pre-miRNA Information
pre-miRNA hsa-mir-6819   
Genomic Coordinates chr22: 36286847 - 36286907
Description Homo sapiens miR-6819 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6819-3p
Sequence 41| AAGCCUCUGUCCCCACCCCAG |61
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1279530967 2 dbSNP
rs967579979 3 dbSNP
rs776891214 4 dbSNP
rs771166635 8 dbSNP
rs747037324 9 dbSNP
rs879248090 11 dbSNP
rs1485325191 12 dbSNP
rs778157316 16 dbSNP
Putative Targets

Gene Information
Gene Symbol LRP10   
Synonyms LRP-10, LRP9, MST087, MSTP087
Description LDL receptor related protein 10
Transcript NM_014045   
Expression
Putative miRNA Targets on LRP10
3'UTR of LRP10
(miRNA target sites are highlighted)
>LRP10|NM_014045|3'UTR
   1 GGGGACCTGGGGGCTCTACTGAGGCCTCTCCCCTGGGGGCTCTACTCATAGTGGCACAACCTTTTAGAGGTGGGTCAGCC
  81 TCCCCTCCACCACTTCCTTCCCTGTCCCTGGATTTCAGGGACTTGGTGGGCCTCCCGTTGACCCTATGTAGCTGCTATAA
 161 AGTTAAGTGTCCCTCAGGCAGGGAGAGGGCTCACAGAGTCTCCTCTGTACGTGGCCATGGCCAGACACCCCAGTCCCTTC
 241 ACCACCACCTGCTCCCCACGCCACCACCATTTGGGTGGCTGTTTTTAAAAAGTAAAGTTCTTAGAGGATCATAGGTCTGG
 321 ACACTCCATCCTTGCCAAACCTCTACCCAAAAGTGGCCTTAAGCACCGGAATGCCAATTAACTAGAGACCCTCCAGCCCC
 401 CAAGGGGAGGATTTGGGCAGAACCTGAGGTTTTGCCATCCACAATCCCTCCTACAGGGCCTGGCTCACAAAAAGAGTGCA
 481 ACAAATGCTTCTATTCCATAGCTACGGCATTGCTCAGTAAGTTGAGGTCAAAAATAAAGGAATCATACATCTCAAAATTT
 561 TGCAAATTAGCTGCGAGCCTGAGCCCCGCCTCTGCCCATCTCAGTCTATGCTCACCTCATCCCACTCCTCCCTGTGGAGC
 641 CCTTTGCTTGGCCCTCTACCTCCTGCCCTCTTCCTGTTCATCTCCCAACCACTGCACTCTTGATTTTTATACCACACAGA
 721 AGGTAAGAAAATTCTAGGAACCCTAAGGATCAATCCTCTCCATTTTCACTCAAATGCCTGGGGCCCAGCTCTGCAATGAC
 801 TGACTCCAGGGCCTCTTTCCTCACTGCCAGCATAGAAGTCAGGGGAGCCAGCTGGGCCCTGCGGTCAGGAAGGTTCTCAT
 881 TTTTGGAGCATACCCTGAGCCCAGATCATAGGAGCAGCTGTCCCTGGTGGGACACAGGAGTCATGACTCCTACCCTCCAC
 961 CCTCCACACCCACCAGGCATTTAGCAGTCTGTCCTATGCAAGACAGATGAATTCTCAGCCAGGATACCTCAAGGCAGGCA
1041 AAGGTGAGTGGAGGGAGAATTCACAAACATTCAGGGTGTGTGGTGCTGGCATCACCATGGCCAAATCCAAGAGGTCTTCC
1121 TGGAAGAGGGCCCAAACTGGAACCAAAAGAATGCTGTCAGCAGTTGGAATAGAGCTGTGAATTCTAGACAGGGGGAGTGT
1201 CCCCAGAACAAGCAAACGGAGGAGACAAGAGGGCAAGGGTTATAGGAAAGACCCTGGGCCTGAGAGCACAAGCAGCGGCC
1281 AGAGCTGCAGCGCTGGGGTGGGTGATGGAGGGAATGATTCGCAAGCAGTGTTGGAACCCAGCCCCTAGTGAGCAAAGTGA
1361 CAGAAGCTGCCCCAGAGTTTGGAAGGAAGATCGAGGCAGAAGATGTAGAAGGAAGCTGTGGGGGTGGGAGTGATGCCTCA
1441 GGAACAAAACTGAGGAATTCCCTAACGGACCCAGTCCCTGGGGAAAGAGGCTCCCCTCAGGCTCTCCTTGTCTAGCCCCA
1521 CACCTGGCAGAGCCTGTCACCCAGCCTAGCCCCACGCCTGGCAGAGCCCATCACCCAGCCTAGCCCCACACCTGGTGGAG
1601 AGGCCCTGTTGATTACACCCTGTCAGCCTCCTCAAACCCAGCACTAATTGCACAATTTTCCTCTCTTCTAGTGAGCAAGA
1681 GCCTGAGGAAGTAGCAGAGAGGGGTGTGGGCCCATGTGCAGTTCTGGGACCCTGGCACCTTGGCTCAGGGAAGACCCGAG
1761 CTCCTTTCACTGCAGACCCTCTCCAGAGACTGGGGAGAGGGCTCTGGAGAACCTGGTTCTTGCTTACTGTTCTCCCTTTG
1841 GGCCCTCCTTCCCAAACGCAAACAATCCAGGATCCACTCAGCGTCAGGCCCAATGGAAATAGTGAAGCAGTGATTTTCCC
1921 TCCCCTGCCTCTCCATAGCCTGGTCTTTTGCCCTCTCCTTTGCTCTTCTCTTCCCCCATAGCCACCTCAAATACCTGCAG
2001 CCTGATATCTTCATCCCTTCATCCAGACCTTTTCTCTCCTAGTGGTATTGCAAACTGAAAGTGGACAAAGACTTAAGGTA
2081 AACCTGCTCCTCATGGTGGAATGCTTCCAAATGCTGGAAGGAGGACTTTAGGGCAGAGTTCACTAAGGAGGCTTGTGCTT
2161 ATAGATCAGTGGGCCTGAAAGAAGTTTCTCTAGGTTCTGGTTGTGTGCTGTACGAGGTGTAGGTAGTAATAATACTCTTG
2241 TCAGCCACAGTGAAGCCCCAAGCTAGCCGGGATAGGGGACTGACCTTGTACAGGCAGCATGGAGAAACTAAGACAGAGTG
2321 TCCTGCCCAAGTGATGGCACTGGGGAGCAGTCACTCAGGTTTATTTCCACCAGGGCCCAAGAAAAAAAGAAATGAGGCAA
2401 CCTAAAATTCCATCAAGATAGATACCAATATCCAAGGTGCTTGGTCTTAGCGGTGTGGGACCCACGTTAAGGCTCTTGGT
2481 GGGAAGGTGGGAGGTGTTTTCAGCATGAGATAGGGTTCAGGCTGTGAATCAGAGTCTAGAGCCTAAGATAAAAGAAGATA
2561 CCAGGGCTGGGCCACGGTGGCTTTCGCCTGTAATCCTAGCACTTTGGGAGGCCAAGGCAGGCAGACTGCCTGAGCTCAGG
2641 AGTTCGAGACTAGCCTGAGCAACACGGTGAAACCCTGTCTCTACTAAAATACAAAAAAGTAGCCAGGTGTGGCGGCATGC
2721 ACCTGTAGTCCCAGCTACTCGAGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGGAGGCGGAGGTTGCAGTGAGTGGAGA
2801 TCGCGCCACTGCACTCTAGCCTGGGTGACAGAGCGAGACTCCTTCTCCAAAAAAAAAGAAAAGAAGATACCAGAACTCAG
2881 TCCTTAAGAAACAAAATTCTGCCAGGCGCAGTAGCTCACACCTGTAATCCCAGCACTTTGGAGGGGCCAAGGCAGGCGGA
2961 TCGCTTGAGGCCAAGAGTTCAAGAACAGCCTGGGCAACATGATGAAACCCTGTCTCTACCAAAAATACTAAAAATTAGCC
3041 AGTCTCACAACCTGGTCTCAAAATAAATAAATAGATTTAAAAAAAAAATCATGGGCCTGAACCAAGCTCCAGACCTCACT
3121 AGGAGGGGAGAAGGACCCCCCAGCCACACAGCCCAAGGCTGCAGAAGCACCTAGGTGGTTAGAGAGTGAGTGCCTGGATG
3201 GGGCGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAAGAGATCAAGACC
3281 ATCCTGGCCAACATGGTGACACCGTGTCTCTACTAAAAATACAAAAATAAGCTGGGCATGGTGGTGCGTGCCTGTAGTCC
3361 CATCTACTCGGGAGGCTGAAGCAGGAGAATCACTTGAACCTGGGAGGCAAAGGTTGCAGTGAGCTGAGATCGCGCCACTG
3441 CACTCCAGCCTGGCAACAGAGCGAGACAAGACTCCATCTCAAAAAAAAAAGTGAGTGCCCGATGATGCCAGATTCTTCAT
3521 CACCTGAAGTGAACCCACACAACAGGGCTGGGCCATGGGCATCATAAACCCCATTTTGCAAGCTCAGGAGGAGCTTTAGG
3601 GAAATCAGAAGACTGGCCCAGTCTCTACCAAGTGGTGGATTTAGAGCCGGCATGGCTTCGTTCCAAATCTCACCCTTGTC
3681 CCACCATTCCATGGGACCTCCCATTCCTGAGGGAGCCTGGATACGGGCAAGTGCACAACCCGGGAGGTTGAGGTTACAGT
3761 GAGCCATGATCGCACCACTGCAGTCCAGCCCGAGCAATAGGGTGAGACCCTCCCTCTGAAAAAAATAAAAATACTCATTT
3841 TGGAAGGAAGTCATTCTAAAATGTTACACTTGTCTTCAGCATATCTGCAATATAATAATTTTCTGCATAACTGAGGATCA
3921 TTCACAGAAACCAATGGCTTTTCTCCAGCAGTGTCTTCTGAAGTTGTAACAGTAGGGGCACGGGGAGCTATTTGCTTTTA
4001 TGCTAAATGACCTTAGACCACTTATAAAATGCATATGAGTGCTTTAAATGTTATTTTGTGTGTGTGTGGTGTTGCCTCCC
4081 TGACTACAAGGGGTCACTTGCTACTCTAAATGTGTTTCTAATCTACTAGTACAGGAACACACATGGACACGTTAAAATTG
4161 TGAATAAAAGTAAGTAAAAAGTAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaccccACCCCUGUCUCCGAa 5'
                |||||| ||||||| 
Target 5' agtcccTGGGGAAAGAGGCTc 3'
1473 - 1493 167.00 -21.50
2
miRNA  3' gaccccaccccugUCUCCGAa 5'
                       ||||||| 
Target 5' tcccagctactcgAGAGGCTg 3'
2729 - 2749 140.00 -9.40
3
miRNA  3' gacCCCACCCC-UGUCUCCGAa 5'
             || ||||| :||| |||| 
Target 5' cctGGATGGGGCGCAGTGGCTc 3'
3193 - 3214 138.00 -25.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30605708 15 COSMIC
COSN30476554 31 COSMIC
COSN30533191 81 COSMIC
COSN17076485 357 COSMIC
COSN9611061 370 COSMIC
COSN16665599 375 COSMIC
COSN16003773 655 COSMIC
COSN5170782 882 COSMIC
COSN28754838 1556 COSMIC
COSN22246269 1565 COSMIC
COSN30582496 1749 COSMIC
COSN24313294 1754 COSMIC
COSN30724801 1759 COSMIC
COSN20707473 1908 COSMIC
COSN5381488 2328 COSMIC
COSN15360474 2512 COSMIC
COSN19434028 2776 COSMIC
COSN26143331 3036 COSMIC
COSN17708096 3080 COSMIC
COSN6541486 3661 COSMIC
COSN16424904 3816 COSMIC
COSN15813924 3817 COSMIC
rs35956093 3218 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs990551144 2 dbSNP
rs1173951379 3 dbSNP
rs551804669 6 dbSNP
rs1462352316 7 dbSNP
rs1333066721 9 dbSNP
rs748188207 13 dbSNP
rs1019226343 15 dbSNP
rs1446235179 17 dbSNP
rs576169854 24 dbSNP
rs1369902979 26 dbSNP
rs1388012686 27 dbSNP
rs11537735 29 dbSNP
rs777477854 31 dbSNP
rs946378932 32 dbSNP
rs1301244192 33 dbSNP
rs748761962 34 dbSNP
rs1220878179 35 dbSNP
rs754404215 35 dbSNP
rs770741190 41 dbSNP
rs1315693814 42 dbSNP
rs1197685689 43 dbSNP
rs1253237461 46 dbSNP
rs1313831328 48 dbSNP
rs1366320990 52 dbSNP
rs1347984396 67 dbSNP
rs1374116283 70 dbSNP
rs1173149616 105 dbSNP
rs975516352 120 dbSNP
rs979425589 127 dbSNP
rs61977720 134 dbSNP
rs1028316551 137 dbSNP
rs1435519693 138 dbSNP
rs924853651 138 dbSNP
rs541787027 145 dbSNP
rs1484573219 147 dbSNP
rs562013479 149 dbSNP
rs1234449158 158 dbSNP
rs527328463 163 dbSNP
rs914162674 185 dbSNP
rs1270218454 190 dbSNP
rs1234632892 191 dbSNP
rs1335002306 195 dbSNP
rs945503048 199 dbSNP
rs151223810 201 dbSNP
rs1334939094 207 dbSNP
rs1300308944 209 dbSNP
rs1443532884 211 dbSNP
rs758460669 212 dbSNP
rs1039067486 221 dbSNP
rs563843796 223 dbSNP
rs1054814637 228 dbSNP
rs1450329902 230 dbSNP
rs898810029 231 dbSNP
rs930314442 232 dbSNP
rs1062653 233 dbSNP
rs1474386306 236 dbSNP
rs1409865221 243 dbSNP
rs994812181 244 dbSNP
rs1177596677 248 dbSNP
rs1469532140 251 dbSNP
rs1231113392 252 dbSNP
rs1048117268 260 dbSNP
rs764084116 261 dbSNP
rs1264397279 264 dbSNP
rs1468529223 266 dbSNP
rs76162216 268 dbSNP
rs1211404479 269 dbSNP
rs886347769 276 dbSNP
rs550367775 277 dbSNP
rs1009266777 294 dbSNP
rs1373155121 297 dbSNP
rs1307722193 305 dbSNP
rs1443825022 308 dbSNP
rs1395302879 320 dbSNP
rs570191583 322 dbSNP
rs1262697152 336 dbSNP
rs1034875316 341 dbSNP
rs1473170827 344 dbSNP
rs757197641 350 dbSNP
rs187983996 358 dbSNP
rs549449203 359 dbSNP
rs1399909793 368 dbSNP
rs1405593124 388 dbSNP
rs140349986 390 dbSNP
rs535018746 393 dbSNP
rs1251808043 398 dbSNP
rs1191228780 405 dbSNP
rs1159697887 406 dbSNP
rs996906663 408 dbSNP
rs1397853787 419 dbSNP
rs1216874387 437 dbSNP
rs373471322 445 dbSNP
rs968125934 448 dbSNP
rs1237101283 451 dbSNP
rs1372393864 456 dbSNP
rs1028431017 458 dbSNP
rs977816904 459 dbSNP
rs923598087 460 dbSNP
rs571783899 464 dbSNP
rs537182578 469 dbSNP
rs1228302339 471 dbSNP
rs1289653328 477 dbSNP
rs957988680 478 dbSNP
rs1358357790 484 dbSNP
rs1175338321 485 dbSNP
rs1356333814 488 dbSNP
rs1214823545 491 dbSNP
rs1285598599 493 dbSNP
rs1171124271 500 dbSNP
rs373807037 506 dbSNP
rs879714408 507 dbSNP
rs1185564902 514 dbSNP
rs557405355 518 dbSNP
rs192330225 522 dbSNP
rs534447099 525 dbSNP
rs1213511680 527 dbSNP
rs1349150374 538 dbSNP
rs1280261969 541 dbSNP
rs943518147 548 dbSNP
rs1039100173 550 dbSNP
rs1472494172 557 dbSNP
rs982796666 559 dbSNP
rs920647729 568 dbSNP
rs928142116 572 dbSNP
rs1314441733 575 dbSNP
rs1338739373 575 dbSNP
rs570888312 576 dbSNP
rs959549911 584 dbSNP
rs1047762700 586 dbSNP
rs990489973 588 dbSNP
rs886422044 589 dbSNP
rs1169191575 592 dbSNP
rs1003492137 597 dbSNP
rs1382051274 599 dbSNP
rs1476614399 621 dbSNP
rs1417635361 622 dbSNP
rs1056371035 625 dbSNP
rs1486196055 633 dbSNP
rs780895959 634 dbSNP
rs1257344129 635 dbSNP
rs894982047 638 dbSNP
rs552810839 644 dbSNP
rs1375825444 647 dbSNP
rs1415885341 655 dbSNP
rs1047386889 661 dbSNP
rs1022129084 666 dbSNP
rs755713742 672 dbSNP
rs1251916864 679 dbSNP
rs185573210 681 dbSNP
rs532027020 698 dbSNP
rs1316221240 703 dbSNP
rs555253402 711 dbSNP
rs955183695 713 dbSNP
rs748799704 718 dbSNP
rs1310361722 719 dbSNP
rs1393040562 723 dbSNP
rs1397150550 724 dbSNP
rs996015013 751 dbSNP
rs912107744 754 dbSNP
rs964858895 756 dbSNP
rs974918898 757 dbSNP
rs1193230455 763 dbSNP
rs1474701294 767 dbSNP
rs1368235659 769 dbSNP
rs75535159 774 dbSNP
rs1421354773 781 dbSNP
rs1011447258 783 dbSNP
rs756618066 784 dbSNP
rs930769869 786 dbSNP
rs1198021114 788 dbSNP
rs983930383 797 dbSNP
rs1456486105 800 dbSNP
rs1285845184 804 dbSNP
rs907887936 805 dbSNP
rs1275200051 806 dbSNP
rs1214520382 810 dbSNP
rs1346118344 814 dbSNP
rs10133805 819 dbSNP
rs1282161438 820 dbSNP
rs1240925757 821 dbSNP
rs1336218999 831 dbSNP
rs1056403225 833 dbSNP
rs747418595 836 dbSNP
rs1444560570 848 dbSNP
rs1372505954 852 dbSNP
rs1276700936 854 dbSNP
rs563705755 864 dbSNP
rs757926098 869 dbSNP
rs1441944301 870 dbSNP
rs1161753006 873 dbSNP
rs577553509 874 dbSNP
rs1035236688 876 dbSNP
rs190523500 877 dbSNP
rs1178560941 879 dbSNP
rs990939589 881 dbSNP
rs4981444 893 dbSNP
rs1043601073 895 dbSNP
rs1207180082 902 dbSNP
rs903669596 916 dbSNP
rs1237846599 918 dbSNP
rs1349993833 923 dbSNP
rs1303452388 924 dbSNP
rs1439523807 925 dbSNP
rs999293576 929 dbSNP
rs1378040972 934 dbSNP
rs760004648 941 dbSNP
rs529470704 943 dbSNP
rs1328936493 944 dbSNP
rs890801842 954 dbSNP
rs1007817097 956 dbSNP
rs544779801 960 dbSNP
rs1170480153 968 dbSNP
rs1386091145 973 dbSNP
rs1400967226 975 dbSNP
rs549505593 980 dbSNP
rs1418353983 983 dbSNP
rs756903949 988 dbSNP
rs1397459250 991 dbSNP
rs1465703728 996 dbSNP
rs1174280067 997 dbSNP
rs1017890124 1000 dbSNP
rs1195554081 1005 dbSNP
rs1397500348 1005 dbSNP
rs1262146208 1006 dbSNP
rs964970974 1010 dbSNP
rs1445274486 1011 dbSNP
rs1309139197 1014 dbSNP
rs1332060791 1017 dbSNP
rs560109603 1024 dbSNP
rs528759347 1029 dbSNP
rs944390481 1041 dbSNP
rs1227673952 1045 dbSNP
rs1040254212 1053 dbSNP
rs1219463070 1054 dbSNP
rs4982699 1058 dbSNP
rs1314019153 1065 dbSNP
rs879697518 1067 dbSNP
rs1027852996 1071 dbSNP
rs952284073 1073 dbSNP
rs1169747758 1077 dbSNP
rs983558190 1090 dbSNP
rs1456473857 1091 dbSNP
rs1186889250 1098 dbSNP
rs907915997 1107 dbSNP
rs931922152 1108 dbSNP
rs1054288234 1111 dbSNP
rs1258041248 1115 dbSNP
rs1209293217 1120 dbSNP
rs1440677606 1122 dbSNP
rs1274439651 1131 dbSNP
rs1197958900 1134 dbSNP
rs892997735 1136 dbSNP
rs745670252 1138 dbSNP
rs1316842685 1152 dbSNP
rs1275899705 1154 dbSNP
rs1234826824 1162 dbSNP
rs1357726386 1167 dbSNP
rs1294343448 1173 dbSNP
rs939408592 1178 dbSNP
rs1447887333 1190 dbSNP
rs1357963786 1198 dbSNP
rs1010979409 1201 dbSNP
rs1453119331 1210 dbSNP
rs775619683 1215 dbSNP
rs879840714 1217 dbSNP
rs1376845633 1218 dbSNP
rs992199544 1219 dbSNP
rs1418275221 1222 dbSNP
rs1471746542 1227 dbSNP
rs916564219 1235 dbSNP
rs947978864 1239 dbSNP
rs1035017921 1247 dbSNP
rs571696338 1267 dbSNP
rs537443393 1268 dbSNP
rs1172327404 1272 dbSNP
rs959612281 1273 dbSNP
rs1044006442 1275 dbSNP
rs763070381 1277 dbSNP
rs903701870 1278 dbSNP
rs935122755 1281 dbSNP
rs764019485 1289 dbSNP
rs1228117980 1292 dbSNP
rs147559352 1293 dbSNP
rs1281765477 1298 dbSNP
rs1448251989 1303 dbSNP
rs568610827 1311 dbSNP
rs1017919736 1317 dbSNP
rs1015091986 1320 dbSNP
rs1463164932 1321 dbSNP
rs899496021 1322 dbSNP
rs1388902768 1326 dbSNP
rs1322055165 1327 dbSNP
rs975740474 1329 dbSNP
rs567704598 1339 dbSNP
rs1177683621 1345 dbSNP
rs1439061144 1353 dbSNP
rs1345271122 1362 dbSNP
rs1194992701 1383 dbSNP
rs921636705 1393 dbSNP
rs1245786221 1398 dbSNP
rs1219008239 1404 dbSNP
rs535298225 1406 dbSNP
rs117361132 1407 dbSNP
rs1316176366 1412 dbSNP
rs1218018944 1416 dbSNP
rs572029127 1417 dbSNP
rs1353644454 1418 dbSNP
rs534628596 1421 dbSNP
rs557591036 1422 dbSNP
rs1293144678 1426 dbSNP
rs1042440370 1427 dbSNP
rs960802748 1441 dbSNP
rs1159050218 1443 dbSNP
rs992229051 1451 dbSNP
rs916596692 1456 dbSNP
rs11623552 1459 dbSNP
rs1260543629 1461 dbSNP
rs543361697 1467 dbSNP
rs546214996 1468 dbSNP
rs748951912 1471 dbSNP
rs563250582 1472 dbSNP
rs573647733 1474 dbSNP
rs1244143135 1477 dbSNP
rs1217846244 1478 dbSNP
rs1459959510 1479 dbSNP
rs1161945302 1481 dbSNP
rs1284517617 1487 dbSNP
rs1365398940 1490 dbSNP
rs1237217364 1494 dbSNP
rs774380070 1496 dbSNP
rs558211051 1503 dbSNP
rs142100436 1508 dbSNP
rs894989511 1512 dbSNP
rs573357600 1518 dbSNP
rs966187269 1520 dbSNP
rs975853289 1522 dbSNP
rs1012453661 1523 dbSNP
rs1399186353 1523 dbSNP
rs1381847441 1525 dbSNP
rs528681683 1531 dbSNP
rs1376550408 1534 dbSNP
rs1313611150 1535 dbSNP
rs552144066 1536 dbSNP
rs564631653 1537 dbSNP
rs565574677 1537 dbSNP
rs1194769298 1555 dbSNP
rs778221810 1556 dbSNP
rs1242573197 1557 dbSNP
rs530813888 1557 dbSNP
rs1213619550 1561 dbSNP
rs995545442 1565 dbSNP
rs1483879028 1567 dbSNP
rs550911387 1570 dbSNP
rs567668806 1571 dbSNP
rs868834827 1576 dbSNP
rs1279065657 1591 dbSNP
rs990044226 1592 dbSNP
rs1338117185 1594 dbSNP
rs914480782 1595 dbSNP
rs540694388 1607 dbSNP
rs1048050042 1617 dbSNP
rs946017988 1619 dbSNP
rs748272535 1626 dbSNP
rs1300497821 1629 dbSNP
rs747694689 1631 dbSNP
rs928511361 1638 dbSNP
rs771518256 1639 dbSNP
rs1266620934 1649 dbSNP
rs536721955 1653 dbSNP
rs1172562091 1654 dbSNP
rs1421135735 1661 dbSNP
rs772545247 1664 dbSNP
rs1464898235 1688 dbSNP
rs570017730 1692 dbSNP
rs1266877580 1704 dbSNP
rs1351810934 1705 dbSNP
rs1434428400 1708 dbSNP
rs1292972953 1710 dbSNP
rs1180687013 1711 dbSNP
rs775685463 1716 dbSNP
rs1402332551 1721 dbSNP
rs1385084832 1733 dbSNP
rs537534960 1735 dbSNP
rs895125268 1749 dbSNP
rs1274770202 1753 dbSNP
rs1023684503 1755 dbSNP
rs1339743635 1757 dbSNP
rs534498133 1758 dbSNP
rs979877952 1759 dbSNP
rs1463697947 1762 dbSNP
rs1005175785 1765 dbSNP
rs1015489225 1774 dbSNP
rs925307977 1788 dbSNP
rs377446930 1793 dbSNP
rs577830573 1802 dbSNP
rs902039016 1810 dbSNP
rs1163261204 1813 dbSNP
rs988062662 1814 dbSNP
rs1442142871 1826 dbSNP
rs1238812401 1833 dbSNP
rs1178131857 1836 dbSNP
rs912408800 1839 dbSNP
rs1456557706 1844 dbSNP
rs145847601 1849 dbSNP
rs746207400 1850 dbSNP
rs1028765945 1852 dbSNP
rs952989946 1858 dbSNP
rs138427668 1859 dbSNP
rs1263496703 1864 dbSNP
rs1241037239 1869 dbSNP
rs1354364774 1876 dbSNP
rs943852017 1883 dbSNP
rs1443955416 1884 dbSNP
rs1011238330 1886 dbSNP
rs1385916681 1889 dbSNP
rs149195602 1894 dbSNP
rs143320531 1895 dbSNP
rs977392555 1910 dbSNP
rs928427449 1914 dbSNP
rs181738848 1915 dbSNP
rs1048559421 1916 dbSNP
rs1199330880 1928 dbSNP
rs886761711 1931 dbSNP
rs1238236489 1932 dbSNP
rs992162482 1943 dbSNP
rs775932278 1952 dbSNP
rs1181014238 1956 dbSNP
rs1488544524 1963 dbSNP
rs1285205597 1965 dbSNP
rs1237957326 1968 dbSNP
rs199832781 1970 dbSNP
rs1378904192 1976 dbSNP
rs948175668 1978 dbSNP
rs1005556168 1983 dbSNP
rs1321908669 1995 dbSNP
rs553095516 1999 dbSNP
rs1361049121 2001 dbSNP
rs573524062 2003 dbSNP
rs1418450103 2006 dbSNP
rs1404414285 2009 dbSNP
rs1173267322 2010 dbSNP
rs867765266 2013 dbSNP
rs763015878 2027 dbSNP
rs1336231172 2030 dbSNP
rs896656987 2035 dbSNP
rs1478025125 2051 dbSNP
rs545572429 2055 dbSNP
rs1329200067 2058 dbSNP
rs1444090029 2066 dbSNP
rs1372375091 2067 dbSNP
rs186279687 2072 dbSNP
rs901989444 2076 dbSNP
rs997688805 2088 dbSNP
rs1218933762 2090 dbSNP
rs1341484395 2093 dbSNP
rs1398640402 2094 dbSNP
rs541701436 2094 dbSNP
rs888865645 2097 dbSNP
rs1334850518 2099 dbSNP
rs1413965342 2114 dbSNP
rs774244691 2118 dbSNP
rs761928982 2130 dbSNP
rs1173059967 2131 dbSNP
rs1466384549 2136 dbSNP
rs905316379 2137 dbSNP
rs1422596139 2142 dbSNP
rs1000942014 2155 dbSNP
rs1458695890 2156 dbSNP
rs1201095035 2162 dbSNP
rs1021697037 2169 dbSNP
rs1237995661 2173 dbSNP
rs59375076 2174 dbSNP
rs148377926 2198 dbSNP
rs142244542 2205 dbSNP
rs1019452814 2209 dbSNP
rs10147709 2211 dbSNP
rs1213196054 2212 dbSNP
rs959831256 2214 dbSNP
rs1285298935 2215 dbSNP
rs2295905 2217 dbSNP
rs1338757536 2227 dbSNP
rs1333475633 2228 dbSNP
rs1447750566 2234 dbSNP
rs915786587 2237 dbSNP
rs1406862005 2241 dbSNP
rs1424486090 2242 dbSNP
rs1414341486 2252 dbSNP
rs1467206290 2256 dbSNP
rs969429057 2262 dbSNP
rs1239416834 2263 dbSNP
rs1178748887 2267 dbSNP
rs1456997860 2267 dbSNP
rs921078537 2270 dbSNP
rs1223401989 2272 dbSNP
rs528281713 2276 dbSNP
rs753673390 2278 dbSNP
rs984921240 2279 dbSNP
rs1228205366 2285 dbSNP
rs551129244 2289 dbSNP
rs909177192 2291 dbSNP
rs113894379 2302 dbSNP
rs1240976670 2303 dbSNP
rs1376322254 2305 dbSNP
rs118071449 2309 dbSNP
rs796160811 2311 dbSNP
rs1295136171 2314 dbSNP
rs1365183880 2324 dbSNP
rs554066605 2357 dbSNP
rs1322677075 2368 dbSNP
rs537381708 2369 dbSNP
rs923507499 2370 dbSNP
rs1159242110 2371 dbSNP
rs1278378350 2372 dbSNP
rs1438538229 2376 dbSNP
rs1377993688 2381 dbSNP
rs1192551113 2382 dbSNP
rs933598689 2385 dbSNP
rs1319419753 2387 dbSNP
rs1216176021 2397 dbSNP
rs1036622056 2400 dbSNP
rs1247620231 2402 dbSNP
rs761916036 2403 dbSNP
rs1221307732 2415 dbSNP
rs879829884 2420 dbSNP
rs1050564815 2422 dbSNP
rs1288761731 2425 dbSNP
rs188646316 2429 dbSNP
rs138200602 2430 dbSNP
rs1353034297 2435 dbSNP
rs1307486115 2436 dbSNP
rs1222946776 2441 dbSNP
rs1221104763 2442 dbSNP
rs752235601 2453 dbSNP
rs777230622 2454 dbSNP
rs536250234 2459 dbSNP
rs1489955872 2460 dbSNP
rs1198998896 2463 dbSNP
rs542425294 2466 dbSNP
rs1264121198 2467 dbSNP
rs1419076810 2472 dbSNP
rs1358021344 2476 dbSNP
rs1177646287 2483 dbSNP
rs1045283562 2488 dbSNP
rs1433346714 2490 dbSNP
rs905349787 2504 dbSNP
rs553106071 2505 dbSNP
rs1001371508 2515 dbSNP
rs1424050832 2520 dbSNP
rs1485336006 2526 dbSNP
rs1479657230 2528 dbSNP
rs1478851208 2531 dbSNP
rs1032404092 2534 dbSNP
rs1488261878 2540 dbSNP
rs1011710400 2548 dbSNP
rs1168692763 2550 dbSNP
rs1212341697 2550 dbSNP
rs1418885452 2551 dbSNP
rs1405921918 2557 dbSNP
rs1278183801 2561 dbSNP
rs1042828725 2565 dbSNP
rs758026104 2566 dbSNP
rs1166800132 2572 dbSNP
rs892466880 2576 dbSNP
rs60629871 2577 dbSNP
rs1359790387 2580 dbSNP
rs998538072 2582 dbSNP
rs115945583 2586 dbSNP
rs1341930324 2587 dbSNP
rs1173772025 2591 dbSNP
rs746315492 2592 dbSNP
rs559078001 2597 dbSNP
rs575725290 2604 dbSNP
rs1466904137 2605 dbSNP
rs142885165 2637 dbSNP
rs1194885405 2644 dbSNP
rs975288243 2646 dbSNP
rs1379226979 2647 dbSNP
rs1028123723 2649 dbSNP
rs1260277764 2654 dbSNP
rs952551236 2666 dbSNP
rs1483601228 2667 dbSNP
rs1229446384 2683 dbSNP
rs561411564 2694 dbSNP
rs1292589490 2700 dbSNP
rs1201951432 2709 dbSNP
rs1022742342 2710 dbSNP
rs370272965 2712 dbSNP
rs908250786 2714 dbSNP
rs530079231 2715 dbSNP
rs1314770901 2718 dbSNP
rs1489432016 2721 dbSNP
rs1016352486 2722 dbSNP
rs79144442 2742 dbSNP
rs972087355 2746 dbSNP
rs1448482853 2747 dbSNP
rs1400582318 2748 dbSNP
rs780238705 2757 dbSNP
rs1461793064 2763 dbSNP
rs1473137110 2768 dbSNP
rs1167498586 2773 dbSNP
rs949648044 2774 dbSNP
rs1383227531 2776 dbSNP
rs1045312943 2780 dbSNP
rs546628705 2781 dbSNP
rs1489599658 2783 dbSNP
rs1239003387 2788 dbSNP
rs1198331425 2795 dbSNP
rs1479520427 2797 dbSNP
rs1267048757 2801 dbSNP
rs1362218516 2802 dbSNP
rs1417527388 2805 dbSNP
rs749683186 2806 dbSNP
rs1241703131 2809 dbSNP
rs1054289466 2823 dbSNP
rs892589476 2826 dbSNP
rs1009588213 2827 dbSNP
rs1359261779 2832 dbSNP
rs1041052389 2835 dbSNP
rs568073024 2836 dbSNP
rs1458803654 2838 dbSNP
rs1385171290 2841 dbSNP
rs1286473588 2842 dbSNP
rs901152966 2842 dbSNP
rs113689705 2843 dbSNP
rs1381047051 2849 dbSNP
rs1436317794 2859 dbSNP
rs1028200909 2861 dbSNP
rs1210219126 2861 dbSNP
rs1488084853 2869 dbSNP
rs952660282 2877 dbSNP
rs1043164735 2886 dbSNP
rs1005416714 2889 dbSNP
rs902923296 2890 dbSNP
rs1307924539 2900 dbSNP
rs1236381276 2902 dbSNP
rs1332465524 2905 dbSNP
rs1310497118 2907 dbSNP
rs774672594 2908 dbSNP
rs374008627 2909 dbSNP
rs1365414760 2913 dbSNP
rs1301807997 2916 dbSNP
rs934446299 2931 dbSNP
rs1056708235 2933 dbSNP
rs1015842639 2935 dbSNP
rs961142565 2937 dbSNP
rs992567273 2941 dbSNP
rs1443075808 2942 dbSNP
rs1212254694 2945 dbSNP
rs1241347022 2950 dbSNP
rs916935356 2958 dbSNP
rs969688896 2959 dbSNP
rs1195692436 2960 dbSNP
rs1159343351 2964 dbSNP
rs1381998508 2965 dbSNP
rs1468365974 2972 dbSNP
rs981023737 2974 dbSNP
rs1425354186 2979 dbSNP
rs552369665 2983 dbSNP
rs1331704429 2986 dbSNP
rs150647465 2989 dbSNP
rs1232124872 2993 dbSNP
rs1452609338 2995 dbSNP
rs1332572629 3000 dbSNP
rs1379610936 3002 dbSNP
rs1237248282 3013 dbSNP
rs181122647 3026 dbSNP
rs1053980247 3027 dbSNP
rs1341688056 3030 dbSNP
rs1317659584 3040 dbSNP
rs1015882236 3044 dbSNP
rs185723522 3045 dbSNP
rs1173345560 3061 dbSNP
rs567402874 3061 dbSNP
rs1469502422 3063 dbSNP
rs962133092 3066 dbSNP
rs1172558702 3078 dbSNP
rs1478072512 3079 dbSNP
rs201003455 3079 dbSNP
rs972584626 3079 dbSNP
rs564682392 3080 dbSNP
rs1321011986 3081 dbSNP
rs1221154962 3086 dbSNP
rs945474377 3091 dbSNP
rs1340576004 3093 dbSNP
rs1270125918 3100 dbSNP
rs1429290545 3105 dbSNP
rs1342291381 3111 dbSNP
rs1041085312 3126 dbSNP
rs1334964663 3127 dbSNP
rs1452103394 3127 dbSNP
rs1460912269 3136 dbSNP
rs1173162416 3137 dbSNP
rs901184136 3138 dbSNP
rs954712595 3142 dbSNP
rs552969107 3143 dbSNP
rs139731199 3147 dbSNP
rs761296505 3148 dbSNP
rs1368503220 3155 dbSNP
rs772197322 3158 dbSNP
rs1050182889 3159 dbSNP
rs1239605221 3161 dbSNP
rs910814310 3169 dbSNP
rs1438721181 3175 dbSNP
rs888410987 3179 dbSNP
rs35462909 3181 dbSNP
rs397853067 3182 dbSNP
rs947660318 3182 dbSNP
rs1245318482 3183 dbSNP
rs1180754542 3196 dbSNP
rs1380757757 3205 dbSNP
rs538765591 3206 dbSNP
rs1478828754 3211 dbSNP
rs1447853747 3215 dbSNP
rs35956093 3218 dbSNP
rs1428013621 3230 dbSNP
rs934414606 3234 dbSNP
rs1172013984 3239 dbSNP
rs1399185428 3241 dbSNP
rs1406955110 3245 dbSNP
rs546994698 3246 dbSNP
rs1162917647 3250 dbSNP
rs1056822439 3252 dbSNP
rs538050125 3254 dbSNP
rs1024024706 3255 dbSNP
rs1232598448 3255 dbSNP
rs1202878474 3258 dbSNP
rs555244336 3261 dbSNP
rs574760587 3262 dbSNP
rs1347902150 3267 dbSNP
rs1357338660 3280 dbSNP
rs925589934 3290 dbSNP
rs1142013 3293 dbSNP
rs190931497 3304 dbSNP
rs1036851553 3305 dbSNP
rs1277500041 3307 dbSNP
rs914087961 3309 dbSNP
rs896990709 3321 dbSNP
rs1366036561 3347 dbSNP
rs1302439500 3348 dbSNP
rs753529872 3349 dbSNP
rs1361842658 3355 dbSNP
rs993555149 3358 dbSNP
rs1030422859 3368 dbSNP
rs954658912 3369 dbSNP
rs558500527 3371 dbSNP
rs182642103 3388 dbSNP
rs187290440 3393 dbSNP
rs1199262277 3402 dbSNP
rs1049776946 3404 dbSNP
rs1288173370 3408 dbSNP
rs562838886 3432 dbSNP
rs530735857 3433 dbSNP
rs1037332945 3434 dbSNP
rs896996210 3435 dbSNP
rs1014064510 3441 dbSNP
rs1024138850 3442 dbSNP
rs1345889083 3443 dbSNP
rs968980341 3445 dbSNP
rs764769661 3446 dbSNP
rs1267645948 3458 dbSNP
rs550461582 3463 dbSNP
rs573244879 3464 dbSNP
rs1429405532 3476 dbSNP
rs956425592 3479 dbSNP
rs1177760741 3481 dbSNP
rs529289940 3481 dbSNP
rs1430365502 3492 dbSNP
rs1032690984 3494 dbSNP
rs957234857 3495 dbSNP
rs1195284203 3497 dbSNP
rs529598836 3501 dbSNP
rs917006390 3502 dbSNP
rs948508559 3508 dbSNP
rs1044021038 3510 dbSNP
rs1460956784 3511 dbSNP
rs909566476 3519 dbSNP
rs1212449607 3520 dbSNP
rs989750678 3522 dbSNP
rs1262212451 3524 dbSNP
rs1021128873 3536 dbSNP
rs1037371810 3543 dbSNP
rs966924454 3544 dbSNP
rs753669974 3556 dbSNP
rs922755783 3571 dbSNP
rs932781796 3578 dbSNP
rs998026964 3580 dbSNP
rs1050947695 3581 dbSNP
rs890541366 3593 dbSNP
rs1280254101 3601 dbSNP
rs561181341 3607 dbSNP
rs1404922620 3608 dbSNP
rs1334354365 3615 dbSNP
rs1468563841 3618 dbSNP
rs1226630845 3628 dbSNP
rs1375184631 3629 dbSNP
rs192045784 3632 dbSNP
rs1007672579 3638 dbSNP
rs182869008 3645 dbSNP
rs868235185 3647 dbSNP
rs969136604 3649 dbSNP
rs941321786 3650 dbSNP
rs566506319 3651 dbSNP
rs956176133 3652 dbSNP
rs1458906520 3654 dbSNP
rs538245235 3657 dbSNP
rs1226549034 3659 dbSNP
rs1305695989 3660 dbSNP
rs552293456 3661 dbSNP
rs540269444 3667 dbSNP
rs1246059930 3677 dbSNP
rs1259119471 3682 dbSNP
rs1045619244 3683 dbSNP
rs1312426099 3684 dbSNP
rs917456520 3692 dbSNP
rs1399024679 3697 dbSNP
rs1461863161 3712 dbSNP
rs969766246 3716 dbSNP
rs1427363817 3718 dbSNP
rs905663554 3720 dbSNP
rs568810295 3721 dbSNP
rs979833106 3725 dbSNP
rs1001308106 3726 dbSNP
rs1033133296 3727 dbSNP
rs1193141400 3728 dbSNP
rs1195026285 3734 dbSNP
rs1479570992 3742 dbSNP
rs72681960 3743 dbSNP
rs1446836504 3747 dbSNP
rs1162129902 3749 dbSNP
rs1358080230 3757 dbSNP
rs1010350752 3761 dbSNP
rs1019903873 3766 dbSNP
rs1241819909 3772 dbSNP
rs117856724 3773 dbSNP
rs966955568 3776 dbSNP
rs778875528 3792 dbSNP
rs1029799831 3793 dbSNP
rs1364990552 3796 dbSNP
rs187506975 3801 dbSNP
rs1455485996 3802 dbSNP
rs1364589165 3821 dbSNP
rs1313357313 3825 dbSNP
rs1181446429 3832 dbSNP
rs954331985 3834 dbSNP
rs1243673627 3839 dbSNP
rs985565615 3851 dbSNP
rs909926055 3862 dbSNP
rs1241903167 3867 dbSNP
rs1288879259 3869 dbSNP
rs534256734 3894 dbSNP
rs758132553 3908 dbSNP
rs972769930 3911 dbSNP
rs1039547945 3912 dbSNP
rs1236489684 3913 dbSNP
rs904484628 3920 dbSNP
rs1345446538 3921 dbSNP
rs1301903559 3928 dbSNP
rs777349186 3931 dbSNP
rs1385818536 3939 dbSNP
rs1158192274 3946 dbSNP
rs373528414 3947 dbSNP
rs1451926969 3948 dbSNP
rs1463104212 3951 dbSNP
rs192128310 3960 dbSNP
rs748259837 3978 dbSNP
rs576874070 3982 dbSNP
rs545833038 3983 dbSNP
rs892046450 3991 dbSNP
rs1260460086 4002 dbSNP
rs563009541 4004 dbSNP
rs1014487249 4022 dbSNP
rs1024397072 4026 dbSNP
rs1054287485 4030 dbSNP
rs1303563160 4033 dbSNP
rs1323362070 4044 dbSNP
rs1408345660 4049 dbSNP
rs1230326563 4051 dbSNP
rs970216707 4054 dbSNP
rs979834458 4056 dbSNP
rs1017103260 4057 dbSNP
rs962525293 4075 dbSNP
rs892915592 4077 dbSNP
rs972806885 4079 dbSNP
rs1427000840 4081 dbSNP
rs1009969023 4087 dbSNP
rs1475718399 4088 dbSNP
rs1335949697 4090 dbSNP
rs1041394351 4096 dbSNP
rs1377409268 4124 dbSNP
rs1462310240 4142 dbSNP
rs933883823 4145 dbSNP
rs1304432288 4151 dbSNP
rs200503280 4151 dbSNP
rs1316028829 4152 dbSNP
rs1233517411 4165 dbSNP
rs1264505017 4168 dbSNP
rs749679551 4168 dbSNP
rs1320735243 4173 dbSNP
rs771251475 4179 dbSNP
rs1198032445 4183 dbSNP
rs1340687247 4185 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084041. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep1 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gaccccaccccugUCUCCGAa 5'
                       ||||||| 
Target 5' -------------AGAGGCUg 3'
1 - 8
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084041
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep1
Location of target site ENST00000359591.4 | 3UTR | AGAGGCUGAGGCAGGAGAAUUGCUUGAACCCGGGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
108 hsa-miR-6819-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT358318 PANK3 pantothenate kinase 3 2 2
MIRT454719 UBQLNL ubiquilin like 2 2
MIRT471362 PEG10 paternally expressed 10 2 2
MIRT478101 DLG5 discs large MAGUK scaffold protein 5 2 4
MIRT495554 GOLGA6L4 golgin A6 family-like 4 2 2
MIRT495587 GOLGA6L10 golgin A6 family-like 10 2 2
MIRT508315 RPL18 ribosomal protein L18 2 4
MIRT529183 ADAM33 ADAM metallopeptidase domain 33 2 2
MIRT532035 FHDC1 FH2 domain containing 1 2 2
MIRT545131 ANXA5 annexin A5 2 2
MIRT567288 HNRNPL heterogeneous nuclear ribonucleoprotein L 2 2
MIRT568094 CEBPG CCAAT/enhancer binding protein gamma 2 2
MIRT573291 DLX4 distal-less homeobox 4 2 2
MIRT575169 Fam120c family with sequence similarity 120, member C 2 2
MIRT609495 DNASE1L3 deoxyribonuclease 1 like 3 2 2
MIRT611264 EHD3 EH domain containing 3 2 2
MIRT613580 POC5 POC5 centriolar protein 2 2
MIRT616520 C9orf170 chromosome 9 open reading frame 170 2 2
MIRT617098 ZNF667 zinc finger protein 667 2 2
MIRT618268 DDX51 DEAD-box helicase 51 2 2
MIRT618294 ZNF682 zinc finger protein 682 2 2
MIRT618617 SHOX short stature homeobox 2 2
MIRT619741 SRFBP1 serum response factor binding protein 1 2 2
MIRT619784 NRIP2 nuclear receptor interacting protein 2 2 2
MIRT621119 SP110 SP110 nuclear body protein 2 2
MIRT622530 RAD51 RAD51 recombinase 2 2
MIRT623088 NME6 NME/NM23 nucleoside diphosphate kinase 6 2 2
MIRT623938 FKBP14 FK506 binding protein 14 2 2
MIRT624389 CD84 CD84 molecule 2 2
MIRT624860 ABI2 abl interactor 2 2 2
MIRT628752 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT632243 VTA1 vesicle trafficking 1 2 2
MIRT632987 E2F2 E2F transcription factor 2 2 2
MIRT633695 RBM43 RNA binding motif protein 43 2 2
MIRT633766 CENPBD1 CENPB DNA-binding domain containing 1 2 2
MIRT633808 ZNF91 zinc finger protein 91 2 2
MIRT638914 CBLN2 cerebellin 2 precursor 2 2
MIRT641298 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT642123 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT642179 HEBP2 heme binding protein 2 2 2
MIRT642617 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT643325 TMEM151B transmembrane protein 151B 2 2
MIRT644534 TMEM134 transmembrane protein 134 2 2
MIRT645820 OMA1 OMA1 zinc metallopeptidase 2 2
MIRT646093 MGST3 microsomal glutathione S-transferase 3 2 2
MIRT646861 SLC35E4 solute carrier family 35 member E4 2 2
MIRT647466 DZIP1L DAZ interacting zinc finger protein 1 like 2 2
MIRT647702 NADSYN1 NAD synthetase 1 2 2
MIRT648082 ZMIZ2 zinc finger MIZ-type containing 2 2 2
MIRT648547 TMEM169 transmembrane protein 169 2 2
MIRT648690 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT649747 GNB5 G protein subunit beta 5 2 2
MIRT650154 ZNF426 zinc finger protein 426 2 2
MIRT650450 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT650943 CTNS cystinosin, lysosomal cystine transporter 2 2
MIRT651544 WNK1 WNK lysine deficient protein kinase 1 2 2
MIRT652304 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT652890 SYVN1 synoviolin 1 2 2
MIRT654222 RNF19B ring finger protein 19B 2 2
MIRT654676 PSMB5 proteasome subunit beta 5 2 2
MIRT658249 FAXC failed axon connections homolog 2 2
MIRT658363 FAM65B RHO family interacting cell polarization regulator 2 2 2
MIRT659622 CELF1 CUGBP Elav-like family member 1 2 2
MIRT660171 BNIP3L BCL2 interacting protein 3 like 2 2
MIRT660634 ANKRD52 ankyrin repeat domain 52 2 2
MIRT662428 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT662984 PAK3 p21 (RAC1) activated kinase 3 2 2
MIRT663939 ZNF554 zinc finger protein 554 2 2
MIRT666960 PKHD1 PKHD1, fibrocystin/polyductin 2 2
MIRT667945 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 2
MIRT668847 CYCS cytochrome c, somatic 2 2
MIRT671792 RGS17 regulator of G protein signaling 17 2 2
MIRT672382 RPL37 ribosomal protein L37 2 2
MIRT673516 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 4
MIRT674716 FAM73A mitoguardin 1 2 2
MIRT676352 KLF8 Kruppel like factor 8 2 2
MIRT677820 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT678440 PDE4C phosphodiesterase 4C 2 2
MIRT678499 ARHGEF39 Rho guanine nucleotide exchange factor 39 2 2
MIRT679243 LRP10 LDL receptor related protein 10 2 2
MIRT693607 SLC39A1 solute carrier family 39 member 1 2 2
MIRT695927 ZNF174 zinc finger protein 174 2 2
MIRT697987 TSPAN6 tetraspanin 6 2 2
MIRT700821 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT701350 NR4A3 nuclear receptor subfamily 4 group A member 3 2 2
MIRT702348 KLHL7 kelch like family member 7 2 2
MIRT703387 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT703883 ERBB2IP erbb2 interacting protein 2 2
MIRT708237 PPP1R26 protein phosphatase 1 regulatory subunit 26 2 2
MIRT708629 NUDT18 nudix hydrolase 18 2 2
MIRT708990 CABP4 calcium binding protein 4 2 2
MIRT709804 FOXE1 forkhead box E1 2 2
MIRT710203 FLVCR1 feline leukemia virus subgroup C cellular receptor 1 2 2
MIRT710248 VAMP1 vesicle associated membrane protein 1 2 2
MIRT710281 FGF1 fibroblast growth factor 1 2 2
MIRT712992 IRGQ immunity related GTPase Q 2 2
MIRT713887 MOB3A MOB kinase activator 3A 2 2
MIRT715600 ADAM17 ADAM metallopeptidase domain 17 2 2
MIRT715639 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT715686 FRK fyn related Src family tyrosine kinase 2 2
MIRT717053 WIZ widely interspaced zinc finger motifs 2 2
MIRT717611 DSTYK dual serine/threonine and tyrosine protein kinase 2 2
MIRT721539 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT722096 SUSD1 sushi domain containing 1 2 2
MIRT722435 HRNR hornerin 2 2
MIRT722855 NEGR1 neuronal growth regulator 1 2 2
MIRT724621 SNAP25 synaptosome associated protein 25 2 2
MIRT724777 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6819 Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6819-3p Ceritinib 57379345 NSC776422 approved resistant High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6819-3p Cisplatin 5460033 NSC119875 approved resistant High Hypopharyngeal Cancer cell line (FaDu)
hsa-miR-6819-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-6819-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-6819-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6819-3p Osimertinib 71496458 NSC779217 approved resistant cell line (H1975)
hsa-miR-6819-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

Error report submission