pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ARL8B   
Synonyms ARL10C, Gie1
Description ADP ribosylation factor like GTPase 8B
Transcript NM_018184   
Expression
Putative miRNA Targets on ARL8B
3'UTR of ARL8B
(miRNA target sites are highlighted)
>ARL8B|NM_018184|3'UTR
   1 AGCATCTCCTGAAGTCTTCCAGTCCTTCTTGGCTATAATCCTAGAATTATTGTCCGTTCCTCTGAAGTAATTCCCAGAAT
  81 ACGGTCCTTCCTAAACCCCAGAAATTGCCTTTTTCAGAGTTTATTTCTCATGTGCACTGCTGAAGATGAATATCCCTAAT
 161 CCTTCATAAAGAATCAGCTAGAGTTGTCATGATAAAGTCAGCACACACAAAAAGGCTTCTTACACATACCTGTCTTAAAC
 241 CATGTGTAGAGCTTTAAAAACAGAAAAAAAACCCCATATACTTATGACCATCTTAAATCAAGAAAATTGCATATTTCCAT
 321 TCTGGTCTTTCTGGGCCAGATTTTTATATTGGTTTTCAGTAAATGTCTATCTATAATATTTCATTATAGAGTCCAGTAGC
 401 TTAATACTGACACTGACTTGATACAGCATGAAGTTTCTAGTGCCACACACAGTATTTAGAAAACCTTTAGGCGTGAATGA
 481 CTCATGTGGGATATATGTAAACATAATGTTTATTTTATCTCACAAATGCATGTGAAATGTATAATTACATCTTAGGAATC
 561 CAAAATGGTCTGCAGAGAGTGAGCGGAGGCACCAGATCAATGTTGGTTCTTTGCACTGGTGAGATTCTGCCTGATGAATA
 641 TTAAAGATATCCTGCTTTCTGAGAACTCTATCACCAGATGGCAGTTGGGATATGGGAGGAACTAAAGCATCCTGTTTTGT
 721 ATCTGTCCAGATCATTATTTCTGTCTCTTGTTTTTTCTTCCTGGTTCAGGATACTTTTTTAAGGGGTTGAGAATTGAAGA
 801 TTTTCCAAAAGCGTTCATGAATTTAGAGCATTCCACCCAATATAATAAAACCTGTTAAGAATGTCAGTCTTTGTTCAAAC
 881 ATCTGTTTGTTCTATCTCCAGTCATTAAATCAGTGCTGCTGCATGACACTCTTAACTCCTGACTTTTTATATCCAGTCAT
 961 AAAGTTGACTTTCAGCACAAAAGATACTTATAAACAAATAAAAAATTTTTATTTTTCTCTCTTACTGATGTAAGCTTTGG
1041 CACTCTTTTGACTGGTGCCATTAGACATCTTGATTATTGTGACAACTCTAGACCTGCCTGCTTTATCTAATGTAATCATG
1121 CTCAATGTCTACAGGTTGTTTAATAATCAGTCACACAGAGAACTGAGGAACTGATGCTGTTTGTTTGCTTCTATGATACA
1201 GAGATGTCTAAAAACTTCAAATGGACATGTTTTGTAGTTTAGCGACTTCCGTATACATAAAGGGACATATTAATACTGGT
1281 TCATTTGTAAATTATTATTCATATAGACCACTGTAGTAGATAAAACTCTATGGTACACCTGCTTATGTGTTGCCTCACAC
1361 TGTGTGTGATTTTGTTTCTTTTGTTAAGCAGCACTTATGTAGACTGCATTTCCAAATGTGTTGAGCACTCAGAGTGTAGT
1441 CAACAGTAAGTTCTTTTAATGAATATCAGTTTTAATTTATAGACTGCCATGGCCTTAAAAATATTCTGTACAATATACTG
1521 CACTGTGTTGCACAGACACTACTTGCTTTTCTCCATTCATATTTTTATGAGTAGAATCTGGGCTTTTAAATTTCTCTTCT
1601 TATTCTTTGAAGCATGTTGCATACTACCCTGGTGGGATGGATGGTTCTGTAAATGAAGGGATATTTAAACTTGCTACTGT
1681 TGTTCAACACCATTAATGGTCAGTGTGAACCATTACAAAGAATGTGGCAACTTGCTTGTGCCTAAAAGGAGGAATTGGAA
1761 CTAGAATGTGTGACTCTGTGGGGACTGCATAGGTTTGTTAATTGACCTATAGCTAAACCTTAATGTGTTTGTGTGTCTAT
1841 ACATTGCTTTCCGCATTTCAAGACATCCAGACGCTATTACCAACATTTTCCTGTGCATTAACCTCTGCATGTGAAAACTT
1921 TTAACAGTTACTGAACTATGTAAATATGTGAATTTTTTTATTTAGGTGGATGCATTTTTTGTCTGTTTACTGCTCTTCTC
2001 AGCTTTATTCAATAAACTTGCATTTTAAGGGTTGTATTGGCAATTTTAACTTAAAATGTGCATCATGATGGAAGGTGCAG
2081 ACTTTTTTGGAAGTTTCCGAGAGGAGGGTCTATAGACCATTTGTCAGAAATCAGATCAGCCCTCAAAGAATGGGGTCTGT
2161 GGGCTAGTTAAAATAGAAATAAACTTTTAAAATATCCACAGAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugaCGUCG-GAACU--GGAGGGUc 5'
             ||| | | |||  :||:||| 
Target 5' --aGCATCTCCTGAAGTCTTCCAg 3'
1 - 22 124.00 -16.40
2
miRNA  3' ugacgUCGGAACUGGAGGGUc 5'
               ||| ||  || |||| 
Target 5' tttagAGCATT--CCACCCAa 3'
822 - 840 120.00 -9.30
3
miRNA  3' ugACG--U-CGGAACUGGAGGGUc 5'
            |||  | |: ||| |||| || 
Target 5' ccTGCTTATGTGTTG-CCTCACAc 3'
1338 - 1360 120.00 -12.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM1593916 15 COSMIC
COSM1593915 22 COSMIC
COSM5202421 50 COSMIC
COSM9431309 55 COSMIC
COSN30113682 72 COSMIC
COSN30451157 76 COSMIC
COSN30184106 98 COSMIC
COSN16128965 176 COSMIC
COSN30131865 219 COSMIC
COSN29602730 272 COSMIC
COSN31562113 272 COSMIC
COSN20651111 273 COSMIC
COSN31491228 323 COSMIC
COSN31529196 351 COSMIC
COSN31541388 368 COSMIC
COSN26559831 378 COSMIC
COSN9721513 398 COSMIC
COSN25096991 747 COSMIC
COSN31544303 884 COSMIC
COSN31480593 1108 COSMIC
COSN31526403 1124 COSMIC
COSN31537742 1245 COSMIC
COSN16103289 1250 COSMIC
COSN26650545 1437 COSMIC
COSN5003393 1462 COSMIC
COSN19316671 1502 COSMIC
COSN22808319 1600 COSMIC
COSN31514774 1832 COSMIC
COSN7700479 1853 COSMIC
COSN31548178 1863 COSMIC
COSN31594829 1960 COSMIC
COSN20098077 2094 COSMIC
COSN31480768 2145 COSMIC
COSN31583237 2177 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs750841442 1 dbSNP
rs1161760516 2 dbSNP
rs1413366375 5 dbSNP
rs1406238159 18 dbSNP
rs758935284 19 dbSNP
rs1358752589 21 dbSNP
rs1399424924 22 dbSNP
rs780463626 23 dbSNP
rs752542985 25 dbSNP
rs1326884083 33 dbSNP
rs769135845 36 dbSNP
rs1282269154 39 dbSNP
rs752366624 40 dbSNP
rs777371699 41 dbSNP
rs748882799 53 dbSNP
rs1293463314 56 dbSNP
rs115131604 57 dbSNP
rs1188325004 62 dbSNP
rs1445550236 65 dbSNP
rs1258721560 72 dbSNP
rs1183195511 73 dbSNP
rs546288848 83 dbSNP
rs772026456 84 dbSNP
rs1449182748 85 dbSNP
rs775243372 90 dbSNP
rs760701634 91 dbSNP
rs1272303699 97 dbSNP
rs1445593146 100 dbSNP
rs764015795 101 dbSNP
rs776709830 103 dbSNP
rs762004962 106 dbSNP
rs1159268172 108 dbSNP
rs1387213487 109 dbSNP
rs1402442830 120 dbSNP
rs1383194505 137 dbSNP
rs940357578 139 dbSNP
rs1313802948 146 dbSNP
rs1379768732 151 dbSNP
rs1229989754 162 dbSNP
rs750495291 163 dbSNP
rs1394482568 166 dbSNP
rs1378784806 167 dbSNP
rs1040131258 203 dbSNP
rs901565194 211 dbSNP
rs56317680 223 dbSNP
rs1368801637 227 dbSNP
rs1168449620 230 dbSNP
rs1425876608 231 dbSNP
rs1370528188 236 dbSNP
rs758594013 240 dbSNP
rs1209524563 241 dbSNP
rs372987676 243 dbSNP
rs893390778 244 dbSNP
rs1011858835 246 dbSNP
rs1183036577 248 dbSNP
rs914499547 260 dbSNP
rs1241340243 261 dbSNP
rs188538987 262 dbSNP
rs181573664 263 dbSNP
rs1002841357 264 dbSNP
rs755510556 269 dbSNP
rs1035779793 272 dbSNP
rs562244007 273 dbSNP
rs1307896924 278 dbSNP
rs1458093868 280 dbSNP
rs1348660771 286 dbSNP
rs1307538041 289 dbSNP
rs1023499101 290 dbSNP
rs1406062880 306 dbSNP
rs541168998 307 dbSNP
rs1389797451 312 dbSNP
rs1161818952 334 dbSNP
rs1457660899 338 dbSNP
rs1364752244 340 dbSNP
rs1390356454 341 dbSNP
rs779700883 349 dbSNP
rs1409088027 366 dbSNP
rs1180892819 367 dbSNP
rs200903833 368 dbSNP
rs1269460645 369 dbSNP
rs984762608 370 dbSNP
rs907774259 371 dbSNP
rs1268555645 373 dbSNP
rs748564394 383 dbSNP
rs1230425185 392 dbSNP
rs574968021 393 dbSNP
rs1327398775 409 dbSNP
rs1450056439 421 dbSNP
rs1277706443 427 dbSNP
rs1372604251 429 dbSNP
rs1332910773 430 dbSNP
rs542626858 439 dbSNP
rs1386729510 450 dbSNP
rs1290032008 461 dbSNP
rs975678971 465 dbSNP
rs1321631191 470 dbSNP
rs769396441 473 dbSNP
rs1386077389 474 dbSNP
rs369812591 484 dbSNP
rs1478033522 486 dbSNP
rs1378877089 487 dbSNP
rs1432558329 488 dbSNP
rs931703971 489 dbSNP
rs1210415647 497 dbSNP
rs1050585193 501 dbSNP
rs1444207012 505 dbSNP
rs1202608214 507 dbSNP
rs893327478 509 dbSNP
rs947536019 511 dbSNP
rs1201259468 521 dbSNP
rs1232799153 530 dbSNP
rs1347151915 531 dbSNP
rs1273186544 540 dbSNP
rs1233125278 542 dbSNP
rs1366623047 545 dbSNP
rs866332461 562 dbSNP
rs1433434610 563 dbSNP
rs1360158475 564 dbSNP
rs1184745317 566 dbSNP
rs1427678215 571 dbSNP
rs903397486 574 dbSNP
rs772891078 575 dbSNP
rs1171651933 576 dbSNP
rs1170344619 577 dbSNP
rs1465468669 581 dbSNP
rs544385491 585 dbSNP
rs1035665788 586 dbSNP
rs1190434940 587 dbSNP
rs563868455 590 dbSNP
rs748773336 595 dbSNP
rs185862163 604 dbSNP
rs1410396194 606 dbSNP
rs77699050 614 dbSNP
rs1343432024 615 dbSNP
rs984994389 618 dbSNP
rs190919506 619 dbSNP
rs1277311020 621 dbSNP
rs1226858999 625 dbSNP
rs1223066662 634 dbSNP
rs1275661174 635 dbSNP
rs149189748 636 dbSNP
rs528879223 637 dbSNP
rs1347478667 640 dbSNP
rs759326584 647 dbSNP
rs1212862743 649 dbSNP
rs1285192441 651 dbSNP
rs1272429733 664 dbSNP
rs1448264983 666 dbSNP
rs1014794734 667 dbSNP
rs1331616561 669 dbSNP
rs1413556110 670 dbSNP
rs117819224 671 dbSNP
rs1170355550 683 dbSNP
rs1207950744 684 dbSNP
rs1427773029 688 dbSNP
rs1389285386 693 dbSNP
rs975732965 694 dbSNP
rs767505448 697 dbSNP
rs775099928 700 dbSNP
rs953142452 722 dbSNP
rs1200104311 724 dbSNP
rs1187116488 730 dbSNP
rs34105324 730 dbSNP
rs182631176 731 dbSNP
rs766777903 742 dbSNP
rs1478834310 744 dbSNP
rs914272999 751 dbSNP
rs947583020 751 dbSNP
rs1165616013 762 dbSNP
rs760581365 764 dbSNP
rs1230449769 765 dbSNP
rs1389041785 774 dbSNP
rs1282004858 775 dbSNP
rs1354689987 775 dbSNP
rs186302873 791 dbSNP
rs1042255442 793 dbSNP
rs1309361409 794 dbSNP
rs1430271337 800 dbSNP
rs1407898064 807 dbSNP
rs1353921933 812 dbSNP
rs1170425774 813 dbSNP
rs542488238 814 dbSNP
rs938946962 832 dbSNP
rs765528301 835 dbSNP
rs894521036 837 dbSNP
rs1428924919 839 dbSNP
rs572931584 844 dbSNP
rs750726405 857 dbSNP
rs1342981437 863 dbSNP
rs1247729823 868 dbSNP
rs1231169399 873 dbSNP
rs1289654131 874 dbSNP
rs1329490890 875 dbSNP
rs1290210000 882 dbSNP
rs1226111221 884 dbSNP
rs1048480054 885 dbSNP
rs1438553547 886 dbSNP
rs1359429844 893 dbSNP
rs1210786800 895 dbSNP
rs1325024842 896 dbSNP
rs551622386 898 dbSNP
rs1452931333 900 dbSNP
rs1006069385 904 dbSNP
rs1190602668 907 dbSNP
rs1425983439 915 dbSNP
rs1193387265 919 dbSNP
rs1014681997 920 dbSNP
rs961839623 924 dbSNP
rs1246812384 926 dbSNP
rs1209814387 932 dbSNP
rs997411531 932 dbSNP
rs1190012797 944 dbSNP
rs1269556378 948 dbSNP
rs796912475 948 dbSNP
rs1030201581 953 dbSNP
rs1315761261 954 dbSNP
rs1383284763 957 dbSNP
rs191037023 961 dbSNP
rs1220847981 962 dbSNP
rs986162378 969 dbSNP
rs1302403132 974 dbSNP
rs914346230 977 dbSNP
rs1367107411 979 dbSNP
rs1318726056 984 dbSNP
rs564019185 992 dbSNP
rs968844630 996 dbSNP
rs977157594 1000 dbSNP
rs1178383792 1001 dbSNP
rs1413253191 1007 dbSNP
rs763113793 1014 dbSNP
rs1189780902 1016 dbSNP
rs1366280687 1019 dbSNP
rs1451658575 1020 dbSNP
rs1246600683 1021 dbSNP
rs866574379 1024 dbSNP
rs1485365248 1027 dbSNP
rs183020948 1028 dbSNP
rs1340362503 1030 dbSNP
rs1246201602 1034 dbSNP
rs938830470 1038 dbSNP
rs1229076431 1042 dbSNP
rs553146456 1045 dbSNP
rs1343986695 1046 dbSNP
rs143418261 1051 dbSNP
rs1381840244 1053 dbSNP
rs1267551673 1058 dbSNP
rs535475138 1060 dbSNP
rs1057414769 1061 dbSNP
rs1206363262 1062 dbSNP
rs916129948 1067 dbSNP
rs1374941304 1070 dbSNP
rs948748861 1084 dbSNP
rs751669037 1101 dbSNP
rs1189907381 1115 dbSNP
rs1388737318 1122 dbSNP
rs1170124107 1123 dbSNP
rs187644975 1124 dbSNP
rs1256336434 1126 dbSNP
rs1183230168 1128 dbSNP
rs1484434568 1133 dbSNP
rs1256161003 1136 dbSNP
rs888551391 1139 dbSNP
rs1483968505 1145 dbSNP
rs1249418505 1147 dbSNP
rs1226334219 1149 dbSNP
rs1423124379 1156 dbSNP
rs1188181684 1157 dbSNP
rs755387714 1166 dbSNP
rs1226798634 1171 dbSNP
rs1037057754 1177 dbSNP
rs897701460 1182 dbSNP
rs1308671484 1184 dbSNP
rs530511436 1185 dbSNP
rs1468407185 1188 dbSNP
rs1030209639 1194 dbSNP
rs1297966576 1198 dbSNP
rs1158217878 1200 dbSNP
rs1389623133 1201 dbSNP
rs1459054891 1207 dbSNP
rs1334740534 1210 dbSNP
rs1370545684 1217 dbSNP
rs1166526130 1223 dbSNP
rs781735988 1225 dbSNP
rs1474000192 1241 dbSNP
rs1416559428 1244 dbSNP
rs552164337 1245 dbSNP
rs953395202 1248 dbSNP
rs1397061352 1251 dbSNP
rs575511111 1252 dbSNP
rs1021739857 1256 dbSNP
rs1488712750 1267 dbSNP
rs1266954830 1268 dbSNP
rs1334574698 1269 dbSNP
rs544475820 1271 dbSNP
rs564356595 1274 dbSNP
rs968396810 1277 dbSNP
rs564076485 1289 dbSNP
rs1334375243 1293 dbSNP
rs577768060 1294 dbSNP
rs540369393 1297 dbSNP
rs1348700013 1305 dbSNP
rs1289416824 1310 dbSNP
rs1306980589 1313 dbSNP
rs1387830792 1314 dbSNP
rs1393373926 1318 dbSNP
rs559982200 1322 dbSNP
rs1329373182 1326 dbSNP
rs1210239986 1330 dbSNP
rs148364654 1331 dbSNP
rs992955250 1332 dbSNP
rs116458402 1335 dbSNP
rs1361536997 1337 dbSNP
rs562437441 1347 dbSNP
rs1200604735 1359 dbSNP
rs948954138 1361 dbSNP
rs984375989 1363 dbSNP
rs909897151 1369 dbSNP
rs1258163247 1381 dbSNP
rs1436056501 1382 dbSNP
rs1181146159 1387 dbSNP
rs940020487 1395 dbSNP
rs1348687855 1398 dbSNP
rs1037110091 1399 dbSNP
rs568746271 1413 dbSNP
rs531652806 1425 dbSNP
rs752756123 1427 dbSNP
rs1301711340 1428 dbSNP
rs1473667222 1431 dbSNP
rs933173817 1435 dbSNP
rs1366362109 1436 dbSNP
rs4685885 1444 dbSNP
rs192648932 1454 dbSNP
rs1051518618 1460 dbSNP
rs1157430344 1485 dbSNP
rs888942030 1490 dbSNP
rs1379226163 1496 dbSNP
rs571471384 1506 dbSNP
rs1007915362 1511 dbSNP
rs1248381413 1512 dbSNP
rs1190790922 1516 dbSNP
rs1445448871 1518 dbSNP
rs183387729 1524 dbSNP
rs188075747 1531 dbSNP
rs1201044363 1534 dbSNP
rs1347214732 1537 dbSNP
rs1278886906 1540 dbSNP
rs1343367638 1541 dbSNP
rs756519543 1545 dbSNP
rs1432485309 1551 dbSNP
rs1324259960 1552 dbSNP
rs1317021909 1553 dbSNP
rs1396169988 1554 dbSNP
rs1403699364 1555 dbSNP
rs1021541990 1560 dbSNP
rs1433986781 1561 dbSNP
rs192599834 1563 dbSNP
rs1170188040 1573 dbSNP
rs1436665264 1584 dbSNP
rs566837351 1595 dbSNP
rs749698073 1595 dbSNP
rs1394931580 1600 dbSNP
rs1188492930 1609 dbSNP
rs565058807 1620 dbSNP
rs777389094 1621 dbSNP
rs535871242 1622 dbSNP
rs1031427105 1627 dbSNP
rs1255449228 1629 dbSNP
rs555364491 1630 dbSNP
rs1352733923 1632 dbSNP
rs1277226866 1643 dbSNP
rs758516797 1649 dbSNP
rs993007385 1660 dbSNP
rs1269285637 1662 dbSNP
rs1311312994 1668 dbSNP
rs1233309535 1678 dbSNP
rs1023583744 1688 dbSNP
rs1482007199 1700 dbSNP
rs1204376449 1702 dbSNP
rs1414110850 1706 dbSNP
rs1371021667 1714 dbSNP
rs374084151 1724 dbSNP
rs1408060506 1732 dbSNP
rs984817673 1761 dbSNP
rs770576424 1764 dbSNP
rs910127935 1769 dbSNP
rs1415799056 1774 dbSNP
rs1297815903 1775 dbSNP
rs1266917489 1777 dbSNP
rs1473206398 1789 dbSNP
rs1254674020 1791 dbSNP
rs546397219 1792 dbSNP
rs1290991241 1796 dbSNP
rs1210090174 1799 dbSNP
rs972686652 1810 dbSNP
rs1212479273 1818 dbSNP
rs568227852 1820 dbSNP
rs922703062 1823 dbSNP
rs1178277445 1825 dbSNP
rs1371430495 1830 dbSNP
rs745406939 1831 dbSNP
rs575201045 1834 dbSNP
rs1169791602 1840 dbSNP
rs1373023348 1841 dbSNP
rs1392469099 1844 dbSNP
rs1403480891 1844 dbSNP
rs1457886857 1846 dbSNP
rs1410217638 1852 dbSNP
rs538150637 1853 dbSNP
rs1470033054 1854 dbSNP
rs1247674495 1867 dbSNP
rs888989668 1873 dbSNP
rs977265584 1880 dbSNP
rs1467415912 1890 dbSNP
rs1387021232 1891 dbSNP
rs1212660184 1892 dbSNP
rs1329291076 1894 dbSNP
rs377536139 1898 dbSNP
rs1285702519 1904 dbSNP
rs1302695534 1917 dbSNP
rs1222028709 1919 dbSNP
rs1339466621 1924 dbSNP
rs141156549 1937 dbSNP
rs577856764 1939 dbSNP
rs1368495506 1940 dbSNP
rs1043375839 1943 dbSNP
rs1436043579 1946 dbSNP
rs904399510 1948 dbSNP
rs1400644596 1951 dbSNP
rs1176065607 1953 dbSNP
rs1426571702 1953 dbSNP
rs1344303499 1961 dbSNP
rs1219072846 1963 dbSNP
rs775541692 1974 dbSNP
rs1252728208 1975 dbSNP
rs1192652089 1984 dbSNP
rs540453655 1986 dbSNP
rs1243358756 1987 dbSNP
rs1212949556 1994 dbSNP
rs895469133 1996 dbSNP
rs535315996 2013 dbSNP
rs1345513802 2015 dbSNP
rs142839616 2020 dbSNP
rs1022710653 2022 dbSNP
rs1436109928 2023 dbSNP
rs1364272498 2027 dbSNP
rs146922203 2033 dbSNP
rs137883539 2035 dbSNP
rs1359793395 2040 dbSNP
rs56118283 2053 dbSNP
rs1315413980 2061 dbSNP
rs1433359575 2063 dbSNP
rs149345761 2084 dbSNP
rs1017624630 2087 dbSNP
rs143599604 2091 dbSNP
rs59759123 2091 dbSNP
rs147463902 2092 dbSNP
rs1392547138 2094 dbSNP
rs961579964 2099 dbSNP
rs972946461 2108 dbSNP
rs922629855 2109 dbSNP
rs1279352084 2114 dbSNP
rs1164465841 2117 dbSNP
rs1309028867 2119 dbSNP
rs1293770164 2120 dbSNP
rs1214175794 2139 dbSNP
rs1380020867 2149 dbSNP
rs1295153163 2152 dbSNP
rs1413487084 2155 dbSNP
rs955374222 2167 dbSNP
rs1309169923 2168 dbSNP
rs147163933 2174 dbSNP
rs1353093844 2184 dbSNP
rs1167924493 2185 dbSNP
rs911277505 2196 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293/HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1067870. RNA binding protein: AGO2. Condition:Ago2 IP-seq (mitotic cells) ...

- Kishore S; Gruber AR; Jedlinski DJ; Syed et al., 2013, Genome biology.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugACGUCGGAACUGGAGGGuc 5'
            | |  |||  :||||||  
Target 5' ucUCCUACCUCAGCCUCCC-- 3'
9 - 27
Article - Kishore S; Gruber AR; Jedlinski DJ; Syed et al.
- Genome biology, 2013
BACKGROUND: In recent years, a variety of small RNAs derived from other RNAs with well-known functions such as tRNAs and snoRNAs, have been identified. The functional relevance of these RNAs is largely unknown. To gain insight into the complexity of snoRNA processing and the functional relevance of snoRNA-derived small RNAs, we sequence long and short RNAs, small RNAs that co-precipitate with the Argonaute 2 protein and RNA fragments obtained in photoreactive nucleotide-enhanced crosslinking and immunoprecipitation (PAR-CLIP) of core snoRNA-associated proteins. RESULTS: Analysis of these data sets reveals that many loci in the human genome reproducibly give rise to C/D box-like snoRNAs, whose expression and evolutionary conservation are typically less pronounced relative to the snoRNAs that are currently cataloged. We further find that virtually all C/D box snoRNAs are specifically processed inside the regions of terminal complementarity, retaining in the mature form only 4-5 nucleotides upstream of the C box and 2-5 nucleotides downstream of the D box. Sequencing of the total and Argonaute 2-associated populations of small RNAs reveals that despite their cellular abundance, C/D box-derived small RNAs are not efficiently incorporated into the Ago2 protein. CONCLUSIONS: We conclude that the human genome encodes a large number of snoRNAs that are processed along the canonical pathway and expressed at relatively low levels. Generation of snoRNA-derived processing products with alternative, particularly miRNA-like, functions appears to be uncommon.
LinkOut: [PMID: 23706177]
CLIP-seq Support 1 for dataset GSM1067870
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293/HeLa / Ago2 IP-seq (mitotic cells)
Location of target site ENST00000419534.2 | 3UTR | CAAGCAAUUCUCCUACCUCAGCCUCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23706177 / GSE43666
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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