pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol RMDN1   
Synonyms CGI-90, FAM82B, RMD-1, RMD1
Description regulator of microtubule dynamics 1
Transcript NM_016033   
Expression
Putative miRNA Targets on RMDN1
3'UTR of RMDN1
(miRNA target sites are highlighted)
>RMDN1|NM_016033|3'UTR
   1 GAACTTTTCAGAGAAGATTTATGAAATAGCTAATAAACATTGCCTTTTCTTTTAATTCTAAACTTAATATATGAACTATA
  81 ACTGTTCTACGGCTTTTTAAATGTTGTGACCATTTAACCGTGTAAATATAAAATATTCTAGGCTTCTTCACAAATAATAG
 161 GGTAAAATAAATAATCGCCATAAGAGTGGTAGAAATAAATCTCCATGGCTCAGGCAAAGAGATTATTTTGCATCCTGGAT
 241 ACCAGCAATGCAAAATGGTATGAGATTTCTAAGGATTGATCACATTGGGATGGGAGATCAAGCAAAGAAATATTTGTAGA
 321 GGAGGGGAAATGGATCTATAGGGGATATACAGGGGGATGGATTTTCAAATTGGATTGATTCTAAGTTGAAATCTTGAAGA
 401 GAAGGTGTGGTGACAGTGGTTAGGATGTTGTGGGTTCCTGACATAAAGTAGTTAAATGATATATCTTGGAGCTAACCTGT
 481 GTAAGTAAAGAACTAAGTAAGGAGATGACTAAAAATGGAGTAGTTTCCTTTTTTATTTTTTTGAGACAGAGTCTCACTTT
 561 GTTTCCCAGGCTGGTGTGCAGTGGCACAATCTCGGCCCACTGCAGCCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCT
 641 TAGCCTCCTGAGTGGCTGGGATTACAGGGTTGTACCACCACACTCGGCTAACTTTTGTATTTTTGGTAGAGATGGGGTTT
 721 TGCCATGTTGGCTAGGCTGGTCTCAAACTCCTGGCCTCAAGTGATCTGCCCGCCTTGGCCTCCCAAATTGCTGGGATTAC
 801 AGGCGTGAGCCACCGCACCTGGCCAGTTTACTTTAAATGTGGTGTAGTCTCATGGTAAACTGAATTTGTCATCAGATGCA
 881 AAGTTCTATTCCCTAATGGAATGGAAGGAACACAAAACTTAAGAGTGAAATGGAATACTAAGATGTTTTTAAATAGGCAG
 961 GACTATGCTACTCACTTGAGGCTGGAGTGCCACCACTGCAAAATCTTTTTAAGTTTTGTAAAAAGGAGCATCTTGAATCC
1041 ACTTAGATAAAGACAGACTGTGTGTGTAGGTGGATTTTTCCCAAAGGATTTGGGAATTGTAATGTTACAATGAACTGTAT
1121 GGATATGTTTGTCATGTACATTTTCAAACAAAAAGGAAAACTGAAAGTAGTGATCTTTGTATACCCATCTCTTAGATTCA
1201 GTGATTTTGCTATATAGGTTGTGTATCCCTTATCTGAAATACTTGGGACTAGTAGAAGCATCTTGGATTTGGGATGTTTT
1281 TCCAAATTTTGGAATACCTGCATACACACAATAAGATATCTTGGAGATGGGACCCAAGTTTAAACACAAATTCACTTGTT
1361 TCATATATACCTTATGCACATAGCTTGAAGGTAACTTTATATAACATTATTTTTAATAATTTTGTGCATTGAGACCAAGT
1441 TTGCATACCTTGAACCATCAGAAAGCAAAGGTGTCATTATCTCAGCCACTCATGTGGGTAATTTGTGGTTGGTTGATGTC
1521 ACCATCATTCCTGACTGAATGTATATGCTACCAATAAGCAGTTATTTTCTTATACTTATTCATGCATAAGTACTTAACAG
1601 TAAAAAATATGACATAACTCGCACAGGAACAAGGATGGCAAAAAAAAAAATATGACACACCACTGATACAGTGAAAAAAT
1681 AATGTGGTCAGGGTAGCTAGGCAACAGTAGCATCACCAGAAACCTGTATCAGCTGTTAAACGGCAACAACAATGGCAGGC
1761 TTTCAGTTTCCCACTTAATGATGCTGTATTTTAAAAGGTTATTGTATACTGTAATTTTATTTTTGTAGGTGAAGAGAAAC
1841 AGAAGCAGCTGAAGGGCCAGGAAGTGGGTCTTTCTAGGGATGTGGCATTCTGCTGGATGGCTTTTTAAAATGGGTTTTTT
1921 CCTTTAGGGAGACCGAATAAACTGTGTTGTGCACCTGCA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugAC-GUCGGAACUGGAGGGUc 5'
            || | ||||||:||||||| 
Target 5' tcTGCCCGCCTTGGCCTCCCAa 3'
765 - 786 175.00 -31.10
2
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            ||||||||  :||||||: 
Target 5' acTGCAGCCTCCGCCTCCCGg 3'
599 - 619 159.00 -34.60
3
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            | | ||||| :|||||:: 
Target 5' tcTCCTGCCTTAGCCTCCTGa 3'
631 - 651 135.00 -19.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN9271256 40 COSMIC
COSN30725819 59 COSMIC
COSN30148762 64 COSMIC
COSN30102194 85 COSMIC
COSN14356064 90 COSMIC
COSN31613399 91 COSMIC
COSN30113257 95 COSMIC
COSN31592232 177 COSMIC
COSN20091834 185 COSMIC
COSN2295080 297 COSMIC
COSN1369202 367 COSMIC
COSN22199224 600 COSMIC
COSN8106976 1317 COSMIC
COSN17785359 1366 COSMIC
COSN16748952 1413 COSMIC
COSN20070362 1640 COSMIC
COSN17248612 1693 COSMIC
COSN28614959 1868 COSMIC
COSN9684982 1875 COSMIC
COSN28202044 1945 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs757201432 1 dbSNP
rs1485262180 2 dbSNP
rs776351542 6 dbSNP
rs768253742 7 dbSNP
rs985876435 9 dbSNP
rs141097923 10 dbSNP
rs780093211 11 dbSNP
rs777257336 17 dbSNP
rs1169578995 18 dbSNP
rs771370313 18 dbSNP
rs1037100655 20 dbSNP
rs771934598 21 dbSNP
rs1361391946 23 dbSNP
rs183471936 26 dbSNP
rs1450261674 30 dbSNP
rs1407534734 33 dbSNP
rs1176320630 34 dbSNP
rs973699531 35 dbSNP
rs1468630469 41 dbSNP
rs779210519 42 dbSNP
rs1170724218 44 dbSNP
rs757478501 45 dbSNP
rs755592721 48 dbSNP
rs1385416625 50 dbSNP
rs1015565178 53 dbSNP
rs909879475 54 dbSNP
rs932671872 54 dbSNP
rs984046326 54 dbSNP
rs1256475741 60 dbSNP
rs921161871 63 dbSNP
rs1199364859 68 dbSNP
rs368544897 71 dbSNP
rs977102680 78 dbSNP
rs1488133798 82 dbSNP
rs192936110 83 dbSNP
rs1269172385 88 dbSNP
rs1480672577 89 dbSNP
rs187643745 90 dbSNP
rs1421024415 91 dbSNP
rs971424072 97 dbSNP
rs1024380869 99 dbSNP
rs758013779 101 dbSNP
rs1466691140 107 dbSNP
rs1031959061 108 dbSNP
rs1348837163 108 dbSNP
rs1303795553 109 dbSNP
rs977159183 110 dbSNP
rs959101774 111 dbSNP
rs1346537036 118 dbSNP
rs868122540 119 dbSNP
rs1342633940 138 dbSNP
rs567755508 140 dbSNP
rs1327983111 142 dbSNP
rs1410322069 148 dbSNP
rs1000821257 160 dbSNP
rs1021388409 161 dbSNP
rs1012566151 162 dbSNP
rs903437282 175 dbSNP
rs369781795 176 dbSNP
rs752352194 177 dbSNP
rs1267215720 180 dbSNP
rs1008509072 181 dbSNP
rs148201605 186 dbSNP
rs1260541695 187 dbSNP
rs145753242 195 dbSNP
rs906699227 205 dbSNP
rs1200894597 206 dbSNP
rs1421613636 206 dbSNP
rs1167446597 213 dbSNP
rs931765245 216 dbSNP
rs1419428968 221 dbSNP
rs562657659 235 dbSNP
rs920389982 242 dbSNP
rs1296767700 256 dbSNP
rs1375000707 258 dbSNP
rs1362888604 259 dbSNP
rs377264559 261 dbSNP
rs940202152 264 dbSNP
rs1283879481 265 dbSNP
rs1377055650 267 dbSNP
rs752612609 271 dbSNP
rs1230103046 276 dbSNP
rs1316999197 278 dbSNP
rs1360115098 292 dbSNP
rs1037544859 296 dbSNP
rs1239388684 300 dbSNP
rs940560188 302 dbSNP
rs1204346549 303 dbSNP
rs907788211 307 dbSNP
rs1283599391 308 dbSNP
rs982056742 310 dbSNP
rs1048473339 312 dbSNP
rs1236539695 317 dbSNP
rs1260330645 318 dbSNP
rs971366996 324 dbSNP
rs1183120308 325 dbSNP
rs1323391495 326 dbSNP
rs553885440 336 dbSNP
rs1220988122 338 dbSNP
rs183164396 341 dbSNP
rs1279178755 348 dbSNP
rs1443134955 352 dbSNP
rs1333675458 354 dbSNP
rs958823861 356 dbSNP
rs1334398419 359 dbSNP
rs1337438466 366 dbSNP
rs4961193 369 dbSNP
rs766230690 377 dbSNP
rs113502404 380 dbSNP
rs1307082767 381 dbSNP
rs1352491399 395 dbSNP
rs1020479731 402 dbSNP
rs1178014658 405 dbSNP
rs1224144219 405 dbSNP
rs1398445806 413 dbSNP
rs1406865916 416 dbSNP
rs1205218800 421 dbSNP
rs1009122476 424 dbSNP
rs761026780 425 dbSNP
rs890091327 427 dbSNP
rs1050105748 439 dbSNP
rs1177304752 448 dbSNP
rs996291677 461 dbSNP
rs1177437094 465 dbSNP
rs924559124 468 dbSNP
rs1470921234 471 dbSNP
rs898914109 473 dbSNP
rs1240439492 476 dbSNP
rs1182111117 477 dbSNP
rs560459578 478 dbSNP
rs1172381268 479 dbSNP
rs556414816 481 dbSNP
rs1264301869 486 dbSNP
rs1177502123 492 dbSNP
rs1212409410 498 dbSNP
rs1399640613 499 dbSNP
rs147245580 502 dbSNP
rs574850929 509 dbSNP
rs567510538 516 dbSNP
rs1379328098 522 dbSNP
rs1312706981 523 dbSNP
rs958381333 529 dbSNP
rs907731005 533 dbSNP
rs1035805355 535 dbSNP
rs776011859 535 dbSNP
rs1383520379 540 dbSNP
rs1046321060 543 dbSNP
rs1263445981 543 dbSNP
rs201924437 545 dbSNP
rs949294717 552 dbSNP
rs1275659306 555 dbSNP
rs906745430 556 dbSNP
rs917219403 561 dbSNP
rs772095129 570 dbSNP
rs555024325 575 dbSNP
rs768112560 581 dbSNP
rs1479249073 585 dbSNP
rs369512848 589 dbSNP
rs1200323425 593 dbSNP
rs748250006 594 dbSNP
rs1402136817 597 dbSNP
rs1464086404 597 dbSNP
rs958996741 604 dbSNP
rs1397350889 605 dbSNP
rs562858388 610 dbSNP
rs544669289 611 dbSNP
rs926051007 617 dbSNP
rs555888558 618 dbSNP
rs967496531 629 dbSNP
rs1020423825 636 dbSNP
rs888641983 637 dbSNP
rs1271413056 647 dbSNP
rs1339556866 649 dbSNP
rs1209769036 654 dbSNP
rs559049525 658 dbSNP
rs1244068861 666 dbSNP
rs1048443304 670 dbSNP
rs1184119908 672 dbSNP
rs538855304 676 dbSNP
rs987651043 681 dbSNP
rs997379165 683 dbSNP
rs1476947618 685 dbSNP
rs954961811 686 dbSNP
rs1029699796 687 dbSNP
rs1472547576 694 dbSNP
rs1162512821 698 dbSNP
rs760157862 699 dbSNP
rs995850426 701 dbSNP
rs1426259694 705 dbSNP
rs142086131 709 dbSNP
rs1359721988 710 dbSNP
rs1397737311 725 dbSNP
rs1041408711 726 dbSNP
rs535967773 729 dbSNP
rs375646835 744 dbSNP
rs1282893517 746 dbSNP
rs1362263050 748 dbSNP
rs886241843 750 dbSNP
rs1046270572 759 dbSNP
rs1285725800 761 dbSNP
rs949242792 765 dbSNP
rs895060619 766 dbSNP
rs565738490 771 dbSNP
rs13257574 772 dbSNP
rs1380490427 773 dbSNP
rs1446335319 777 dbSNP
rs1164201432 779 dbSNP
rs1361158982 780 dbSNP
rs1288986160 782 dbSNP
rs1417641367 791 dbSNP
rs1041670073 802 dbSNP
rs1363395655 804 dbSNP
rs1394907268 805 dbSNP
rs1331588312 807 dbSNP
rs947191619 810 dbSNP
rs1453973677 812 dbSNP
rs757080470 814 dbSNP
rs191026263 815 dbSNP
rs748911803 825 dbSNP
rs1167292355 830 dbSNP
rs958736284 836 dbSNP
rs1344613294 837 dbSNP
rs1198985793 842 dbSNP
rs532130692 844 dbSNP
rs1245033194 847 dbSNP
rs1427306816 852 dbSNP
rs928414722 855 dbSNP
rs777876326 860 dbSNP
rs1419383427 863 dbSNP
rs1161061219 864 dbSNP
rs1364207599 866 dbSNP
rs946143105 870 dbSNP
rs1489303599 875 dbSNP
rs1407649669 880 dbSNP
rs1469871939 888 dbSNP
rs1331195759 893 dbSNP
rs961748808 897 dbSNP
rs1015783162 916 dbSNP
rs547788205 919 dbSNP
rs1004443137 920 dbSNP
rs1330933711 922 dbSNP
rs1231335261 923 dbSNP
rs1265240646 924 dbSNP
rs1222028524 926 dbSNP
rs531398833 939 dbSNP
rs913364516 942 dbSNP
rs150047342 944 dbSNP
rs1479600596 958 dbSNP
rs1178931758 960 dbSNP
rs1027143361 961 dbSNP
rs997032647 962 dbSNP
rs899874912 963 dbSNP
rs568855192 965 dbSNP
rs1041152736 968 dbSNP
rs1008617448 973 dbSNP
rs1352298424 975 dbSNP
rs1463956710 978 dbSNP
rs757964640 978 dbSNP
rs1343099247 980 dbSNP
rs59550331 980 dbSNP
rs954911383 985 dbSNP
rs1285380949 990 dbSNP
rs1346420624 996 dbSNP
rs1181812709 997 dbSNP
rs1276363176 998 dbSNP
rs1309399452 999 dbSNP
rs1041638818 1001 dbSNP
rs1251820358 1002 dbSNP
rs1029236501 1004 dbSNP
rs947325860 1008 dbSNP
rs975426821 1009 dbSNP
rs1405199774 1011 dbSNP
rs1490401553 1011 dbSNP
rs963051075 1013 dbSNP
rs1392410344 1015 dbSNP
rs146350233 1018 dbSNP
rs1171669366 1026 dbSNP
rs1460786236 1028 dbSNP
rs544580927 1044 dbSNP
rs1368422552 1046 dbSNP
rs1354531447 1050 dbSNP
rs141828842 1052 dbSNP
rs6471354 1054 dbSNP
rs1287409812 1059 dbSNP
rs1004598695 1066 dbSNP
rs1364083337 1068 dbSNP
rs981241988 1072 dbSNP
rs199551582 1083 dbSNP
rs1296143223 1084 dbSNP
rs112917791 1086 dbSNP
rs764979978 1102 dbSNP
rs1293643847 1106 dbSNP
rs1024768427 1108 dbSNP
rs1490468367 1109 dbSNP
rs1013416483 1110 dbSNP
rs895000475 1119 dbSNP
rs543916063 1122 dbSNP
rs1486533954 1133 dbSNP
rs1269730871 1134 dbSNP
rs982987796 1136 dbSNP
rs560404731 1141 dbSNP
rs1480193909 1146 dbSNP
rs1134059 1149 dbSNP
rs1251603569 1153 dbSNP
rs1200484028 1159 dbSNP
rs11539112 1163 dbSNP
rs1443306245 1168 dbSNP
rs182771182 1168 dbSNP
rs530018611 1177 dbSNP
rs1321270751 1179 dbSNP
rs1282138934 1195 dbSNP
rs952930881 1197 dbSNP
rs1223563356 1208 dbSNP
rs1157116001 1211 dbSNP
rs904489583 1221 dbSNP
rs1332533013 1222 dbSNP
rs1302305403 1224 dbSNP
rs1304399957 1225 dbSNP
rs1380737943 1236 dbSNP
rs1450339538 1246 dbSNP
rs1027195651 1258 dbSNP
rs1043042769 1267 dbSNP
rs753540368 1271 dbSNP
rs964258776 1278 dbSNP
rs1467665796 1286 dbSNP
rs1318317704 1299 dbSNP
rs191246122 1300 dbSNP
rs374119861 1303 dbSNP
rs987547228 1305 dbSNP
rs544271344 1307 dbSNP
rs146977029 1309 dbSNP
rs574279507 1309 dbSNP
rs1379383165 1311 dbSNP
rs575642447 1313 dbSNP
rs1008335253 1316 dbSNP
rs922114988 1319 dbSNP
rs903182049 1323 dbSNP
rs974991884 1331 dbSNP
rs963970622 1333 dbSNP
rs1175876715 1338 dbSNP
rs1410666374 1362 dbSNP
rs766581442 1363 dbSNP
rs1253081160 1365 dbSNP
rs1418680045 1368 dbSNP
rs1238582305 1369 dbSNP
rs761128373 1373 dbSNP
rs1011594437 1375 dbSNP
rs1338572471 1391 dbSNP
rs950396690 1394 dbSNP
rs565212965 1401 dbSNP
rs1262433233 1409 dbSNP
rs1203821263 1423 dbSNP
rs1346527170 1425 dbSNP
rs1013364749 1429 dbSNP
rs1277538182 1436 dbSNP
rs1375337445 1439 dbSNP
rs1258367021 1448 dbSNP
rs1262129162 1454 dbSNP
rs1237919077 1462 dbSNP
rs545519816 1471 dbSNP
rs1310515151 1481 dbSNP
rs937156160 1489 dbSNP
rs1381296686 1490 dbSNP
rs1203093910 1491 dbSNP
rs772935829 1494 dbSNP
rs1033939253 1500 dbSNP
rs1397051694 1502 dbSNP
rs1000750690 1505 dbSNP
rs903767756 1511 dbSNP
rs907056631 1513 dbSNP
rs1177205097 1514 dbSNP
rs1399709927 1539 dbSNP
rs1042320680 1540 dbSNP
rs186389531 1541 dbSNP
rs1355997215 1550 dbSNP
rs553176125 1552 dbSNP
rs1442682136 1553 dbSNP
rs1282188323 1558 dbSNP
rs907638145 1568 dbSNP
rs145242082 1573 dbSNP
rs891823081 1574 dbSNP
rs1381115413 1579 dbSNP
rs747590485 1583 dbSNP
rs1213318486 1594 dbSNP
rs769580274 1596 dbSNP
rs531580744 1609 dbSNP
rs1222259074 1613 dbSNP
rs72690414 1618 dbSNP
rs922088428 1621 dbSNP
rs13042 1624 dbSNP
rs1474471715 1628 dbSNP
rs556070466 1628 dbSNP
rs1166031159 1630 dbSNP
rs1259084974 1635 dbSNP
rs1421592673 1639 dbSNP
rs1204014499 1640 dbSNP
rs1019819950 1642 dbSNP
rs987282266 1649 dbSNP
rs942251287 1650 dbSNP
rs1224626599 1651 dbSNP
rs1239110640 1651 dbSNP
rs1406379808 1651 dbSNP
rs528786009 1651 dbSNP
rs967424744 1651 dbSNP
rs1340640869 1653 dbSNP
rs1287700961 1654 dbSNP
rs1245951652 1659 dbSNP
rs1243247203 1664 dbSNP
rs1357744360 1665 dbSNP
rs1314746754 1669 dbSNP
rs909455015 1669 dbSNP
rs1261317443 1682 dbSNP
rs1246189935 1684 dbSNP
rs1195454569 1689 dbSNP
rs893157072 1692 dbSNP
rs1034660445 1693 dbSNP
rs1162912915 1694 dbSNP
rs1383149775 1720 dbSNP
rs1342756922 1722 dbSNP
rs568866922 1724 dbSNP
rs1426321834 1726 dbSNP
rs1001496596 1727 dbSNP
rs1316358617 1736 dbSNP
rs749404728 1741 dbSNP
rs1361481143 1744 dbSNP
rs527806185 1747 dbSNP
rs917607866 1750 dbSNP
rs1313564790 1752 dbSNP
rs1385369229 1753 dbSNP
rs1247204137 1755 dbSNP
rs991874889 1758 dbSNP
rs1260318849 1765 dbSNP
rs1318242567 1770 dbSNP
rs1348765707 1775 dbSNP
rs551948590 1777 dbSNP
rs779769369 1778 dbSNP
rs1460981176 1780 dbSNP
rs760975134 1780 dbSNP
rs1408902985 1781 dbSNP
rs1183134101 1785 dbSNP
rs775813564 1798 dbSNP
rs959386900 1800 dbSNP
rs886165431 1802 dbSNP
rs538746986 1804 dbSNP
rs1446177442 1805 dbSNP
rs1187963015 1808 dbSNP
rs1363063449 1809 dbSNP
rs754055066 1810 dbSNP
rs1242516426 1811 dbSNP
rs1201622283 1812 dbSNP
rs1411982824 1817 dbSNP
rs1458940189 1818 dbSNP
rs1001101017 1826 dbSNP
rs148886826 1828 dbSNP
rs1384973515 1829 dbSNP
rs1468849288 1831 dbSNP
rs1335260785 1833 dbSNP
rs1307176740 1843 dbSNP
rs1385665919 1844 dbSNP
rs921640697 1848 dbSNP
rs1293677112 1849 dbSNP
rs1230156215 1850 dbSNP
rs976067940 1851 dbSNP
rs1355712278 1852 dbSNP
rs770582967 1855 dbSNP
rs1020811604 1858 dbSNP
rs1452685860 1859 dbSNP
rs1383612948 1860 dbSNP
rs1280362504 1861 dbSNP
rs942999908 1864 dbSNP
rs1451021550 1866 dbSNP
rs1402932654 1867 dbSNP
rs13282351 1868 dbSNP
rs986929436 1878 dbSNP
rs1461766576 1880 dbSNP
rs1371029211 1881 dbSNP
rs891771076 1892 dbSNP
rs1020354003 1893 dbSNP
rs72690413 1897 dbSNP
rs997568408 1901 dbSNP
rs1441428831 1907 dbSNP
rs1251117188 1910 dbSNP
rs1195060236 1911 dbSNP
rs1479529540 1912 dbSNP
rs1034386667 1914 dbSNP
rs537747469 1921 dbSNP
rs577609599 1933 dbSNP
rs758480242 1934 dbSNP
rs561164711 1935 dbSNP
rs1303596689 1943 dbSNP
rs1401352414 1944 dbSNP
rs1244460819 1946 dbSNP
rs1379809803 1948 dbSNP
rs1394700771 1951 dbSNP
rs1393514889 1952 dbSNP
rs1039151013 1954 dbSNP
rs73273151 1955 dbSNP
rs1221968731 1957 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084041. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep1 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugacgucggaacuggAGGGUc 5'
                         |: || 
Target 5' ----aauugcugggaUUACAg 3'
1 - 17
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084041
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep1
Location of target site ENST00000406452.3 | 3UTR | AAUUGCUGGGAUUACAGGCGUGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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