miRTarBase - #MIRT675126


—
pre-miRNA Information
pre-miRNA hsa-mir-4708   
Genomic Coordinates chr14: 65335117 - 65335183
Description Homo sapiens miR-4708 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4708-5p
Sequence 9| AGAGAUGCCGCCUUGCUCCUU |29
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1017378847 9 dbSNP
rs750825813 10 dbSNP
rs1297395738 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol FSD2   
Synonyms SPRYD1
Description fibronectin type III and SPRY domain containing 2
Transcript NM_001007122   
Expression
Putative miRNA Targets on FSD2
3'UTR of FSD2
(miRNA target sites are highlighted)		 
>FSD2|NM_001007122|3'UTR
   1 AACATTCTGATGTCCAGTTTCCTGTCTTCCATGCCTACCCCTCTCGCAGCTGCTCACGCCTTAGCTGGCTGAACCTGGCA
  81 CTTAAGCACCATGTGCCCAGCACAATTTATGGCTCATGCTATTATCTGACTGGTGTGCTAGCGCTCATTTCACCCAACCT
 161 GGATTCTAGTCCTGTGTGCTGCTACCTGTGTGCTGCTAGGATAGTCATTACCAGGCCCAGCTGTAAAATAAAGGCTCAGA
 241 CTAAACGAACTCAAAAGTCTTTGAAGCTGTCAAACTATATTCGTGTATATGCAAAATATCTTGAGTTTCCAAGACCTAGA
 321 GAGCTTGGGAGAGGACGAGGGTAGTCTTAATGGCTCCAGCAGCACCAGTACACCCATGCATTTCATGAGTCAGCCAAGAA
 401 TACACTTGAGAAGGCGAGAGGCTGTCTGTAGAGAACCAGGGAAGCTGTGTGCCCTTCTCAATGTCTTCTACCCTCGTTTT
 481 CCCAATAGTGAGCAGCACTGTGGTGAGGTCCCTTCCACTGTGTACTCTGCATACAGGGTATTCCCTGTTCCACTCCTACA
 561 CAGTATGCACCACTCTCTAATTTTGAAATTACCTCTATAATGCCTAATTCCATGAAGGGAGGGACAGTGCCTGTTTTGTT
 641 CATTGCTAGATCACCAAGGGCTAACACATAACAGCTGTCACCAAGTATTTGTTGAATAAATTAGTATCTTCTTCAGCCAC
 721 TGCTCTTTGGCCTCTTACTGCTCTCCATGTGAAGGATGGCAGGGCTCTTTCAAAACTACAGCAAAGGACCTATGGCCAAG
 801 AAATGGGAAAAAACCTAGAATGGAGGCAGCGTGAAAGAACAGAAGGGCATCTGTGGCATATTAGCAAATGCACAACAATT
 881 TTTTAAAAGAAATTAACAGCCCACCAAAGGGCAAAGCTGAGCACGGGAAGGAAGACTGATCTCTAGCTAGGCAGCTTTCA
 961 GGCATCCTGCCTCACTGCCCCCAGGCCATTCTGTGAGCTCAATGCCCAACTCCATCAGCTACATTCCTGGTTCTCCTGTT
1041 CAAGTTTCCAGTTGCCACTTAAGCTCTGCACACACAGCATTTTCAAAGCTTGTGAGTGAAGCTGCAGAATAATTCCATTT
1121 GTGAAGCAATTACAATTCAGTATCATGTCCCACAGATGCCTCTAAACCCAGATATGCCCTAATCTCATCATTTAAGGTTT
1201 TGTGTTTAAAAAAAAAAAGTCCACTTTTCTTTTTTCTGGCGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGG
1281 CATGGTGGTGGGCGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGGGCAGAGGCTGC
1361 AGTGAGCCGAGATTGTGCCACTGCACTCCAGCCTTGGCAACAAGAGCGCAACTCTGTCTCAAAAACAAACAAACAAACAA
1441 ACAAAAAACCTCTGATGTTTTCCAGCACCTGCAAAGTCTGACAAACTGAAAGACTCTCATCTCCTACTAAACTCTGCCTA
1521 CTCGTATAAATGGCAGCTCAGATTCCTGAATTAACAATTCACACTGACAATTTAATAACTCGTTATACACACACACACCT
1601 ATCCTGCCAAGCTGGACTGTCTACTCTGAAACAAGGGACAGCAGATGTAAGCACAGAAATAGTTCCAGTTATAAACAATT
1681 AAAAGATACATATCATGTATATTTAAAAATGTTCTCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGG
1761 GGCCAAGGTGGATGGATCACAAGGTCAGGAGATCGAGACCATCCTGGCTAATACGGTGAAACCCCGTCTCTACTAAAAAT
1841 ACAAAAAAATTAGCCGGGACTGGTGGCGGGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAA
1921 CCCGGGAGGTGGAGCTTGCAGTGAGCCGAGATGGCTCACAGATCAAGACTCCATCTCAAAAAAAAAAAAAAAAAAAGTTC
2001 TCAGCTACTGAAATAGAAACTACCAAGTAAGAAACAGGATATCACAGAGAAGGCAAGTTTGAATTCAGGGTTCTAATAGG
2081 CTTTATGGAATACTACACGTTAGTATGAACACGGATAAATGGATTAAAAACTCAACACGTATAAAGTTTTAATTAAATTT
2161 TTATTTGACCAAGAAAAAACTGTCTAGAATTGCCTGACATTTAAAATCCACTTAAAGCAGATTAGCAACTTCAAGCATCA
2241 CAATTATTCAGCATAAAGAGCCTTTGTTGAAACATCTTTCTCATTTATTTAGAAGAAAACATCTAGAACAGAACCAAGCA
2321 AAACTTTTGTATTTTTGTAAAAAATCTCAATTCCTGAAACTACTATAAACAATCTACTGAAACTGTATTCAGCAAGGGAC
2401 AGATTTACCTCAAGGCCATGTTCACCTGCAACCTGCTGATAAGTCTGTTAAAAAACAAAGCAAAAAAAAGAGTTTTTAAA
2481 AATTAGACCACTGTAGCCACAATCCCTAACACTGGACAGTTAAAACAAAAGTTATCAAAATCTGTTCTTTTCTTAGCTTT
2561 ACCTGTATCACTTTATAACTCCTGAGAAAGTCATTCACATAAGCTGTGGCCTCCCCACCTTAACAAAGGGGAAAAAGAAT
2641 ATGTAAAACCACCACAGAATCTTGGCGTAAACTAACATGGGTTTAGTAATACAGAGTACAGTATTCAGGATTTAAGGCAC
2721 CCTTACAAGTCAGAATTGGAAAGTTGGTTTGAGACTTGCAATCTAAAATGACACTGATTTCTGATAAAATTAAATGACTT
2801 TTATTTAGAAAAGTGTGTTTAATAAATTACTTCCTGCTGGTTCAAATGACACACAATCACTTTGTATACATCCAATAAGA
2881 TATTTCTGAAGTGTATACTTGGTCAAAAGTAAAAAGCAGAGCAAATGCATGGACAGTGGGGCCTTCTTCTTAATACTTCT
2961 CATCCTCCAAAATCTGTTAAAATCATCATCTTCCACAACTCACACACTGGAAGCTGTCCACAGCACAATTCACTGTGATG
3041 TGGCATTCTGTAAATAAGACTACATTGGTCTTGATGCAAGGCGGTTCAGCTACCAGACTGCACTATAAGAAAAGTCCTCT
3121 CCTCAACTTACCAAGAAAACTTCGCCAATTTCTAGTCACCTTCCTATCAATTAGTAGAGCAAGATTCTCACATGTTCACT
3201 ATGTCTTTCTCCAGTTTTCTCATCTATAAGTGTACTACTCCTATTTTCTATAGGAAGACAATGGAAAGCGTGTAATTGCT
3281 GTTGGTAGATAAGTAGGTCTTGAATTTATTTTGCAAACAAGACCTGTTCTATCTACCTTTTCATTTAGGAGGCTAAAAGC
3361 AGAGTCAGCTTGATTTCAAGGACTCTATTTTCTTAGTCTCCAGAAGAACATAACCAAATCCAGCTTTTAAAACACTGTCC
3441 TTTAACAAGTCAAGATACTCAAATAAAGATCATGTATAACTTCAAGCTATAGGAGATTAACTCTGTACATATGCTTGTTT
3521 CACTGTAACCAATGGTTAATTAATCTAAATGCAAGAGAAAAGTTATTTGGAAAGAAGACCCCAGCTGGTCAGCATCTTTT
3601 CTGTCATCAGGAAGTCTCCTGGAAGGAGTATGACTATGACCTGGGCACAACAACTGCCCCTAAGTTAGTACTTATTTTAG
3681 AGTTGCTACTGAACAGGTGGTGGTTCTTGTCAAGTATATCATGTCTGACTACTTTACTGCTTGTTTTCTGCTATCACCAG
3761 TTCCAGAAAAAAAAAAAAAAAAAATTAAGCCCAACTCACTAATTGATTGCTTTTTCATTTTCCCAGACTGTGACAGAATC
3841 ATGGTTTTTAGCTCTATTTTCACCTTACTCAAATCCTGGAGGAATTAAACTATCATTTATTTGAAATGTTACAAATTAGC
3921 CTGCAGTTGATTCAAACAACATGTAGTCACTCAGACATAGCAAATAAAAATGTTTTGGTATATAAAAAAAAAAAAAAAAA
4001 AAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuccUCGUUCCGCCGUAGAGa 5'
              ||| :| | ||||||: 
Target 5' ccccAGCTGGTCAGCATCTTt 3'
 3579 - 3599 141.00 -12.00
2 
miRNA  3' uucCUCGUUCCGCCGUAGAga 5'
             || ||:   |||||||  
Target 5' aaaGAACAGAAGGGCATCTgt 3'
 834 - 854 134.00 -11.60
3 
miRNA  3' uucCUCGUUCCGCCGUAGAGa 5'
             || |||| |  |||||| 
Target 5' acaGATCAAGACTCCATCTCa 3'
 1958 - 1978 134.00 -10.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30493894 45 COSMIC
COSN28641247 55 COSMIC
COSN6074154 448 COSMIC
COSN7250603 585 COSMIC
COSN28990345 1207 COSMIC
COSN27441558 1208 COSMIC
COSN23851594 1386 COSMIC
COSN15700084 1430 COSMIC
COSN29124860 1930 COSMIC
COSN27889251 2462 COSMIC
COSN8177333 2632 COSMIC
COSN28966729 2763 COSMIC
COSN30155661 3279 COSMIC
COSN30150869 3282 COSMIC
COSN26976791 3296 COSMIC
COSN13643701 3321 COSMIC
COSN13643699 3490 COSMIC
rs3743102 706 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1223132669 1 dbSNP
rs751612652 2 dbSNP
rs1358245591 8 dbSNP
rs138702546 9 dbSNP
rs758237661 12 dbSNP
rs1387359398 13 dbSNP
rs371581822 16 dbSNP
rs1287584961 17 dbSNP
rs748312699 24 dbSNP
rs766629023 26 dbSNP
rs368352558 30 dbSNP
rs750635394 35 dbSNP
rs1426685426 39 dbSNP
rs1055721400 41 dbSNP
rs767653784 42 dbSNP
rs1289536612 43 dbSNP
rs559405778 45 dbSNP
rs374397158 46 dbSNP
rs781283860 46 dbSNP
rs532163313 54 dbSNP
rs563943895 55 dbSNP
rs1212592018 57 dbSNP
rs150119830 57 dbSNP
rs945839620 58 dbSNP
rs28685273 64 dbSNP
rs892460412 66 dbSNP
rs1252487280 67 dbSNP
rs1437122263 69 dbSNP
rs913001352 77 dbSNP
rs988238962 81 dbSNP
rs939399315 84 dbSNP
rs936848172 87 dbSNP
rs1414543379 91 dbSNP
rs1177867268 98 dbSNP
rs926492079 104 dbSNP
rs925537137 105 dbSNP
rs751566454 108 dbSNP
rs980547857 110 dbSNP
rs941178585 112 dbSNP
rs777940223 115 dbSNP
rs975672240 117 dbSNP
rs909831837 118 dbSNP
rs964378735 125 dbSNP
rs1274771155 135 dbSNP
rs1019636102 139 dbSNP
rs765490463 140 dbSNP
rs1345874988 142 dbSNP
rs1220960410 143 dbSNP
rs1271150482 152 dbSNP
rs987227050 157 dbSNP
rs1400633719 158 dbSNP
rs1204202193 160 dbSNP
rs758501349 162 dbSNP
rs1483898377 173 dbSNP
rs1029701407 183 dbSNP
rs976535077 185 dbSNP
rs1478078763 188 dbSNP
rs1192363790 189 dbSNP
rs1387974117 195 dbSNP
rs1043956414 199 dbSNP
rs942835982 200 dbSNP
rs1372865743 205 dbSNP
rs1403940781 206 dbSNP
rs575070747 208 dbSNP
rs1007762558 210 dbSNP
rs1025743089 212 dbSNP
rs752978619 214 dbSNP
rs995298647 216 dbSNP
rs1229459311 222 dbSNP
rs1300094397 223 dbSNP
rs1344123646 227 dbSNP
rs1207787878 237 dbSNP
rs1022594022 239 dbSNP
rs148135723 241 dbSNP
rs117998650 246 dbSNP
rs879197813 247 dbSNP
rs1422311501 249 dbSNP
rs1034257966 250 dbSNP
rs190410190 251 dbSNP
rs1001485341 253 dbSNP
rs1056840488 272 dbSNP
rs1245472840 275 dbSNP
rs1391571960 281 dbSNP
rs74569644 282 dbSNP
rs1392106561 283 dbSNP
rs1045379935 288 dbSNP
rs939468554 290 dbSNP
rs1388089989 299 dbSNP
rs1260351218 322 dbSNP
rs1435892695 324 dbSNP
rs945715207 325 dbSNP
rs759590332 327 dbSNP
rs905309235 329 dbSNP
rs891510873 336 dbSNP
rs561014353 337 dbSNP
rs759879026 344 dbSNP
rs925483359 352 dbSNP
rs1464059345 353 dbSNP
rs1208733469 356 dbSNP
rs1249538523 358 dbSNP
rs976051623 362 dbSNP
rs1317459605 363 dbSNP
rs942944409 372 dbSNP
rs754249174 374 dbSNP
rs1369444966 377 dbSNP
rs753945548 378 dbSNP
rs1369706309 380 dbSNP
rs1272974980 387 dbSNP
rs1440033917 392 dbSNP
rs1377397909 394 dbSNP
rs912821372 397 dbSNP
rs766836466 398 dbSNP
rs909714165 404 dbSNP
rs761271563 406 dbSNP
rs1322595603 410 dbSNP
rs1463740892 413 dbSNP
rs1400366670 414 dbSNP
rs8023873 416 dbSNP
rs1176230611 425 dbSNP
rs112763598 429 dbSNP
rs761304527 432 dbSNP
rs1423732912 436 dbSNP
rs1286384599 444 dbSNP
rs1133708 453 dbSNP
rs1191155174 471 dbSNP
rs976849815 473 dbSNP
rs760722167 475 dbSNP
rs371469382 476 dbSNP
rs963735756 477 dbSNP
rs1018072663 479 dbSNP
rs978507884 486 dbSNP
rs1486867886 491 dbSNP
rs1180388849 493 dbSNP
rs1240428407 507 dbSNP
rs536980323 516 dbSNP
rs1161978139 530 dbSNP
rs1022437976 543 dbSNP
rs1034205582 545 dbSNP
rs1001792151 555 dbSNP
rs1416421856 561 dbSNP
rs1305900356 563 dbSNP
rs1256793848 586 dbSNP
rs1349624324 593 dbSNP
rs143786103 619 dbSNP
rs892688136 621 dbSNP
rs548035299 633 dbSNP
rs140715773 639 dbSNP
rs1024650142 643 dbSNP
rs146880011 657 dbSNP
rs891497786 659 dbSNP
rs1045166232 668 dbSNP
rs1349554509 672 dbSNP
rs1203485133 684 dbSNP
rs1054120772 686 dbSNP
rs556951295 692 dbSNP
rs999926761 702 dbSNP
rs1311275496 704 dbSNP
rs1483569650 705 dbSNP
rs3743102 706 dbSNP
rs888286200 707 dbSNP
rs1432676121 727 dbSNP
rs1199620981 738 dbSNP
rs1047305998 741 dbSNP
rs929809582 749 dbSNP
rs577603435 764 dbSNP
rs1372218363 772 dbSNP
rs185118171 773 dbSNP
rs1040960252 776 dbSNP
rs1299833202 780 dbSNP
rs1039847013 789 dbSNP
rs1388408991 791 dbSNP
rs942872993 792 dbSNP
rs775466945 795 dbSNP
rs769578024 830 dbSNP
rs745844045 831 dbSNP
rs1051820805 832 dbSNP
rs1372513767 834 dbSNP
rs192972110 840 dbSNP
rs1296413320 850 dbSNP
rs1343390579 853 dbSNP
rs1356952671 862 dbSNP
rs1264233717 866 dbSNP
rs77593712 869 dbSNP
rs968429556 878 dbSNP
rs1420841060 879 dbSNP
rs1188227321 885 dbSNP
rs1390953656 886 dbSNP
rs1428904160 887 dbSNP
rs918617966 889 dbSNP
rs1348077717 896 dbSNP
rs1457393096 897 dbSNP
rs1382693188 901 dbSNP
rs974132646 911 dbSNP
rs1432247566 919 dbSNP
rs561629310 924 dbSNP
rs962764269 925 dbSNP
rs143544747 926 dbSNP
rs1482368415 932 dbSNP
rs927383252 938 dbSNP
rs1321464385 943 dbSNP
rs979924535 949 dbSNP
rs1217432652 954 dbSNP
rs1463608263 959 dbSNP
rs1208115400 965 dbSNP
rs748295394 968 dbSNP
rs1486945112 977 dbSNP
rs1180315801 979 dbSNP
rs1024219337 983 dbSNP
rs1237742437 984 dbSNP
rs1423026307 993 dbSNP
rs375895566 995 dbSNP
rs1419869876 997 dbSNP
rs1455216435 998 dbSNP
rs141234454 1002 dbSNP
rs1229689745 1003 dbSNP
rs545124154 1005 dbSNP
rs1032617103 1026 dbSNP
rs1300706216 1037 dbSNP
rs1035712114 1043 dbSNP
rs1396911323 1050 dbSNP
rs576010344 1052 dbSNP
rs999833656 1054 dbSNP
rs900229240 1055 dbSNP
rs1039198978 1071 dbSNP
rs556176947 1072 dbSNP
rs1318781861 1076 dbSNP
rs11635357 1080 dbSNP
rs1237107939 1094 dbSNP
rs1482813012 1096 dbSNP
rs1400064168 1098 dbSNP
rs1023557299 1105 dbSNP
rs1471597395 1107 dbSNP
rs1363056901 1111 dbSNP
rs1408163224 1112 dbSNP
rs1296849054 1116 dbSNP
rs891320366 1118 dbSNP
rs534382626 1127 dbSNP
rs1358143007 1134 dbSNP
rs930233532 1136 dbSNP
rs918858682 1138 dbSNP
rs187878655 1139 dbSNP
rs1315123364 1140 dbSNP
rs888506994 1141 dbSNP
rs1038350281 1147 dbSNP
rs534491879 1152 dbSNP
rs1417400947 1155 dbSNP
rs145233734 1157 dbSNP
rs1041362365 1158 dbSNP
rs1312941679 1171 dbSNP
rs980632004 1180 dbSNP
rs1213257799 1186 dbSNP
rs1282252431 1189 dbSNP
rs942562558 1202 dbSNP
rs1181434185 1207 dbSNP
rs949902440 1212 dbSNP
rs1470880580 1215 dbSNP
rs1188905661 1218 dbSNP
rs910905983 1219 dbSNP
rs947018430 1219 dbSNP
rs1369170232 1220 dbSNP
rs913000730 1220 dbSNP
rs988568318 1225 dbSNP
rs957129885 1240 dbSNP
rs756520984 1241 dbSNP
rs982778929 1244 dbSNP
rs969583236 1248 dbSNP
rs551972762 1249 dbSNP
rs1295658003 1256 dbSNP
rs1339816703 1261 dbSNP
rs955928391 1263 dbSNP
rs538779901 1268 dbSNP
rs1319611176 1272 dbSNP
rs1292266490 1273 dbSNP
rs368363916 1276 dbSNP
rs1032901254 1277 dbSNP
rs150004358 1278 dbSNP
rs1245668277 1283 dbSNP
rs1468538850 1286 dbSNP
rs1195175571 1289 dbSNP
rs1275698669 1293 dbSNP
rs139325478 1298 dbSNP
rs1168814550 1300 dbSNP
rs376358659 1301 dbSNP
rs1295717411 1303 dbSNP
rs1404136967 1304 dbSNP
rs1009091650 1305 dbSNP
rs561386850 1321 dbSNP
rs1394079046 1322 dbSNP
rs901011929 1330 dbSNP
rs548091663 1331 dbSNP
rs1171693413 1339 dbSNP
rs1478897718 1341 dbSNP
rs1019416734 1345 dbSNP
rs1030218635 1346 dbSNP
rs1192476925 1351 dbSNP
rs1226447237 1351 dbSNP
rs1427916849 1355 dbSNP
rs1226606341 1363 dbSNP
rs1289049973 1369 dbSNP
rs60520444 1373 dbSNP
rs1214941948 1375 dbSNP
rs1211464274 1382 dbSNP
rs897378169 1383 dbSNP
rs1464125297 1396 dbSNP
rs565506602 1407 dbSNP
rs530221646 1408 dbSNP
rs1272264407 1412 dbSNP
rs1163203892 1423 dbSNP
rs1042980957 1428 dbSNP
rs767974652 1435 dbSNP
rs1198901308 1438 dbSNP
rs1156968197 1446 dbSNP
rs1430139074 1446 dbSNP
rs947068913 1446 dbSNP
rs1320533041 1449 dbSNP
rs28534460 1455 dbSNP
rs905888565 1457 dbSNP
rs142617615 1459 dbSNP
rs1335352953 1461 dbSNP
rs1234620656 1468 dbSNP
rs938409825 1472 dbSNP
rs950155569 1473 dbSNP
rs917354610 1488 dbSNP
rs1285844539 1489 dbSNP
rs562654093 1490 dbSNP
rs1441051025 1496 dbSNP
rs183856809 1497 dbSNP
rs1385556414 1498 dbSNP
rs1476499549 1503 dbSNP
rs982221175 1504 dbSNP
rs1411415872 1512 dbSNP
rs1454367011 1514 dbSNP
rs1370746400 1515 dbSNP
rs550556892 1523 dbSNP
rs1412577792 1524 dbSNP
rs1311996464 1526 dbSNP
rs747536964 1551 dbSNP
rs925871340 1562 dbSNP
rs952826062 1573 dbSNP
rs762725540 1575 dbSNP
rs139720051 1581 dbSNP
rs1262152884 1582 dbSNP
rs1466595366 1598 dbSNP
rs1342372162 1599 dbSNP
rs1378171085 1599 dbSNP
rs554547188 1617 dbSNP
rs965469677 1624 dbSNP
rs1020100563 1626 dbSNP
rs1006758181 1635 dbSNP
rs889614406 1642 dbSNP
rs1250365895 1645 dbSNP
rs1017709965 1646 dbSNP
rs775381043 1647 dbSNP
rs866513117 1656 dbSNP
rs1026076405 1665 dbSNP
rs147434622 1668 dbSNP
rs1252157158 1682 dbSNP
rs1477852358 1685 dbSNP
rs897365462 1685 dbSNP
rs1375899088 1686 dbSNP
rs565452436 1690 dbSNP
rs1017189223 1695 dbSNP
rs1006241529 1696 dbSNP
rs1179022433 1697 dbSNP
rs891460999 1700 dbSNP
rs1308574346 1712 dbSNP
rs564898772 1713 dbSNP
rs938448380 1714 dbSNP
rs906974639 1716 dbSNP
rs1044762629 1717 dbSNP
rs950088709 1718 dbSNP
rs191269230 1720 dbSNP
rs1251274139 1721 dbSNP
rs373370101 1724 dbSNP
rs1198054121 1725 dbSNP
rs571190228 1726 dbSNP
rs368138637 1727 dbSNP
rs1042934206 1728 dbSNP
rs943255275 1736 dbSNP
rs569725320 1737 dbSNP
rs1166425743 1738 dbSNP
rs1310537170 1742 dbSNP
rs987508723 1757 dbSNP
rs187910010 1758 dbSNP
rs142681630 1759 dbSNP
rs201905461 1760 dbSNP
rs1226678632 1763 dbSNP
rs547753873 1765 dbSNP
rs1404465119 1767 dbSNP
rs1230329813 1768 dbSNP
rs1170832000 1769 dbSNP
rs1334260570 1770 dbSNP
rs961519949 1772 dbSNP
rs1019743357 1773 dbSNP
rs1017092466 1778 dbSNP
rs953859927 1780 dbSNP
rs183538934 1781 dbSNP
rs1260857382 1786 dbSNP
rs1441283571 1792 dbSNP
rs970681831 1794 dbSNP
rs867070690 1795 dbSNP
rs1396006482 1797 dbSNP
rs1432502519 1799 dbSNP
rs1287921306 1800 dbSNP
rs1014670296 1802 dbSNP
rs1384208770 1803 dbSNP
rs565332862 1804 dbSNP
rs1355329206 1805 dbSNP
rs1044128699 1806 dbSNP
rs1012587404 1807 dbSNP
rs895331090 1809 dbSNP
rs778991981 1812 dbSNP
rs551520820 1814 dbSNP
rs1188008435 1815 dbSNP
rs1255352355 1816 dbSNP
rs1474868658 1819 dbSNP
rs1419476556 1822 dbSNP
rs1224915763 1824 dbSNP
rs904633148 1825 dbSNP
rs879609595 1826 dbSNP
rs943222454 1832 dbSNP
rs910421342 1838 dbSNP
rs755220586 1839 dbSNP
rs562836364 1844 dbSNP
rs1345374589 1850 dbSNP
rs1455694681 1850 dbSNP
rs372903735 1850 dbSNP
rs1349019735 1851 dbSNP
rs1355187167 1853 dbSNP
rs932971703 1855 dbSNP
rs1245810281 1856 dbSNP
rs1223228821 1857 dbSNP
rs1342483919 1859 dbSNP
rs1332346348 1860 dbSNP
rs59593645 1865 dbSNP
rs971743050 1867 dbSNP
rs562617168 1868 dbSNP
rs542743709 1869 dbSNP
rs984657306 1870 dbSNP
rs1157714229 1871 dbSNP
rs1176076482 1872 dbSNP
rs1408045998 1873 dbSNP
rs573936294 1877 dbSNP
rs1023633115 1886 dbSNP
rs914427019 1888 dbSNP
rs560575918 1891 dbSNP
rs1315360782 1892 dbSNP
rs1185221076 1897 dbSNP
rs960014575 1899 dbSNP
rs1441595901 1902 dbSNP
rs1298868652 1904 dbSNP
rs1375589820 1906 dbSNP
rs1474576154 1907 dbSNP
rs1217760987 1910 dbSNP
rs193070046 1915 dbSNP
rs998822404 1916 dbSNP
rs904579402 1923 dbSNP
rs1043148457 1924 dbSNP
rs1003166071 1929 dbSNP
rs1203695927 1930 dbSNP
rs1233020591 1931 dbSNP
rs1210799519 1932 dbSNP
rs1007802582 1936 dbSNP
rs888987708 1938 dbSNP
rs188765302 1947 dbSNP
rs530620536 1948 dbSNP
rs868129482 1953 dbSNP
rs1417785201 1954 dbSNP
rs1035996379 1959 dbSNP
rs1330145952 1966 dbSNP
rs1012641384 1972 dbSNP
rs1048786458 1973 dbSNP
rs1401773591 1973 dbSNP
rs1343360761 1975 dbSNP
rs1340998737 1977 dbSNP
rs1452606027 1978 dbSNP
rs60128866 1978 dbSNP
rs1491071403 1979 dbSNP
rs941680727 1980 dbSNP
rs1392481506 1990 dbSNP
rs1443346524 1994 dbSNP
rs1276434675 1996 dbSNP
rs1259275725 1997 dbSNP
rs1272825431 1997 dbSNP
rs71455423 1997 dbSNP
rs756694991 1997 dbSNP
rs773535091 1997 dbSNP
rs1162384067 1998 dbSNP
rs1252016093 1998 dbSNP
rs1474647052 2000 dbSNP
rs1468682511 2001 dbSNP
rs545187967 2015 dbSNP
rs995725894 2016 dbSNP
rs1240792437 2018 dbSNP
rs1423733695 2023 dbSNP
rs756201557 2026 dbSNP
rs1169014772 2032 dbSNP
rs1422218809 2038 dbSNP
rs908961257 2047 dbSNP
rs576326238 2052 dbSNP
rs1164360985 2057 dbSNP
rs1395264246 2060 dbSNP
rs980582507 2070 dbSNP
rs948890546 2075 dbSNP
rs916107510 2079 dbSNP
rs993420722 2084 dbSNP
rs183316244 2091 dbSNP
rs563416213 2094 dbSNP
rs1231356689 2098 dbSNP
rs977351147 2099 dbSNP
rs1334917816 2106 dbSNP
rs1215243932 2107 dbSNP
rs1281632705 2108 dbSNP
rs1049733994 2112 dbSNP
rs932620301 2113 dbSNP
rs914688298 2114 dbSNP
rs990631517 2121 dbSNP
rs968729129 2124 dbSNP
rs1418740121 2126 dbSNP
rs1260153624 2136 dbSNP
rs28677018 2138 dbSNP
rs750809601 2139 dbSNP
rs1384474756 2140 dbSNP
rs1399919369 2142 dbSNP
rs888927764 2143 dbSNP
rs1318782790 2166 dbSNP
rs768047924 2172 dbSNP
rs1412931577 2173 dbSNP
rs1292589865 2174 dbSNP
rs997358147 2175 dbSNP
rs971264397 2180 dbSNP
rs567138590 2184 dbSNP
rs1323574665 2196 dbSNP
rs1205319424 2212 dbSNP
rs1288679925 2221 dbSNP
rs1128452 2224 dbSNP
rs553774440 2225 dbSNP
rs1128451 2226 dbSNP
rs991147189 2229 dbSNP
rs80259167 2230 dbSNP
rs1179693596 2235 dbSNP
rs761572701 2241 dbSNP
rs1363282613 2252 dbSNP
rs1470658312 2255 dbSNP
rs941670994 2262 dbSNP
rs1407684498 2269 dbSNP
rs887481030 2276 dbSNP
rs1399105433 2278 dbSNP
rs553375413 2280 dbSNP
rs993611743 2290 dbSNP
rs751074495 2296 dbSNP
rs1045198740 2299 dbSNP
rs1326323320 2300 dbSNP
rs1334652531 2302 dbSNP
rs1016145862 2314 dbSNP
rs1310920691 2317 dbSNP
rs1233968741 2319 dbSNP
rs774178589 2322 dbSNP
rs1281693638 2324 dbSNP
rs143893126 2327 dbSNP
rs891407229 2328 dbSNP
rs1049992088 2331 dbSNP
rs932672841 2345 dbSNP
rs1202572585 2363 dbSNP
rs762625637 2366 dbSNP
rs775074743 2370 dbSNP
rs917669009 2373 dbSNP
rs1452378499 2376 dbSNP
rs1172734587 2378 dbSNP
rs1279358703 2387 dbSNP
rs1395420121 2388 dbSNP
rs762641323 2391 dbSNP
rs992920048 2392 dbSNP
rs934712376 2397 dbSNP
rs938854089 2401 dbSNP
rs1301061149 2416 dbSNP
rs1439868359 2421 dbSNP
rs1377236983 2425 dbSNP
rs1332985020 2426 dbSNP
rs924863115 2431 dbSNP
rs924487745 2432 dbSNP
rs551681844 2436 dbSNP
rs531769991 2439 dbSNP
rs981707657 2441 dbSNP
rs1439512829 2445 dbSNP
rs949877072 2447 dbSNP
rs1353430169 2456 dbSNP
rs1176070936 2460 dbSNP
rs1416718275 2461 dbSNP
rs1251191927 2465 dbSNP
rs1340164210 2467 dbSNP
rs1393795391 2469 dbSNP
rs915865032 2470 dbSNP
rs770022912 2473 dbSNP
rs968677030 2482 dbSNP
rs1173458334 2485 dbSNP
rs1267861588 2492 dbSNP
rs1021650336 2493 dbSNP
rs1434626916 2496 dbSNP
rs991364988 2509 dbSNP
rs986550753 2515 dbSNP
rs769308659 2523 dbSNP
rs1030835606 2528 dbSNP
rs1372389229 2534 dbSNP
rs951716332 2535 dbSNP
rs997348332 2536 dbSNP
rs961908587 2544 dbSNP
rs1027698723 2555 dbSNP
rs1382512619 2558 dbSNP
rs1326152736 2560 dbSNP
rs1370200506 2571 dbSNP
rs971850343 2572 dbSNP
rs962075480 2576 dbSNP
rs1327483182 2584 dbSNP
rs1014838513 2592 dbSNP
rs1271418987 2598 dbSNP
rs1006168684 2599 dbSNP
rs1480395094 2603 dbSNP
rs1238125089 2609 dbSNP
rs1267385038 2613 dbSNP
rs577743515 2618 dbSNP
rs1486643275 2625 dbSNP
rs1260746754 2628 dbSNP
rs1478130721 2634 dbSNP
rs1278066064 2637 dbSNP
rs1195750524 2638 dbSNP
rs1008429463 2639 dbSNP
rs1233426265 2643 dbSNP
rs1474562043 2655 dbSNP
rs891291111 2665 dbSNP
rs1044705697 2666 dbSNP
rs1354183593 2667 dbSNP
rs1308806642 2669 dbSNP
rs77081252 2675 dbSNP
rs893150841 2677 dbSNP
rs1402458117 2679 dbSNP
rs1302982158 2686 dbSNP
rs1354902212 2692 dbSNP
rs1233931397 2693 dbSNP
rs1315135526 2694 dbSNP
rs373486774 2695 dbSNP
rs896196385 2700 dbSNP
rs934661458 2703 dbSNP
rs1374211400 2705 dbSNP
rs549056694 2706 dbSNP
rs903298483 2718 dbSNP
rs529436961 2720 dbSNP
rs1485079054 2721 dbSNP
rs1045810628 2732 dbSNP
rs1056179520 2736 dbSNP
rs1420788509 2737 dbSNP
rs1347327195 2744 dbSNP
rs776327839 2746 dbSNP
rs924809333 2747 dbSNP
rs1041933940 2756 dbSNP
rs1414778737 2762 dbSNP
rs1375322363 2772 dbSNP
rs560387139 2781 dbSNP
rs1304700514 2785 dbSNP
rs12915384 2786 dbSNP
rs1223492472 2795 dbSNP
rs1307906528 2796 dbSNP
rs533186609 2801 dbSNP
rs1256841500 2802 dbSNP
rs1242003432 2807 dbSNP
rs748501948 2810 dbSNP
rs1210097224 2811 dbSNP
rs914817200 2815 dbSNP
rs1210692810 2819 dbSNP
rs920289774 2830 dbSNP
rs1213372214 2834 dbSNP
rs1479337219 2836 dbSNP
rs986109827 2839 dbSNP
rs953543629 2841 dbSNP
rs1316020999 2846 dbSNP
rs1176267357 2852 dbSNP
rs1312947893 2854 dbSNP
rs1441953893 2867 dbSNP
rs923374212 2868 dbSNP
rs565149044 2875 dbSNP
rs976195552 2877 dbSNP
rs961723755 2892 dbSNP
rs1401144780 2898 dbSNP
rs545349864 2919 dbSNP
rs1352850511 2927 dbSNP
rs1441485539 2930 dbSNP
rs987216239 2934 dbSNP
rs34579350 2944 dbSNP
rs35784592 2946 dbSNP
rs1287544052 2948 dbSNP
rs71970395 2952 dbSNP
rs1438959158 2956 dbSNP
rs1028467067 2963 dbSNP
rs1014744598 2965 dbSNP
rs1167402990 2991 dbSNP
rs1219750426 2991 dbSNP
rs1460023434 2994 dbSNP
rs1280557255 2998 dbSNP
rs1417260215 2999 dbSNP
rs1203146608 3003 dbSNP
rs1258115421 3008 dbSNP
rs1006073784 3016 dbSNP
rs191473995 3017 dbSNP
rs1252828176 3018 dbSNP
rs760625017 3020 dbSNP
rs1023973391 3028 dbSNP
rs1011911033 3035 dbSNP
rs1243156244 3038 dbSNP
rs997120811 3040 dbSNP
rs1417944024 3052 dbSNP
rs896173841 3055 dbSNP
rs1056126958 3060 dbSNP
rs1429109795 3063 dbSNP
rs1263737542 3065 dbSNP
rs138007198 3067 dbSNP
rs902290248 3069 dbSNP
rs865921735 3072 dbSNP
rs370948453 3082 dbSNP
rs1041835383 3083 dbSNP
rs1045798121 3084 dbSNP
rs1014257691 3089 dbSNP
rs1213886868 3090 dbSNP
rs1278352186 3105 dbSNP
rs1332123015 3110 dbSNP
rs542353784 3115 dbSNP
rs774353423 3119 dbSNP
rs185300347 3126 dbSNP
rs894323699 3127 dbSNP
rs1055527082 3132 dbSNP
rs930473632 3133 dbSNP
rs1328754504 3140 dbSNP
rs920537053 3143 dbSNP
rs553602721 3145 dbSNP
rs533756108 3148 dbSNP
rs1474226632 3150 dbSNP
rs1164515126 3154 dbSNP
rs1391660690 3157 dbSNP
rs1407269344 3160 dbSNP
rs940388135 3166 dbSNP
rs923291527 3176 dbSNP
rs976101854 3177 dbSNP
rs1399390443 3183 dbSNP
rs150443848 3197 dbSNP
rs1341840156 3199 dbSNP
rs1230885316 3202 dbSNP
rs1328270029 3203 dbSNP
rs907964791 3223 dbSNP
rs758223379 3226 dbSNP
rs774884678 3231 dbSNP
rs370325422 3232 dbSNP
rs755070067 3234 dbSNP
rs375977679 3236 dbSNP
rs1202735988 3238 dbSNP
rs775646617 3240 dbSNP
rs751655142 3243 dbSNP
rs1234275813 3245 dbSNP
rs921661275 3251 dbSNP
rs1293576103 3254 dbSNP
rs558015719 3257 dbSNP
rs778888781 3262 dbSNP
rs745565214 3264 dbSNP
rs1265920131 3265 dbSNP
rs780986174 3269 dbSNP
rs770604338 3270 dbSNP
rs746470745 3271 dbSNP
rs757138716 3271 dbSNP
rs1473934946 3272 dbSNP
rs1157032552 3274 dbSNP
rs1408787871 3279 dbSNP
rs538187875 3286 dbSNP
rs1466267462 3289 dbSNP
rs1177354602 3296 dbSNP
rs1362330123 3301 dbSNP
rs1371993239 3302 dbSNP
rs1167778046 3306 dbSNP
rs758202597 3314 dbSNP
rs1390642627 3316 dbSNP
rs753804682 3318 dbSNP
rs140669359 3320 dbSNP
rs752551148 3321 dbSNP
rs1258072386 3322 dbSNP
rs778634817 3340 dbSNP
rs1332979276 3342 dbSNP
rs1340548684 3344 dbSNP
rs750257418 3349 dbSNP
rs1223485951 3352 dbSNP
rs750686216 3353 dbSNP
rs1468780372 3361 dbSNP
rs767707150 3365 dbSNP
rs1207297146 3367 dbSNP
rs761900571 3370 dbSNP
rs28405933 3385 dbSNP
rs751596635 3388 dbSNP
rs764663368 3396 dbSNP
rs763306909 3397 dbSNP
rs776052437 3398 dbSNP
rs1277353787 3400 dbSNP
rs73443066 3404 dbSNP
rs1241262145 3406 dbSNP
rs759947441 3407 dbSNP
rs376767324 3409 dbSNP
rs991172951 3420 dbSNP
rs1296101541 3422 dbSNP
rs377067800 3433 dbSNP
rs573491034 3434 dbSNP
rs1370660207 3436 dbSNP
rs373369280 3441 dbSNP
rs746522158 3449 dbSNP
rs1369976972 3450 dbSNP
rs1200381573 3473 dbSNP
rs1014310035 3474 dbSNP
rs1444144712 3476 dbSNP
rs867946829 3483 dbSNP
rs879114976 3485 dbSNP
rs1232478343 3490 dbSNP
rs796835329 3496 dbSNP
rs1438879500 3504 dbSNP
rs1034624782 3507 dbSNP
rs78817626 3529 dbSNP
rs902232792 3533 dbSNP
rs1306161947 3535 dbSNP
rs1381906405 3536 dbSNP
rs1432861231 3544 dbSNP
rs879237156 3548 dbSNP
rs1171918420 3554 dbSNP
rs769961039 3555 dbSNP
rs1402318076 3557 dbSNP
rs546799998 3558 dbSNP
rs533338215 3562 dbSNP
rs893323677 3563 dbSNP
rs1375752502 3569 dbSNP
rs1232524926 3579 dbSNP
rs1447020272 3580 dbSNP
rs755341520 3583 dbSNP
rs1312002405 3588 dbSNP
rs1369218343 3599 dbSNP
rs564505986 3620 dbSNP
rs1233175019 3628 dbSNP
rs1257032289 3630 dbSNP
rs1347259263 3631 dbSNP
rs536897037 3636 dbSNP
rs545311878 3637 dbSNP
rs1370586149 3648 dbSNP
rs1180742021 3654 dbSNP
rs1239843169 3656 dbSNP
rs865989492 3664 dbSNP
rs1452280846 3666 dbSNP
rs1198088436 3672 dbSNP
rs1036691041 3679 dbSNP
rs1467499013 3683 dbSNP
rs749529933 3686 dbSNP
rs1165689534 3690 dbSNP
rs932203810 3697 dbSNP
rs1393309295 3706 dbSNP
rs940583900 3708 dbSNP
rs1332887252 3709 dbSNP
rs1392744277 3711 dbSNP
rs182205240 3719 dbSNP
rs902112171 3720 dbSNP
rs1302615302 3722 dbSNP
rs911578944 3727 dbSNP
rs1225838393 3731 dbSNP
rs868670201 3733 dbSNP
rs138998098 3739 dbSNP
rs1318684655 3743 dbSNP
rs1200776532 3754 dbSNP
rs1033320336 3756 dbSNP
rs557653693 3758 dbSNP
rs1273534327 3764 dbSNP
rs1395595633 3765 dbSNP
rs1003191218 3766 dbSNP
rs1040366907 3767 dbSNP
rs1267746435 3767 dbSNP
rs1191398845 3782 dbSNP
rs1452305252 3783 dbSNP
rs1394201787 3784 dbSNP
rs1172412658 3785 dbSNP
rs1422305857 3785 dbSNP
rs34034203 3785 dbSNP
rs71455422 3785 dbSNP
rs878862646 3785 dbSNP
rs931624357 3785 dbSNP
rs940673444 3785 dbSNP
rs1298066247 3800 dbSNP
rs1341219534 3803 dbSNP
rs1220507866 3809 dbSNP
rs1291484092 3810 dbSNP
rs907954021 3820 dbSNP
rs1245785740 3823 dbSNP
rs1182100474 3838 dbSNP
rs1489305709 3840 dbSNP
rs145175403 3842 dbSNP
rs1262338670 3847 dbSNP
rs1247892726 3868 dbSNP
rs930478792 3869 dbSNP
rs916422556 3875 dbSNP
rs1410952544 3876 dbSNP
rs990686472 3884 dbSNP
rs936172774 3899 dbSNP
rs1165024719 3903 dbSNP
rs1370579414 3914 dbSNP
rs1486313768 3918 dbSNP
rs1418187622 3919 dbSNP
rs1158611302 3937 dbSNP
rs960582710 3939 dbSNP
rs1361787039 3940 dbSNP
rs1034903341 3941 dbSNP
rs1311207652 3942 dbSNP
rs1378511090 3943 dbSNP
rs977725671 3944 dbSNP
rs1396839174 3950 dbSNP
rs1315026552 3953 dbSNP
rs201410244 3957 dbSNP
rs1237630294 3958 dbSNP
rs1285017394 3965 dbSNP
rs966384317 3967 dbSNP
rs978088642 3969 dbSNP
rs1218700955 3972 dbSNP
rs189887883 3979 dbSNP
rs967629856 3981 dbSNP
rs1482613135 3985 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uucCUCGUUCCGCCGUAGAGa 5'
             || |||| |  |||||| 
Target 5' --aGAUCAAGACUCCAUCUCa 3'
 		1 - 19
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000334574.8 | 3UTR | AGAUCAAGACUCCAUCUCAAAAAAAAAAAAAAAAAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
94 hsa-miR-4708-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT095681 RBM27 RNA binding motif protein 27 2 4
MIRT104033 USP42 ubiquitin specific peptidase 42 2 6
MIRT114773 CMPK1 cytidine/uridine monophosphate kinase 1 2 2
MIRT246923 CCND1 cyclin D1 2 2
MIRT392569 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT443949 LRIT3 leucine rich repeat, Ig-like and transmembrane domains 3 2 2
MIRT446695 PAPPA pappalysin 1 2 2
MIRT447383 VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 2 2
MIRT449321 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT449717 C1orf61 chromosome 1 open reading frame 61 2 2
MIRT449738 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 2 2
MIRT450531 PGLS 6-phosphogluconolactonase 2 2
MIRT455650 YARS tyrosyl-tRNA synthetase 2 2
MIRT458036 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT463468 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT466677 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 2 4
MIRT467789 SLC2A14 solute carrier family 2 member 14 2 2
MIRT468167 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT468652 SECISBP2L SECIS binding protein 2 like 2 6
MIRT469380 RER1 retention in endoplasmic reticulum sorting receptor 1 2 2
MIRT470346 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT472418 NCKAP1 NCK associated protein 1 2 2
MIRT474612 KLF3 Kruppel like factor 3 2 2
MIRT478703 CSRNP2 cysteine and serine rich nuclear protein 2 2 2
MIRT481008 BBC3 BCL2 binding component 3 2 4
MIRT483098 TFPI tissue factor pathway inhibitor 2 2
MIRT485113 SHISA6 shisa family member 6 2 2
MIRT497533 ZNF607 zinc finger protein 607 2 2
MIRT500644 TUBB2A tubulin beta 2A class IIa 2 6
MIRT500890 STRN striatin 2 4
MIRT501900 MED13 mediator complex subunit 13 2 2
MIRT506646 MAPK1 mitogen-activated protein kinase 1 2 4
MIRT512675 ENO4 enolase family member 4 2 2
MIRT516977 OR7D2 olfactory receptor family 7 subfamily D member 2 2 2
MIRT528754 RPS27 ribosomal protein S27 2 6
MIRT539670 ZBTB44 zinc finger and BTB domain containing 44 2 2
MIRT544129 PPIL1 peptidylprolyl isomerase like 1 2 2
MIRT546382 STOX2 storkhead box 2 2 4
MIRT562143 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT568713 TMEM30B transmembrane protein 30B 2 2
MIRT571029 CENPP centromere protein P 2 2
MIRT572781 ZNF277 zinc finger protein 277 2 2
MIRT573162 SLC30A9 solute carrier family 30 member 9 2 2
MIRT609126 NUDT3 nudix hydrolase 3 2 2
MIRT609284 OAS3 2'-5'-oligoadenylate synthetase 3 2 2
MIRT613430 GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 2 2
MIRT613770 TTC38 tetratricopeptide repeat domain 38 2 2
MIRT616645 LRAT lecithin retinol acyltransferase 2 4
MIRT630892 SLC25A33 solute carrier family 25 member 33 2 2
MIRT636526 FAXC failed axon connections homolog 2 4
MIRT641394 NUBPL nucleotide binding protein like 2 2
MIRT641412 SCN2B sodium voltage-gated channel beta subunit 2 2 2
MIRT642528 CERS4 ceramide synthase 4 2 2
MIRT643186 HYPK huntingtin interacting protein K 2 2
MIRT647800 FRMD8 FERM domain containing 8 2 2
MIRT652150 TRIM71 tripartite motif containing 71 2 2
MIRT652602 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT661606 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT666339 SKAP2 src kinase associated phosphoprotein 2 2 2
MIRT670414 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT671122 ZNF573 zinc finger protein 573 2 2
MIRT671155 ANKRD9 ankyrin repeat domain 9 2 2
MIRT671338 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT671869 ZNF429 zinc finger protein 429 2 2
MIRT671974 IKZF3 IKAROS family zinc finger 3 2 2
MIRT672064 KIAA0930 KIAA0930 2 2
MIRT672654 SLC25A16 solute carrier family 25 member 16 2 4
MIRT672673 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT672771 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672929 LRRC2 leucine rich repeat containing 2 2 2
MIRT673159 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673272 RUNDC1 RUN domain containing 1 2 2
MIRT673332 THAP1 THAP domain containing 1 2 2
MIRT673351 SLC35F6 solute carrier family 35 member F6 2 2
MIRT673667 ZNF440 zinc finger protein 440 2 2
MIRT673904 DCTN6 dynactin subunit 6 2 2
MIRT674096 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674401 MYCBP MYC binding protein 2 2
MIRT674525 PRR23A proline rich 23A 2 2
MIRT674793 NPR1 natriuretic peptide receptor 1 2 2
MIRT674833 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 2
MIRT675066 FGD6 FYVE, RhoGEF and PH domain containing 6 2 2
MIRT675080 CCR6 C-C motif chemokine receptor 6 2 2
MIRT675126 FSD2 fibronectin type III and SPRY domain containing 2 2 2
MIRT679401 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT689229 RPS19 ribosomal protein S19 2 2
MIRT694008 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT699671 SFT2D2 SFT2 domain containing 2 2 2
MIRT706213 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT706548 GJD2 gap junction protein delta 2 2 2
MIRT707418 RRP7A ribosomal RNA processing 7 homolog A 2 2
MIRT710648 GLUL glutamate-ammonia ligase 2 2
MIRT719393 NPCA1 Nasopharyngeal carcinoma 1 2 2
MIRT720166 PNPO pyridoxamine 5'-phosphate oxidase 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4708-5p Fulvestrant 17756771 NSC719276 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-4708-5p Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-4708-5p Tripterygium wilfordii Hook F sensitive tissue
hsa-miR-4708-5p Cisplatin 5460033 NSC119875 approved sensitive cell line
hsa-miR-4708-5p Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4708-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

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