pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CRKL   
Synonyms -
Description CRK like proto-oncogene, adaptor protein
Transcript NM_005207   
Expression
Putative miRNA Targets on CRKL
3'UTR of CRKL
(miRNA target sites are highlighted)
>CRKL|NM_005207|3'UTR
   1 TTGCTGTTGCCCTGTTTCCTGCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCTCTCAT
  81 AGGCAAGTCACACTGCATTGCCGAAGTCCAGCTTTCTGCAGACTGGCAGTCGCACACACATTTGGAATGCACACAGCGGC
 161 TGCCTCCTGATGTTTGTATCATAGTCGTATTGTCAAAGAGTAGCCGATTTTAGAGTTCTTTTGGATCATAAACTGGAAAT
 241 ACTGATGGAAGCACACAAGTGGAGAGAAGTTGACATGGAAAGGGTCTTCCTTCTCATTGCTGCCCGTTTGTACATGGGAC
 321 TGATTCTGTTGTGTTCACCAGAGAAAGCTTGAGGCCATGGCGAGATACTGCATGTTTGCTGTTCCACAAAGCAGTGGCTT
 401 AGCTGCCATCTTGCTTTTCTTTGGACAACAGGAAGTGAACCTTAAGGAAGAGAGAATTCTGTTCTAAAACTCCAAAATCT
 481 GGCTTTTTTTTTTCTTTTGTTTTGGTTTGGTTTTGGAAAACTAATTAATTAGACTTGTGTGGGGGTTTTTTTTTGTTTTG
 561 TTTTGTTTGTTTTGTTTTGTTTTTTTGAGACGGTGTCTCGCTGCATCACCCAGGCTGGAGTGCAGTGGCGCAATCTCGCC
 641 TTCCTGCAGTCTCCGCCTCCTGAGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTGCAGGCGCGCACA
 721 CCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCATCATGTTGACCAGGCTGGTCTCAAACTCCTGACTT
 801 CAGGTGATCCACCCGCCTTCAGCCTCCCAACGTGCTGGGATTACAGCCGTGAGCCGCCGCGCCTGGCCTAGACTTGTGTG
 881 TTCTAAACAGGTTAAGTAGCAGGTTGGGTTTTTATGATAGTGCAAGGAATGACTCATGCCTCTGAGCTTCTAAACTGAAG
 961 CTGCTGTAACTAAAGGAATCTGAAAAGAACAACCCTGAAGCAGAGGCCTTTATTGTCTTGGTTGCCAGTAGTACCTTGTT
1041 TTGCCATGTAGCAGACAACACACAAAATAATGCAGTTGTGGTGTGCCATGCTATGTGCACAGCCCCTTGGATTACTTTGT
1121 TTTAAAAAGCATCAGAGTTGGGGGTACTTTAGGGAAACCTTTGCTTACCTTGTTTTGCCAGTGATAAGAGCAGTGGGTTG
1201 GAGGGCACTTGGCCAGTTTTCTGTTCAGCTTTTCAGTGAATGTACCCCTTTAAGGTTCAGACTTAAACTTCCTTAAAAAG
1281 TGGCGTTGTTCATAGAATCGTTGGACTCATTAATGAATCGTTCAACTCCACTCACTGAAGCCCAGACCTCCGTGCCCAGG
1361 CCCAATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTCTAAGTAAGTGTCTGTGATGCTCC
1441 CAAGCAAAGGAAATGCAAGCTCTGGAAATTCGTTAATGTATTTGATGTCTTAGTGTTTTAGTGACTAGGGAGACCATTAA
1521 CTAGTTTATCATTAACCACTTATCAGTGTATTGATGTTAAAGCATTTCCCTGTTAGCTAAAAGAGGCCTGTTCATACAAG
1601 CCAACTGGTATATACGTGTGGTTCATCCATCATCTGCTGCACATAGCAGACTAGAATTCTGGGAACCCTGTGCAATTCAG
1681 TCTGCTCTCCCTTGTGGACCCTGGTAAAGAAAAGCCTCAGCTCATAGTGAACACAGCAGACCTAGAAATGTAGCAGCAGC
1761 CTACTGAGTAGCTTTCATTTACTGATCATCTGCTGTGACTGTGGCCCTGTCTGGAGGTTCCTAGGTTTTGAGATTTAGAG
1841 CAATGCATTCTGGAGACAGAACCAGCAGAACAGCCATTTTTCAATTTTTCTTTAAATCAGTATTCCATCAGGCAGATAAC
1921 TGCTGTATTCATGAATCTTGAGAGTGTTCCTGAGACAGAATTAATGGTCATTTGGGAAAACTATCGCCATGGCTTCCCAT
2001 CTGTGGTTTTCCTCTAAAAGCCTTGGAGATTAGCCCTTCCTTGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGT
2081 CTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCTTATTTTGGGTTCAGGCCTGGCGTAGCACCCACAAGTGG
2161 CAGACATATCACAAGAGTCCCCAGACTCTGCCTAGAAACAGTGTTTGCCCTTTGGCCAGTGACGTGGTTCATCCCGGCCC
2241 ATGTTGAGCCATGAGTGGAGTTTCCAACAGAGGGAGGAATGTGTGCCTTGTTCAAGGAGGGCACGACCCTTAGGCCTTTT
2321 TCAACCAGATTTAGCTGAAGGGCTTGACACCTTTGAATTACAGCAGTTGACTCAGAGTGCAAGAAGTCTGGCCATTTTGG
2401 AAAGCAAGGTTTCCTTTCAGCCCTGTCTACTGACCAATACCCCGACTCACCTTGTGTGGCGCACTTCAGAATCAGATATA
2481 CCTAGAGTATACCTGTGGTTTGGTTTTATAATTAATCAGCTCGTTACTTCAGCCCATGAAAATGGCATCCAGGGCTGCCA
2561 GGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCCAGATATGTGCCAAAACTAGTAAAACTTAACGGACT
2641 TACAACCTTGTCAGTTTTTTTAATGAGGCAGGGATACTCTGTTTTTCACACTAAACATATGAATGCAGCACTGCTGCCTC
2721 AGCTCAGCTTCGTGCCTGGGTTCCCCACTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAG
2801 GGTGGGTGTTCATAACTGCTACTTGCTCTGCTCTACCATGTTTAAAGAAATATTTGGATGTTAAATTAACTCACTATGGT
2881 TTTTCACCTGGGAAGGAAACAAATTACGTACTAGAGGGCATTGACTGGTTAAAAACTTGTGTATCCCGGGAAGGACCTGC
2961 GGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCACCTGATGACATGGTTAACGAGGAAGACGATGTGTTGACCGGC
3041 TGCCGTTTGAGGACTTTGGTCACCCAGACTAGACACCTTCTGTGCTCATGTTTGGAAAGCTGAAAGGGAAGGACAGCTGT
3121 GCCCTCCTGGGAGCTCATGTGTCCCTGGCGCTGTGCTAGCTTTCCTTTACAGCTGTTTACAGACAAGGCAGGCCTGAGGC
3201 AGATGGCCACTGCTCTTGTGATGTTTGCTCAGAGGAATATGAACATTTTATTTTTGAAAAGGGATGATGTGGTTTTTTGC
3281 CAGGTGTTTATAATTAATCCTTTAATATTATGGTTATTAACCTCTTAAACATGAATGAATTCTTGATTGTTTTAACACAG
3361 TACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCCTCAACTCCACCCTCTGCGACCGGAGGACTATGCCCCT
3441 AGTAACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGT
3521 TGTCCCTACAGGAGGAACAGTGGCCTTGCTTCTTAGACGGTCTTCACTGTGTGTTTTAAAACAACAACAACAACAACAAC
3601 AACAACATAAAACTCTTTTGACCTGTAACTTAAAGATCATAAACTTCAGGCAATAATATTTTCTGTGTAAGCTTTTAAAA
3681 TTATTTTTGGGGATCATAGCTTGTTTTATTTTGTGCTATAAAATTAACAGTATTAAATGACTTATATTCTTAGAATACAT
3761 CGAGTGTCTTTTCTTAACAGATTAGTGCCTTTTTATTTTTGTATTCCGTTTTACGTTACTGGTCCCAGCATCAAAACCCT
3841 TGTTTCCATGGCCTGTTTGTATATTGTCTCAATAAAACTTGCATCAGCCGGTGGTGGCGGCAGCAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugacGUCGGAACU-GGAGGGUc 5'
              | ||||| | ||||||| 
Target 5' ccacCCGCCTTCAGCCTCCCAa 3'
809 - 830 161.00 -17.80
2
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            | | ||||  :||||||| 
Target 5' tcTCCTGCCTCAGCCTCCCAa 3'
675 - 695 159.00 -20.60
3
miRNA  3' ugacguCGGAACUGGAGGGUc 5'
                ||| ||:|:||||| 
Target 5' actatcGCCATGGCTTCCCAt 3'
1980 - 2000 147.00 -19.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30152205 14 COSMIC
COSN26565212 62 COSMIC
COSN30162707 75 COSMIC
COSN30494465 77 COSMIC
COSN25180772 133 COSMIC
COSN31575748 136 COSMIC
COSN30511189 175 COSMIC
COSN31570583 207 COSMIC
COSN30137283 217 COSMIC
COSN1259459 253 COSMIC
COSN20117162 494 COSMIC
COSN1259460 495 COSMIC
COSN9161964 546 COSMIC
COSN29372788 715 COSMIC
COSN31961946 988 COSMIC
COSN17075706 1201 COSMIC
COSN21492652 1415 COSMIC
COSN22448442 1554 COSMIC
COSN21660247 1584 COSMIC
COSN31562665 2493 COSMIC
COSN22588846 2632 COSMIC
COSN31563154 2638 COSMIC
COSN31577194 2698 COSMIC
COSN17337516 2754 COSMIC
COSN31548132 2827 COSMIC
COSN1259461 3100 COSMIC
COSN28813562 3188 COSMIC
COSN1895149 3284 COSMIC
COSN31546984 3371 COSMIC
COSN32064240 3455 COSMIC
COSN8346385 3519 COSMIC
COSN23713815 3580 COSMIC
COSN20117167 3606 COSMIC
COSN20117166 3608 COSMIC
COSN31579223 3666 COSMIC
COSN31538039 3763 COSMIC
COSN26171823 3838 COSMIC
COSN26170622 3858 COSMIC
rs117003805 1714 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs993387735 2 dbSNP
rs1463700584 4 dbSNP
rs1327696332 7 dbSNP
rs1035280926 10 dbSNP
rs1395013800 13 dbSNP
rs1385985046 18 dbSNP
rs1299192111 19 dbSNP
rs754239104 22 dbSNP
rs1229704391 23 dbSNP
rs763362875 26 dbSNP
rs759848266 36 dbSNP
rs373218389 37 dbSNP
rs765462541 42 dbSNP
rs752850306 49 dbSNP
rs758615647 51 dbSNP
rs962435561 60 dbSNP
rs973515333 81 dbSNP
rs1439116826 82 dbSNP
rs959738886 86 dbSNP
rs560990413 93 dbSNP
rs769177194 95 dbSNP
rs1237242957 103 dbSNP
rs1437405635 105 dbSNP
rs920559358 107 dbSNP
rs747678003 118 dbSNP
rs969942007 121 dbSNP
rs202127561 131 dbSNP
rs878948440 132 dbSNP
rs1287960932 133 dbSNP
rs1208427278 138 dbSNP
rs979599831 139 dbSNP
rs1304052915 140 dbSNP
rs911122423 149 dbSNP
rs943995115 159 dbSNP
rs771582414 164 dbSNP
rs1324767763 168 dbSNP
rs1398525056 173 dbSNP
rs530023569 174 dbSNP
rs549067426 178 dbSNP
rs891668341 182 dbSNP
rs772959264 187 dbSNP
rs566056236 188 dbSNP
rs1040176667 197 dbSNP
rs1260707544 201 dbSNP
rs1176078449 206 dbSNP
rs899893281 207 dbSNP
rs748417301 219 dbSNP
rs1376200013 223 dbSNP
rs1042821625 235 dbSNP
rs35335239 235 dbSNP
rs535066674 244 dbSNP
rs1428793048 245 dbSNP
rs1264876687 249 dbSNP
rs1001175294 256 dbSNP
rs1034001863 258 dbSNP
rs760366910 262 dbSNP
rs1232982264 270 dbSNP
rs766255001 271 dbSNP
rs1014542916 272 dbSNP
rs1250868289 275 dbSNP
rs737894 276 dbSNP
rs962244774 278 dbSNP
rs547902233 280 dbSNP
rs753116903 282 dbSNP
rs1342059682 284 dbSNP
rs1356534568 296 dbSNP
rs1195913893 297 dbSNP
rs1027758624 298 dbSNP
rs1396369436 303 dbSNP
rs1166884063 306 dbSNP
rs1462039018 311 dbSNP
rs1425079531 314 dbSNP
rs571806225 315 dbSNP
rs1258021453 316 dbSNP
rs545959252 316 dbSNP
rs537609450 319 dbSNP
rs189640104 321 dbSNP
rs1253174456 329 dbSNP
rs1548410 331 dbSNP
rs978924259 332 dbSNP
rs1196450712 339 dbSNP
rs1374758687 340 dbSNP
rs1232919604 341 dbSNP
rs1032470801 351 dbSNP
rs1475716627 358 dbSNP
rs956895996 362 dbSNP
rs17212305 363 dbSNP
rs114248326 370 dbSNP
rs944308625 373 dbSNP
rs1328256050 374 dbSNP
rs1401886230 381 dbSNP
rs572500671 382 dbSNP
rs1162143268 384 dbSNP
rs12628354 387 dbSNP
rs1391710532 391 dbSNP
rs1418114620 395 dbSNP
rs913023853 398 dbSNP
rs1299605606 402 dbSNP
rs1328528774 407 dbSNP
rs1468418925 409 dbSNP
rs945916396 411 dbSNP
rs533878900 415 dbSNP
rs1458994852 418 dbSNP
rs183405299 419 dbSNP
rs1213117037 429 dbSNP
rs937120875 438 dbSNP
rs1292279844 449 dbSNP
rs1055381400 450 dbSNP
rs1222222599 451 dbSNP
rs1350417371 455 dbSNP
rs1234575530 464 dbSNP
rs1280463588 465 dbSNP
rs1242981003 471 dbSNP
rs1265711250 472 dbSNP
rs1369388224 474 dbSNP
rs895488034 475 dbSNP
rs1439501351 483 dbSNP
rs1383995720 484 dbSNP
rs1398550189 484 dbSNP
rs200139060 484 dbSNP
rs398081677 484 dbSNP
rs60913011 484 dbSNP
rs908376727 491 dbSNP
rs397819599 494 dbSNP
rs200621487 495 dbSNP
rs939884683 495 dbSNP
rs1193154735 498 dbSNP
rs1447305489 500 dbSNP
rs1014887127 501 dbSNP
rs1192857067 504 dbSNP
rs1421383889 505 dbSNP
rs867625059 516 dbSNP
rs1056958276 518 dbSNP
rs1416283591 522 dbSNP
rs895713102 522 dbSNP
rs558215893 523 dbSNP
rs1303328535 535 dbSNP
rs575011073 538 dbSNP
rs994996415 539 dbSNP
rs1369312030 540 dbSNP
rs1367729319 541 dbSNP
rs1276053848 543 dbSNP
rs1428270276 544 dbSNP
rs1421278031 546 dbSNP
rs544048902 546 dbSNP
rs904188858 546 dbSNP
rs1373334205 547 dbSNP
rs1031456549 550 dbSNP
rs1184834341 551 dbSNP
rs59011694 551 dbSNP
rs1019809338 552 dbSNP
rs1475247091 552 dbSNP
rs529888353 556 dbSNP
rs1291956600 557 dbSNP
rs1007685542 561 dbSNP
rs1212248445 562 dbSNP
rs368709446 562 dbSNP
rs572061085 562 dbSNP
rs1018919372 564 dbSNP
rs187614589 566 dbSNP
rs567863750 566 dbSNP
rs976072908 566 dbSNP
rs977047184 570 dbSNP
rs913167982 571 dbSNP
rs1234634327 580 dbSNP
rs1448732957 580 dbSNP
rs1360822482 582 dbSNP
rs1409467343 590 dbSNP
rs1312844196 591 dbSNP
rs879302997 591 dbSNP
rs190588920 592 dbSNP
rs1474318936 596 dbSNP
rs1242176940 598 dbSNP
rs183479700 600 dbSNP
rs1231660991 601 dbSNP
rs1204375470 605 dbSNP
rs925823715 610 dbSNP
rs937089856 616 dbSNP
rs1261004828 622 dbSNP
rs1220114232 623 dbSNP
rs984156013 625 dbSNP
rs1292494273 630 dbSNP
rs188333956 631 dbSNP
rs553642758 633 dbSNP
rs571739083 634 dbSNP
rs1441341648 636 dbSNP
rs1036460553 638 dbSNP
rs193003105 639 dbSNP
rs751862979 645 dbSNP
rs199836325 650 dbSNP
rs948623120 655 dbSNP
rs184656524 656 dbSNP
rs1177171370 658 dbSNP
rs889288385 661 dbSNP
rs904179834 665 dbSNP
rs1420743501 668 dbSNP
rs1158381606 669 dbSNP
rs1358976955 672 dbSNP
rs1007617008 673 dbSNP
rs1417182128 683 dbSNP
rs1303876441 686 dbSNP
rs567840743 694 dbSNP
rs1393786791 696 dbSNP
rs1308768929 708 dbSNP
rs1223191855 709 dbSNP
rs1019055157 714 dbSNP
rs536495152 715 dbSNP
rs1239208163 716 dbSNP
rs1283662434 717 dbSNP
rs1052789936 721 dbSNP
rs150480292 724 dbSNP
rs1009553159 725 dbSNP
rs1021402735 726 dbSNP
rs1255273332 731 dbSNP
rs1440892919 741 dbSNP
rs868823505 750 dbSNP
rs1483007683 751 dbSNP
rs1452036060 757 dbSNP
rs566860260 758 dbSNP
rs1210086761 760 dbSNP
rs1489242862 764 dbSNP
rs1258780104 770 dbSNP
rs1215618753 778 dbSNP
rs774386531 781 dbSNP
rs1354392626 788 dbSNP
rs138659879 791 dbSNP
rs377709552 791 dbSNP
rs1231910241 793 dbSNP
rs1370388717 795 dbSNP
rs978689840 796 dbSNP
rs1302015773 802 dbSNP
rs1032772245 811 dbSNP
rs1388796820 812 dbSNP
rs891525154 815 dbSNP
rs538214183 816 dbSNP
rs1420706420 831 dbSNP
rs1008661891 832 dbSNP
rs757554478 833 dbSNP
rs558152517 836 dbSNP
rs916987677 839 dbSNP
rs1178204959 845 dbSNP
rs574948297 849 dbSNP
rs949866428 850 dbSNP
rs1488498393 853 dbSNP
rs1378862943 855 dbSNP
rs971747057 856 dbSNP
rs570361391 857 dbSNP
rs554414375 860 dbSNP
rs370855350 861 dbSNP
rs952723146 862 dbSNP
rs1235511941 863 dbSNP
rs1306043614 877 dbSNP
rs1295128425 884 dbSNP
rs750800364 895 dbSNP
rs9625171 900 dbSNP
rs1342798253 904 dbSNP
rs908562732 907 dbSNP
rs1299355154 915 dbSNP
rs57573660 917 dbSNP
rs1467142976 918 dbSNP
rs943538774 924 dbSNP
rs1040967808 926 dbSNP
rs1169561935 927 dbSNP
rs917085502 928 dbSNP
rs1445610432 932 dbSNP
rs1185492516 943 dbSNP
rs1306561689 952 dbSNP
rs1441837760 961 dbSNP
rs1256761057 962 dbSNP
rs1337565799 964 dbSNP
rs1257449897 966 dbSNP
rs761951740 967 dbSNP
rs377011515 976 dbSNP
rs1320227571 978 dbSNP
rs1372918894 991 dbSNP
rs532467614 993 dbSNP
rs1341383171 994 dbSNP
rs948592301 1000 dbSNP
rs1390131756 1008 dbSNP
rs1393725276 1010 dbSNP
rs1330070298 1019 dbSNP
rs980026883 1029 dbSNP
rs1425322279 1034 dbSNP
rs925841084 1036 dbSNP
rs935919866 1045 dbSNP
rs1310332526 1057 dbSNP
rs1368787010 1060 dbSNP
rs1189561494 1066 dbSNP
rs1435984652 1073 dbSNP
rs1237690189 1078 dbSNP
rs545372340 1080 dbSNP
rs1206485522 1082 dbSNP
rs1260098386 1083 dbSNP
rs1458220560 1086 dbSNP
rs565285662 1088 dbSNP
rs901914571 1090 dbSNP
rs1052740300 1091 dbSNP
rs530970637 1094 dbSNP
rs1357536501 1103 dbSNP
rs1010099940 1107 dbSNP
rs1236574922 1115 dbSNP
rs11913242 1125 dbSNP
rs1286273132 1129 dbSNP
rs1237592597 1139 dbSNP
rs1376775033 1141 dbSNP
rs1479242004 1147 dbSNP
rs186924008 1151 dbSNP
rs1446867765 1154 dbSNP
rs891471065 1171 dbSNP
rs780568915 1172 dbSNP
rs1404340341 1178 dbSNP
rs747624627 1181 dbSNP
rs1425133380 1186 dbSNP
rs1164748728 1187 dbSNP
rs1040562598 1189 dbSNP
rs73392523 1196 dbSNP
rs1179111198 1210 dbSNP
rs1441625228 1236 dbSNP
rs1251178555 1237 dbSNP
rs1000039785 1238 dbSNP
rs1032907980 1252 dbSNP
rs530300574 1256 dbSNP
rs138343678 1261 dbSNP
rs991268483 1263 dbSNP
rs1292523311 1284 dbSNP
rs1203750370 1285 dbSNP
rs777279089 1285 dbSNP
rs763897430 1286 dbSNP
rs1028508624 1289 dbSNP
rs888667303 1292 dbSNP
rs971166297 1293 dbSNP
rs1005765955 1300 dbSNP
rs1272548826 1300 dbSNP
rs566796996 1301 dbSNP
rs1015506722 1321 dbSNP
rs972225371 1326 dbSNP
rs1417643615 1331 dbSNP
rs9613388 1341 dbSNP
rs770494981 1352 dbSNP
rs1421391384 1359 dbSNP
rs558089316 1362 dbSNP
rs985019646 1366 dbSNP
rs970187632 1370 dbSNP
rs576482420 1371 dbSNP
rs1488171315 1375 dbSNP
rs1264301137 1385 dbSNP
rs1256454877 1387 dbSNP
rs568510220 1390 dbSNP
rs149555262 1401 dbSNP
rs191277182 1405 dbSNP
rs1246514900 1406 dbSNP
rs1218111849 1407 dbSNP
rs1345032301 1411 dbSNP
rs370284592 1414 dbSNP
rs555511198 1417 dbSNP
rs1339622302 1418 dbSNP
rs1487677541 1418 dbSNP
rs935866720 1420 dbSNP
rs1040539139 1422 dbSNP
rs1175523726 1423 dbSNP
rs902049313 1430 dbSNP
rs1167895325 1432 dbSNP
rs867971486 1435 dbSNP
rs1168842447 1439 dbSNP
rs945442142 1440 dbSNP
rs1424833536 1441 dbSNP
rs1196289760 1442 dbSNP
rs944383932 1456 dbSNP
rs1237424167 1464 dbSNP
rs764645414 1470 dbSNP
rs903838699 1472 dbSNP
rs533959023 1473 dbSNP
rs769818290 1478 dbSNP
rs554009915 1485 dbSNP
rs577165732 1492 dbSNP
rs1339730250 1500 dbSNP
rs1055076931 1503 dbSNP
rs894387350 1504 dbSNP
rs775612009 1508 dbSNP
rs1013285839 1510 dbSNP
rs1050316803 1511 dbSNP
rs375222775 1514 dbSNP
rs762925828 1516 dbSNP
rs1229117494 1517 dbSNP
rs993234184 1527 dbSNP
rs562821285 1541 dbSNP
rs144243028 1544 dbSNP
rs1422438495 1549 dbSNP
rs1413472728 1551 dbSNP
rs1219233460 1563 dbSNP
rs1474048115 1577 dbSNP
rs1238743622 1578 dbSNP
rs1014187468 1595 dbSNP
rs751591534 1596 dbSNP
rs1258324814 1598 dbSNP
rs762033843 1605 dbSNP
rs1319739819 1612 dbSNP
rs970515630 1616 dbSNP
rs910254485 1617 dbSNP
rs964956585 1625 dbSNP
rs976745143 1626 dbSNP
rs1381244183 1628 dbSNP
rs1307242989 1637 dbSNP
rs1446143600 1639 dbSNP
rs1472800969 1640 dbSNP
rs1033257776 1641 dbSNP
rs1456537226 1643 dbSNP
rs1349710184 1647 dbSNP
rs957225698 1651 dbSNP
rs57484744 1652 dbSNP
rs1411162098 1656 dbSNP
rs375244998 1661 dbSNP
rs1238214615 1667 dbSNP
rs1421336809 1674 dbSNP
rs913176906 1676 dbSNP
rs1487290042 1687 dbSNP
rs965969131 1688 dbSNP
rs780669705 1690 dbSNP
rs945553353 1692 dbSNP
rs1042583917 1696 dbSNP
rs976124723 1701 dbSNP
rs561400042 1702 dbSNP
rs1283798144 1704 dbSNP
rs1359615312 1707 dbSNP
rs117003805 1714 dbSNP
rs1055044472 1716 dbSNP
rs1377771690 1724 dbSNP
rs895151250 1725 dbSNP
rs750745536 1728 dbSNP
rs564770745 1736 dbSNP
rs865884949 1739 dbSNP
rs1367167341 1749 dbSNP
rs1294545851 1754 dbSNP
rs910043762 1764 dbSNP
rs1358955250 1765 dbSNP
rs1158610281 1775 dbSNP
rs369234111 1778 dbSNP
rs1448848706 1788 dbSNP
rs1420792009 1801 dbSNP
rs1046071247 1806 dbSNP
rs1160646568 1808 dbSNP
rs1431148167 1809 dbSNP
rs941559239 1814 dbSNP
rs1266244080 1822 dbSNP
rs1377227288 1841 dbSNP
rs1191342173 1842 dbSNP
rs1490788339 1846 dbSNP
rs937829045 1848 dbSNP
rs907013951 1850 dbSNP
rs1260704900 1851 dbSNP
rs993720673 1854 dbSNP
rs1287213320 1856 dbSNP
rs1353363582 1859 dbSNP
rs780517938 1860 dbSNP
rs897384643 1865 dbSNP
rs184989297 1866 dbSNP
rs1302250763 1869 dbSNP
rs112216359 1870 dbSNP
rs1338938895 1882 dbSNP
rs1046107870 1885 dbSNP
rs368777340 1896 dbSNP
rs951770677 1896 dbSNP
rs1401189892 1903 dbSNP
rs754429501 1908 dbSNP
rs1301541074 1909 dbSNP
rs1464105846 1924 dbSNP
rs905905244 1925 dbSNP
rs1006014765 1926 dbSNP
rs1186195909 1931 dbSNP
rs1192662862 1936 dbSNP
rs1488610616 1939 dbSNP
rs1002017741 1945 dbSNP
rs1441196517 1946 dbSNP
rs1482987174 1959 dbSNP
rs1256618539 1982 dbSNP
rs532613829 1986 dbSNP
rs552431165 1987 dbSNP
rs1010051538 1988 dbSNP
rs1020141704 1990 dbSNP
rs1219647216 1994 dbSNP
rs964741331 2000 dbSNP
rs976027447 2002 dbSNP
rs921592058 2004 dbSNP
rs976337040 2016 dbSNP
rs923498305 2030 dbSNP
rs1302884211 2038 dbSNP
rs1470789401 2039 dbSNP
rs1397659231 2048 dbSNP
rs967015748 2054 dbSNP
rs372052771 2055 dbSNP
rs1437520329 2056 dbSNP
rs189274432 2062 dbSNP
rs925491455 2063 dbSNP
rs936717110 2075 dbSNP
rs777271857 2078 dbSNP
rs1037129479 2079 dbSNP
rs1169613040 2082 dbSNP
rs916550341 2082 dbSNP
rs1456453611 2085 dbSNP
rs1257667748 2086 dbSNP
rs1403954836 2094 dbSNP
rs116709245 2095 dbSNP
rs1310170406 2096 dbSNP
rs3171744 2097 dbSNP
rs1341586658 2114 dbSNP
rs568098676 2115 dbSNP
rs1376709833 2123 dbSNP
rs1046418027 2132 dbSNP
rs907103655 2139 dbSNP
rs929275841 2140 dbSNP
rs905845998 2142 dbSNP
rs575162167 2145 dbSNP
rs887612388 2155 dbSNP
rs553946602 2165 dbSNP
rs781624578 2170 dbSNP
rs544163986 2172 dbSNP
rs893196171 2175 dbSNP
rs1010332916 2193 dbSNP
rs1020089504 2195 dbSNP
rs1237587709 2196 dbSNP
rs1437932357 2196 dbSNP
rs1179549369 2198 dbSNP
rs539676517 2200 dbSNP
rs376149893 2201 dbSNP
rs1209601049 2210 dbSNP
rs1357426483 2215 dbSNP
rs1238560319 2224 dbSNP
rs1294594633 2224 dbSNP
rs997577316 2225 dbSNP
rs997833498 2231 dbSNP
rs139100081 2234 dbSNP
rs533624313 2236 dbSNP
rs1337161985 2237 dbSNP
rs1437657900 2243 dbSNP
rs746519194 2244 dbSNP
rs770663498 2245 dbSNP
rs1200709485 2247 dbSNP
rs1378176868 2248 dbSNP
rs1477677092 2252 dbSNP
rs1165414002 2261 dbSNP
rs1043235 2268 dbSNP
rs561130450 2275 dbSNP
rs1015892516 2277 dbSNP
rs574836156 2284 dbSNP
rs971830077 2297 dbSNP
rs990839609 2306 dbSNP
rs1452580622 2311 dbSNP
rs34507581 2313 dbSNP
rs916646869 2314 dbSNP
rs143115509 2316 dbSNP
rs181747193 2325 dbSNP
rs918749571 2326 dbSNP
rs117779512 2329 dbSNP
rs1284774141 2332 dbSNP
rs1223842851 2338 dbSNP
rs1352128131 2343 dbSNP
rs1272747569 2345 dbSNP
rs918636951 2351 dbSNP
rs1304696078 2352 dbSNP
rs185457677 2362 dbSNP
rs1398145159 2363 dbSNP
rs1359808264 2366 dbSNP
rs1318819569 2374 dbSNP
rs1390067606 2374 dbSNP
rs112867627 2381 dbSNP
rs1423104086 2395 dbSNP
rs887582814 2400 dbSNP
rs775561225 2406 dbSNP
rs563167293 2408 dbSNP
rs1038914103 2413 dbSNP
rs557582988 2414 dbSNP
rs937604634 2423 dbSNP
rs1488284859 2426 dbSNP
rs777691656 2430 dbSNP
rs577414383 2441 dbSNP
rs900241854 2444 dbSNP
rs762877950 2445 dbSNP
rs1275864192 2455 dbSNP
rs1030369190 2459 dbSNP
rs1323799716 2461 dbSNP
rs548125656 2462 dbSNP
rs1216581732 2475 dbSNP
rs902182842 2478 dbSNP
rs1270731096 2480 dbSNP
rs1432750452 2483 dbSNP
rs1211227863 2486 dbSNP
rs1333559831 2493 dbSNP
rs768487862 2495 dbSNP
rs1408562295 2496 dbSNP
rs1032572980 2509 dbSNP
rs774439923 2520 dbSNP
rs1477715292 2524 dbSNP
rs567951291 2534 dbSNP
rs533820399 2540 dbSNP
rs1472076783 2562 dbSNP
rs761830033 2562 dbSNP
rs946108445 2566 dbSNP
rs1041856616 2567 dbSNP
rs1461330714 2569 dbSNP
rs901659858 2586 dbSNP
rs990936427 2587 dbSNP
rs1317092392 2589 dbSNP
rs997381886 2595 dbSNP
rs1478870721 2601 dbSNP
rs34881868 2604 dbSNP
rs1029260099 2605 dbSNP
rs547496077 2607 dbSNP
rs1043242 2611 dbSNP
rs1385002899 2618 dbSNP
rs868039291 2622 dbSNP
rs1006097988 2623 dbSNP
rs918549148 2636 dbSNP
rs189984591 2637 dbSNP
rs117644779 2640 dbSNP
rs1024752644 2644 dbSNP
rs1184678408 2651 dbSNP
rs970904166 2655 dbSNP
rs981607242 2671 dbSNP
rs1176450631 2673 dbSNP
rs927460273 2677 dbSNP
rs1271197060 2680 dbSNP
rs909114658 2680 dbSNP
rs937568141 2686 dbSNP
rs990438149 2690 dbSNP
rs914565896 2691 dbSNP
rs1319645267 2695 dbSNP
rs58561717 2698 dbSNP
rs901903065 2701 dbSNP
rs1361740329 2710 dbSNP
rs1038883331 2713 dbSNP
rs546381663 2715 dbSNP
rs1446404964 2721 dbSNP
rs921790436 2726 dbSNP
rs933028735 2727 dbSNP
rs1434767149 2728 dbSNP
rs1051533621 2732 dbSNP
rs140499593 2733 dbSNP
rs555674963 2738 dbSNP
rs1053415205 2741 dbSNP
rs1213368896 2751 dbSNP
rs574720057 2751 dbSNP
rs894055289 2754 dbSNP
rs1250817137 2768 dbSNP
rs1178512288 2773 dbSNP
rs1012494247 2775 dbSNP
rs993103020 2783 dbSNP
rs1355448082 2784 dbSNP
rs1024187097 2786 dbSNP
rs11544581 2788 dbSNP
rs970928094 2795 dbSNP
rs1490818309 2800 dbSNP
rs1219945179 2802 dbSNP
rs1265295175 2803 dbSNP
rs568006410 2806 dbSNP
rs1356379721 2807 dbSNP
rs1488593689 2809 dbSNP
rs1192787609 2810 dbSNP
rs1309462659 2812 dbSNP
rs1025077012 2817 dbSNP
rs540264086 2819 dbSNP
rs1407371341 2827 dbSNP
rs1274593661 2831 dbSNP
rs1426743449 2832 dbSNP
rs1025746731 2833 dbSNP
rs754158311 2835 dbSNP
rs1189958522 2837 dbSNP
rs1363835363 2839 dbSNP
rs951470301 2840 dbSNP
rs755456196 2841 dbSNP
rs1457763435 2854 dbSNP
rs34237673 2856 dbSNP
rs1162025391 2873 dbSNP
rs527277305 2875 dbSNP
rs1199859990 2880 dbSNP
rs1481261543 2881 dbSNP
rs868173144 2886 dbSNP
rs1204439345 2888 dbSNP
rs35778959 2890 dbSNP
rs1420865101 2897 dbSNP
rs984112676 2900 dbSNP
rs909922538 2901 dbSNP
rs1397252822 2902 dbSNP
rs142185959 2905 dbSNP
rs1225754686 2908 dbSNP
rs765689401 2909 dbSNP
rs1339476189 2925 dbSNP
rs2285547 2926 dbSNP
rs545944674 2937 dbSNP
rs933184692 2941 dbSNP
rs1052055529 2943 dbSNP
rs562948094 2944 dbSNP
rs1404913719 2946 dbSNP
rs866380281 2948 dbSNP
rs1215824287 2951 dbSNP
rs1258879937 2954 dbSNP
rs923272775 2961 dbSNP
rs1429018943 2965 dbSNP
rs1264030985 2967 dbSNP
rs1202215762 2975 dbSNP
rs1460884988 2976 dbSNP
rs780972281 2979 dbSNP
rs531970431 2980 dbSNP
rs1423481777 2982 dbSNP
rs542153415 2982 dbSNP
rs1181932472 2994 dbSNP
rs1251073060 2997 dbSNP
rs1228872959 3002 dbSNP
rs935118677 3003 dbSNP
rs1311130784 3010 dbSNP
rs368146627 3012 dbSNP
rs933418706 3012 dbSNP
rs150791567 3017 dbSNP
rs114946552 3018 dbSNP
rs1470738831 3019 dbSNP
rs1012419439 3026 dbSNP
rs547433271 3027 dbSNP
rs941894995 3029 dbSNP
rs1462486563 3030 dbSNP
rs763813214 3038 dbSNP
rs906671675 3039 dbSNP
rs1003697834 3042 dbSNP
rs755829987 3046 dbSNP
rs1185717334 3066 dbSNP
rs1456604753 3070 dbSNP
rs1037517699 3071 dbSNP
rs897719528 3075 dbSNP
rs1341822278 3077 dbSNP
rs570423757 3080 dbSNP
rs1005641829 3090 dbSNP
rs906228469 3091 dbSNP
rs1358166865 3094 dbSNP
rs539319608 3127 dbSNP
rs1400826242 3134 dbSNP
rs1016911065 3140 dbSNP
rs1454308964 3141 dbSNP
rs555968837 3144 dbSNP
rs1001951294 3146 dbSNP
rs975040407 3150 dbSNP
rs533064758 3151 dbSNP
rs749055960 3152 dbSNP
rs921852412 3153 dbSNP
rs867551330 3159 dbSNP
rs1165530311 3162 dbSNP
rs1437840836 3165 dbSNP
rs768597627 3166 dbSNP
rs1363440362 3175 dbSNP
rs954815139 3179 dbSNP
rs987315713 3181 dbSNP
rs1182750394 3185 dbSNP
rs1239152875 3189 dbSNP
rs1439941397 3190 dbSNP
rs774195576 3194 dbSNP
rs1313858518 3195 dbSNP
rs1291946374 3201 dbSNP
rs1210665304 3203 dbSNP
rs935045167 3211 dbSNP
rs1347842902 3212 dbSNP
rs1278625575 3216 dbSNP
rs181522565 3223 dbSNP
rs923290434 3231 dbSNP
rs1301035198 3248 dbSNP
rs1404315190 3251 dbSNP
rs954904161 3255 dbSNP
rs115497413 3256 dbSNP
rs1417969894 3260 dbSNP
rs1278205943 3262 dbSNP
rs947765248 3264 dbSNP
rs6005034 3265 dbSNP
rs1376352130 3269 dbSNP
rs906775307 3269 dbSNP
rs772199225 3270 dbSNP
rs543745259 3273 dbSNP
rs555357762 3273 dbSNP
rs1215038712 3274 dbSNP
rs113886812 3278 dbSNP
rs189775686 3282 dbSNP
rs1205401854 3284 dbSNP
rs773493136 3285 dbSNP
rs887280659 3300 dbSNP
rs929221431 3301 dbSNP
rs1046777711 3302 dbSNP
rs1222674624 3303 dbSNP
rs906183347 3307 dbSNP
rs180742984 3312 dbSNP
rs1017046453 3322 dbSNP
rs1325970028 3332 dbSNP
rs576884167 3343 dbSNP
rs893530993 3346 dbSNP
rs1404203523 3354 dbSNP
rs1175888626 3359 dbSNP
rs1470526137 3360 dbSNP
rs1431844348 3374 dbSNP
rs996843507 3378 dbSNP
rs1475358334 3383 dbSNP
rs1030112230 3389 dbSNP
rs1021761815 3393 dbSNP
rs903387625 3396 dbSNP
rs1260895892 3397 dbSNP
rs545881154 3398 dbSNP
rs556662389 3400 dbSNP
rs139209821 3403 dbSNP
rs955004470 3408 dbSNP
rs1361168815 3410 dbSNP
rs1030760925 3411 dbSNP
rs542447269 3414 dbSNP
rs1017569370 3421 dbSNP
rs1219743632 3422 dbSNP
rs1300429021 3425 dbSNP
rs989167022 3426 dbSNP
rs963393311 3431 dbSNP
rs1168755213 3433 dbSNP
rs766601466 3434 dbSNP
rs186271915 3440 dbSNP
rs528016223 3442 dbSNP
rs1450831100 3445 dbSNP
rs540981754 3452 dbSNP
rs939584755 3455 dbSNP
rs1043260 3459 dbSNP
rs1043264 3460 dbSNP
rs564082425 3463 dbSNP
rs1204047593 3464 dbSNP
rs1047357546 3467 dbSNP
rs1306646872 3470 dbSNP
rs11913346 3471 dbSNP
rs941489380 3483 dbSNP
rs535615292 3485 dbSNP
rs15127 3489 dbSNP
rs1268792730 3492 dbSNP
rs549608491 3494 dbSNP
rs555824996 3503 dbSNP
rs903333814 3506 dbSNP
rs148867912 3510 dbSNP
rs532791034 3510 dbSNP
rs569765648 3519 dbSNP
rs1030515198 3520 dbSNP
rs1355441807 3530 dbSNP
rs899904867 3539 dbSNP
rs997380699 3548 dbSNP
rs1172162824 3549 dbSNP
rs1423660097 3550 dbSNP
rs529045735 3559 dbSNP
rs1162372272 3567 dbSNP
rs1444642332 3574 dbSNP
rs1364657368 3578 dbSNP
rs1175067098 3580 dbSNP
rs1216757776 3580 dbSNP
rs1281626567 3580 dbSNP
rs1361867100 3580 dbSNP
rs137932565 3580 dbSNP
rs143569858 3580 dbSNP
rs369529613 3580 dbSNP
rs537439856 3580 dbSNP
rs548687400 3580 dbSNP
rs55778752 3580 dbSNP
rs747542713 3580 dbSNP
rs201239212 3583 dbSNP
rs1403710894 3590 dbSNP
rs891128848 3592 dbSNP
rs1365512594 3593 dbSNP
rs1167793936 3600 dbSNP
rs1008786615 3604 dbSNP
rs1351074247 3606 dbSNP
rs754346698 3606 dbSNP
rs781516829 3606 dbSNP
rs1156541042 3609 dbSNP
rs751109383 3613 dbSNP
rs1418125564 3614 dbSNP
rs1436911309 3615 dbSNP
rs58683340 3616 dbSNP
rs1408509774 3619 dbSNP
rs1292912045 3632 dbSNP
rs549180573 3639 dbSNP
rs1184070740 3643 dbSNP
rs3182906 3646 dbSNP
rs1479293041 3651 dbSNP
rs1268128158 3652 dbSNP
rs1223089662 3662 dbSNP
rs1489531358 3669 dbSNP
rs1343545638 3684 dbSNP
rs1007813459 3689 dbSNP
rs866595624 3696 dbSNP
rs956647113 3697 dbSNP
rs1215410213 3704 dbSNP
rs1317740708 3710 dbSNP
rs1280212930 3729 dbSNP
rs1222082314 3742 dbSNP
rs989261930 3746 dbSNP
rs1341141361 3747 dbSNP
rs1214220610 3756 dbSNP
rs1284519065 3762 dbSNP
rs1017558135 3763 dbSNP
rs1022119690 3768 dbSNP
rs1271131577 3770 dbSNP
rs1369164794 3780 dbSNP
rs969124244 3784 dbSNP
rs192129544 3786 dbSNP
rs927620862 3790 dbSNP
rs963378876 3802 dbSNP
rs960670712 3804 dbSNP
rs534611174 3808 dbSNP
rs982467327 3809 dbSNP
rs1200123196 3811 dbSNP
rs1434824973 3812 dbSNP
rs1026377557 3813 dbSNP
rs908780852 3815 dbSNP
rs1486202191 3816 dbSNP
rs1243669350 3819 dbSNP
rs372806940 3823 dbSNP
rs1201963714 3828 dbSNP
rs1323323655 3833 dbSNP
rs1264117480 3840 dbSNP
rs1474319586 3849 dbSNP
rs950846759 3854 dbSNP
rs759853972 3856 dbSNP
rs1295406237 3860 dbSNP
rs941626791 3862 dbSNP
rs765746358 3863 dbSNP
rs982323349 3875 dbSNP
rs1185662846 3879 dbSNP
rs927827080 3883 dbSNP
rs1038546663 3890 dbSNP
rs1467330161 3891 dbSNP
rs570506825 3899 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084044. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep3 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            | | ||||  :||||||| 
Target 5' ucUCCUGCCUCAGCCUCCCAa 3'
15 - 35
2
miRNA  3' ugacgucggaacuggAGGGUc 5'
                         |:| | 
Target 5' -----------ugagUUCAAg 3'
1 - 10
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084044
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep3
Location of target site ENST00000354336.3 | 3UTR | UGAGUUCAAGCGAUUCUCCUGCCUCAGCCUCCCAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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