pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PLCE1   
Synonyms NPHS3, PLCE, PPLC
Description phospholipase C epsilon 1
Transcript NM_001165979   
Other Transcripts NM_016341   
Expression
Putative miRNA Targets on PLCE1
3'UTR of PLCE1
(miRNA target sites are highlighted)
>PLCE1|NM_001165979|3'UTR
   1 CTAAGGGCAGCATGTTTAACCCAGGTGAAGATCTTTAAGCAAGAAGTTAAAGAGTGAACATGGTGGAAAAAATATAATTA
  81 TTTTCATCAGACTTAAACTGGAAATTGATGATTTCTGAACTGAAGCCTTCACACATGTGAGATCCATGCTGAGGAGAAGC
 161 AAAATGGCACAGGGCTAGTTGCCACCAACCAATTTACTGATGAATGAAGCCCAGGGGACTGCCATTTTATAAATGTCAGC
 241 AGTTGGAAAAATCGTCACGAATTGACTTAGAGCAAGGGTCAGCAAGCTTGTCTGTAAAGGGCCAAACAGTAAATATTTTA
 321 GGGCTGGGGGCCATAAAATATGTTGCAACCACCCAATTCTGCCATTGTAGTGCAAAAGCAGCCATAGACAACACATACAT
 401 GAACGAACGTGGCTGTATTCCAATAAAACTTTATTTATGGACACTGAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugacgucggAAC--UGGAGGGUc 5'
                   |||  ||| |||| 
Target 5' taaaatatgTTGCAACCACCCAa 3'
334 - 356 118.00 -10.70
2
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            || |||     |:|| || 
Target 5' acTGAAGC-----CTTCACAc 3'
119 - 134 98.00 -12.39
3
miRNA  3' ugACGUCGG--AACUGGAGGGUc 5'
            || ||||    |: || ||| 
Target 5' aaTGAAGCCCAGGGGACTGCCAt 3'
203 - 225 93.00 -11.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
877994 6 ClinVar
1203717 206 ClinVar
301735 2892 ClinVar
301736 2980 ClinVar
301737 3030 ClinVar
879457 3060 ClinVar
301738 3083 ClinVar
301739 3084 ClinVar
879458 3096 ClinVar
301740 3117 ClinVar
301741 3132 ClinVar
301742 3254 ClinVar
COSN30448683 22 COSMIC
COSN30521213 37 COSMIC
COSN30105662 73 COSMIC
COSN30156310 105 COSMIC
COSN16458330 115 COSMIC
COSN30136388 132 COSMIC
COSN1507576 686 COSMIC
COSN1507578 689 COSMIC
COSN22980870 948 COSMIC
COSN1507580 1455 COSMIC
COSN22293998 1623 COSMIC
COSN8726890 1898 COSMIC
COSN32049617 2783 COSMIC
COSM8250874 2891 COSMIC
COSM4446877 2894 COSMIC
COSM9714009 2897 COSMIC
COSN30516639 3015 COSMIC
COSN30590043 3026 COSMIC
rs6583939 541 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1364757088 4 dbSNP
rs1398657166 5 dbSNP
rs149932305 6 dbSNP
rs1345618929 7 dbSNP
rs1224752422 8 dbSNP
rs1471036525 9 dbSNP
rs1276071983 11 dbSNP
rs764937532 12 dbSNP
rs1311237801 17 dbSNP
rs754498112 20 dbSNP
rs750278300 22 dbSNP
rs200616060 23 dbSNP
rs751032226 26 dbSNP
rs754473003 27 dbSNP
rs777144709 27 dbSNP
rs778289709 29 dbSNP
rs749750056 31 dbSNP
rs1359027545 49 dbSNP
rs757837128 49 dbSNP
rs1192984796 52 dbSNP
rs1396479402 59 dbSNP
rs963356089 63 dbSNP
rs1172653193 73 dbSNP
rs1375180700 77 dbSNP
rs1413126492 85 dbSNP
rs1184126970 89 dbSNP
rs766000535 91 dbSNP
rs1265633707 101 dbSNP
rs780890293 105 dbSNP
rs1009486389 114 dbSNP
rs1336930471 126 dbSNP
rs1350891308 129 dbSNP
rs1021325861 131 dbSNP
rs754221512 140 dbSNP
rs1003290261 141 dbSNP
rs1035746699 142 dbSNP
rs11187865 149 dbSNP
rs1316431946 155 dbSNP
rs958766472 157 dbSNP
rs1235231157 159 dbSNP
rs1302984418 167 dbSNP
rs1363128283 185 dbSNP
rs991554836 187 dbSNP
rs909380597 188 dbSNP
rs186344040 191 dbSNP
rs1383017315 194 dbSNP
rs536641327 201 dbSNP
rs115483893 206 dbSNP
rs992997045 210 dbSNP
rs972306773 211 dbSNP
rs1456261747 213 dbSNP
rs1273627127 214 dbSNP
rs762152956 215 dbSNP
rs570344364 220 dbSNP
rs1446300028 232 dbSNP
rs1245701234 240 dbSNP
rs1191783428 244 dbSNP
rs1447056573 245 dbSNP
rs1263455787 246 dbSNP
rs1207692476 249 dbSNP
rs932978372 251 dbSNP
rs1196189438 253 dbSNP
rs1051880684 254 dbSNP
rs910242493 256 dbSNP
rs943085885 257 dbSNP
rs1454360010 280 dbSNP
rs1192545029 298 dbSNP
rs765892691 301 dbSNP
rs1328273395 333 dbSNP
rs1053566588 337 dbSNP
rs767981756 342 dbSNP
rs967601199 344 dbSNP
rs1386372409 345 dbSNP
rs893640049 346 dbSNP
rs769687072 349 dbSNP
rs1388299833 353 dbSNP
rs1167228535 370 dbSNP
rs1475493256 371 dbSNP
rs1042271780 374 dbSNP
rs1374276726 382 dbSNP
rs1196319049 384 dbSNP
rs906453928 388 dbSNP
rs1490064118 389 dbSNP
rs1170074249 390 dbSNP
rs1003488778 408 dbSNP
rs1036089795 409 dbSNP
rs1225253072 415 dbSNP
rs1397794740 418 dbSNP
rs1409944999 423 dbSNP
rs1329933607 424 dbSNP
rs1482262376 426 dbSNP
rs1396735309 428 dbSNP
rs958735543 436 dbSNP
rs1012952872 460 dbSNP
rs1196875789 462 dbSNP
rs1341580762 464 dbSNP
rs979013786 469 dbSNP
rs539244504 485 dbSNP
rs1223166038 492 dbSNP
rs1325401171 495 dbSNP
rs1016306809 496 dbSNP
rs936343674 497 dbSNP
rs1406586338 498 dbSNP
rs191242737 499 dbSNP
rs1039149798 500 dbSNP
rs1229303886 503 dbSNP
rs1270604072 504 dbSNP
rs1338535693 512 dbSNP
rs750759280 513 dbSNP
rs1410403673 514 dbSNP
rs1170249339 517 dbSNP
rs1201134553 517 dbSNP
rs1232609057 517 dbSNP
rs1398010259 517 dbSNP
rs1429610205 517 dbSNP
rs1471849951 517 dbSNP
rs77268826 518 dbSNP
rs1205841987 526 dbSNP
rs1440022538 526 dbSNP
rs1203167364 531 dbSNP
rs572117368 531 dbSNP
rs921685318 532 dbSNP
rs1265304674 535 dbSNP
rs1274984052 535 dbSNP
rs1468493143 536 dbSNP
rs68014126 536 dbSNP
rs1161397036 537 dbSNP
rs34235039 537 dbSNP
rs1212587661 538 dbSNP
rs1430514977 539 dbSNP
rs34689035 539 dbSNP
rs1264819877 540 dbSNP
rs1368996307 541 dbSNP
rs6583939 541 dbSNP
rs1178089980 543 dbSNP
rs933077734 551 dbSNP
rs1195749511 556 dbSNP
rs1051523349 569 dbSNP
rs142048058 571 dbSNP
rs1244980019 579 dbSNP
rs1026543528 580 dbSNP
rs1169076027 581 dbSNP
rs1316512724 583 dbSNP
rs563262996 587 dbSNP
rs1224173282 593 dbSNP
rs886275358 598 dbSNP
rs955110424 600 dbSNP
rs1037571433 610 dbSNP
rs1325356294 615 dbSNP
rs899114595 620 dbSNP
rs1428242183 621 dbSNP
rs201777555 621 dbSNP
rs987768341 624 dbSNP
rs910210417 633 dbSNP
rs1412057323 637 dbSNP
rs1163519479 645 dbSNP
rs758929979 648 dbSNP
rs989188950 649 dbSNP
rs1387191367 651 dbSNP
rs1319266252 652 dbSNP
rs1325568896 654 dbSNP
rs1485569832 665 dbSNP
rs185975333 679 dbSNP
rs190827686 680 dbSNP
rs545985587 686 dbSNP
rs1448537535 687 dbSNP
rs1289244978 689 dbSNP
rs559234028 714 dbSNP
rs906397937 719 dbSNP
rs939260196 725 dbSNP
rs1245193010 734 dbSNP
rs1360004803 742 dbSNP
rs1034791354 744 dbSNP
rs778018523 751 dbSNP
rs895873009 754 dbSNP
rs756693854 755 dbSNP
rs1263220287 757 dbSNP
rs1014774866 765 dbSNP
rs528288359 769 dbSNP
rs547618693 771 dbSNP
rs1012878776 780 dbSNP
rs751597245 781 dbSNP
rs1428058898 785 dbSNP
rs964669982 787 dbSNP
rs1188513414 795 dbSNP
rs1192021323 795 dbSNP
rs1477141047 798 dbSNP
rs1266538688 802 dbSNP
rs1260195925 809 dbSNP
rs974423389 813 dbSNP
rs561354496 814 dbSNP
rs1475850011 816 dbSNP
rs1202340698 823 dbSNP
rs933045426 824 dbSNP
rs1164725342 830 dbSNP
rs1366756981 831 dbSNP
rs987189026 835 dbSNP
rs1343198879 839 dbSNP
rs530147103 839 dbSNP
rs550172987 840 dbSNP
rs570379588 842 dbSNP
rs907664200 844 dbSNP
rs940523095 860 dbSNP
rs200282989 861 dbSNP
rs757427323 870 dbSNP
rs1355222101 871 dbSNP
rs1037519220 881 dbSNP
rs545181885 881 dbSNP
rs899067848 885 dbSNP
rs538924325 909 dbSNP
rs1200406801 913 dbSNP
rs993620224 914 dbSNP
rs368996860 919 dbSNP
rs1360197641 930 dbSNP
rs1175415092 932 dbSNP
rs1417629127 944 dbSNP
rs7901773 951 dbSNP
rs1055776702 954 dbSNP
rs115779357 962 dbSNP
rs1320754885 975 dbSNP
rs1355985021 978 dbSNP
rs1414039192 985 dbSNP
rs756138562 990 dbSNP
rs1310523168 991 dbSNP
rs1305263549 994 dbSNP
rs1391347837 995 dbSNP
rs954934083 996 dbSNP
rs1014316396 997 dbSNP
rs1020375362 1007 dbSNP
rs147763244 1008 dbSNP
rs1379183952 1022 dbSNP
rs535205272 1027 dbSNP
rs1156604890 1030 dbSNP
rs1418262321 1034 dbSNP
rs1017871385 1050 dbSNP
rs964338625 1060 dbSNP
rs749099768 1065 dbSNP
rs534491694 1068 dbSNP
rs1214880068 1080 dbSNP
rs373048535 1089 dbSNP
rs1000347541 1095 dbSNP
rs114292150 1098 dbSNP
rs945109093 1114 dbSNP
rs976072652 1116 dbSNP
rs1028623221 1117 dbSNP
rs1317892953 1119 dbSNP
rs1309859037 1128 dbSNP
rs1451021469 1133 dbSNP
rs1382129510 1139 dbSNP
rs1181720710 1143 dbSNP
rs1454799660 1152 dbSNP
rs11187866 1155 dbSNP
rs778862976 1157 dbSNP
rs987134899 1159 dbSNP
rs1364105496 1166 dbSNP
rs939203328 1169 dbSNP
rs183418042 1174 dbSNP
rs1442661232 1200 dbSNP
rs907610255 1200 dbSNP
rs1183722281 1202 dbSNP
rs754487053 1202 dbSNP
rs895080917 1205 dbSNP
rs1259313109 1210 dbSNP
rs948699402 1216 dbSNP
rs920443799 1219 dbSNP
rs1375795304 1221 dbSNP
rs1037648127 1234 dbSNP
rs10882424 1242 dbSNP
rs993980594 1245 dbSNP
rs1359287111 1247 dbSNP
rs1026437225 1255 dbSNP
rs1056127588 1258 dbSNP
rs1248307319 1261 dbSNP
rs1324755297 1262 dbSNP
rs1398616725 1265 dbSNP
rs1391455302 1266 dbSNP
rs1382928157 1269 dbSNP
rs556497139 1273 dbSNP
rs1299761148 1282 dbSNP
rs117149466 1284 dbSNP
rs1009074091 1286 dbSNP
rs1364927820 1289 dbSNP
rs950029623 1296 dbSNP
rs1473527738 1299 dbSNP
rs1017840170 1306 dbSNP
rs1192028397 1314 dbSNP
rs545823119 1315 dbSNP
rs964974730 1321 dbSNP
rs1011184198 1326 dbSNP
rs1220778552 1329 dbSNP
rs1235996143 1335 dbSNP
rs556285379 1340 dbSNP
rs559591094 1342 dbSNP
rs966443111 1343 dbSNP
rs978208079 1344 dbSNP
rs1337539229 1345 dbSNP
rs1228463625 1361 dbSNP
rs1269633137 1361 dbSNP
rs1054589322 1364 dbSNP
rs1348978039 1370 dbSNP
rs1281580138 1378 dbSNP
rs1402943522 1379 dbSNP
rs927745211 1389 dbSNP
rs1303703935 1403 dbSNP
rs1406950251 1410 dbSNP
rs900005857 1410 dbSNP
rs772613498 1414 dbSNP
rs990632126 1418 dbSNP
rs79592553 1419 dbSNP
rs555303277 1420 dbSNP
rs1038284148 1421 dbSNP
rs1195658653 1424 dbSNP
rs1269974647 1426 dbSNP
rs1395930862 1434 dbSNP
rs1432370185 1439 dbSNP
rs1008502475 1462 dbSNP
rs1436530642 1477 dbSNP
rs1272901510 1479 dbSNP
rs1014554933 1485 dbSNP
rs1173771188 1486 dbSNP
rs1374705807 1488 dbSNP
rs561391323 1490 dbSNP
rs1344641113 1491 dbSNP
rs114444196 1492 dbSNP
rs929324871 1496 dbSNP
rs1438550287 1499 dbSNP
rs973131012 1500 dbSNP
rs1328060055 1502 dbSNP
rs1391526657 1515 dbSNP
rs1442481584 1518 dbSNP
rs1326152764 1519 dbSNP
rs1173826373 1523 dbSNP
rs1468932155 1527 dbSNP
rs1366550733 1528 dbSNP
rs1218977674 1534 dbSNP
rs1174733244 1537 dbSNP
rs551346965 1538 dbSNP
rs920407517 1540 dbSNP
rs1048240683 1541 dbSNP
rs890556599 1544 dbSNP
rs550209907 1556 dbSNP
rs991376892 1573 dbSNP
rs917137754 1576 dbSNP
rs1039199623 1578 dbSNP
rs1309654550 1581 dbSNP
rs1041712547 1585 dbSNP
rs1228744097 1586 dbSNP
rs924607965 1593 dbSNP
rs1278942528 1597 dbSNP
rs1240709103 1603 dbSNP
rs1257982184 1604 dbSNP
rs1456452650 1618 dbSNP
rs1334066477 1620 dbSNP
rs74153304 1621 dbSNP
rs1406419211 1622 dbSNP
rs1054938886 1625 dbSNP
rs1399378770 1627 dbSNP
rs1011162886 1629 dbSNP
rs899952047 1631 dbSNP
rs1442044241 1639 dbSNP
rs192520877 1640 dbSNP
rs776324371 1647 dbSNP
rs966747006 1653 dbSNP
rs1461800880 1665 dbSNP
rs147589235 1676 dbSNP
rs1213888037 1682 dbSNP
rs182602963 1684 dbSNP
rs1035159864 1686 dbSNP
rs1283211001 1687 dbSNP
rs1240818477 1690 dbSNP
rs960469527 1691 dbSNP
rs1014505349 1696 dbSNP
rs1312798078 1697 dbSNP
rs1244696136 1700 dbSNP
rs1379248084 1702 dbSNP
rs1285609155 1703 dbSNP
rs961696244 1704 dbSNP
rs1345005913 1705 dbSNP
rs994546626 1713 dbSNP
rs1421882045 1715 dbSNP
rs1027814641 1718 dbSNP
rs1364295252 1718 dbSNP
rs958508554 1718 dbSNP
rs990558421 1727 dbSNP
rs1462557032 1728 dbSNP
rs1242895500 1729 dbSNP
rs917102415 1733 dbSNP
rs1348920029 1734 dbSNP
rs1433790855 1736 dbSNP
rs916406824 1743 dbSNP
rs1299736521 1746 dbSNP
rs373439427 1749 dbSNP
rs1321798436 1753 dbSNP
rs1291355599 1756 dbSNP
rs1364443813 1758 dbSNP
rs1212463349 1763 dbSNP
rs977342773 1766 dbSNP
rs924555523 1769 dbSNP
rs935982242 1773 dbSNP
rs1401004573 1780 dbSNP
rs1054482238 1788 dbSNP
rs1278105918 1789 dbSNP
rs1344007440 1789 dbSNP
rs78898768 1792 dbSNP
rs114371209 1793 dbSNP
rs929268508 1797 dbSNP
rs140548591 1799 dbSNP
rs911903048 1806 dbSNP
rs12221079 1807 dbSNP
rs1424695008 1810 dbSNP
rs567823519 1819 dbSNP
rs536698279 1820 dbSNP
rs940243310 1824 dbSNP
rs900635054 1830 dbSNP
rs1037238719 1832 dbSNP
rs1198644104 1833 dbSNP
rs1244075969 1838 dbSNP
rs1248360954 1844 dbSNP
rs1486064746 1848 dbSNP
rs1011087912 1852 dbSNP
rs541828595 1853 dbSNP
rs902784056 1856 dbSNP
rs1220024934 1857 dbSNP
rs1321855942 1863 dbSNP
rs1282992281 1864 dbSNP
rs1387881233 1867 dbSNP
rs1370415677 1869 dbSNP
rs1000210743 1874 dbSNP
rs1441644368 1875 dbSNP
rs1027354427 1882 dbSNP
rs1173100279 1888 dbSNP
rs1468395309 1892 dbSNP
rs894190112 1902 dbSNP
rs1426970370 1904 dbSNP
rs1188595366 1908 dbSNP
rs377697250 1909 dbSNP
rs1269456244 1917 dbSNP
rs1175398160 1921 dbSNP
rs1012687809 1923 dbSNP
rs1238178680 1923 dbSNP
rs1276152557 1925 dbSNP
rs1200172457 1928 dbSNP
rs1262091963 1931 dbSNP
rs1403100692 1931 dbSNP
rs896190451 1941 dbSNP
rs1345474844 1944 dbSNP
rs1024109390 1950 dbSNP
rs1011948352 1955 dbSNP
rs114817478 1956 dbSNP
rs1339707772 1963 dbSNP
rs962484278 1975 dbSNP
rs572719023 1976 dbSNP
rs1450516899 1978 dbSNP
rs1405677941 1986 dbSNP
rs1303639816 1989 dbSNP
rs775945153 1991 dbSNP
rs951309423 1997 dbSNP
rs541397248 1998 dbSNP
rs911897007 2008 dbSNP
rs944694064 2014 dbSNP
rs867195405 2015 dbSNP
rs1031571457 2016 dbSNP
rs974792530 2021 dbSNP
rs1226744148 2031 dbSNP
rs922026946 2032 dbSNP
rs957338664 2035 dbSNP
rs1484447804 2036 dbSNP
rs990527062 2037 dbSNP
rs1215734210 2039 dbSNP
rs946844818 2040 dbSNP
rs1312061489 2051 dbSNP
rs746770440 2054 dbSNP
rs150466922 2060 dbSNP
rs370202463 2061 dbSNP
rs986912611 2065 dbSNP
rs763565280 2068 dbSNP
rs1057156429 2069 dbSNP
rs1418840943 2075 dbSNP
rs1236848931 2076 dbSNP
rs896115532 2077 dbSNP
rs1178493433 2079 dbSNP
rs1367311782 2081 dbSNP
rs1187859343 2090 dbSNP
rs912680770 2091 dbSNP
rs1408219913 2095 dbSNP
rs1193449974 2104 dbSNP
rs1011874630 2110 dbSNP
rs1023311790 2111 dbSNP
rs1438745891 2116 dbSNP
rs1037184890 2117 dbSNP
rs898267021 2119 dbSNP
rs1247288546 2127 dbSNP
rs995686082 2127 dbSNP
rs564683843 2132 dbSNP
rs898741032 2134 dbSNP
rs573066964 2136 dbSNP
rs1340836731 2150 dbSNP
rs1299969395 2155 dbSNP
rs542062643 2157 dbSNP
rs533616331 2164 dbSNP
rs1163388372 2167 dbSNP
rs1458968706 2190 dbSNP
rs1443962274 2191 dbSNP
rs1436989448 2193 dbSNP
rs1478358873 2197 dbSNP
rs555561366 2199 dbSNP
rs986698463 2208 dbSNP
rs1019959494 2216 dbSNP
rs966008460 2219 dbSNP
rs17438706 2220 dbSNP
rs1268639432 2222 dbSNP
rs9665608 2228 dbSNP
rs1337519067 2230 dbSNP
rs946771076 2232 dbSNP
rs1219410320 2233 dbSNP
rs563787579 2254 dbSNP
rs979958480 2258 dbSNP
rs1279809459 2278 dbSNP
rs998672673 2280 dbSNP
rs924129549 2281 dbSNP
rs138318806 2282 dbSNP
rs750631938 2284 dbSNP
rs1388067573 2287 dbSNP
rs1393616613 2294 dbSNP
rs188161459 2306 dbSNP
rs990085837 2309 dbSNP
rs756288945 2310 dbSNP
rs548985790 2313 dbSNP
rs528717345 2314 dbSNP
rs954065650 2315 dbSNP
rs1044691702 2316 dbSNP
rs1378783776 2319 dbSNP
rs1201575128 2321 dbSNP
rs1436158852 2324 dbSNP
rs1237600502 2325 dbSNP
rs1199532346 2330 dbSNP
rs1440666157 2331 dbSNP
rs1459301602 2333 dbSNP
rs1388409439 2340 dbSNP
rs1205977240 2344 dbSNP
rs1238199143 2348 dbSNP
rs1456936735 2368 dbSNP
rs1176339365 2371 dbSNP
rs565800199 2376 dbSNP
rs1396574776 2381 dbSNP
rs1275379005 2385 dbSNP
rs1455856104 2394 dbSNP
rs898193405 2395 dbSNP
rs1374052005 2396 dbSNP
rs986803098 2401 dbSNP
rs1235924324 2406 dbSNP
rs1446854948 2418 dbSNP
rs1425055579 2420 dbSNP
rs758338478 2423 dbSNP
rs1334278085 2425 dbSNP
rs995256687 2428 dbSNP
rs535890255 2431 dbSNP
rs1403276077 2438 dbSNP
rs940138037 2444 dbSNP
rs116867669 2450 dbSNP
rs370876878 2454 dbSNP
rs1441621844 2455 dbSNP
rs931520254 2456 dbSNP
rs1329544885 2457 dbSNP
rs1279017372 2459 dbSNP
rs1373549458 2463 dbSNP
rs1233659080 2464 dbSNP
rs1274075618 2465 dbSNP
rs1351482430 2466 dbSNP
rs1008493033 2467 dbSNP
rs1308403139 2467 dbSNP
rs1378454487 2467 dbSNP
rs1342637590 2469 dbSNP
rs1019520578 2470 dbSNP
rs1216214446 2470 dbSNP
rs1258649126 2471 dbSNP
rs1282075260 2481 dbSNP
rs71480901 2484 dbSNP
rs1316739778 2495 dbSNP
rs568359223 2510 dbSNP
rs557167609 2514 dbSNP
rs963939675 2530 dbSNP
rs1336612788 2531 dbSNP
rs573691748 2539 dbSNP
rs551414701 2545 dbSNP
rs1254457031 2549 dbSNP
rs1451873356 2550 dbSNP
rs1421610088 2553 dbSNP
rs996795788 2553 dbSNP
rs1383386409 2560 dbSNP
rs1246451533 2572 dbSNP
rs1473218103 2579 dbSNP
rs557046196 2589 dbSNP
rs569344318 2595 dbSNP
rs1189408835 2603 dbSNP
rs948393256 2608 dbSNP
rs1028990156 2616 dbSNP
rs1465164640 2618 dbSNP
rs1217166244 2619 dbSNP
rs1355270031 2627 dbSNP
rs747258504 2631 dbSNP
rs1227225126 2637 dbSNP
rs1379498156 2642 dbSNP
rs906922778 2645 dbSNP
rs1398605099 2653 dbSNP
rs968493721 2654 dbSNP
rs1299345413 2660 dbSNP
rs11187869 2661 dbSNP
rs892977395 2674 dbSNP
rs1323173924 2677 dbSNP
rs1405994380 2683 dbSNP
rs879332055 2683 dbSNP
rs1011859272 2686 dbSNP
rs1028238872 2696 dbSNP
rs1262155046 2705 dbSNP
rs954123006 2708 dbSNP
rs1278763589 2709 dbSNP
rs1489258697 2709 dbSNP
rs1008170625 2711 dbSNP
rs1321784413 2711 dbSNP
rs924028539 2713 dbSNP
rs1019588489 2714 dbSNP
rs961420726 2725 dbSNP
rs1220821602 2727 dbSNP
rs1317267125 2738 dbSNP
rs1293453983 2741 dbSNP
rs1437350906 2741 dbSNP
rs972796404 2746 dbSNP
rs570509242 2753 dbSNP
rs920056129 2769 dbSNP
rs1356477486 2772 dbSNP
rs1208804788 2778 dbSNP
rs539085954 2781 dbSNP
rs552901819 2786 dbSNP
rs1190497362 2789 dbSNP
rs1450222370 2790 dbSNP
rs1196377217 2794 dbSNP
rs992754564 2804 dbSNP
rs991417025 2809 dbSNP
rs1196391483 2810 dbSNP
rs566663831 2811 dbSNP
rs949626869 2820 dbSNP
rs1220920021 2824 dbSNP
rs1192152452 2825 dbSNP
rs535701895 2827 dbSNP
rs1307239553 2828 dbSNP
rs948292708 2828 dbSNP
rs113301723 2832 dbSNP
rs892917263 2832 dbSNP
rs1333606604 2836 dbSNP
rs149647941 2846 dbSNP
rs746272652 2848 dbSNP
rs145174290 2856 dbSNP
rs1347347625 2859 dbSNP
rs759751018 2860 dbSNP
rs1298136356 2861 dbSNP
rs1267576679 2863 dbSNP
rs866256878 2864 dbSNP
rs1176279516 2868 dbSNP
rs1406305724 2871 dbSNP
rs745533827 2874 dbSNP
rs765627678 2876 dbSNP
rs1224025853 2880 dbSNP
rs768622758 2881 dbSNP
rs776838414 2884 dbSNP
rs1215544947 2886 dbSNP
rs761643951 2887 dbSNP
rs1490815454 2888 dbSNP
rs3203713 2892 dbSNP
rs775922374 2895 dbSNP
rs772961752 2898 dbSNP
rs1178018416 2899 dbSNP
rs1382337452 2900 dbSNP
rs191878411 2907 dbSNP
rs763496536 2912 dbSNP
rs1464907685 2919 dbSNP
rs1189961208 2920 dbSNP
rs765970558 2920 dbSNP
rs1008001465 2923 dbSNP
rs1019536556 2925 dbSNP
rs1322104106 2927 dbSNP
rs751230289 2929 dbSNP
rs764202676 2930 dbSNP
rs751602724 2932 dbSNP
rs759024887 2933 dbSNP
rs757493640 2934 dbSNP
rs576903960 2937 dbSNP
rs1376726345 2938 dbSNP
rs1361550737 2941 dbSNP
rs1302094952 2945 dbSNP
rs1466330009 2948 dbSNP
rs752297646 2952 dbSNP
rs1362411807 2953 dbSNP
rs767668379 2954 dbSNP
rs1157860783 2956 dbSNP
rs757671049 2956 dbSNP
rs1288994593 2957 dbSNP
rs779591551 2963 dbSNP
rs750765503 2964 dbSNP
rs750225258 2967 dbSNP
rs1421740084 2969 dbSNP
rs758845393 2969 dbSNP
rs775998675 2974 dbSNP
rs886047506 2980 dbSNP
rs1027051042 2990 dbSNP
rs899701528 2992 dbSNP
rs952933826 2995 dbSNP
rs1424471445 2998 dbSNP
rs1186983519 3011 dbSNP
rs1216446005 3015 dbSNP
rs996764468 3021 dbSNP
rs11187870 3030 dbSNP
rs764568175 3031 dbSNP
rs1441728722 3048 dbSNP
rs970929348 3049 dbSNP
rs1001286005 3056 dbSNP
rs1396445104 3057 dbSNP
rs754510047 3065 dbSNP
rs1031060752 3067 dbSNP
rs1159511346 3078 dbSNP
rs1359590580 3080 dbSNP
rs376587612 3083 dbSNP
rs184484950 3084 dbSNP
rs553328712 3089 dbSNP
rs796811868 3094 dbSNP
rs918075400 3095 dbSNP
rs1367591988 3096 dbSNP
rs542154992 3102 dbSNP
rs1402904459 3104 dbSNP
rs1476395464 3112 dbSNP
rs79412094 3117 dbSNP
rs138795090 3118 dbSNP
rs934312433 3122 dbSNP
rs920194264 3123 dbSNP
rs141966806 3126 dbSNP
rs1308082830 3128 dbSNP
rs982839227 3129 dbSNP
rs146319051 3132 dbSNP
rs533005572 3134 dbSNP
rs943778663 3136 dbSNP
rs1247176553 3137 dbSNP
rs1336715939 3149 dbSNP
rs1276014778 3157 dbSNP
rs1040856592 3158 dbSNP
rs1049559770 3159 dbSNP
rs1341129147 3166 dbSNP
rs899629411 3168 dbSNP
rs546283067 3178 dbSNP
rs1200412838 3180 dbSNP
rs1254127496 3194 dbSNP
rs566520124 3199 dbSNP
rs1042966285 3205 dbSNP
rs1459149862 3209 dbSNP
rs1389307207 3220 dbSNP
rs889621726 3226 dbSNP
rs1179432863 3229 dbSNP
rs535434087 3235 dbSNP
rs201122307 3237 dbSNP
rs1284873710 3242 dbSNP
rs555726388 3249 dbSNP
rs1170458815 3253 dbSNP
rs886047507 3254 dbSNP
rs1375343118 3260 dbSNP
rs994114853 3262 dbSNP
rs1451113970 3263 dbSNP
rs888512818 3264 dbSNP
rs892500911 3264 dbSNP
rs1012747218 3265 dbSNP
rs569145509 3267 dbSNP
rs1013618747 3269 dbSNP
rs1197845455 3272 dbSNP
rs767671259 3273 dbSNP
rs969502125 3279 dbSNP
rs116808240 3285 dbSNP
rs750458075 3292 dbSNP
rs1230927854 3293 dbSNP
rs1401757374 3293 dbSNP
rs760903244 3295 dbSNP
rs1330263837 3302 dbSNP
rs983090349 3303 dbSNP
rs908202595 3311 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugacgucGGAACUGGAGGGUc 5'
                 |||  |||||||| 
Target 5' ------aCCUCCACCUCCCAg 3'
1 - 15
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000371380.3 | 3UTR | ACCUCCACCUCCCAGGUUCAAGUGAUUCUCCUGCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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