SECIS binding protein 2 like 2 6
MIRT469380 RER1 retention in endoplasmic reticulum sorting receptor 1 2 2
MIRT470346 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT472418 NCKAP1 NCK associated protein 1 2 2
MIRT474612 KLF3 Kruppel like factor 3 2 2
MIRT478703 CSRNP2 cysteine and serine rich nuclear protein 2 2 2
MIRT481008 BBC3 BCL2 binding component 3 2 4
MIRT483098 TFPI tissue factor pathway inhibitor 2 2
MIRT485113 SHISA6 shisa family member 6 2 2
MIRT497533 ZNF607 zinc finger protein 607 2 2
MIRT500644 TUBB2A tubulin beta 2A class IIa 2 6
MIRT500890 STRN striatin 2 4
MIRT501900 MED13 mediator complex subunit 13 2 2
MIRT506646 MAPK1 mitogen-activated protein kinase 1 2 4
MIRT512675 ENO4 enolase family member 4 2 2
MIRT516977 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT528754 RPS27 ribosomal protein S27 2 6
MIRT539670 ZBTB44 zinc finger and BTB domain containing 44 2 2
MIRT544129 PPIL1 peptidylprolyl isomerase like 1 2 2
MIRT546382 STOX2 storkhead box 2 2 4
MIRT562143 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT568713 TMEM30B transmembrane protein 30B 2 2
MIRT571029 CENPP centromere protein P 2 2
MIRT572781 ZNF277 zinc finger protein 277 2 2
MIRT573162 SLC30A9 solute carrier family 30 member 9 2 2
MIRT609126 NUDT3 nudix hydrolase 3 2 2
MIRT609284 OAS3 2'-5'-oligoadenylate synthetase 3 2 2
MIRT613430 GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 2 2
MIRT613770 TTC38 tetratricopeptide repeat domain 38 2 2
MIRT616645 LRAT lecithin retinol acyltransferase 2 4
MIRT630892 SLC25A33 solute carrier family 25 member 33 2 2
MIRT636526 FAXC failed axon connections homolog 2 4
MIRT641394 NUBPL nucleotide binding protein like 2 2
MIRT641412 SCN2B sodium voltage-gated channel beta subunit 2 2 2
MIRT642528 CERS4 ceramide synthase 4 2 2
MIRT643186 HYPK huntingtin interacting protein K 2 2
MIRT647800 FRMD8 FERM domain containing 8 2 2
MIRT652150 TRIM71 tripartite motif containing 71 2 2
MIRT652602 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT661606 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT666339 SKAP2 src kinase associated phosphoprotein 2 2 2
MIRT670414 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT671122 ZNF573 zinc finger protein 573 2 2
MIRT671155 ANKRD9 ankyrin repeat domain 9 2 2
MIRT671338 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT671869 ZNF429 zinc finger protein 429 2 2
MIRT671974 IKZF3 IKAROS family zinc finger 3 2 2
MIRT672064 KIAA0930 KIAA0930 2 2
MIRT672654 SLC25A16 solute carrier family 25 member 16 2 4
MIRT672673 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT672771 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672929 LRRC2 leucine rich repeat containing 2 2 2
MIRT673159 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673272 RUNDC1 RUN domain containing 1 2 2
MIRT673332 THAP1 THAP domain containing 1 2 2
MIRT673351 SLC35F6 solute carrier family 35 member F6 2 2
MIRT673667 ZNF440 zinc finger protein 440 2 2
MIRT673904 DCTN6 dynactin subunit 6 2 2
MIRT674096 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674401 MYCBP MYC binding protein 2 2
MIRT674525 PRR23A proline rich 23A 2 2
MIRT674793 NPR1 natriuretic peptide receptor 1 2 2
MIRT674833 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 2
MIRT675066 FGD6 FYVE, RhoGEF and PH domain containing 6 2 2
MIRT675080 CCR6 C-C motif chemokine receptor 6 2 2
MIRT675126 FSD2 fibronectin type III and SPRY domain containing 2 2 2
MIRT679401 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT689229 RPS19 ribosomal protein S19 2 2
MIRT694008 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT699671 SFT2D2 SFT2 domain containing 2 2 2
MIRT706213 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT706548 GJD2 gap junction protein delta 2 2 2
MIRT707418 RRP7A ribosomal RNA processing 7 homolog A 2 2
MIRT710648 GLUL glutamate-ammonia ligase 2 2
MIRT719393 NPCA1 Nasopharyngeal carcinoma 1 2 2
MIRT720166 PNPO pyridoxamine 5'-phosphate oxidase 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4708-5p Fulvestrant 17756771 NSC719276 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-4708-5p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-4708-5p Tripterygium wilfordii Hook F sensitive tissue
hsa-miR-4708-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-4708-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4708-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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