miRTarBase - #MIRT678193


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pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CRCP   
Synonyms CGRP-RCP, CGRPRCP, RCP, RCP9
Description CGRP receptor component
Transcript NM_001040647   
Other Transcripts NM_001040648 , NM_001142414 , NM_014478   
Expression
Putative miRNA Targets on CRCP
3'UTR of CRCP
(miRNA target sites are highlighted)		 
>CRCP|NM_001040647|3'UTR
   1 AAGAGCACAGCTGGCCCCGGCGTTTCATGAAGTCAGAAGGCCTGGCAGCCATTTCCTGGACGTTGAGAGGATTGTTTATT
  81 TGATTTTTATCCTCATCCCAGCAGGCCTGGCTTTGTGGTTAGTTGGGTACATCACAAAAATAAGTTAAAAAGAAATATTT
 161 GTGCCTTGGGGAGAAGAAACATGGTGAAAACAGGCTGAGGTTGTCAGGGCAGAGAGCTGAAGGTGGGGACAGTGACCGCG
 241 GACCCCTCTGTGCTTGAAAGATTTCCTCCACGGCCTTTGCCCCAGTTGTGGGGAGGTCTCTGTGCACAGCGGGGAAAATG
 321 CTTGTGTCGCCTTTGGTGGGCCATGTCCTAATTAGTTTCATCTGCTTCCCTGGGAACTTACTAAGGGGCCCAGAGCACTG
 401 TTGGAAGTCTGGTTAGAGTCCCCAGAGAGTTACTCTAAGTTAAAATGAGCCACTGACCTTGGCTCACCTTAGAGGAATTT
 481 CCTCGAGAACAACAGAGATAAGAAAAGAACCGGCCTGGCCAATCCTTCAACAGCTCTAGAGCCCCTTTTCTCTGCTGGCA
 561 GGGGCTTTGTTTACCAGCTCACTGTTTAGGCTAAATGTTAGGGACCAGATCACTGCAGTTGAAAACGGGCACTCCAGGCT
 641 TAGTGACAGTGGCAGCAGAAACAGTGTTGGCTGCCTTTCTGACCACCCCACTTTCCTGCCCTGAGACAGCAGCCCAGGGC
 721 AGGTGCTTCATATTCAGACCAGGTAAGCCTCATTTGCACAACAGTCAAATTGTTTGTTCCTTTAAAAAGGACACAATTAG
 801 CCTGGCACGGTGACTCATGCTTGTAATCCCAGCACTTTGGGAGGGCAAGGCAGGCGGATCACCTGAGGTCAGGAGTTTGA
 881 GACCAGCCTCACCAACATGGAAAAACCCCATCTCTACTAAAAAAATACAAAATTAACCAGGGGTGATGGCACATTCCTGT
 961 AATCCCAGCTACTCGGGAGGCCGAGGCAGGAGAATCGCTTGAACCCGGGAGGCAGAGGTTGAGGTGAGCCAAGATTGCAC
1041 CATTGCACTCCAGCCTGGGCAACAAGAGCAAAACTTCATCTAAAAAACAGAAAATATTAAGATGATTACCATGTGAAAAC
1121 CTTTTTAATATTCAGGATTTGGAAAGTATAGTTGCCCCAGGCATGTGGTTGTTGCCTTAGGTCCTGCGAATATTGCTGAA
1201 AATCGGATTTTCCACATTCACTTTCTTCCCTGTTTTAGGGAAGAAAATGATCATAGACATTCGATTTTCCAAATTGGCGC
1281 TCTTATTTTCAATGCTAATTGGATTACTTCTCTTCCAACCCTCCTGCCCGTCCATCCATCCCAGTCCCCAGGCATCTTAA
1361 CCTTACCATCTGAGCTTCAGCTGAAATCTGTTTATAGGCAACATTGAAAGTACCAGATTGGGGCCAGGTGTAGCGGCCCA
1441 CACCTGTAATCCCAGCACTTTGGGAGGCGGAGGCTAGCGGATCATGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATG
1521 GTGAAACCCCCATCTCTACTAAAGATATAAAAAACTAGCCGAGCGTGGTGTTGCATGCCTGTGATCCCAGCTACTCGGGA
1601 GGCTGAGGCGGGGGAATCGCTTGAACCGGGGAGGCAGAGGTTGCAGTGAGCCAGATCGTGCATTGCACTCCAGCCTGGCC
1681 GACAGGGTGAGACTCCATCTCAAAAAAGAGAAAGTACCAGATTGTACTTTTAAATCTGTCTAGCGTATTGAGAATTTTAG
1761 TGGGAGCTGTTGATTTATTTCTCAGGGCATACATGTGCCAATCTGTCTCATTGTTGTCTCTCTCTTTTTTTTTTTTTTTT
1841 TTGAGACAGTCTCGCTGTGTTGCCCAGGAGTGCAGTGGCACGATCTCTGCTCACTGCAACCTCTGCCTCCCAGATTCAAG
1921 CGATTCTGGTGCCTTAGCCTCCTGAGTAGCTGGGACTTACAGGCACGTACCACTATACCCTGCTAAAATTTGTATTTTTA
2001 GTAGAGACAGGGTTTTGCCATATTGGCCAGGCTAGTCGTAATGTCTCTTTTTAACACTGAATATGTTAGGTGGTTTTTCT
2081 TGATGGATTTAGGGTTAACCTAGTTAATAATAAATTGTTTCCAGGTAATTATCAAGTTTTGTCATTTTATAAATCTGAAG
2161 AGTTAATATTGTCATCGATACAAATAAAGTGAAATCTGACTGAGGCTAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gguAGA--AGGAAGUCGGAg 5'
             |||  | | |:||||| 
Target 5' gatTCTGGTGCCTTAGCCTc 3'
 1922 - 1941 133.00 -14.50
2 
miRNA  3' gguagaaggaAGUCGGAg 5'
                    |:||||| 
Target 5' aaggacacaaTTAGCCTg 3'
 787 - 804 124.00 -8.10
3 
miRNA  3' ggUAGA-AGGAAGUCGGag 5'
            ||||   |||||||:  
Target 5' ccATCTGAGCTTCAGCTga 3'
 1366 - 1384 120.00 -17.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31600471 6 COSMIC
COSN30615380 21 COSMIC
COSN18719456 22 COSMIC
COSN30524137 61 COSMIC
COSN30495160 65 COSMIC
COSN31578092 86 COSMIC
COSN20064290 158 COSMIC
COSN9506246 386 COSMIC
COSN30175788 546 COSMIC
COSN15302897 628 COSMIC
COSN26556302 646 COSMIC
COSN17076218 1348 COSMIC
COSN17280886 1695 COSMIC
COSN32061343 1843 COSMIC
COSN14891954 1862 COSMIC
COSN17037528 2007 COSMIC
COSN18953201 2134 COSMIC
rs875971 252 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1357355973 3 dbSNP
rs749987614 6 dbSNP
rs754807926 8 dbSNP
rs1282258939 14 dbSNP
rs1488037087 15 dbSNP
rs1217428335 16 dbSNP
rs1266023283 17 dbSNP
rs1484963086 18 dbSNP
rs143456688 19 dbSNP
rs779924167 20 dbSNP
rs969034944 21 dbSNP
rs751502627 22 dbSNP
rs1164698429 23 dbSNP
rs541138195 28 dbSNP
rs1336931569 32 dbSNP
rs1418610244 41 dbSNP
rs903172974 45 dbSNP
rs781067936 52 dbSNP
rs557466509 56 dbSNP
rs1413017844 61 dbSNP
rs181793565 62 dbSNP
rs1356196665 63 dbSNP
rs983612140 69 dbSNP
rs765989328 75 dbSNP
rs762795573 77 dbSNP
rs1395901888 91 dbSNP
rs1399894743 98 dbSNP
rs1403701220 105 dbSNP
rs73699725 106 dbSNP
rs1342710718 108 dbSNP
rs1178005094 109 dbSNP
rs545696734 110 dbSNP
rs1237328019 132 dbSNP
rs562490900 144 dbSNP
rs1228601304 148 dbSNP
rs748143716 149 dbSNP
rs1247269253 153 dbSNP
rs942086780 157 dbSNP
rs1319407054 159 dbSNP
rs1037756125 164 dbSNP
rs1223980229 166 dbSNP
rs531499304 170 dbSNP
rs1023225686 192 dbSNP
rs575351642 194 dbSNP
rs922052143 200 dbSNP
rs755990168 201 dbSNP
rs147138211 217 dbSNP
rs1281794733 224 dbSNP
rs1015377073 230 dbSNP
rs1347057229 231 dbSNP
rs561713662 238 dbSNP
rs1485715119 239 dbSNP
rs890364364 240 dbSNP
rs999862152 241 dbSNP
rs1267891264 244 dbSNP
rs1487498027 246 dbSNP
rs114209437 251 dbSNP
rs875971 252 dbSNP
rs1010778624 253 dbSNP
rs570462940 256 dbSNP
rs1193589762 257 dbSNP
rs539483826 269 dbSNP
rs1023386939 272 dbSNP
rs910713851 273 dbSNP
rs548236904 274 dbSNP
rs969152476 280 dbSNP
rs1364783066 281 dbSNP
rs947596939 284 dbSNP
rs1358806230 285 dbSNP
rs770515570 285 dbSNP
rs1315009625 298 dbSNP
rs1436289497 301 dbSNP
rs1377974983 303 dbSNP
rs1175179903 311 dbSNP
rs2292936 312 dbSNP
rs1376081049 315 dbSNP
rs960297016 316 dbSNP
rs745482498 320 dbSNP
rs1057441861 325 dbSNP
rs537599976 329 dbSNP
rs2292937 330 dbSNP
rs535751630 334 dbSNP
rs1387775008 335 dbSNP
rs1383310338 344 dbSNP
rs1255769726 351 dbSNP
rs1208515911 353 dbSNP
rs186186866 361 dbSNP
rs777119968 366 dbSNP
rs1309757552 377 dbSNP
rs1323284235 384 dbSNP
rs1329733932 387 dbSNP
rs948635302 393 dbSNP
rs1295261094 398 dbSNP
rs1415623152 399 dbSNP
rs190509544 400 dbSNP
rs1302018354 401 dbSNP
rs138775484 407 dbSNP
rs535128829 409 dbSNP
rs1171307665 421 dbSNP
rs922001496 423 dbSNP
rs576222141 428 dbSNP
rs1423999259 429 dbSNP
rs1255106056 430 dbSNP
rs1180432843 434 dbSNP
rs1051685823 438 dbSNP
rs1259200734 457 dbSNP
rs911885072 464 dbSNP
rs935230710 466 dbSNP
rs142728057 476 dbSNP
rs893763877 478 dbSNP
rs867767219 482 dbSNP
rs946516689 485 dbSNP
rs1044950404 486 dbSNP
rs1029751822 490 dbSNP
rs1205664925 493 dbSNP
rs755277093 494 dbSNP
rs369369726 508 dbSNP
rs1449663185 509 dbSNP
rs577713213 512 dbSNP
rs1003314246 513 dbSNP
rs1017839865 515 dbSNP
rs1398079422 516 dbSNP
rs968828888 518 dbSNP
rs1439393871 520 dbSNP
rs1457989797 521 dbSNP
rs1156900029 523 dbSNP
rs1367492544 524 dbSNP
rs1034649931 531 dbSNP
rs1162265364 537 dbSNP
rs1420563613 545 dbSNP
rs1239166392 551 dbSNP
rs1454718611 555 dbSNP
rs1293463714 558 dbSNP
rs773195556 559 dbSNP
rs1003913976 571 dbSNP
rs1456807117 573 dbSNP
rs538915425 578 dbSNP
rs1355731916 581 dbSNP
rs1015587384 588 dbSNP
rs1241440389 594 dbSNP
rs963621538 596 dbSNP
rs763039523 600 dbSNP
rs956325029 603 dbSNP
rs1374508290 609 dbSNP
rs992959412 610 dbSNP
rs1327073219 614 dbSNP
rs563328071 617 dbSNP
rs144793361 618 dbSNP
rs1044326131 627 dbSNP
rs316305 628 dbSNP
rs1318226554 630 dbSNP
rs148551979 633 dbSNP
rs941152610 635 dbSNP
rs1397353432 641 dbSNP
rs1239601753 647 dbSNP
rs561927029 649 dbSNP
rs1200214490 651 dbSNP
rs527445169 657 dbSNP
rs1036870434 663 dbSNP
rs912016039 665 dbSNP
rs1207018471 670 dbSNP
rs1488729625 682 dbSNP
rs142911355 684 dbSNP
rs564208807 691 dbSNP
rs1351243858 696 dbSNP
rs889432655 699 dbSNP
rs79282496 713 dbSNP
rs199497946 717 dbSNP
rs746267991 735 dbSNP
rs569521772 743 dbSNP
rs758204430 744 dbSNP
rs1401331949 754 dbSNP
rs76817934 759 dbSNP
rs549371866 764 dbSNP
rs1164241609 775 dbSNP
rs1418190707 780 dbSNP
rs939046994 781 dbSNP
rs1404788373 795 dbSNP
rs1173598332 796 dbSNP
rs1056607800 797 dbSNP
rs1264138081 799 dbSNP
rs886899481 810 dbSNP
rs956270525 816 dbSNP
rs1478209762 817 dbSNP
rs1262667739 828 dbSNP
rs1367228974 831 dbSNP
rs1004266064 833 dbSNP
rs917371068 839 dbSNP
rs970437021 843 dbSNP
rs1166073525 844 dbSNP
rs1016628765 854 dbSNP
rs62465483 855 dbSNP
rs1464738674 856 dbSNP
rs1344151054 857 dbSNP
rs995067290 858 dbSNP
rs1219863490 861 dbSNP
rs1340610011 867 dbSNP
rs1277081496 873 dbSNP
rs777720510 876 dbSNP
rs1029084191 882 dbSNP
rs1335251445 885 dbSNP
rs909764052 888 dbSNP
rs941265859 889 dbSNP
rs1173465619 902 dbSNP
rs953540566 903 dbSNP
rs1015554251 908 dbSNP
rs1391454900 909 dbSNP
rs1422996103 915 dbSNP
rs987696265 918 dbSNP
rs1311475971 919 dbSNP
rs1473883646 920 dbSNP
rs918415140 922 dbSNP
rs749163116 923 dbSNP
rs1353454109 926 dbSNP
rs534935466 927 dbSNP
rs1441637324 931 dbSNP
rs1276347314 939 dbSNP
rs557923134 943 dbSNP
rs1318608390 944 dbSNP
rs889561444 951 dbSNP
rs956842919 953 dbSNP
rs1273529032 955 dbSNP
rs1043381764 956 dbSNP
rs988520249 965 dbSNP
rs1284461272 973 dbSNP
rs1447678713 975 dbSNP
rs1339094627 976 dbSNP
rs1333860576 981 dbSNP
rs577751899 983 dbSNP
rs915266374 984 dbSNP
rs1253279751 986 dbSNP
rs1481119801 989 dbSNP
rs1181320727 992 dbSNP
rs537128818 995 dbSNP
rs1168558793 997 dbSNP
rs182808311 998 dbSNP
rs1414719102 1000 dbSNP
rs756828231 1007 dbSNP
rs1241031633 1008 dbSNP
rs1031944789 1010 dbSNP
rs1458142121 1017 dbSNP
rs188186351 1021 dbSNP
rs891944466 1025 dbSNP
rs1323009371 1032 dbSNP
rs1290079035 1035 dbSNP
rs1227374588 1040 dbSNP
rs980689676 1041 dbSNP
rs1014438815 1051 dbSNP
rs1024788936 1064 dbSNP
rs970172857 1066 dbSNP
rs778279053 1072 dbSNP
rs980068157 1073 dbSNP
rs1438632726 1090 dbSNP
rs1323053208 1106 dbSNP
rs1403782826 1106 dbSNP
rs939177073 1113 dbSNP
rs1056321519 1120 dbSNP
rs542107145 1135 dbSNP
rs1016937435 1141 dbSNP
rs908274237 1143 dbSNP
rs190970226 1148 dbSNP
rs1462216479 1151 dbSNP
rs1489458585 1157 dbSNP
rs1301730424 1162 dbSNP
rs1489690376 1163 dbSNP
rs962744970 1164 dbSNP
rs939798577 1167 dbSNP
rs972627514 1173 dbSNP
rs1038420723 1179 dbSNP
rs572293676 1180 dbSNP
rs1293835538 1188 dbSNP
rs1339825935 1189 dbSNP
rs1212583254 1193 dbSNP
rs1434431593 1203 dbSNP
rs996503555 1205 dbSNP
rs28581829 1206 dbSNP
rs1420027624 1220 dbSNP
rs1209707285 1229 dbSNP
rs1359652994 1231 dbSNP
rs1278230885 1253 dbSNP
rs1156751713 1264 dbSNP
rs1434808203 1265 dbSNP
rs564249922 1274 dbSNP
rs1190079361 1276 dbSNP
rs1009467716 1278 dbSNP
rs1479170807 1279 dbSNP
rs903509531 1280 dbSNP
rs1216867951 1281 dbSNP
rs1487795796 1290 dbSNP
rs1019125996 1293 dbSNP
rs1474753874 1296 dbSNP
rs533081169 1298 dbSNP
rs956983322 1299 dbSNP
rs1009659364 1303 dbSNP
rs892068229 1306 dbSNP
rs1022273177 1311 dbSNP
rs1024487666 1319 dbSNP
rs968031267 1330 dbSNP
rs316306 1331 dbSNP
rs781691781 1334 dbSNP
rs748482270 1335 dbSNP
rs1392650965 1341 dbSNP
rs960684043 1348 dbSNP
rs992371204 1351 dbSNP
rs962691501 1364 dbSNP
rs770225105 1367 dbSNP
rs760998304 1375 dbSNP
rs939725594 1381 dbSNP
rs529815491 1398 dbSNP
rs538193043 1403 dbSNP
rs972746676 1404 dbSNP
rs1313027392 1409 dbSNP
rs1183925530 1419 dbSNP
rs1038077714 1424 dbSNP
rs1025943222 1435 dbSNP
rs563304490 1436 dbSNP
rs1428607218 1438 dbSNP
rs768167231 1445 dbSNP
rs543536882 1451 dbSNP
rs1218147976 1456 dbSNP
rs1305943748 1458 dbSNP
rs528837290 1468 dbSNP
rs889339843 1469 dbSNP
rs987156678 1473 dbSNP
rs1009171756 1480 dbSNP
rs1450317900 1481 dbSNP
rs1402432117 1482 dbSNP
rs1170713191 1485 dbSNP
rs1218796110 1486 dbSNP
rs1464678533 1492 dbSNP
rs1370919935 1503 dbSNP
rs1166491158 1513 dbSNP
rs1301536894 1514 dbSNP
rs1255904448 1519 dbSNP
rs1040906351 1526 dbSNP
rs568187238 1527 dbSNP
rs979136259 1531 dbSNP
rs548165174 1548 dbSNP
rs1267360607 1549 dbSNP
rs575727069 1549 dbSNP
rs1321391082 1564 dbSNP
rs892645082 1565 dbSNP
rs143637899 1566 dbSNP
rs1445755230 1569 dbSNP
rs1022384107 1578 dbSNP
rs968146870 1581 dbSNP
rs759457228 1583 dbSNP
rs1390253912 1588 dbSNP
rs1002190086 1589 dbSNP
rs934976133 1595 dbSNP
rs1458072653 1597 dbSNP
rs1367585784 1598 dbSNP
rs1052112040 1602 dbSNP
rs1476044309 1605 dbSNP
rs1381409217 1610 dbSNP
rs35288506 1610 dbSNP
rs763365966 1610 dbSNP
rs566286049 1611 dbSNP
rs960883441 1614 dbSNP
rs370847277 1619 dbSNP
rs992092370 1620 dbSNP
rs1210561484 1621 dbSNP
rs908337442 1625 dbSNP
rs1250748857 1627 dbSNP
rs961233985 1628 dbSNP
rs1455337348 1629 dbSNP
rs1238241276 1630 dbSNP
rs906013421 1632 dbSNP
rs1302741089 1638 dbSNP
rs1364492658 1644 dbSNP
rs1300917926 1645 dbSNP
rs1173689860 1650 dbSNP
rs1361561782 1651 dbSNP
rs1379178206 1652 dbSNP
rs771100813 1658 dbSNP
rs1398835872 1659 dbSNP
rs919665888 1661 dbSNP
rs1469033762 1667 dbSNP
rs1001733440 1669 dbSNP
rs769677861 1678 dbSNP
rs1432678446 1679 dbSNP
rs932417325 1681 dbSNP
rs774357914 1682 dbSNP
rs759760553 1687 dbSNP
rs994540763 1688 dbSNP
rs1435474966 1698 dbSNP
rs1025635541 1703 dbSNP
rs955598551 1704 dbSNP
rs1323728148 1708 dbSNP
rs1257724312 1720 dbSNP
rs1233264128 1725 dbSNP
rs528746008 1728 dbSNP
rs1344301946 1735 dbSNP
rs146772680 1746 dbSNP
rs1401424586 1748 dbSNP
rs571481964 1750 dbSNP
rs1318013249 1757 dbSNP
rs1129531 1761 dbSNP
rs963817047 1765 dbSNP
rs1173686476 1772 dbSNP
rs892748320 1778 dbSNP
rs924995563 1788 dbSNP
rs956463856 1790 dbSNP
rs945506730 1794 dbSNP
rs1478259886 1795 dbSNP
rs1043945176 1796 dbSNP
rs1129532 1798 dbSNP
rs903909123 1802 dbSNP
rs1225909525 1804 dbSNP
rs1445076661 1806 dbSNP
rs1258074100 1808 dbSNP
rs756598729 1810 dbSNP
rs1322780874 1813 dbSNP
rs1421085744 1817 dbSNP
rs1219956602 1822 dbSNP
rs1318122076 1825 dbSNP
rs1335356689 1825 dbSNP
rs138993929 1825 dbSNP
rs749363558 1825 dbSNP
rs767773387 1825 dbSNP
rs1491474806 1826 dbSNP
rs557126766 1827 dbSNP
rs1033639264 1828 dbSNP
rs896493734 1830 dbSNP
rs1255336606 1842 dbSNP
rs1473933374 1843 dbSNP
rs773564797 1843 dbSNP
rs1027509552 1844 dbSNP
rs1231747128 1845 dbSNP
rs182805986 1846 dbSNP
rs1460777065 1849 dbSNP
rs1241230258 1855 dbSNP
rs1470799122 1857 dbSNP
rs2460427 1862 dbSNP
rs1408627190 1863 dbSNP
rs536288331 1865 dbSNP
rs1460895421 1866 dbSNP
rs1358079168 1875 dbSNP
rs917591049 1880 dbSNP
rs1381181000 1882 dbSNP
rs1162508701 1883 dbSNP
rs117490174 1889 dbSNP
rs1326975378 1892 dbSNP
rs1129541 1894 dbSNP
rs1407269311 1895 dbSNP
rs1129542 1899 dbSNP
rs1391749713 1902 dbSNP
rs1163936613 1915 dbSNP
rs1443783596 1922 dbSNP
rs1462128736 1923 dbSNP
rs572396572 1927 dbSNP
rs541303781 1929 dbSNP
rs1140143 1933 dbSNP
rs949098444 1940 dbSNP
rs187467471 1947 dbSNP
rs1129546 1949 dbSNP
rs1015492356 1961 dbSNP
rs961620758 1967 dbSNP
rs973848880 1968 dbSNP
rs1222131955 1971 dbSNP
rs1357763289 1971 dbSNP
rs1312000768 1979 dbSNP
rs1241463042 1981 dbSNP
rs760516665 1982 dbSNP
rs1373308851 1986 dbSNP
rs1277799141 1988 dbSNP
rs1438739638 1991 dbSNP
rs1026796402 1993 dbSNP
rs1129529 2001 dbSNP
rs953758676 2002 dbSNP
rs577871886 2003 dbSNP
rs1129547 2004 dbSNP
rs912336794 2007 dbSNP
rs1335910869 2013 dbSNP
rs927545376 2018 dbSNP
rs937451759 2019 dbSNP
rs1038553886 2020 dbSNP
rs1047476 2023 dbSNP
rs1213860098 2024 dbSNP
rs543508069 2028 dbSNP
rs994258840 2031 dbSNP
rs1478728932 2033 dbSNP
rs1269086297 2038 dbSNP
rs563287344 2039 dbSNP
rs1216981176 2042 dbSNP
rs1205974444 2047 dbSNP
rs1233004903 2048 dbSNP
rs1316800903 2058 dbSNP
rs1474814111 2063 dbSNP
rs1282773186 2067 dbSNP
rs1220962024 2073 dbSNP
rs1368377880 2083 dbSNP
rs914144310 2088 dbSNP
rs1419675056 2089 dbSNP
rs945622315 2100 dbSNP
rs192514553 2101 dbSNP
rs1167172276 2112 dbSNP
rs1342670345 2118 dbSNP
rs184596184 2119 dbSNP
rs1431247901 2121 dbSNP
rs559280849 2124 dbSNP
rs1344468488 2125 dbSNP
rs766154326 2130 dbSNP
rs1411913137 2132 dbSNP
rs1329565418 2133 dbSNP
rs1156859245 2137 dbSNP
rs1416165131 2141 dbSNP
rs1008658059 2159 dbSNP
rs938043886 2167 dbSNP
rs552418974 2169 dbSNP
rs896587676 2172 dbSNP
rs1013575554 2173 dbSNP
rs1187401873 2180 dbSNP
rs528783000 2189 dbSNP
rs1016024792 2196 dbSNP
rs1240778617 2204 dbSNP
rs1218402433 2211 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084042. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep2 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gguagaagGAAGUCGGAg 5'
                  | ||||||| 
Target 5' -uugcccaCCUCAGCCUc 3'
 		1 - 17
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084042
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep2
Location of target site ENST00000415001.2 | 3UTR | UUGCCCACCUCAGCCUCCCAAAGUGCUGGGAUUACA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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