pre-miRNA Information
pre-miRNA hsa-mir-3192   
Genomic Coordinates chr20: 18470615 - 18470691
Description Homo sapiens miR-3192 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3192-5p
Sequence 10| UCUGGGAGGUUGUAGCAGUGGAA |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906254403 3 dbSNP
rs554130490 4 dbSNP
rs773140898 6 dbSNP
rs376614009 11 dbSNP
rs899297329 12 dbSNP
rs1330418015 18 dbSNP
rs1402597660 21 dbSNP
rs995052311 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SCRG1   
Synonyms SCRG-1
Description stimulator of chondrogenesis 1
Transcript NM_007281   
Expression
Putative miRNA Targets on SCRG1
3'UTR of SCRG1
(miRNA target sites are highlighted)
>SCRG1|NM_007281|3'UTR
   1 GAATCTTCATGTATTCTGGAGAACACCATTCCTGATTTCCCACAAACTGCACTACATCAGTATAACTGCATTTCTAGTTT
  81 CTATATAGTGCAATAGAGCATAGATTCTATAAATTCTTACTTGTCTAAGACAAGTAAATCTGTGTTAAACAAGTAGTAAT
 161 AAAAGTTAATTCAATCTAATTTTTCTCTGTGGAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' aaGGUGACGAUGUUGGAGGGUcu 5'
            |||:| ||  :|::|||||  
Target 5' caCCATTCCT--GATTTCCCAca 3'
24 - 44 129.00 -15.80
2
miRNA  3' aagGUGACG-----AUGUUG----GAGGGUCu 5'
             |||| |     ||:|||    :|:|:|| 
Target 5' ctgCACTACATCAGTATAACTGCATTTCTAGt 3'
47 - 78 110.00 -12.60
3
miRNA  3' aaggUGACGAUGUUGGAGGGUcu 5'
              |:| |||:|| :||::|  
Target 5' atagATT-CTATAAATTCTTAct 3'
100 - 121 98.00 -6.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31585636 8 COSMIC
COSN31574568 16 COSMIC
COSN213387 19 COSMIC
COSN31614417 25 COSMIC
COSN31564111 31 COSMIC
COSN31521656 91 COSMIC
COSN31528439 99 COSMIC
COSN1291824 107 COSMIC
COSN1291823 110 COSMIC
COSN30193748 139 COSMIC
COSN15280628 178 COSMIC
COSN25891891 451 COSMIC
COSN9890559 907 COSMIC
COSN16598530 1196 COSMIC
COSN9890558 1611 COSMIC
COSN7753224 1679 COSMIC
COSN22978367 1913 COSMIC
COSN7631865 1990 COSMIC
COSN25650598 2192 COSMIC
COSN22251647 2260 COSMIC
COSN24014343 2393 COSMIC
COSN20561071 2431 COSMIC
COSN21618340 3447 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs748651159 3 dbSNP
rs1186961706 4 dbSNP
rs1198590601 5 dbSNP
rs1482870766 7 dbSNP
rs1015078428 10 dbSNP
rs781687436 12 dbSNP
rs755366714 22 dbSNP
rs747303407 28 dbSNP
rs149730292 29 dbSNP
rs758675135 31 dbSNP
rs74561086 35 dbSNP
rs778902564 42 dbSNP
rs1401969563 43 dbSNP
rs535382981 48 dbSNP
rs770506530 48 dbSNP
rs572874363 49 dbSNP
rs552998196 50 dbSNP
rs1361641821 51 dbSNP
rs748896605 51 dbSNP
rs539293265 58 dbSNP
rs1439326548 64 dbSNP
rs1371839899 66 dbSNP
rs1233740040 68 dbSNP
rs1278282072 83 dbSNP
rs1318697282 92 dbSNP
rs1216378188 101 dbSNP
rs932231434 103 dbSNP
rs900465051 105 dbSNP
rs935519867 106 dbSNP
rs1362334869 111 dbSNP
rs776012837 126 dbSNP
rs772412512 127 dbSNP
rs1045491179 132 dbSNP
rs949712787 134 dbSNP
rs915618555 139 dbSNP
rs1052954210 146 dbSNP
rs1421423981 150 dbSNP
rs1160418584 152 dbSNP
rs1344978160 153 dbSNP
rs1452010320 154 dbSNP
rs938546812 157 dbSNP
rs570641645 161 dbSNP
rs991806924 165 dbSNP
rs1440411053 171 dbSNP
rs530322727 175 dbSNP
rs1301400882 194 dbSNP
rs1281499135 206 dbSNP
rs928495158 207 dbSNP
rs979950800 209 dbSNP
rs969964410 220 dbSNP
rs941285503 223 dbSNP
rs909700165 232 dbSNP
rs982589843 236 dbSNP
rs537334552 238 dbSNP
rs568312720 239 dbSNP
rs746155766 243 dbSNP
rs549128747 249 dbSNP
rs779017402 250 dbSNP
rs1480635414 252 dbSNP
rs529249539 253 dbSNP
rs1471895667 255 dbSNP
rs373424042 266 dbSNP
rs141008120 282 dbSNP
rs533393749 289 dbSNP
rs1461139815 295 dbSNP
rs955010008 297 dbSNP
rs1011102648 307 dbSNP
rs1357059098 309 dbSNP
rs369546288 317 dbSNP
rs894037086 324 dbSNP
rs1297667007 327 dbSNP
rs1371177577 342 dbSNP
rs1235026227 345 dbSNP
rs564329936 348 dbSNP
rs112986478 350 dbSNP
rs1231080805 354 dbSNP
rs11723871 356 dbSNP
rs1203292811 359 dbSNP
rs906702230 363 dbSNP
rs1383025420 370 dbSNP
rs900770919 375 dbSNP
rs1190632687 400 dbSNP
rs1160561828 408 dbSNP
rs1475045363 410 dbSNP
rs1045887224 412 dbSNP
rs949863786 420 dbSNP
rs894118387 421 dbSNP
rs1410739801 423 dbSNP
rs1055491291 425 dbSNP
rs1368762911 426 dbSNP
rs1163318070 429 dbSNP
rs1476480594 437 dbSNP
rs562018495 441 dbSNP
rs1193392597 448 dbSNP
rs1445677228 451 dbSNP
rs1259207264 452 dbSNP
rs1213607627 454 dbSNP
rs1270297071 455 dbSNP
rs1349362551 457 dbSNP
rs938779521 459 dbSNP
rs781022571 461 dbSNP
rs1485622721 466 dbSNP
rs982704332 467 dbSNP
rs186852574 468 dbSNP
rs1475892248 469 dbSNP
rs1231320688 474 dbSNP
rs1044220997 475 dbSNP
rs948625973 485 dbSNP
rs922501776 491 dbSNP
rs1174328155 499 dbSNP
rs1374849928 500 dbSNP
rs919865358 507 dbSNP
rs1412658952 508 dbSNP
rs532746859 509 dbSNP
rs1336844755 511 dbSNP
rs1320106701 515 dbSNP
rs1326759636 516 dbSNP
rs1293872610 518 dbSNP
rs977235338 543 dbSNP
rs570247267 544 dbSNP
rs964192419 560 dbSNP
rs1018792380 564 dbSNP
rs989408868 566 dbSNP
rs1382995963 572 dbSNP
rs768892742 578 dbSNP
rs1390030798 579 dbSNP
rs958037253 580 dbSNP
rs572782335 588 dbSNP
rs1162863655 598 dbSNP
rs1215348623 602 dbSNP
rs908210964 603 dbSNP
rs183048891 608 dbSNP
rs1419173460 611 dbSNP
rs1031171903 612 dbSNP
rs1460474616 612 dbSNP
rs1160182405 613 dbSNP
rs1385403359 613 dbSNP
rs999772353 613 dbSNP
rs906686320 614 dbSNP
rs1399835712 630 dbSNP
rs1318278447 631 dbSNP
rs1170658140 634 dbSNP
rs1183917383 636 dbSNP
rs1214505121 636 dbSNP
rs1223646118 636 dbSNP
rs1231716541 636 dbSNP
rs1252487891 636 dbSNP
rs1266595548 636 dbSNP
rs1324689988 636 dbSNP
rs1328798890 636 dbSNP
rs1352016283 636 dbSNP
rs1372595167 636 dbSNP
rs1396306655 636 dbSNP
rs1441142643 636 dbSNP
rs749325462 636 dbSNP
rs775118740 636 dbSNP
rs1364368488 638 dbSNP
rs1469556990 644 dbSNP
rs1156732904 657 dbSNP
rs114989087 669 dbSNP
rs1461660323 673 dbSNP
rs1375178786 676 dbSNP
rs1324755967 683 dbSNP
rs1194796482 684 dbSNP
rs1387967966 689 dbSNP
rs577151642 693 dbSNP
rs1392684653 697 dbSNP
rs1328946371 702 dbSNP
rs955171747 707 dbSNP
rs190873911 729 dbSNP
rs894202913 732 dbSNP
rs537213639 735 dbSNP
rs1337362202 741 dbSNP
rs1469454477 748 dbSNP
rs1273677893 752 dbSNP
rs186566306 764 dbSNP
rs146455369 765 dbSNP
rs535506185 772 dbSNP
rs1393549517 776 dbSNP
rs1193377653 778 dbSNP
rs1271727687 778 dbSNP
rs1251295052 791 dbSNP
rs1437214356 801 dbSNP
rs1011837459 806 dbSNP
rs891749965 814 dbSNP
rs1475380094 815 dbSNP
rs566855670 823 dbSNP
rs1047013085 824 dbSNP
rs1003340820 826 dbSNP
rs201884020 843 dbSNP
rs75132274 844 dbSNP
rs1040909039 851 dbSNP
rs1357768816 855 dbSNP
rs942539405 862 dbSNP
rs1415840547 868 dbSNP
rs1312446667 882 dbSNP
rs1338963616 891 dbSNP
rs1229854277 895 dbSNP
rs1251986573 896 dbSNP
rs761327478 897 dbSNP
rs1038661166 901 dbSNP
rs1282459269 906 dbSNP
rs939955386 909 dbSNP
rs1181109361 919 dbSNP
rs561686722 920 dbSNP
rs989525489 932 dbSNP
rs1193406957 937 dbSNP
rs1372008798 938 dbSNP
rs374299970 942 dbSNP
rs533259239 960 dbSNP
rs958027217 970 dbSNP
rs923978025 986 dbSNP
rs1458539437 988 dbSNP
rs1377864520 992 dbSNP
rs769664772 994 dbSNP
rs1302682141 1012 dbSNP
rs978300540 1019 dbSNP
rs971026325 1020 dbSNP
rs144021182 1029 dbSNP
rs542117555 1037 dbSNP
rs1012388798 1043 dbSNP
rs959815026 1047 dbSNP
rs550785651 1074 dbSNP
rs1005344714 1086 dbSNP
rs888107229 1091 dbSNP
rs1046794569 1095 dbSNP
rs994473877 1100 dbSNP
rs759777381 1104 dbSNP
rs956328816 1106 dbSNP
rs1254062983 1110 dbSNP
rs1486687861 1116 dbSNP
rs1205374230 1131 dbSNP
rs3052307 1134 dbSNP
rs386402313 1134 dbSNP
rs397791046 1134 dbSNP
rs74371556 1134 dbSNP
rs1395136453 1138 dbSNP
rs1041365654 1142 dbSNP
rs774385581 1149 dbSNP
rs1376286026 1151 dbSNP
rs1455616201 1159 dbSNP
rs530974684 1169 dbSNP
rs1289812772 1171 dbSNP
rs1388233640 1172 dbSNP
rs1433143411 1178 dbSNP
rs1328035829 1188 dbSNP
rs911091550 1190 dbSNP
rs1032076341 1198 dbSNP
rs1053791303 1206 dbSNP
rs1299036570 1214 dbSNP
rs907292968 1222 dbSNP
rs936786026 1226 dbSNP
rs923924237 1248 dbSNP
rs978093065 1251 dbSNP
rs1196127460 1255 dbSNP
rs1267220694 1262 dbSNP
rs1463304517 1265 dbSNP
rs1479337810 1271 dbSNP
rs1215122671 1274 dbSNP
rs76831460 1277 dbSNP
rs1487834563 1279 dbSNP
rs918142839 1284 dbSNP
rs1265961810 1288 dbSNP
rs1421367232 1295 dbSNP
rs1160437490 1297 dbSNP
rs1301465790 1315 dbSNP
rs1012962739 1317 dbSNP
rs867091984 1332 dbSNP
rs1455873152 1336 dbSNP
rs1167286727 1338 dbSNP
rs898296371 1339 dbSNP
rs1038225016 1341 dbSNP
rs1291849596 1345 dbSNP
rs879703289 1352 dbSNP
rs1287511486 1357 dbSNP
rs959564422 1359 dbSNP
rs1326764079 1365 dbSNP
rs1234751779 1367 dbSNP
rs1016477309 1372 dbSNP
rs542490308 1373 dbSNP
rs1371738786 1382 dbSNP
rs746116402 1388 dbSNP
rs1279053000 1393 dbSNP
rs1005295369 1402 dbSNP
rs1234094214 1403 dbSNP
rs1440190806 1408 dbSNP
rs1051185446 1421 dbSNP
rs952465535 1421 dbSNP
rs933685599 1424 dbSNP
rs1025419089 1432 dbSNP
rs1330199881 1437 dbSNP
rs975118302 1441 dbSNP
rs1374056899 1442 dbSNP
rs562770413 1458 dbSNP
rs749258406 1463 dbSNP
rs946465986 1464 dbSNP
rs1356301328 1477 dbSNP
rs528123273 1486 dbSNP
rs990362492 1496 dbSNP
rs1416450339 1519 dbSNP
rs993813239 1528 dbSNP
rs900835618 1529 dbSNP
rs1425499596 1531 dbSNP
rs1274538214 1536 dbSNP
rs563031713 1536 dbSNP
rs1007250229 1538 dbSNP
rs1176118427 1544 dbSNP
rs545443350 1547 dbSNP
rs889603664 1554 dbSNP
rs981398605 1557 dbSNP
rs1238392443 1561 dbSNP
rs1472606386 1573 dbSNP
rs577032635 1575 dbSNP
rs1234511415 1576 dbSNP
rs1180297108 1588 dbSNP
rs1421750048 1589 dbSNP
rs1053573464 1590 dbSNP
rs1368703265 1597 dbSNP
rs1436480332 1599 dbSNP
rs936525930 1601 dbSNP
rs543869495 1624 dbSNP
rs1277934565 1626 dbSNP
rs777919943 1627 dbSNP
rs1213219811 1640 dbSNP
rs1348857936 1641 dbSNP
rs902576428 1642 dbSNP
rs1042875477 1645 dbSNP
rs1375641626 1652 dbSNP
rs1271512737 1653 dbSNP
rs1362203480 1656 dbSNP
rs1227113006 1657 dbSNP
rs1294723385 1664 dbSNP
rs949375823 1668 dbSNP
rs971338007 1678 dbSNP
rs1213589580 1687 dbSNP
rs1022925222 1693 dbSNP
rs1442139961 1695 dbSNP
rs1208301837 1696 dbSNP
rs917951672 1699 dbSNP
rs1414709926 1702 dbSNP
rs1244114483 1710 dbSNP
rs991079198 1711 dbSNP
rs1465511303 1717 dbSNP
rs1012931435 1720 dbSNP
rs1388348680 1744 dbSNP
rs1233271585 1750 dbSNP
rs898600885 1758 dbSNP
rs180873847 1764 dbSNP
rs1004074323 1766 dbSNP
rs1412599349 1768 dbSNP
rs909363335 1771 dbSNP
rs1050989697 1777 dbSNP
rs1433882687 1787 dbSNP
rs998103839 1790 dbSNP
rs1415854249 1791 dbSNP
rs899473651 1807 dbSNP
rs984934709 1820 dbSNP
rs1236079902 1826 dbSNP
rs1275902926 1827 dbSNP
rs1359348080 1834 dbSNP
rs1157984415 1835 dbSNP
rs1398405620 1841 dbSNP
rs1330108558 1849 dbSNP
rs1409568333 1849 dbSNP
rs1039398678 1851 dbSNP
rs1246267149 1882 dbSNP
rs1469834242 1883 dbSNP
rs1199653903 1886 dbSNP
rs946436519 1889 dbSNP
rs950867152 1893 dbSNP
rs189574676 1894 dbSNP
rs1055028366 1897 dbSNP
rs972931967 1901 dbSNP
rs924782338 1904 dbSNP
rs1255394546 1911 dbSNP
rs1189798745 1913 dbSNP
rs1485902529 1914 dbSNP
rs1241690130 1929 dbSNP
rs574660734 1931 dbSNP
rs1318736628 1938 dbSNP
rs1331075868 1939 dbSNP
rs1019726353 1941 dbSNP
rs1006789904 1942 dbSNP
rs554614702 1945 dbSNP
rs1232810343 1946 dbSNP
rs1333330950 1947 dbSNP
rs915884630 1950 dbSNP
rs1228028160 1951 dbSNP
rs1266531480 1952 dbSNP
rs889675623 1957 dbSNP
rs1337217615 1964 dbSNP
rs1210548979 1966 dbSNP
rs1289207981 1968 dbSNP
rs1449819435 1978 dbSNP
rs1295694832 1980 dbSNP
rs1183856702 1985 dbSNP
rs534907758 1991 dbSNP
rs991481113 1992 dbSNP
rs1458068810 1993 dbSNP
rs1361726513 1999 dbSNP
rs963101802 2000 dbSNP
rs1404101341 2001 dbSNP
rs1000621096 2002 dbSNP
rs186302702 2003 dbSNP
rs1287886554 2008 dbSNP
rs1409671063 2010 dbSNP
rs1428222345 2011 dbSNP
rs1346399446 2012 dbSNP
rs994113509 2017 dbSNP
rs1460529959 2018 dbSNP
rs2062019 2018 dbSNP
rs1415546445 2019 dbSNP
rs1207231174 2020 dbSNP
rs1275338552 2038 dbSNP
rs11302799 2040 dbSNP
rs1202812954 2040 dbSNP
rs1371754823 2040 dbSNP
rs1389630211 2040 dbSNP
rs1482686602 2040 dbSNP
rs35154322 2040 dbSNP
rs756420661 2040 dbSNP
rs770927665 2040 dbSNP
rs781573810 2040 dbSNP
rs869108223 2040 dbSNP
rs77515855 2041 dbSNP
rs368153069 2044 dbSNP
rs1306584067 2046 dbSNP
rs1424131055 2048 dbSNP
rs951205285 2050 dbSNP
rs373983894 2051 dbSNP
rs373205007 2053 dbSNP
rs897183791 2054 dbSNP
rs181161570 2057 dbSNP
rs189679515 2058 dbSNP
rs150711915 2059 dbSNP
rs1275544602 2061 dbSNP
rs929456523 2062 dbSNP
rs919451217 2066 dbSNP
rs531037509 2069 dbSNP
rs965525527 2070 dbSNP
rs1019378831 2075 dbSNP
rs893537804 2078 dbSNP
rs1167192555 2079 dbSNP
rs1379751375 2080 dbSNP
rs1466930410 2090 dbSNP
rs1293899914 2105 dbSNP
rs184189378 2106 dbSNP
rs935078496 2113 dbSNP
rs1437522304 2114 dbSNP
rs548645230 2116 dbSNP
rs111278855 2118 dbSNP
rs1032181836 2121 dbSNP
rs1432827899 2122 dbSNP
rs1303392800 2130 dbSNP
rs1312694485 2137 dbSNP
rs1000778081 2139 dbSNP
rs1253999350 2143 dbSNP
rs1330792408 2151 dbSNP
rs966508129 2156 dbSNP
rs1391684848 2162 dbSNP
rs558303252 2163 dbSNP
rs1013655773 2167 dbSNP
rs1458356996 2168 dbSNP
rs1192418960 2171 dbSNP
rs1270185641 2172 dbSNP
rs1434230273 2172 dbSNP
rs896541923 2183 dbSNP
rs1175859197 2184 dbSNP
rs1055231370 2185 dbSNP
rs377418452 2188 dbSNP
rs371300074 2190 dbSNP
rs991448334 2190 dbSNP
rs6837885 2191 dbSNP
rs111365925 2192 dbSNP
rs1295330522 2192 dbSNP
rs1433073105 2192 dbSNP
rs563397039 2193 dbSNP
rs919414795 2199 dbSNP
rs1228642921 2201 dbSNP
rs200091385 2201 dbSNP
rs1326640249 2212 dbSNP
rs1223187462 2224 dbSNP
rs1265494689 2226 dbSNP
rs1489107575 2233 dbSNP
rs779506741 2237 dbSNP
rs1254971357 2251 dbSNP
rs944905249 2253 dbSNP
rs912264242 2255 dbSNP
rs1473809439 2262 dbSNP
rs1183343129 2270 dbSNP
rs985180279 2281 dbSNP
rs963954017 2282 dbSNP
rs79696350 2305 dbSNP
rs1250194150 2311 dbSNP
rs1207033738 2312 dbSNP
rs893434035 2314 dbSNP
rs1308501564 2325 dbSNP
rs1274859472 2331 dbSNP
rs1287457983 2341 dbSNP
rs749892074 2351 dbSNP
rs1229629691 2357 dbSNP
rs1233109882 2357 dbSNP
rs1368070614 2375 dbSNP
rs979306226 2376 dbSNP
rs189301315 2389 dbSNP
rs967054843 2394 dbSNP
rs1290303565 2412 dbSNP
rs1484303706 2419 dbSNP
rs1372487284 2423 dbSNP
rs1296430249 2428 dbSNP
rs1020891573 2434 dbSNP
rs1045860705 2452 dbSNP
rs906305000 2452 dbSNP
rs950261087 2454 dbSNP
rs894724275 2456 dbSNP
rs574586065 2459 dbSNP
rs960580043 2469 dbSNP
rs1430309856 2472 dbSNP
rs142050100 2476 dbSNP
rs1033760091 2479 dbSNP
rs1368427600 2501 dbSNP
rs184795399 2503 dbSNP
rs887762607 2507 dbSNP
rs1433109998 2509 dbSNP
rs1303009322 2510 dbSNP
rs1377981709 2512 dbSNP
rs941624286 2513 dbSNP
rs191212879 2522 dbSNP
rs1344959882 2523 dbSNP
rs558539352 2543 dbSNP
rs201518600 2548 dbSNP
rs369874537 2548 dbSNP
rs1436372126 2550 dbSNP
rs1212673056 2554 dbSNP
rs930056535 2564 dbSNP
rs1483032973 2568 dbSNP
rs187735680 2569 dbSNP
rs993514369 2574 dbSNP
rs541117721 2577 dbSNP
rs572608716 2578 dbSNP
rs148807945 2592 dbSNP
rs866786612 2593 dbSNP
rs1176480006 2604 dbSNP
rs910760962 2610 dbSNP
rs1449951330 2616 dbSNP
rs144388188 2619 dbSNP
rs932432171 2635 dbSNP
rs1280077822 2640 dbSNP
rs958209636 2642 dbSNP
rs1221336007 2646 dbSNP
rs924931957 2654 dbSNP
rs979044800 2663 dbSNP
rs999623640 2666 dbSNP
rs1201965460 2667 dbSNP
rs1249985351 2668 dbSNP
rs966418376 2669 dbSNP
rs913775989 2681 dbSNP
rs551312178 2683 dbSNP
rs200561330 2687 dbSNP
rs1240324594 2690 dbSNP
rs992126791 2703 dbSNP
rs1191579813 2721 dbSNP
rs537141356 2721 dbSNP
rs1315836213 2731 dbSNP
rs960812374 2733 dbSNP
rs1388897395 2741 dbSNP
rs1456315471 2743 dbSNP
rs894622805 2744 dbSNP
rs1325255365 2747 dbSNP
rs1439165897 2748 dbSNP
rs1033539276 2751 dbSNP
rs1345197729 2755 dbSNP
rs1221926723 2758 dbSNP
rs1393072804 2765 dbSNP
rs1056378498 2769 dbSNP
rs1330049453 2775 dbSNP
rs980832262 2777 dbSNP
rs941606082 2779 dbSNP
rs952085375 2790 dbSNP
rs377255555 2802 dbSNP
rs568422743 2805 dbSNP
rs1199399048 2810 dbSNP
rs897828150 2817 dbSNP
rs1479366006 2832 dbSNP
rs1377474653 2836 dbSNP
rs114318658 2838 dbSNP
rs143994548 2849 dbSNP
rs942781689 2854 dbSNP
rs911030407 2857 dbSNP
rs989748698 2859 dbSNP
rs1324718353 2863 dbSNP
rs1365496489 2867 dbSNP
rs1403560612 2871 dbSNP
rs1257530735 2872 dbSNP
rs58989268 2872 dbSNP
rs766352805 2872 dbSNP
rs1358483131 2873 dbSNP
rs202146265 2873 dbSNP
rs1210493162 2877 dbSNP
rs1289138709 2878 dbSNP
rs1489831286 2889 dbSNP
rs1207097880 2890 dbSNP
rs1252218250 2892 dbSNP
rs889269643 2904 dbSNP
rs1050578035 2908 dbSNP
rs1473195517 2909 dbSNP
rs1179144185 2910 dbSNP
rs936193684 2918 dbSNP
rs184431251 2921 dbSNP
rs1186215522 2931 dbSNP
rs1043464360 2934 dbSNP
rs944999749 2935 dbSNP
rs768157883 2956 dbSNP
rs552879069 2961 dbSNP
rs1423234432 2964 dbSNP
rs373740149 2972 dbSNP
rs369585186 2978 dbSNP
rs1200707137 2981 dbSNP
rs970334620 2982 dbSNP
rs1024601460 2989 dbSNP
rs1327167593 2992 dbSNP
rs563264271 2995 dbSNP
rs1258448084 2997 dbSNP
rs192819675 3001 dbSNP
rs959143333 3006 dbSNP
rs913599807 3009 dbSNP
rs1229760786 3010 dbSNP
rs1230475960 3012 dbSNP
rs529798482 3027 dbSNP
rs560792381 3036 dbSNP
rs1034503332 3040 dbSNP
rs1193844042 3044 dbSNP
rs759775938 3046 dbSNP
rs1442612066 3056 dbSNP
rs1186253081 3068 dbSNP
rs939304831 3072 dbSNP
rs1292643633 3074 dbSNP
rs774780960 3076 dbSNP
rs188017169 3077 dbSNP
rs1391307017 3087 dbSNP
rs1342070664 3088 dbSNP
rs1461852147 3089 dbSNP
rs1335017414 3093 dbSNP
rs1381873443 3096 dbSNP
rs558534685 3102 dbSNP
rs1396778312 3104 dbSNP
rs796597230 3108 dbSNP
rs183004519 3113 dbSNP
rs544900161 3117 dbSNP
rs1437206293 3126 dbSNP
rs1298313365 3130 dbSNP
rs972213382 3130 dbSNP
rs962346154 3135 dbSNP
rs1306844332 3148 dbSNP
rs576869769 3149 dbSNP
rs1018975864 3151 dbSNP
rs1345316188 3158 dbSNP
rs1202568647 3165 dbSNP
rs1260723841 3166 dbSNP
rs1009546034 3168 dbSNP
rs773274595 3171 dbSNP
rs1369414452 3174 dbSNP
rs1249230488 3180 dbSNP
rs1428416409 3183 dbSNP
rs1029215144 3189 dbSNP
rs1379696565 3191 dbSNP
rs1000288608 3194 dbSNP
rs1175904194 3197 dbSNP
rs532813827 3205 dbSNP
rs138444718 3230 dbSNP
rs55698607 3231 dbSNP
rs554747410 3237 dbSNP
rs970630561 3240 dbSNP
rs1303140521 3241 dbSNP
rs1272425703 3243 dbSNP
rs147486815 3244 dbSNP
rs1358126935 3247 dbSNP
rs1222658949 3255 dbSNP
rs1056108680 3256 dbSNP
rs939026553 3257 dbSNP
rs1284552387 3259 dbSNP
rs926491072 3261 dbSNP
rs917567865 3263 dbSNP
rs1208859678 3267 dbSNP
rs1259582976 3268 dbSNP
rs1485847059 3274 dbSNP
rs1203838264 3281 dbSNP
rs1324876452 3284 dbSNP
rs201123503 3285 dbSNP
rs980686453 3285 dbSNP
rs959111016 3300 dbSNP
rs1016460092 3306 dbSNP
rs930459612 3312 dbSNP
rs1435840564 3315 dbSNP
rs1160038420 3320 dbSNP
rs920460779 3322 dbSNP
rs972545282 3323 dbSNP
rs768586967 3324 dbSNP
rs1324387310 3341 dbSNP
rs1005977480 3344 dbSNP
rs962177750 3345 dbSNP
rs1025829948 3347 dbSNP
rs1281113846 3354 dbSNP
rs994393859 3357 dbSNP
rs911982935 3362 dbSNP
rs1305684370 3369 dbSNP
rs1314557424 3380 dbSNP
rs1041049316 3394 dbSNP
rs987463102 3395 dbSNP
rs566135509 3404 dbSNP
rs1267824293 3407 dbSNP
rs953388611 3413 dbSNP
rs1167696842 3415 dbSNP
rs1474655625 3417 dbSNP
rs1370966345 3425 dbSNP
rs552942374 3427 dbSNP
rs114305550 3430 dbSNP
rs968843555 3436 dbSNP
rs1251845065 3437 dbSNP
rs570316642 3439 dbSNP
rs1191266655 3442 dbSNP
rs1453246510 3447 dbSNP
rs1484160900 3449 dbSNP
rs556424799 3451 dbSNP
rs1407514534 3452 dbSNP
rs190824902 3453 dbSNP
rs1385837749 3455 dbSNP
rs1337227819 3458 dbSNP
rs1276988908 3472 dbSNP
rs529624097 3475 dbSNP
rs923748269 3479 dbSNP
rs1297314306 3481 dbSNP
rs892185100 3486 dbSNP
rs1370719328 3499 dbSNP
rs1056623747 3502 dbSNP
rs1232556939 3510 dbSNP
rs1003170174 3514 dbSNP
rs1042229416 3516 dbSNP
rs904898906 3518 dbSNP
rs917870316 3527 dbSNP
rs1344828159 3529 dbSNP
rs1044995423 3532 dbSNP
rs1205655989 3540 dbSNP
rs1332149815 3551 dbSNP
rs930575850 3555 dbSNP
rs1479765812 3558 dbSNP
rs920404800 3559 dbSNP
rs779960087 3560 dbSNP
rs1243778464 3562 dbSNP
rs1443939941 3566 dbSNP
rs1161538740 3578 dbSNP
rs1391934454 3587 dbSNP
rs1408527577 3591 dbSNP
rs1372834518 3604 dbSNP
rs1410389714 3621 dbSNP
rs1036176187 3625 dbSNP
rs1170030077 3636 dbSNP
rs113159261 3637 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293/HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1067870. RNA binding protein: AGO2. Condition:Ago2 IP-seq (mitotic cells) ...

- Kishore S; Gruber AR; Jedlinski DJ; Syed et al., 2013, Genome biology.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aaggUGA-CGAUGUUGGAGGgucu 5'
              |||  ||:|||||||:    
Target 5' --ugACUCACUGCAACCUCUgcc- 3'
1 - 21
Article - Kishore S; Gruber AR; Jedlinski DJ; Syed et al.
- Genome biology, 2013
BACKGROUND: In recent years, a variety of small RNAs derived from other RNAs with well-known functions such as tRNAs and snoRNAs, have been identified. The functional relevance of these RNAs is largely unknown. To gain insight into the complexity of snoRNA processing and the functional relevance of snoRNA-derived small RNAs, we sequence long and short RNAs, small RNAs that co-precipitate with the Argonaute 2 protein and RNA fragments obtained in photoreactive nucleotide-enhanced crosslinking and immunoprecipitation (PAR-CLIP) of core snoRNA-associated proteins. RESULTS: Analysis of these data sets reveals that many loci in the human genome reproducibly give rise to C/D box-like snoRNAs, whose expression and evolutionary conservation are typically less pronounced relative to the snoRNAs that are currently cataloged. We further find that virtually all C/D box snoRNAs are specifically processed inside the regions of terminal complementarity, retaining in the mature form only 4-5 nucleotides upstream of the C box and 2-5 nucleotides downstream of the D box. Sequencing of the total and Argonaute 2-associated populations of small RNAs reveals that despite their cellular abundance, C/D box-derived small RNAs are not efficiently incorporated into the Ago2 protein. CONCLUSIONS: We conclude that the human genome encodes a large number of snoRNAs that are processed along the canonical pathway and expressed at relatively low levels. Generation of snoRNA-derived processing products with alternative, particularly miRNA-like, functions appears to be uncommon.
LinkOut: [PMID: 23706177]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions Prostate Tissue
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRX1760630. RNA binding protein: AGO2. Condition:AGO-CLIP-22RV1_A PAR-CLIP data was present in SRX1760631. RNA binding protein: AGO2. Condition:AGO-CLIP-22RV1_B ...

- Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al., 2016, Neoplasia (New York, N.Y.).

Article - Hamilton MP; Rajapakshe KI; Bader DA; Cerne et al.
- Neoplasia (New York, N.Y.), 2016
MicroRNA (miRNA) deregulation in prostate cancer (PCa) contributes to PCa initiation and metastatic progression. To comprehensively define the cancer-associated changes in miRNA targeting and function in commonly studied models of PCa, we performed photoactivatable ribonucleoside-enhanced cross-linking immunoprecipitation of the Argonaute protein in a panel of PCa cell lines modeling different stages of PCa progression. Using this comprehensive catalogue of miRNA targets, we analyzed miRNA targeting on known drivers of PCa and examined tissue-specific and stage-specific pathway targeting by miRNAs. We found that androgen receptor is the most frequently targeted PCa oncogene and that miR-148a targets the largest number of known PCa drivers. Globally, tissue-specific and stage-specific changes in miRNA targeting are driven by homeostatic response to active oncogenic pathways. Our findings indicate that, even in advanced PCa, the miRNA pool adapts to regulate continuing alterations in the cancer genome to balance oncogenic molecular changes. These findings are important because they are the first to globally characterize miRNA changes in PCa and demonstrate how the miRNA target spectrum responds to staged tumorigenesis.
LinkOut: [PMID: 27292025]
CLIP-seq Support 1 for dataset GSM1067870
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293/HeLa / Ago2 IP-seq (mitotic cells)
Location of target site ENST00000296506.3 | 3UTR | UGACUCACUGCAACCUCUGCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23706177 / GSE43666
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.653 0.27 -0.500 0.33 3 Click to see details
HNSC -0.653 0.27 -0.500 0.33 3 Click to see details
HNSC -0.653 0.27 -0.500 0.33 3 Click to see details
HNSC -0.653 0.27 -0.500 0.33 3 Click to see details
HNSC -0.653 0.27 -0.500 0.33 3 Click to see details
HNSC -0.653 0.27 -0.500 0.33 3 Click to see details
HNSC -0.653 0.27 -0.500 0.33 3 Click to see details
HNSC -0.653 0.27 -0.500 0.33 3 Click to see details
HNSC -0.653 0.27 -0.500 0.33 3 Click to see details
167 hsa-miR-3192-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058548 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT139892 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT207395 MAT2A methionine adenosyltransferase 2A 2 6
MIRT294640 ZNF548 zinc finger protein 548 2 2
MIRT324251 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT441475 BEST3 bestrophin 3 2 2
MIRT445233 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT446763 ZNF491 zinc finger protein 491 2 2
MIRT451003 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 2
MIRT452436 QDPR quinoid dihydropteridine reductase 2 2
MIRT452582 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452950 DISC1 disrupted in schizophrenia 1 2 2
MIRT453309 ZNF394 zinc finger protein 394 2 2
MIRT453810 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT454101 TMEM209 transmembrane protein 209 2 2
MIRT456228 LIX1L limb and CNS expressed 1 like 2 4
MIRT456738 TMEM239 transmembrane protein 239 2 2
MIRT456806 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT457499 SLC35F6 solute carrier family 35 member F6 2 2
MIRT458037 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459041 ZNF490 zinc finger protein 490 2 2
MIRT459135 FADS6 fatty acid desaturase 6 2 2
MIRT460126 CXCL16 C-X-C motif chemokine ligand 16 2 2
MIRT460506 FAM105A family with sequence similarity 105 member A 2 6
MIRT460944 NOA1 nitric oxide associated 1 2 4
MIRT461101 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462641 PHF5A PHD finger protein 5A 2 2
MIRT463584 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466567 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467090 SRRD SRR1 domain containing 2 2
MIRT471093 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472596 NACC1 nucleus accumbens associated 1 2 2
MIRT473084 MORN4 MORN repeat containing 4 2 2
MIRT475977 GTPBP2 GTP binding protein 2 2 2
MIRT477054 FAM210A family with sequence similarity 210 member A 2 2
MIRT478303 DDX19A DEAD-box helicase 19A 2 4
MIRT478489 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478500 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT478858 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479096 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479180 CLSPN claspin 2 2
MIRT479215 CLCC1 chloride channel CLIC like 1 2 2
MIRT481176 AVL9 AVL9 cell migration associated 2 6
MIRT483032 KHSRP KH-type splicing regulatory protein 2 4
MIRT485150 RASL10B RAS like family 10 member B 2 2
MIRT486104 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486319 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT489443 IFNLR1 interferon lambda receptor 1 2 2
MIRT489585 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489702 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490184 TMEM63C transmembrane protein 63C 2 2
MIRT491211 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491276 DHX40 DEAH-box helicase 40 2 2
MIRT495162 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495222 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT496820 CHRNB2 cholinergic receptor nicotinic beta 2 subunit 2 2
MIRT498602 KRT8 keratin 8 2 2
MIRT500003 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT502065 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT508197 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508477 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT509635 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT511039 NRF1 nuclear respiratory factor 1 2 2
MIRT516684 ZNF860 zinc finger protein 860 2 4
MIRT518394 ZNF250 zinc finger protein 250 2 2
MIRT518907 CDC14B cell division cycle 14B 2 2
MIRT520502 TRAM2 translocation associated membrane protein 2 2 6
MIRT521459 RAD51 RAD51 recombinase 2 2
MIRT522354 NCKIPSD NCK interacting protein with SH3 domain 2 4
MIRT522594 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT523267 HIST1H2AE histone cluster 1 H2A family member e 2 2
MIRT523532 GLUL glutamate-ammonia ligase 2 4
MIRT524186 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT526842 PHC1 polyhomeotic homolog 1 2 2
MIRT528729 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT540695 BMP3 bone morphogenetic protein 3 2 2
MIRT544483 TRIM4 tripartite motif containing 4 2 2
MIRT551566 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT563619 ZNF277 zinc finger protein 277 2 2
MIRT564467 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565031 VAV2 vav guanine nucleotide exchange factor 2 2 2
MIRT570294 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT572932 VDAC2 voltage dependent anion channel 2 2 2
MIRT573501 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573675 HES6 hes family bHLH transcription factor 6 2 2
MIRT609619 TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein 2 2
MIRT611966 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT613930 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT617733 ATCAY ATCAY, caytaxin 2 4
MIRT618878 MBL2 mannose binding lectin 2 2 2
MIRT627590 SHROOM3 shroom family member 3 2 2
MIRT628516 ZNF878 zinc finger protein 878 2 2
MIRT633964 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT634530 NEGR1 neuronal growth regulator 1 2 2
MIRT635455 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT636412 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT639672 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642667 RGS6 regulator of G protein signaling 6 2 2
MIRT644080 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT647318 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647942 RNF152 ring finger protein 152 2 2
MIRT648687 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT648817 ZNF689 zinc finger protein 689 2 2
MIRT650347 TREM1 triggering receptor expressed on myeloid cells 1 2 2
MIRT650374 MOCS3 molybdenum cofactor synthesis 3 2 4
MIRT655935 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT663778 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT664297 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT665842 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT668929 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT669673 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669907 KIAA0754 KIAA0754 2 4
MIRT670248 TRIM13 tripartite motif containing 13 2 2
MIRT670368 ULBP3 UL16 binding protein 3 2 4
MIRT670642 BVES blood vessel epicardial substance 2 2
MIRT670749 HOOK3 hook microtubule tethering protein 3 2 2
MIRT671184 ZNF891 zinc finger protein 891 2 2
MIRT673946 ZNF500 zinc finger protein 500 2 2
MIRT674682 PLCE1 phospholipase C epsilon 1 2 2
MIRT677912 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678876 FAM118A family with sequence similarity 118 member A 2 2
MIRT679528 RAB36 RAB36, member RAS oncogene family 2 2
MIRT680589 ZNF573 zinc finger protein 573 2 2
MIRT680650 KIAA1456 KIAA1456 2 2
MIRT681149 INTS7 integrator complex subunit 7 2 2
MIRT681177 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681234 DUSP19 dual specificity phosphatase 19 2 2
MIRT681626 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681643 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT681926 KAT7 lysine acetyltransferase 7 2 2
MIRT682050 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT682156 SMS spermine synthase 2 2
MIRT683555 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684304 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT684458 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT685986 CCDC77 coiled-coil domain containing 77 2 2
MIRT686782 AZF1 azoospermia factor 1 2 2
MIRT687329 OSMR oncostatin M receptor 2 2
MIRT687629 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT688792 CCNB1 cyclin B1 2 2
MIRT689756 PRR13 proline rich 13 2 2
MIRT690823 SGSM2 small G protein signaling modulator 2 2 2
MIRT691310 ZNF681 zinc finger protein 681 2 2
MIRT692676 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT693508 MOB3A MOB kinase activator 3A 2 2
MIRT694657 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694889 ZNF417 zinc finger protein 417 2 2
MIRT695740 ZNF117 zinc finger protein 117 2 2
MIRT697101 GPKOW G-patch domain and KOW motifs 2 2
MIRT698968 SPAST spastin 2 2
MIRT700379 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT703930 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT706234 SYT15 synaptotagmin 15 2 2
MIRT706494 SEPT6 septin 6 2 2
MIRT710451 BTNL3 butyrophilin like 3 2 2
MIRT711684 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT711997 F9 coagulation factor IX 2 2
MIRT712727 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713111 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT713156 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT713440 AJAP1 adherens junctions associated protein 1 2 2
MIRT713830 NUP98 nucleoporin 98 2 2
MIRT714979 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717411 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT718433 ZNF85 zinc finger protein 85 2 2
MIRT720575 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT725098 TMEM120B transmembrane protein 120B 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3192 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3192 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3192 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3192-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3192-5p Platinum 23939 resistant tissue
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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