pre-miRNA Information
pre-miRNA hsa-mir-2355   
Genomic Coordinates chr2: 207109987 - 207110073
Description Homo sapiens miR-2355 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-2355-5p
Sequence 11| AUCCCCAGAUACAAUGGACAA |31
Evidence Experimental
Experiments SOLiD
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 2 - 207110063 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1268296297 4 dbSNP
rs1361046879 5 dbSNP
rs1219551997 6 dbSNP
rs1295756820 12 dbSNP
rs1345273529 15 dbSNP
rs977145706 15 dbSNP
rs1209629984 20 dbSNP
rs759940260 21 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF860   
Synonyms -
Description zinc finger protein 860
Transcript NM_001137674   
Expression
Putative miRNA Targets on ZNF860
3'UTR of ZNF860
(miRNA target sites are highlighted)
>ZNF860|NM_001137674|3'UTR
   1 AGGTCACTCCTTGCAAAACATCAGAAAATTCATTCCTGAGATAATTGTTCCAAATGCAATGAGTATAGCAAACCATCAAG
  81 CATTAATTGACATTAGAGTCAATTCAGCATTGACTTGAGTTTCAGTTGACTTGACATTGAGTTCAAGCATTAATTGACAT
 161 TAAAGTGTTTACGTTAAGAGGATTGGGCTGGGCAGGGTGGCTTATACCTGTAATCCCAGCACTGTGGGAGGTCAAGACGG
 241 ATAGATCACTTGAGGTCAGGAGTTTGAGACCATCCTGGCCAAAAGACGTGAGCCACTTTTCCTAGCCTGTTTTTTGTTTC
 321 TGATAGGGATTTTTATGGGTATTGTGTTGAATCTAAATCACATTGGGTTATATAATCATTTAACAATATTAATCTTTCCA
 401 ATCCATCAATATGGGTCATATCTCTATTTATATAAGTTTTTAATCATTTTGATCAATGTTTGTAGATTTCAAGGTACAAA
 481 CTTCTCACCTTTTTACGTTTATTCCTAAATATTTCTTACTGTAAGTTCTCTAGCAAATGGAAGTGTTTTCTTAATTTTCT
 561 TTTAACATTGTTTATTGTTAATGTATGGAAATTTAACTAATTTTTGGTACTGATATTGTATTCTGCAAATACACTGTGTT
 641 TATTAGCTTCAGTAGTATTTTAGTTGACTCTGTGATTTTCTACACAGCAGATCATGTCATCTACAAACAAATACAATTTT
 721 ACTTCTTTCTTTCTGAAAAAAAAAATGGATAACTAATAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaCAGGUAACAUAGAC---CCCUa 5'
            ||:: |||| ||||   |||| 
Target 5' ctGTTTTTTGTTTCTGATAGGGAt 3'
307 - 330 123.00 -15.10
2
miRNA  3' aacaggUAACAUAGACCCCUa 5'
                |||| : ||||| | 
Target 5' aagaggATTG-GGCTGGGCAg 3'
176 - 195 118.00 -10.12
3
miRNA  3' aacaGGUAACAUAGAC-CCCUa 5'
              |||  | | ||| |||| 
Target 5' aatcCCA--GCA-CTGTGGGAg 3'
212 - 230 112.00 -10.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31559150 11 COSMIC
COSN15627184 36 COSMIC
COSN31548603 37 COSMIC
COSN26577329 39 COSMIC
COSN15316003 118 COSMIC
COSN30104199 119 COSMIC
COSN30511154 132 COSMIC
COSN31592194 135 COSMIC
COSN30133816 173 COSMIC
COSN15627185 216 COSMIC
COSN31530039 234 COSMIC
COSN7605963 239 COSMIC
COSN31534457 253 COSMIC
COSN31558716 265 COSMIC
COSN26506174 274 COSMIC
COSN31551634 306 COSMIC
COSN31563160 360 COSMIC
COSN26466329 395 COSMIC
COSN30511314 423 COSMIC
COSN6765769 535 COSMIC
COSN30120990 566 COSMIC
COSN30130455 576 COSMIC
COSN6765770 585 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs747339152 4 dbSNP
rs755331382 9 dbSNP
rs781574347 10 dbSNP
rs748634300 19 dbSNP
rs1193294429 36 dbSNP
rs1417902996 44 dbSNP
rs201417413 45 dbSNP
rs1191159722 48 dbSNP
rs1405756981 50 dbSNP
rs531025598 57 dbSNP
rs1037595243 70 dbSNP
rs182040007 75 dbSNP
rs1272720583 76 dbSNP
rs757673453 78 dbSNP
rs1350274951 79 dbSNP
rs567644032 86 dbSNP
rs1278487410 92 dbSNP
rs1172463315 105 dbSNP
rs1233587029 106 dbSNP
rs1281411991 118 dbSNP
rs34397293 118 dbSNP
rs1444277776 120 dbSNP
rs1049739965 129 dbSNP
rs1327900408 137 dbSNP
rs1415199591 151 dbSNP
rs891156759 153 dbSNP
rs1171375218 154 dbSNP
rs1447103128 163 dbSNP
rs1008224824 166 dbSNP
rs1159848678 171 dbSNP
rs553670692 173 dbSNP
rs775563358 174 dbSNP
rs1397777587 189 dbSNP
rs1255587157 190 dbSNP
rs111514380 206 dbSNP
rs1286403497 207 dbSNP
rs1340606465 208 dbSNP
rs1222174536 211 dbSNP
rs753901570 220 dbSNP
rs1278907442 221 dbSNP
rs1216812642 222 dbSNP
rs1233611698 229 dbSNP
rs538813533 231 dbSNP
rs189162672 239 dbSNP
rs1277198043 240 dbSNP
rs1011717742 242 dbSNP
rs1311941875 247 dbSNP
rs150561647 248 dbSNP
rs537127699 253 dbSNP
rs1319677040 266 dbSNP
rs1398477405 267 dbSNP
rs1407823391 271 dbSNP
rs1166294566 272 dbSNP
rs13094125 274 dbSNP
rs35460795 279 dbSNP
rs770593826 286 dbSNP
rs546924080 288 dbSNP
rs559175151 289 dbSNP
rs139660663 297 dbSNP
rs1446512012 310 dbSNP
rs1267352044 312 dbSNP
rs1214233648 317 dbSNP
rs1336920841 321 dbSNP
rs1291178386 325 dbSNP
rs1232493100 328 dbSNP
rs1362167034 332 dbSNP
rs34434923 336 dbSNP
rs1427962038 337 dbSNP
rs1413681184 340 dbSNP
rs1344085794 346 dbSNP
rs1326060681 348 dbSNP
rs563496532 349 dbSNP
rs973216644 350 dbSNP
rs530647854 352 dbSNP
rs867013250 378 dbSNP
rs1164610484 387 dbSNP
rs149742014 398 dbSNP
rs77522742 410 dbSNP
rs1417413488 416 dbSNP
rs376820073 422 dbSNP
rs1185001667 425 dbSNP
rs1360595801 425 dbSNP
rs1432330559 426 dbSNP
rs1273557877 433 dbSNP
rs1195621144 436 dbSNP
rs1469732252 438 dbSNP
rs1271225406 449 dbSNP
rs1052116236 452 dbSNP
rs1307867667 456 dbSNP
rs1274938859 460 dbSNP
rs1212425410 474 dbSNP
rs1360893965 482 dbSNP
rs143588522 482 dbSNP
rs1442497926 484 dbSNP
rs944053535 489 dbSNP
rs1367454291 497 dbSNP
rs1053107816 498 dbSNP
rs1356634777 503 dbSNP
rs1220344729 504 dbSNP
rs1305997744 506 dbSNP
rs1409575163 519 dbSNP
rs891862225 521 dbSNP
rs775511857 525 dbSNP
rs181380602 531 dbSNP
rs1323662254 538 dbSNP
rs528469118 541 dbSNP
rs1190547901 543 dbSNP
rs1480950696 553 dbSNP
rs1021786859 554 dbSNP
rs534779573 555 dbSNP
rs1340965988 562 dbSNP
rs1280626709 568 dbSNP
rs116569332 571 dbSNP
rs1345122457 577 dbSNP
rs1300072491 581 dbSNP
rs1392460391 594 dbSNP
rs1219531662 597 dbSNP
rs879506321 611 dbSNP
rs1376218515 630 dbSNP
rs112017489 632 dbSNP
rs1441963341 638 dbSNP
rs753212068 653 dbSNP
rs1175767437 666 dbSNP
rs1477635949 670 dbSNP
rs1394547235 676 dbSNP
rs959667639 685 dbSNP
rs1194195626 714 dbSNP
rs1396603860 715 dbSNP
rs1437661396 726 dbSNP
rs1004570697 736 dbSNP
rs1410107356 736 dbSNP
rs1014623982 743 dbSNP
rs1157640062 744 dbSNP
rs1007596090 746 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084040. RNA binding protein: AGO2. Condition:CLIP_noarsenite_rep1 ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aacagguaacauagACCCCUa 5'
                        |||||| 
Target 5' --------------UGGGGAg 3'
1 - 7
2
miRNA  3' aacAGGUAACAUAGACCccua 5'
             ||  ||| | ||||    
Target 5' gaaUCACUUGAACCUGG---- 3'
20 - 36
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084040
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noarsenite_rep1
Location of target site ENST00000360311.4 | 3UTR | UGGGGAGGCUGAGGCAGGAGAAUCACUUGAACCUGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
KIRP -0.392 0.01 -0.444 0.01 32 Click to see details
THCA 0.285 0.01 0.285 0.01 59 Click to see details
KICH -0.398 0.02 -0.291 0.08 25 Click to see details
BRCA -0.194 0.04 -0.228 0.02 84 Click to see details
STAD 0.26 0.08 0.350 0.02 32 Click to see details
UCEC 0.251 0.15 0.328 0.09 19 Click to see details
LIHC 0.136 0.18 0.141 0.17 49 Click to see details
PCPG 0.809 0.2 0.500 0.33 3 Click to see details
BLCA -0.145 0.28 -0.183 0.23 18 Click to see details
CHOL 0.186 0.32 0.017 0.48 9 Click to see details
ESCA -0.157 0.32 -0.373 0.13 11 Click to see details
PAAD 0.267 0.37 -0.200 0.4 4 Click to see details
CESC 0.311 0.4 0.500 0.33 3 Click to see details
HNSC 0.027 0.43 0.064 0.34 42 Click to see details
LUSC -0.024 0.44 0.061 0.36 38 Click to see details
LUAD 0.045 0.44 0.021 0.47 12 Click to see details
PRAD -0.02 0.45 -0.064 0.33 50 Click to see details
KIRC 0 0.5 0.013 0.46 68 Click to see details
KIRC 0 0.5 0.013 0.46 68 Click to see details
164 hsa-miR-2355-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT190653 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT286477 TAOK1 TAO kinase 1 2 4
MIRT318993 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT345622 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT442513 SYT7 synaptotagmin 7 2 4
MIRT444247 CTNND1 catenin delta 1 2 2
MIRT444780 ECE1 endothelin converting enzyme 1 2 2
MIRT456525 TMEM63A transmembrane protein 63A 2 2
MIRT468960 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT469834 R3HDM4 R3H domain containing 4 2 2
MIRT470027 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT471167 PHB2 prohibitin 2 2 2
MIRT475819 HDGF heparin binding growth factor 2 4
MIRT479389 CDKN1B cyclin dependent kinase inhibitor 1B 2 6
MIRT481747 APH1A aph-1 homolog A, gamma-secretase subunit 2 2
MIRT485220 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT487259 CCNF cyclin F 2 2
MIRT489971 MCC mutated in colorectal cancers 2 4
MIRT491399 C1D C1D nuclear receptor corepressor 2 2
MIRT494959 CCDC144A coiled-coil domain containing 144A 2 4
MIRT494979 PPP5D1 PPP5 tetratricopeptide repeat domain containing 1 2 2
MIRT495225 CHST14 carbohydrate sulfotransferase 14 2 2
MIRT496550 TBX15 T-box 15 2 2
MIRT501612 PISD phosphatidylserine decarboxylase 2 2
MIRT509393 TRIM24 tripartite motif containing 24 2 2
MIRT519616 ZNF788 zinc finger family member 788 2 4
MIRT519738 ZNF394 zinc finger protein 394 2 4
MIRT521230 SAR1A secretion associated Ras related GTPase 1A 2 4
MIRT521801 POM121C POM121 transmembrane nucleoporin C 2 2
MIRT526233 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT526932 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT529189 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT529329 ZNF649 zinc finger protein 649 2 2
MIRT529698 MRPL30 mitochondrial ribosomal protein L30 2 2
MIRT529921 TOP1MT DNA topoisomerase I mitochondrial 2 2
MIRT530032 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT530898 C9orf3 chromosome 9 open reading frame 3 2 2
MIRT531621 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT533132 XIAP X-linked inhibitor of apoptosis 2 2
MIRT533210 WAPAL WAPL cohesin release factor 2 2
MIRT534058 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT535487 PARVB parvin beta 2 2
MIRT536749 HOXD9 homeobox D9 2 2
MIRT551456 CARKD NAD(P)HX dehydratase 2 2
MIRT551858 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT552095 FAM8A1 family with sequence similarity 8 member A1 2 2
MIRT552332 ZNF704 zinc finger protein 704 2 2
MIRT552549 ZFP36L2 ZFP36 ring finger protein like 2 2 2
MIRT561505 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT562702 ZNF415 zinc finger protein 415 2 2
MIRT563052 ZNF138 zinc finger protein 138 2 2
MIRT564592 ZNF791 zinc finger protein 791 2 2
MIRT566422 PIGA phosphatidylinositol glycan anchor biosynthesis class A 2 2
MIRT570176 RCBTB1 RCC1 and BTB domain containing protein 1 2 2
MIRT570866 ZNF525 zinc finger protein 525 2 2
MIRT570875 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571517 ZNF625 zinc finger protein 625 2 2
MIRT572551 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT610894 HINFP histone H4 transcription factor 2 2
MIRT611037 PTGES prostaglandin E synthase 2 2
MIRT611479 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT612419 SP1 Sp1 transcription factor 2 2
MIRT614478 FRMPD3 FERM and PDZ domain containing 3 2 2
MIRT616318 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT616929 ZNF638 zinc finger protein 638 2 2
MIRT618131 GABARAPL3 GABA type A receptor associated protein like 3 pseudogene 2 2
MIRT618452 ZFP30 ZFP30 zinc finger protein 2 4
MIRT620671 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT620713 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT621126 EMC7 ER membrane protein complex subunit 7 2 4
MIRT621443 TOMM22 translocase of outer mitochondrial membrane 22 2 2
MIRT623491 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT623783 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT623918 FNBP1L formin binding protein 1 like 2 2
MIRT625723 CXorf38 chromosome X open reading frame 38 2 2
MIRT625778 GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 2 2
MIRT626940 TTR transthyretin 2 2
MIRT627357 TSC22D2 TSC22 domain family member 2 2 2
MIRT632078 ALDH1A2 aldehyde dehydrogenase 1 family member A2 2 2
MIRT633361 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT639793 MVK mevalonate kinase 2 2
MIRT643761 NAGK N-acetylglucosamine kinase 2 2
MIRT644358 NDUFAF6 NADH:ubiquinone oxidoreductase complex assembly factor 6 2 2
MIRT645558 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT646588 ANKRD36 ankyrin repeat domain 36 2 2
MIRT646631 SLC25A46 solute carrier family 25 member 46 2 2
MIRT648066 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT648142 SUCLG2 succinate-CoA ligase GDP-forming beta subunit 2 2
MIRT648416 MYOZ3 myozenin 3 2 2
MIRT649218 AMMECR1L AMMECR1 like 2 2
MIRT649772 MRPS27 mitochondrial ribosomal protein S27 2 4
MIRT650510 UFM1 ubiquitin fold modifier 1 2 2
MIRT651007 ZNF740 zinc finger protein 740 2 2
MIRT651524 WNT2B Wnt family member 2B 2 2
MIRT652014 TTYH3 tweety family member 3 2 2
MIRT652513 TMEM109 transmembrane protein 109 2 2
MIRT652686 THUMPD3 THUMP domain containing 3 2 2
MIRT652772 TENM3 teneurin transmembrane protein 3 2 2
MIRT653160 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT653765 SIX5 SIX homeobox 5 2 2
MIRT653792 SIRPA signal regulatory protein alpha 2 2
MIRT655649 OAZ2 ornithine decarboxylase antizyme 2 2 2
MIRT656263 MEX3A mex-3 RNA binding family member A 2 2
MIRT657044 KCNH6 potassium voltage-gated channel subfamily H member 6 2 2
MIRT657375 HMGA1 high mobility group AT-hook 1 2 2
MIRT657532 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT657542 GSTO2 glutathione S-transferase omega 2 2 2
MIRT657828 GJD3 gap junction protein delta 3 2 2
MIRT658946 DOK6 docking protein 6 2 2
MIRT660363 BACH2 BTB domain and CNC homolog 2 2 2
MIRT660406 ATXN7L3 ataxin 7 like 3 2 2
MIRT660948 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT661031 AAK1 AP2 associated kinase 1 2 2
MIRT662435 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT668419 FAM217B family with sequence similarity 217 member B 2 2
MIRT669332 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT676105 CLUAP1 clusterin associated protein 1 2 2
MIRT677084 SMIM15 small integral membrane protein 15 2 2
MIRT677127 OGFOD3 2-oxoglutarate and iron dependent oxygenase domain containing 3 2 2
MIRT678001 CPM carboxypeptidase M 2 2
MIRT678531 TMEM78 transmembrane protein 78 2 2
MIRT680000 ZNF860 zinc finger protein 860 2 2
MIRT680098 PXMP4 peroxisomal membrane protein 4 2 2
MIRT686795 SOX12 SRY-box 12 2 2
MIRT698887 SPTBN2 spectrin beta, non-erythrocytic 2 2 2
MIRT699371 SLC30A6 solute carrier family 30 member 6 2 2
MIRT702005 MIDN midnolin 2 2
MIRT708101 IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 2 2
MIRT709563 GYG2 glycogenin 2 2 2
MIRT710559 PPP2R5E protein phosphatase 2 regulatory subunit B'epsilon 2 2
MIRT710585 CDCA4 cell division cycle associated 4 2 2
MIRT710873 NT5DC1 5'-nucleotidase domain containing 1 2 2
MIRT711876 VASP vasodilator stimulated phosphoprotein 2 2
MIRT712226 RIMS3 regulating synaptic membrane exocytosis 3 2 2
MIRT713211 FAM13A family with sequence similarity 13 member A 2 2
MIRT713261 GPR55 G protein-coupled receptor 55 2 2
MIRT713327 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT713889 RNF19B ring finger protein 19B 2 2
MIRT714015 UBAP2L ubiquitin associated protein 2 like 2 2
MIRT714202 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT714717 VPS8 VPS8, CORVET complex subunit 2 2
MIRT714748 ZNF385D zinc finger protein 385D 2 2
MIRT714806 ARHGEF19 Rho guanine nucleotide exchange factor 19 2 2
MIRT714852 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT715717 MRPL4 mitochondrial ribosomal protein L4 2 2
MIRT715852 GRIN2A glutamate ionotropic receptor NMDA type subunit 2A 2 2
MIRT716853 MFSD12 major facilitator superfamily domain containing 12 2 2
MIRT717134 EBPL emopamil binding protein like 2 2
MIRT717248 TMEM246 transmembrane protein 246 2 2
MIRT717997 ZNF79 zinc finger protein 79 2 2
MIRT718341 PURA purine rich element binding protein A 2 2
MIRT719587 TFCP2L1 transcription factor CP2 like 1 2 2
MIRT720520 PTGR2 prostaglandin reductase 2 2 2
MIRT720671 SLC39A13 solute carrier family 39 member 13 2 2
MIRT721213 DCLK3 doublecortin like kinase 3 2 2
MIRT721757 INF2 inverted formin, FH2 and WH2 domain containing 2 2
MIRT721826 POU6F1 POU class 6 homeobox 1 2 2
MIRT722091 SUSD1 sushi domain containing 1 2 2
MIRT722275 LURAP1 leucine rich adaptor protein 1 2 2
MIRT722802 ARHGAP19 Rho GTPase activating protein 19 2 2
MIRT722866 FAM212B family with sequence similarity 212 member B 2 2
MIRT723113 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT724378 NEK8 NIMA related kinase 8 2 2
MIRT732775 PYCR1 pyrroline-5-carboxylate reductase 1 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-2355 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-2355-5p Imatinib 5291 NSC743414 approved resistant High Chronic Myelogenous Leukemia cell line (K562)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant High Non-Small Cell Lung Cancer cell line (A549, HCC827)
hsa-miR-2355-5p Temozolomide 5394 NSC362856 approved resistant High Glioma tissue
hsa-miR-2355-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-2355-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-2355-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-2355-5p Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-2355-5p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (TOV-112D)
hsa-miR-2355-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (OVSAHO)

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