pre-miRNA Information
pre-miRNA hsa-mir-4486   
Genomic Coordinates chr11: 19575310 - 19575372
Description Homo sapiens miR-4486 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4486
Sequence 5| GCUGGGCGAGGCUGGCA |21
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs774299284 8 dbSNP
rs902172817 14 dbSNP
rs1222795726 17 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol LIN9   
Synonyms BARA, BARPsv, Lin-9, TGS, TGS1, TGS2
Description lin-9 DREAM MuvB core complex component
Transcript NM_173083   
Expression
Putative miRNA Targets on LIN9
3'UTR of LIN9
(miRNA target sites are highlighted)
>LIN9|NM_173083|3'UTR
   1 GTAAAGATTTCATTATTCCAACTGCACGGGACATTGTTTTTGAGAAGTTCTTTTCCTTTATATAGGCTTCCAACACCAAA
  81 TAACCTAACTGCTGGAAAACAAGGGAAATTTAAATCTCCAAATAAGGCATTTTAATAGACTGTACTGCTTCTTAAACCAG
 161 CATTGCTGACCAGCATTATATTTATTTTTCTTTTATTATTCAGATGCAGTAGCATTGCTTATGTTACATATGTTTATATT
 241 CACAAATATTTTTAAACTGAAATATCTGAACATAATATAATTTCGTGGAAGAATACATTGACCATTTTTTTTAATGTGCA
 321 TGAATTCACCGCAACACATGCAGACAACTGCTGCAATGGAGAGTATGAAGAAACCTGGTCTTTTTATTCATGTCGGTGGC
 401 AGTGTGGAAATTCCATCCAGAAAATTACAACTCCACTTGATTTAGTTGATCACCATCTCAGTCTTCAAAAGATAACATCA
 481 TGAGGTGTGGGAAGTCCTAGTTTTAAGGAAACCACTGAAATATAGATGGGAAATGTGGACTTTACAAGTATATGTTATAT
 561 ATACTTGCAATGTGACATGGTTCTGTAGATCATTTTATAATAATAAATATTTTAATTTATCATAACATATAAAAGAAACC
 641 TTTGTTGTTTGTTGAAAGAAAATGAAGGAACAGGGGGAAAAAAGGTGCAAAATGCTAAATTTCTAAAAATGGATTTGGCA
 721 TGTCTTCCCATCAGTTCAGGTCAAAAGTGCATTGTTGTGAGATTTATTAAAAAAAAAATGATAACACACTATTTTCATAT
 801 TTTTTTGTTTATTTGCACAACTTTTAAACCAGATTACTGGTTAAAATCCAACAGTACACAATTTATAAAGTAAAAAGATT
 881 TTATAAGGAAAACAAATATAATAACCAGTGCTGTGAAATGCAGAAGAAAGGCTTGTTTTGGTTGTTTTTCTTTTTTAGGA
 961 AAACGCTGCCTAAAATGTTAATCTTGTAAAAAGTATGTATTTGGAATTTTCTTCGTTTTAATAGAATATTATAAACTCAA
1041 AATATAAATTTTTTTCAAATTTGGAGTTTAAGATATAGCTGTAGAGGTGGTTTTAATTCCTTTAGATGTCTCATAAAATG
1121 AGACTTTTTATATGTTAATGTATAATAAAACTGAAACAAGATTATTTTCCATTTGAAATTTTTGTATAGTTTAAAAAGGC
1201 TTCCGTATTCTTTGTTGGTATTGTGCCACTGCAGAACTTTAGTGCAGAGTTTATATTTAGCTAAACTGTTATGTTAATTA
1281 AGAAATGCATAAATCTTCTATTCTTAATATTTGTAATTCTAAATAAATTGATCTATGAAAATTATTATTTTC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acGGUCGGA---GCGGGUCg 5'
            ||||| |   :| |||| 
Target 5' aaCCAGCATTGCTGACCAGc 3'
155 - 174 107.00 -19.30
2
miRNA  3' acggUCGGAGCGGGUCg 5'
              | :: | :|||| 
Target 5' tggaAATTCCATCCAGa 3'
405 - 421 93.00 -7.40
3
miRNA  3' acgGUCGGAGCGGGUcg 5'
             :||| |:||::|  
Target 5' cagTAGCATTGCTTAtg 3'
207 - 223 90.00 -9.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN24293407 6 COSMIC
COSN30484452 11 COSMIC
COSN31582678 23 COSMIC
COSN30753292 27 COSMIC
COSN30523781 28 COSMIC
COSN30114585 50 COSMIC
COSN30489483 55 COSMIC
COSN31495857 70 COSMIC
COSN30469845 84 COSMIC
COSN31597669 100 COSMIC
COSN28646771 162 COSMIC
COSN31581315 193 COSMIC
COSN1434157 214 COSMIC
COSN1434156 228 COSMIC
COSN31483950 364 COSMIC
COSN23337504 536 COSMIC
COSN31588255 565 COSMIC
COSN31527637 635 COSMIC
COSN31517420 658 COSMIC
COSN20096068 672 COSMIC
COSN26218994 766 COSMIC
COSN28925882 768 COSMIC
COSN27461154 769 COSMIC
COSN31597335 769 COSMIC
COSN31595836 799 COSMIC
COSN31547946 877 COSMIC
COSN1434154 965 COSMIC
COSN15317798 975 COSMIC
COSN31566775 1014 COSMIC
COSN28763700 1036 COSMIC
COSN31515586 1056 COSMIC
COSN31608396 1210 COSMIC
COSN30543419 1226 COSMIC
COSN31521810 1233 COSMIC
COSN31522754 1256 COSMIC
COSN31567976 1325 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1159548122 1 dbSNP
rs368923092 10 dbSNP
rs1426763703 11 dbSNP
rs1313442929 20 dbSNP
rs1483630346 21 dbSNP
rs748171770 24 dbSNP
rs774285887 27 dbSNP
rs761639547 28 dbSNP
rs1339744498 32 dbSNP
rs370677165 34 dbSNP
rs1318473612 40 dbSNP
rs749383150 41 dbSNP
rs1275487392 44 dbSNP
rs1268584565 46 dbSNP
rs376836901 47 dbSNP
rs746198380 50 dbSNP
rs1258882205 63 dbSNP
rs1037491771 65 dbSNP
rs141392755 66 dbSNP
rs1191682131 67 dbSNP
rs1262572375 70 dbSNP
rs1475830782 71 dbSNP
rs1296126051 77 dbSNP
rs907949630 81 dbSNP
rs557012631 83 dbSNP
rs933292097 85 dbSNP
rs547860263 101 dbSNP
rs951087088 119 dbSNP
rs923298697 127 dbSNP
rs369824298 135 dbSNP
rs778797704 142 dbSNP
rs754945670 144 dbSNP
rs1174162787 148 dbSNP
rs61836886 162 dbSNP
rs1397590354 169 dbSNP
rs1296972492 170 dbSNP
rs780823326 180 dbSNP
rs779563316 184 dbSNP
rs1387153668 204 dbSNP
rs990299060 206 dbSNP
rs1165639130 213 dbSNP
rs956221147 217 dbSNP
rs1023589572 221 dbSNP
rs1012081742 222 dbSNP
rs1281657032 224 dbSNP
rs1350599176 232 dbSNP
rs1418686816 240 dbSNP
rs1215102981 243 dbSNP
rs568628182 253 dbSNP
rs999293914 265 dbSNP
rs1195557938 267 dbSNP
rs1481458056 271 dbSNP
rs1477567484 272 dbSNP
rs906154498 278 dbSNP
rs999628781 281 dbSNP
rs1417726067 282 dbSNP
rs879633602 285 dbSNP
rs1221647577 290 dbSNP
rs1012361789 297 dbSNP
rs1022277334 300 dbSNP
rs1321157251 305 dbSNP
rs1010891706 313 dbSNP
rs1330215314 313 dbSNP
rs1491298202 314 dbSNP
rs1293294117 315 dbSNP
rs900755819 327 dbSNP
rs1039300233 330 dbSNP
rs1279530187 331 dbSNP
rs375092906 331 dbSNP
rs532884055 334 dbSNP
rs1315836343 337 dbSNP
rs1287988085 338 dbSNP
rs941857491 339 dbSNP
rs1468154991 353 dbSNP
rs1214573311 355 dbSNP
rs535307126 356 dbSNP
rs886289946 357 dbSNP
rs1047762384 370 dbSNP
rs1177905734 378 dbSNP
rs933426834 380 dbSNP
rs929761749 383 dbSNP
rs1389405115 392 dbSNP
rs1327536491 394 dbSNP
rs190646593 395 dbSNP
rs750023999 396 dbSNP
rs941042691 400 dbSNP
rs1302991340 404 dbSNP
rs1282446912 415 dbSNP
rs552940220 418 dbSNP
rs990743868 430 dbSNP
rs1294658329 431 dbSNP
rs1456264574 444 dbSNP
rs960794055 448 dbSNP
rs1250973000 451 dbSNP
rs767140495 455 dbSNP
rs1343519993 458 dbSNP
rs1161469721 462 dbSNP
rs1473078648 466 dbSNP
rs1034877690 467 dbSNP
rs1412419836 470 dbSNP
rs1416471682 470 dbSNP
rs1198483876 490 dbSNP
rs1475271245 493 dbSNP
rs530912251 494 dbSNP
rs914814323 496 dbSNP
rs1421100283 511 dbSNP
rs1206800514 513 dbSNP
rs990413574 521 dbSNP
rs978352221 523 dbSNP
rs1269316727 526 dbSNP
rs956168956 548 dbSNP
rs966807104 574 dbSNP
rs1022836309 578 dbSNP
rs758820800 585 dbSNP
rs1295342821 587 dbSNP
rs1010860579 588 dbSNP
rs1485222048 592 dbSNP
rs924777600 597 dbSNP
rs978211625 598 dbSNP
rs1258508662 607 dbSNP
rs900513403 610 dbSNP
rs1341247272 615 dbSNP
rs1198627741 629 dbSNP
rs111497688 630 dbSNP
rs1485706265 638 dbSNP
rs1189530916 640 dbSNP
rs563580232 643 dbSNP
rs1283011571 647 dbSNP
rs1427495929 650 dbSNP
rs1222018743 651 dbSNP
rs1017780931 655 dbSNP
rs1302512345 664 dbSNP
rs548655732 666 dbSNP
rs1009119249 667 dbSNP
rs890597915 668 dbSNP
rs1463890706 671 dbSNP
rs763711559 672 dbSNP
rs1047873711 673 dbSNP
rs139586416 674 dbSNP
rs1457945966 675 dbSNP
rs528397149 684 dbSNP
rs896898693 698 dbSNP
rs1174575892 703 dbSNP
rs1038125926 711 dbSNP
rs940969311 719 dbSNP
rs1025185277 728 dbSNP
rs1011899550 730 dbSNP
rs1379160706 738 dbSNP
rs1230869162 740 dbSNP
rs990711415 752 dbSNP
rs1348420071 757 dbSNP
rs1212953893 758 dbSNP
rs1283205573 763 dbSNP
rs959329472 764 dbSNP
rs1485279638 769 dbSNP
rs187348202 769 dbSNP
rs927900178 779 dbSNP
rs966985888 779 dbSNP
rs977945541 779 dbSNP
rs1176111647 780 dbSNP
rs1394865859 780 dbSNP
rs1343477318 781 dbSNP
rs1022297976 783 dbSNP
rs1289652002 787 dbSNP
rs1385316450 787 dbSNP
rs989533953 788 dbSNP
rs774510054 790 dbSNP
rs184060115 792 dbSNP
rs540061660 797 dbSNP
rs558862506 800 dbSNP
rs1215963631 803 dbSNP
rs112592704 807 dbSNP
rs1262065339 807 dbSNP
rs1009338840 810 dbSNP
rs954975224 811 dbSNP
rs1347492344 815 dbSNP
rs1047545098 816 dbSNP
rs753163467 829 dbSNP
rs1257022055 851 dbSNP
rs1227323420 869 dbSNP
rs1196026434 871 dbSNP
rs1325249909 877 dbSNP
rs1406496252 877 dbSNP
rs901907947 878 dbSNP
rs1159837208 883 dbSNP
rs1365620190 897 dbSNP
rs1297772784 899 dbSNP
rs1460029297 904 dbSNP
rs1435842399 906 dbSNP
rs1382143821 910 dbSNP
rs1334888577 913 dbSNP
rs572733775 929 dbSNP
rs771133881 931 dbSNP
rs1308454543 935 dbSNP
rs1319434998 941 dbSNP
rs1232267696 943 dbSNP
rs914595230 945 dbSNP
rs1469178035 946 dbSNP
rs371809322 947 dbSNP
rs2377028 965 dbSNP
rs1178307623 981 dbSNP
rs775312523 998 dbSNP
rs1474292053 1000 dbSNP
rs1164455474 1003 dbSNP
rs570181515 1010 dbSNP
rs545823065 1014 dbSNP
rs924892253 1015 dbSNP
rs866435270 1018 dbSNP
rs556991832 1019 dbSNP
rs2377029 1036 dbSNP
rs568007791 1038 dbSNP
rs1391917510 1046 dbSNP
rs1181363128 1048 dbSNP
rs1443842371 1056 dbSNP
rs1336410545 1062 dbSNP
rs148302888 1066 dbSNP
rs563355017 1073 dbSNP
rs143275101 1081 dbSNP
rs1005874394 1083 dbSNP
rs1307318345 1092 dbSNP
rs950632849 1113 dbSNP
rs1277320772 1123 dbSNP
rs1484726681 1125 dbSNP
rs1187402418 1130 dbSNP
rs1229794460 1130 dbSNP
rs1042700087 1151 dbSNP
rs1358816419 1160 dbSNP
rs1476279590 1160 dbSNP
rs553569352 1168 dbSNP
rs1185028798 1170 dbSNP
rs1418487411 1186 dbSNP
rs945195566 1189 dbSNP
rs1172428935 1198 dbSNP
rs1248422364 1199 dbSNP
rs1373629818 1203 dbSNP
rs1341342423 1205 dbSNP
rs915091385 1210 dbSNP
rs1356839931 1215 dbSNP
rs1428170707 1236 dbSNP
rs1269273144 1237 dbSNP
rs1482397477 1240 dbSNP
rs1328476483 1241 dbSNP
rs1026211093 1242 dbSNP
rs997345603 1252 dbSNP
rs1346263596 1266 dbSNP
rs149174065 1267 dbSNP
rs1039094287 1271 dbSNP
rs910666506 1272 dbSNP
rs770452890 1276 dbSNP
rs893109495 1277 dbSNP
rs1054453235 1282 dbSNP
rs1430400423 1292 dbSNP
rs934689136 1299 dbSNP
rs1026530491 1300 dbSNP
rs767156257 1306 dbSNP
rs1161182808 1317 dbSNP
rs1473557077 1320 dbSNP
rs751988076 1327 dbSNP
rs1376711600 1329 dbSNP
rs1317183378 1330 dbSNP
rs1368643734 1330 dbSNP
rs1180664938 1335 dbSNP
rs1345492826 1337 dbSNP
rs1436367381 1340 dbSNP
rs1432469342 1347 dbSNP
rs1254502796 1350 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084041. RNA binding protein: AGO2. Condition:CLIP_arsenite_rep1 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acggucggAGCGGGUCg 5'
                  |||||||| 
Target 5' ------uaUCGCCCAGg 3'
1 - 11
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084041
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_arsenite_rep1
Location of target site ENST00000260129.5 | 3UTR | UAUCGCCCAGGCUGGAGUGCAGUGGCGCGAUCUCGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
108 hsa-miR-4486 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT254654 NF2 neurofibromin 2 2 2
MIRT458684 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT470845 PLXND1 plexin D1 2 2
MIRT493011 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT497264 GRK6 G protein-coupled receptor kinase 6 2 2
MIRT497675 SYNGR1 synaptogyrin 1 2 2
MIRT498219 TLN2 talin 2 2 2
MIRT498310 BCL11B B-cell CLL/lymphoma 11B 2 2
MIRT504048 TOMM5 translocase of outer mitochondrial membrane 5 2 2
MIRT519959 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT531521 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT533144 WNT10A Wnt family member 10A 2 2
MIRT533541 TPR translocated promoter region, nuclear basket protein 2 2
MIRT533681 TMEM86A transmembrane protein 86A 2 2
MIRT540321 PIGR polymeric immunoglobulin receptor 2 2
MIRT540719 GUF1 GUF1 homolog, GTPase 2 2
MIRT541566 ZNF43 zinc finger protein 43 2 4
MIRT541787 TBCCD1 TBCC domain containing 1 2 2
MIRT541925 ORC1 origin recognition complex subunit 1 2 4
MIRT542232 FUT9 fucosyltransferase 9 2 2
MIRT542285 POLR3K RNA polymerase III subunit K 2 2
MIRT542299 QTRTD1 queuine tRNA-ribosyltransferase accessory subunit 2 2 4
MIRT542368 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542441 C3 complement C3 2 4
MIRT542475 APOC3 apolipoprotein C3 2 2
MIRT542535 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT542640 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542788 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT552104 PPP1R1A protein phosphatase 1 regulatory inhibitor subunit 1A 2 2
MIRT564913 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 2
MIRT568606 ACVR2A activin A receptor type 2A 2 2
MIRT607389 LANCL3 LanC like 3 2 2
MIRT607451 ZNF543 zinc finger protein 543 2 2
MIRT610058 MYBPC1 myosin binding protein C, slow type 2 2
MIRT610793 KLK2 kallikrein related peptidase 2 2 2
MIRT617176 GOSR2 golgi SNAP receptor complex member 2 2 2
MIRT620579 WBSCR27 methyltransferase like 27 2 4
MIRT622085 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622542 PXMP4 peroxisomal membrane protein 4 2 2
MIRT630009 PDE6B phosphodiesterase 6B 2 2
MIRT631813 PTDSS2 phosphatidylserine synthase 2 2 2
MIRT632721 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT632757 MED28 mediator complex subunit 28 2 2
MIRT634821 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT635255 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT637082 SELPLG selectin P ligand 2 2
MIRT637357 ZNF460 zinc finger protein 460 2 2
MIRT637472 DEFB105B defensin beta 105B 2 4
MIRT637504 DEFB105A defensin beta 105A 2 4
MIRT639022 AAK1 AP2 associated kinase 1 2 2
MIRT641012 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT642170 HEBP2 heme binding protein 2 2 2
MIRT648977 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT650515 UFM1 ubiquitin fold modifier 1 2 2
MIRT650949 INMT indolethylamine N-methyltransferase 2 2
MIRT658354 FAM65B RHO family interacting cell polarization regulator 2 2 2
MIRT660736 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT662191 MEI1 meiotic double-stranded break formation protein 1 2 2
MIRT663045 SLC16A4 solute carrier family 16 member 4 2 2
MIRT664811 IRAK3 interleukin 1 receptor associated kinase 3 2 2
MIRT665161 SF3A1 splicing factor 3a subunit 1 2 4
MIRT665346 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT666493 SBNO1 strawberry notch homolog 1 2 2
MIRT666545 RNF115 ring finger protein 115 2 2
MIRT669351 BMP3 bone morphogenetic protein 3 2 2
MIRT669904 KIAA0754 KIAA0754 2 4
MIRT670323 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670430 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT670672 KIAA1551 KIAA1551 2 2
MIRT670746 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670998 PTGIS prostaglandin I2 synthase 2 2
MIRT671290 RPL37A ribosomal protein L37a 2 2
MIRT671469 AGPAT6 glycerol-3-phosphate acyltransferase 4 2 2
MIRT671833 STIL STIL, centriolar assembly protein 2 2
MIRT673006 TAF1 TATA-box binding protein associated factor 1 2 2
MIRT675881 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT678625 OLFML2A olfactomedin like 2A 2 2
MIRT678790 NUPL2 nucleoporin like 2 2 2
MIRT679560 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT681032 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT682480 LIX1L limb and CNS expressed 1 like 2 2
MIRT682758 MDM2 MDM2 proto-oncogene 2 2
MIRT682810 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682867 C9orf156 tRNA methyltransferase O 2 2
MIRT689233 RPS19 ribosomal protein S19 2 2
MIRT689305 C5AR2 complement component 5a receptor 2 2 2
MIRT689363 ZNF101 zinc finger protein 101 2 2
MIRT689629 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT689654 RBM23 RNA binding motif protein 23 2 2
MIRT690148 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT691407 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT691847 OSCAR osteoclast associated, immunoglobulin-like receptor 2 2
MIRT692234 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT694320 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694365 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT696215 LYZ lysozyme 2 2
MIRT697230 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT700487 PTPRF protein tyrosine phosphatase, receptor type F 2 2
MIRT700612 PRKCA protein kinase C alpha 2 2
MIRT702456 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702990 HERPUD2 HERPUD family member 2 2 2
MIRT703998 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT704701 CHRFAM7A CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion 2 2
MIRT712481 FSTL3 follistatin like 3 2 2
MIRT712781 ZNF154 zinc finger protein 154 2 2
MIRT714369 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT722570 C1orf95 stum, mechanosensory transduction mediator homolog 2 2
MIRT722839 C17orf102 chromosome 17 open reading frame 102 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4486 Dabrafenib 44462760 NSC764134 approved resistant High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-4486 Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-4486 Doxorubicin 31703 NSC123127 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-4486 Curcumin 969516 NSC32982 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-4486 Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-4486 Fulvestrant 17756771 NSC719276 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-4486 Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-4486 Cisplatin 5460033 NSC119875 approved sensitive High Gastric Cancer cell line (SGC7901)
hsa-miR-4486 Cisplatin 5460033 NSC119875 approved sensitive Low Gastric Cancer cell line (SGC-7901)
hsa-mir-4486 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-4486 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4486 Temozolomide 5394 NSC362856 approved resistant cell line (U251)
hsa-miR-4486 Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4486 Doxorubicin 31703 NSC123127 approved resistant cell line (HS578T)
hsa-miR-4486 Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-4486 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-4486 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-4486 Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)

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