pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ATP1B4   
Synonyms -
Description ATPase Na+/K+ transporting family member beta 4
Transcript NM_001142447   
Other Transcripts NM_012069   
Expression
Putative miRNA Targets on ATP1B4
3'UTR of ATP1B4
(miRNA target sites are highlighted)
>ATP1B4|NM_001142447|3'UTR
   1 GAACTTCAGGGGGCCATTCTTACCAGTTCTGTTTCTGTTTTATCTCATGGTATCTCTGGTAGCACCTGAATTCTTTTTCT
  81 TCAATTAGGACACAGCCAGATGGACATCTAAGACAGCCGATCATCTTTCCTTGCCTATGACATGTGTATAAAATGACATT
 161 GTGGGAGCTGTTCGATTTTTTAAAGGTAGTGTCTCCTGATGACAAACAGAGTATATTAATTTCCTTTCCCTCCACTTAAA
 241 ACTAAAGCCTGTTCTTGCTGCTGGTAATCTCCCTGTAGCGTAAACATAGTATCTGATAAAATTTACAATAGCCACGCAAT
 321 AGCCATCAAGGAGAATTTCTATTATGATTATAAATTCATCATGTTTTCTAAAATTCTGTTGGTTTTAGAGGTCAGATTCC
 401 TCCCAACCAGGCTAATAACCTAACACATGTTTAAAAAAAATCTGCCTAAGCCGGGTGTGGTGGCATGCATCTGTAGTCCC
 481 ACCTATTCAGGAGATTAAGGCAGGAGGATCACTTGAGCCCAGGAGGTCAAGGCTGCAGTGAGCTGCACTGCATTCCAGCC
 561 TGGGTGACAGAGTGAGATCCTGTCTCTGAAGAAAAAAAAAACCTGCCTGGCAAGGTCCTTCCCTGGGAATCACCACTCGG
 641 TCCAACCTAGACAACCAAGACCGCTATACCTAAAGACCTCTATATCCTGGTGCCTAAGAAACTTCTGCCTCCCACAGACA
 721 ACTAAGTGCTTATTCAAAGACTAGGTTATTTTCAACTGGGAAAAAAGCAGTGCTAACAGGATATTGTTCTGGGATAGAGA
 801 TGAAGACCGTCCTTGTGACTTTTTAAAGAGGTGGGGCTCACTGCAACTGGGGAGAACACTTAGCATATGGATATGATTGG
 881 TGTTTGATTCCTTGCTCTCTGGTGTAATCGTCTAAAGGCAAACATTCCTGCAAACAGGTTTTTCTCAGCTTCAGGCAGAG
 961 GAGACAACATGGAAGAAGATTCCCACCAGCTAATTCTTCTTGGGCTATTTGTTTGACAGTAGCATGATGTTTTTTGAGAC
1041 CATCAGGGGTGGTTACATAGACCAGCAGCTACAGCTCTGGAAATTGAAATCATAATCTGTCAATGAATACATGACAAGAC
1121 AGAACGTTCCTTGCCAGGCCAGGCAAAAGCCAAGGCCCATTAGCCAGTTTAGCATTTACTTTAAAAATGACATGAGGCAG
1201 ATTCTTATCCAGGATGTGGATCAGCCAGGTCACTTTGTCTTATCTTTGGTCACCTGATCACTCAACTGCTTCTTAACACC
1281 TCCACCAGGGGGAAGGCTGGCACAAGGAGAAAAAAAAAGCAAGCATCAGCGAATAGTATAGTGTCTCAGGGTCCGAAGCA
1361 AGTTTAAATGCCACCTAGGAGGATCCAAAGTCTGAATCTCCTCTACAATGTTTCCTTTCTCCCAAAACAGGGAACTGACT
1441 GTCTGGTAGTGAAGACAAGCAAGTGGAGAAGTTATACGATATAGTTTAATGAGAGTTAAAAAACTAGTATGTGGAAAGCT
1521 ATGGGAATATGAGGAAAAATATCTTGAGCTAAGAAAGTAGCAGAGGAAATTTCACATGCAAAGCCACAGTCATGAAGAGA
1601 CCATGGTGTGTCTGGGTAACTGTGAGCAGTTTATGTAACTGGAATGAAAAGGGCTCAGAGGAATGGCAGGGATGGCAAGA
1681 GATCCAGCTAGAGAGGTATTCAGGGATGGAAAGAGGACTTTGAGTTTTATCCAATAGGTGAAAATGAGTAATTAAAGCAT
1761 TTTAATCAGGGAGGCTCTGTGATCACATTTGTGTTTTATTTTATTTTACTTTATTATTTATTTGTTTATTTTTGAGATGG
1841 AGTTTCGCTGTTGTCACCCAGGCTGGAGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCCACCTCCCGGATTCAAGTG
1921 ATTCTCCAGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACACACCACCATGCCCAGCTAACTTTTGTATTTTTGGCG
2001 GAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCGCCTGCCTCAGCCTCCCACAG
2081 TGCTGGGATTACAGGCGTGAGCCACCGCACCCGGCTTGCAATTTAGAAAGGGCACTTGGCAACCACTATGTGAAGGGTGA
2161 TTGGAGAAGGACAAGACTGTGGAATGGGGAATAAGGAAGGAGGAGTTTGGAGAATGACTCCAAAGGTTTGAGCTTGGCTA
2241 GAACCGGTAAGATGGTGACATTGTTGATCAAGACTGGGAATATAAGAGAGAAGCAGGTTTGGAGAGATCAATTTTGAACA
2321 TTTTAGACATGATTTTCTATTGGTCAGACATTGATGTGGAGATGTAAACACATGTAGGGTTGGTGAGAAGGAAAGATGAG
2401 AACAAAAGCAACATTGGGTTAAGGGAACTCGCTTAAGAAATTTTAAGCTATTTAATCTTGGGAACTGAAGCCAGTCATGT
2481 AAACATACTATACCAATCTAGTCCCTAACAGTGTTTTTTCTCTTGTGGCAGAAAGAATTGCTGTTCCTCTTTGGAATCTC
2561 CTTCCCAGACACCTTCAAAGTCTTATTGACACAGTAAAGGGAGGCCAACCACTACTAACAAGTTCTAGAAGATATAGGAT
2641 CTTCTATAGTAGGTTAATGGAAAATACAAAAACAAACAAACATACAATGAAACTGCCTCCTCTCAACCCATTTTCTTAAC
2721 AAATTCAATTTTCAAAACTAACCTTTAAAAAGAAAAGGAACAAAATGAAAAAGACAATAACTTTTAAACCACTTGAAAAT
2801 TACCTCAATCAAACTCTCAAGATTCAGTAGTAAAAGATAATAGAATGTTAGATCTGGAAAGGATATTAGAGAGTGTTTAG
2881 AAAAAACAACTTGCATTGCATCTGACTCCAGGTCCAGTGCTCTTTCTACTCTGAGCTGCTGCTTACCAGAAAGTACCATC
2961 TTCTTAAAAATCAATGAATGATATCCCAAACATTTTGAAACGTATGTAAATTTTGAGTTAAAATAGTTAACATTTCACAG
3041 GAATTCAACTACTGGTGCTATACTTTATACATAATACATTATCCTGTTAAATGCATTGACTATTAGACAAGGAATTATGA
3121 ATCATTTGTCAAATAATATTTATCTTTCAATGGAATCCATTGTGTCCACAATTGCAAAGCAATATTGAAGGGTACTAAGA
3201 TAGTTTGGGTTGTCAGCTAGGACATGAAAAATGTAGGTTTACTATACAGAACTGGATATGATAATATATTCATTAAAGTT
3281 ATGTTCTAACTGTTCAATAGACTTCTAGTAGATTAATTTAAATAGTTCCCCATACCGTGCTGCATCAGGATTTGATTTGT
3361 ATGCCATCTGTTGCAATGCACTTGGTTTTACTTGCTTGTCAATGAGAAATACTACTTCCAAATGTCTTCATGGTTTTGTC
3441 CATACTGGACTTTGGGTTATGATTTTTCACCTTCTACTCCCCTGAAATCATTATCCTAAAGTAACTTTTTTTAGGCACCT
3521 ATTTTCTGGGGATCAACATGTAAAAAAACATTTATATTGTCTTGAGGAGTTGTCAACAACAATAAATTGAAATAAAAAAG
3601 AAATGTATGATTTTC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugacGUCGGAACUGGAGGGUc 5'
              | ||||  :||||||| 
Target 5' ccgcCTGCCTCAGCCTCCCAc 3'
2058 - 2078 157.00 -19.10
2
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            |||| |||  |||||||: 
Target 5' acTGCAACCTCCACCTCCCGg 3'
1891 - 1911 155.00 -29.40
3
miRNA  3' ugaCGUCGGAACUGGAGGGUc 5'
             | | |:|  :||||||| 
Target 5' taaGAAACTTCTGCCTCCCAc 3'
695 - 715 150.00 -14.20
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1046728194 6 dbSNP
rs1298854572 9 dbSNP
rs191829376 12 dbSNP
rs773706678 14 dbSNP
rs761157225 24 dbSNP
rs1232566860 34 dbSNP
rs771034630 41 dbSNP
rs1349270482 42 dbSNP
rs891051264 43 dbSNP
rs776949104 48 dbSNP
rs1008112451 51 dbSNP
rs547684469 55 dbSNP
rs777660538 57 dbSNP
rs1473385538 62 dbSNP
rs746825447 64 dbSNP
rs1215250215 66 dbSNP
rs1259413124 75 dbSNP
rs1489664743 76 dbSNP
rs1211001649 90 dbSNP
rs964980366 105 dbSNP
rs34586805 109 dbSNP
rs1252953835 113 dbSNP
rs756966268 118 dbSNP
rs963846012 119 dbSNP
rs1462003402 120 dbSNP
rs762074617 127 dbSNP
rs1331453372 141 dbSNP
rs2227305 141 dbSNP
rs2231246 143 dbSNP
rs1223284847 158 dbSNP
rs769478430 160 dbSNP
rs1285822948 168 dbSNP
rs1156474304 171 dbSNP
rs759411654 174 dbSNP
rs865837239 175 dbSNP
rs1458194808 186 dbSNP
rs1026679995 187 dbSNP
rs1345387455 192 dbSNP
rs767507364 198 dbSNP
rs1158009445 202 dbSNP
rs775208928 206 dbSNP
rs1415353719 208 dbSNP
rs978772773 209 dbSNP
rs139049149 211 dbSNP
rs927237731 212 dbSNP
rs1202132241 228 dbSNP
rs1311563377 231 dbSNP
rs1374142775 237 dbSNP
rs1487092013 245 dbSNP
rs1261512253 259 dbSNP
rs756077276 262 dbSNP
rs1215343495 268 dbSNP
rs937272164 270 dbSNP
rs949674106 280 dbSNP
rs981007727 281 dbSNP
rs926817664 292 dbSNP
rs993078122 293 dbSNP
rs1312887845 310 dbSNP
rs917051878 312 dbSNP
rs929745058 316 dbSNP
rs1046820740 331 dbSNP
rs1451186915 363 dbSNP
rs763633512 374 dbSNP
rs941056583 379 dbSNP
rs1039367449 391 dbSNP
rs753307170 407 dbSNP
rs1467530245 409 dbSNP
rs1163696008 412 dbSNP
rs945453486 413 dbSNP
rs1385150810 415 dbSNP
rs1182347062 426 dbSNP
rs900752046 428 dbSNP
rs748778506 430 dbSNP
rs1201064825 431 dbSNP
rs1271382057 433 dbSNP
rs996411456 433 dbSNP
rs1223278471 434 dbSNP
rs1231502475 439 dbSNP
rs1008602737 453 dbSNP
rs1018141452 454 dbSNP
rs150857428 456 dbSNP
rs1307795505 467 dbSNP
rs1175163280 477 dbSNP
rs1294628266 479 dbSNP
rs890606895 480 dbSNP
rs778538331 483 dbSNP
rs183451889 488 dbSNP
rs1403783479 501 dbSNP
rs1363179662 506 dbSNP
rs968782139 514 dbSNP
rs187428800 516 dbSNP
rs1162144119 519 dbSNP
rs979210622 521 dbSNP
rs1464006434 524 dbSNP
rs112348175 527 dbSNP
rs1170160751 532 dbSNP
rs958885186 536 dbSNP
rs1427148759 539 dbSNP
rs1415309623 547 dbSNP
rs1200493804 556 dbSNP
rs1467181651 558 dbSNP
rs1266871579 592 dbSNP
rs1490190562 592 dbSNP
rs992734361 593 dbSNP
rs564716967 595 dbSNP
rs879074031 598 dbSNP
rs1480932748 607 dbSNP
rs1250742419 618 dbSNP
rs951217526 624 dbSNP
rs982516541 631 dbSNP
rs1025062416 639 dbSNP
rs192284121 640 dbSNP
rs1343047646 645 dbSNP
rs982569453 646 dbSNP
rs1391512890 647 dbSNP
rs1397796366 650 dbSNP
rs1381633006 655 dbSNP
rs1298175522 656 dbSNP
rs1460775843 663 dbSNP
rs1431923450 664 dbSNP
rs909673121 687 dbSNP
rs981054760 688 dbSNP
rs773807027 690 dbSNP
rs1039787623 695 dbSNP
rs761103916 710 dbSNP
rs776725463 720 dbSNP
rs1249711213 728 dbSNP
rs1194014377 729 dbSNP
rs748209727 739 dbSNP
rs989661776 746 dbSNP
rs1263561016 753 dbSNP
rs1202586549 773 dbSNP
rs1320940767 779 dbSNP
rs770076992 780 dbSNP
rs1221053379 794 dbSNP
rs773584146 797 dbSNP
rs1239131082 809 dbSNP
rs1052042257 810 dbSNP
rs890699734 820 dbSNP
rs1010443328 821 dbSNP
rs182619875 829 dbSNP
rs1020462146 832 dbSNP
rs1469657314 847 dbSNP
rs1051855188 850 dbSNP
rs866134619 855 dbSNP
rs1470518202 857 dbSNP
rs1000256260 866 dbSNP
rs1179518206 874 dbSNP
rs1039622278 875 dbSNP
rs1034781618 879 dbSNP
rs1243724967 885 dbSNP
rs899781183 896 dbSNP
rs1182718731 898 dbSNP
rs188141735 902 dbSNP
rs1048220579 908 dbSNP
rs775193946 909 dbSNP
rs760607384 911 dbSNP
rs1349257379 930 dbSNP
rs1186778493 949 dbSNP
rs192710221 957 dbSNP
rs1024208879 971 dbSNP
rs1385591795 972 dbSNP
rs951295737 1024 dbSNP
rs1478668900 1026 dbSNP
rs1339087306 1027 dbSNP
rs1320453981 1030 dbSNP
rs1171350040 1033 dbSNP
rs149519403 1043 dbSNP
rs1408082730 1047 dbSNP
rs750071721 1053 dbSNP
rs752821489 1059 dbSNP
rs1385781272 1060 dbSNP
rs970827454 1066 dbSNP
rs1442487867 1084 dbSNP
rs1243638190 1098 dbSNP
rs1193405891 1104 dbSNP
rs1001851228 1105 dbSNP
rs1259295656 1109 dbSNP
rs1360960641 1119 dbSNP
rs184125798 1123 dbSNP
rs58467104 1126 dbSNP
rs764052981 1127 dbSNP
rs867842204 1148 dbSNP
rs1353995598 1156 dbSNP
rs1326041527 1160 dbSNP
rs1402279421 1163 dbSNP
rs1406830928 1169 dbSNP
rs1271089302 1173 dbSNP
rs747357387 1176 dbSNP
rs933701578 1177 dbSNP
rs1162777650 1181 dbSNP
rs1050743051 1191 dbSNP
rs989692786 1193 dbSNP
rs1168262918 1194 dbSNP
rs1474985290 1199 dbSNP
rs914096487 1202 dbSNP
rs3810745 1204 dbSNP
rs946242328 1217 dbSNP
rs781556325 1223 dbSNP
rs1267590852 1227 dbSNP
rs757092684 1239 dbSNP
rs904666291 1243 dbSNP
rs987992103 1257 dbSNP
rs911964143 1262 dbSNP
rs943436059 1266 dbSNP
rs376918239 1271 dbSNP
rs1039021372 1282 dbSNP
rs780911167 1288 dbSNP
rs1225587709 1292 dbSNP
rs1346186636 1299 dbSNP
rs1280210237 1310 dbSNP
rs1434465424 1310 dbSNP
rs78375633 1319 dbSNP
rs75646554 1320 dbSNP
rs1055912045 1330 dbSNP
rs1356176859 1332 dbSNP
rs894541942 1341 dbSNP
rs139996159 1355 dbSNP
rs187922830 1369 dbSNP
rs1277714517 1372 dbSNP
rs951305594 1374 dbSNP
rs1480570212 1411 dbSNP
rs779832950 1417 dbSNP
rs1004059712 1419 dbSNP
rs1194131586 1429 dbSNP
rs193043716 1472 dbSNP
rs184798864 1473 dbSNP
rs886975055 1474 dbSNP
rs962599106 1478 dbSNP
rs1205849432 1479 dbSNP
rs1474424248 1482 dbSNP
rs1437542373 1492 dbSNP
rs1256595837 1498 dbSNP
rs188877102 1499 dbSNP
rs1324513940 1508 dbSNP
rs921057131 1510 dbSNP
rs1375697871 1523 dbSNP
rs1435382025 1534 dbSNP
rs1441423911 1544 dbSNP
rs955298824 1546 dbSNP
rs1397783242 1547 dbSNP
rs986468242 1554 dbSNP
rs1338427112 1561 dbSNP
rs1470158521 1562 dbSNP
rs1404893223 1564 dbSNP
rs1173587440 1576 dbSNP
rs913536451 1585 dbSNP
rs946298029 1600 dbSNP
rs1178239409 1605 dbSNP
rs1173039085 1620 dbSNP
rs1033349607 1625 dbSNP
rs143487924 1629 dbSNP
rs1185780043 1634 dbSNP
rs1462099842 1661 dbSNP
rs1255617722 1673 dbSNP
rs926184082 1675 dbSNP
rs1208304465 1680 dbSNP
rs957690311 1682 dbSNP
rs1285066858 1683 dbSNP
rs1011197437 1688 dbSNP
rs1021195657 1696 dbSNP
rs775310960 1697 dbSNP
rs1453081350 1701 dbSNP
rs768213029 1702 dbSNP
rs1056363578 1706 dbSNP
rs967306127 1716 dbSNP
rs987678156 1731 dbSNP
rs1157707884 1732 dbSNP
rs1417368535 1735 dbSNP
rs369069970 1736 dbSNP
rs1019504384 1739 dbSNP
rs181660806 1757 dbSNP
rs1255913412 1766 dbSNP
rs1180282358 1778 dbSNP
rs1014256313 1780 dbSNP
rs1242951067 1782 dbSNP
rs1326207899 1788 dbSNP
rs1215977328 1789 dbSNP
rs974757632 1798 dbSNP
rs1293779490 1814 dbSNP
rs1246628088 1831 dbSNP
rs1320848604 1843 dbSNP
rs768577490 1847 dbSNP
rs776418303 1848 dbSNP
rs1287994671 1852 dbSNP
rs887088961 1855 dbSNP
rs984472087 1861 dbSNP
rs1232970390 1865 dbSNP
rs908437950 1878 dbSNP
rs1368442677 1879 dbSNP
rs1163079578 1885 dbSNP
rs761804493 1886 dbSNP
rs1355411552 1887 dbSNP
rs1420474200 1892 dbSNP
rs1193230629 1893 dbSNP
rs1487310829 1903 dbSNP
rs1271179804 1909 dbSNP
rs1205348755 1910 dbSNP
rs771464369 1911 dbSNP
rs1263654791 1922 dbSNP
rs1229337559 1927 dbSNP
rs1307920582 1934 dbSNP
rs146652482 1937 dbSNP
rs1216420390 1962 dbSNP
rs1346808096 1964 dbSNP
rs1283338954 1977 dbSNP
rs906327090 1984 dbSNP
rs1390636872 1998 dbSNP
rs749983758 2000 dbSNP
rs1453675205 2001 dbSNP
rs113245227 2004 dbSNP
rs955117165 2008 dbSNP
rs1431785284 2009 dbSNP
rs986524012 2014 dbSNP
rs1432732880 2023 dbSNP
rs1441852985 2025 dbSNP
rs1491264368 2036 dbSNP
rs1159353409 2037 dbSNP
rs1491156006 2037 dbSNP
rs1257209861 2038 dbSNP
rs1384761159 2042 dbSNP
rs765979352 2044 dbSNP
rs1196317842 2060 dbSNP
rs1263440917 2061 dbSNP
rs1399291757 2061 dbSNP
rs893506112 2073 dbSNP
rs1328854419 2075 dbSNP
rs1299747576 2088 dbSNP
rs1393669943 2096 dbSNP
rs1378058764 2097 dbSNP
rs566217519 2098 dbSNP
rs1464436009 2099 dbSNP
rs148406723 2107 dbSNP
rs1456748340 2108 dbSNP
rs1395870328 2111 dbSNP
rs1465548201 2112 dbSNP
rs755314084 2113 dbSNP
rs1323386879 2114 dbSNP
rs979084192 2117 dbSNP
rs535480979 2122 dbSNP
rs1278556263 2132 dbSNP
rs1348048675 2134 dbSNP
rs1229842011 2146 dbSNP
rs1199540443 2150 dbSNP
rs781664930 2155 dbSNP
rs1342200778 2158 dbSNP
rs1273520871 2165 dbSNP
rs1262008838 2170 dbSNP
rs1239187226 2187 dbSNP
rs41312618 2190 dbSNP
rs1309248777 2196 dbSNP
rs1211739800 2198 dbSNP
rs902780662 2208 dbSNP
rs756728825 2218 dbSNP
rs1385437243 2228 dbSNP
rs936210291 2233 dbSNP
rs1395691090 2234 dbSNP
rs1400103391 2242 dbSNP
rs1160337577 2246 dbSNP
rs991677787 2247 dbSNP
rs1379614911 2248 dbSNP
rs183970870 2276 dbSNP
rs916032963 2289 dbSNP
rs1439609683 2312 dbSNP
rs1186352993 2322 dbSNP
rs1182850491 2328 dbSNP
rs1263469453 2330 dbSNP
rs950157754 2343 dbSNP
rs1487713789 2354 dbSNP
rs1045819165 2358 dbSNP
rs749406964 2370 dbSNP
rs964844281 2375 dbSNP
rs140541368 2379 dbSNP
rs1285186342 2392 dbSNP
rs1244561268 2395 dbSNP
rs1338918716 2396 dbSNP
rs1320610634 2399 dbSNP
rs1400622259 2410 dbSNP
rs763028670 2415 dbSNP
rs1296216306 2417 dbSNP
rs1426508869 2421 dbSNP
rs940061152 2424 dbSNP
rs952068801 2432 dbSNP
rs771207477 2435 dbSNP
rs1461430669 2470 dbSNP
rs907838409 2475 dbSNP
rs1038775275 2485 dbSNP
rs1487641807 2492 dbSNP
rs779013144 2497 dbSNP
rs1215032790 2500 dbSNP
rs1490974051 2511 dbSNP
rs1324446386 2536 dbSNP
rs764105817 2546 dbSNP
rs1209618009 2550 dbSNP
rs982434172 2554 dbSNP
rs1391491191 2555 dbSNP
rs1219507220 2563 dbSNP
rs927817056 2567 dbSNP
rs997133168 2600 dbSNP
rs1327540853 2608 dbSNP
rs1406899205 2619 dbSNP
rs1350383362 2632 dbSNP
rs751650180 2640 dbSNP
rs890988127 2647 dbSNP
rs1403320679 2648 dbSNP
rs1398380176 2651 dbSNP
rs757211679 2659 dbSNP
rs189375954 2662 dbSNP
rs1293754886 2667 dbSNP
rs1008051588 2673 dbSNP
rs1333875406 2683 dbSNP
rs181398633 2684 dbSNP
rs776528875 2695 dbSNP
rs1247736780 2700 dbSNP
rs1198796970 2701 dbSNP
rs1259877900 2723 dbSNP
rs761716415 2726 dbSNP
rs966446920 2728 dbSNP
rs979121177 2744 dbSNP
rs769746238 2757 dbSNP
rs957655091 2768 dbSNP
rs1317499186 2776 dbSNP
rs946432280 2781 dbSNP
rs185825253 2789 dbSNP
rs111403625 2790 dbSNP
rs1368403270 2822 dbSNP
rs1274115119 2835 dbSNP
rs1042064676 2842 dbSNP
rs1337264712 2842 dbSNP
rs1436354694 2844 dbSNP
rs950250328 2876 dbSNP
rs1190312767 2884 dbSNP
rs1331749535 2888 dbSNP
rs1397654112 2903 dbSNP
rs1178152598 2912 dbSNP
rs1414488809 2914 dbSNP
rs981568719 2917 dbSNP
rs1191086403 2924 dbSNP
rs1477309070 2926 dbSNP
rs1258716064 2937 dbSNP
rs1179639155 2942 dbSNP
rs1457652450 2945 dbSNP
rs767543248 2953 dbSNP
rs902135697 2956 dbSNP
rs1475064895 2964 dbSNP
rs1009189499 2976 dbSNP
rs766006283 2987 dbSNP
rs908672644 2995 dbSNP
rs940070937 3003 dbSNP
rs1163171818 3006 dbSNP
rs1375304370 3011 dbSNP
rs900706982 3021 dbSNP
rs1309957242 3024 dbSNP
rs1445686395 3028 dbSNP
rs750234793 3044 dbSNP
rs751147579 3046 dbSNP
rs759270766 3048 dbSNP
rs1050136832 3052 dbSNP
rs767765717 3056 dbSNP
rs1393690767 3061 dbSNP
rs891038976 3082 dbSNP
rs1401998398 3090 dbSNP
rs1313092451 3101 dbSNP
rs753165695 3112 dbSNP
rs1412735517 3113 dbSNP
rs1279805689 3126 dbSNP
rs1378875122 3135 dbSNP
rs1005338244 3139 dbSNP
rs1020759614 3150 dbSNP
rs971796875 3151 dbSNP
rs982080400 3153 dbSNP
rs1208090413 3163 dbSNP
rs1326971972 3172 dbSNP
rs1226597864 3186 dbSNP
rs927849556 3192 dbSNP
rs756626664 3193 dbSNP
rs990667267 3194 dbSNP
rs1228724259 3204 dbSNP
rs915045304 3206 dbSNP
rs1300785396 3211 dbSNP
rs1432207447 3217 dbSNP
rs1360622875 3224 dbSNP
rs1000992348 3226 dbSNP
rs1419655828 3240 dbSNP
rs946487111 3246 dbSNP
rs1167317261 3249 dbSNP
rs1424814646 3253 dbSNP
rs1337505536 3255 dbSNP
rs1032022950 3257 dbSNP
rs191126222 3270 dbSNP
rs923662536 3280 dbSNP
rs1281341765 3299 dbSNP
rs944356876 3309 dbSNP
rs779884411 3317 dbSNP
rs1222024133 3327 dbSNP
rs1320895492 3328 dbSNP
rs1310063622 3329 dbSNP
rs1220112755 3333 dbSNP
rs1340551553 3337 dbSNP
rs181868629 3338 dbSNP
rs1397644140 3343 dbSNP
rs1359169836 3372 dbSNP
rs757264714 3393 dbSNP
rs1429699806 3401 dbSNP
rs1023208520 3402 dbSNP
rs971620839 3404 dbSNP
rs186553714 3405 dbSNP
rs2192257 3415 dbSNP
rs1455170847 3423 dbSNP
rs1424671735 3428 dbSNP
rs1173676619 3457 dbSNP
rs754661816 3461 dbSNP
rs1432420653 3469 dbSNP
rs1269294834 3475 dbSNP
rs1191716423 3477 dbSNP
rs974539661 3478 dbSNP
rs1488007206 3481 dbSNP
rs758704954 3491 dbSNP
rs887941493 3497 dbSNP
rs752436000 3506 dbSNP
rs1318136034 3507 dbSNP
rs1257094465 3516 dbSNP
rs1216245703 3520 dbSNP
rs1332320263 3527 dbSNP
rs920009905 3534 dbSNP
rs1303993569 3535 dbSNP
rs1005002309 3537 dbSNP
rs932677613 3540 dbSNP
rs1049747848 3541 dbSNP
rs1233339016 3541 dbSNP
rs1293309386 3542 dbSNP
rs780792720 3542 dbSNP
rs1401300788 3554 dbSNP
rs912484909 3562 dbSNP
rs1003306397 3571 dbSNP
rs747941483 3574 dbSNP
rs1034323513 3576 dbSNP
rs1176649785 3587 dbSNP
rs1432494706 3600 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugACGUCGGAACU-GGAGG-GUc 5'
            | ||| | ||| || || || 
Target 5' auUACAGGCGUGAGCCACCGCAc 3'
12 - 34
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000218008.3 | 3UTR | ACAGUGCUGGGAUUACAGGCGUGAGCCACCGCACCCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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