pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SLC11A2   
Synonyms AHMIO1, DCT1, DMT1, NRAMP2
Description solute carrier family 11 member 2
Transcript NM_000617   
Other Transcripts NM_001174125 , NM_001174126 , NM_001174127 , NM_001174128 , NM_001174129 , NM_001174130   
Expression
Putative miRNA Targets on SLC11A2
3'UTR of SLC11A2
(miRNA target sites are highlighted)
>SLC11A2|NM_000617|3'UTR
   1 CACTGGATTAGTCTGTCTTCTGCAGGTAGCCATCAGAGCCAGTGTGTTTCTATGGTTTACTGTGTGAACATAGCCAAAAG
  81 TATGTGCCGTTGCACAGACTGTGTTTATGACTCAACCGTTGGTTGGAAAAGACTTTGTTTCATGTGTATTTGAAAGATGG
 161 AATTATTTTTTCCTTCCTGACCTAACCTTAGAACTGGATTAGGGTGGGATCTTTGAAAAGCTGACATTTGCTGCTATCAT
 241 TCCAACACTAAATTCTTAAGTAGTTGCCCAAGGGCCAGCTCAGTTTATCCTTCGGAGAGACAAGGATATGCATGATTCTT
 321 AACCAGGCTATATGTTAAAAAAAAATTGGAAAATGCAATACATTTTTTATTATACAAACTACAGAATGAGTATGCAAGTT
 401 TTATTTATCAAAATGTAATGGATTTTTAAAGGCTGAGAAATTTTCCTTATACCTACCTTTTCAGTTATTTTAATTATACC
 481 AAATTATCAACTAGAATAGCTTCATCCATATGAAATATAAAATGAAGAGACACCTAGCTCTATCAGGCTTAGGATTCTTT
 561 GAACTTATTTCCACTTTAATTTCTCAGTGGAAGTTAAGAGGGGTGAGAAAACAAAGAAGGGGAAAAACTGACAACTAACA
 641 AAACCAGCACCACATCGCTAGGTGGTGCTTACTAATTACCTTCTCAGGATTTTCCTCAGATTGAAAAGCTTATGAGGATT
 721 TCTTGGGAGTCTTAATAACCTGCCTGTTAGTACAGAGCTTTCCTGATGATATTTACTCTTGAGCACATGTGGTTGTAAAA
 801 CCTTAACTTTCTTTCTCCAGGAGGGTGGTGATAGAAACAGATGGTAGTATTTATGAACTGATGTTCTCGTGAAATGTTGA
 881 GGGTGGGGAGAAAAGACTTTAAGGGAGGAGAGCCATCTATTTTGTTCCTAAAGCCACCTCTCAGCAGAATCGTCATGTTT
 961 TTCTGATGCACCGCTCTGCTTCATGCCCAAGATGACTTGCGAGGCAATCTCAGGAGCTGTGGACTTAACCGTTGCAAAGC
1041 ACACTGTCTTTCTCAGCGTTCTCTGCAAGTCAGTAGGTGTTAGTATGGTTGCAAAGTTCACTGTCTCAGCAAAGTTGAAC
1121 TGGGCTACCTCTCTACAGCTGTTTCCTCAGAGGGAAAAATCTTGAGACCAGATGGTGGAGCTCTGGAGTCAGAGGAAATG
1201 GGTGTCTTCAGCACAAAGCTGCTGCTTTTACTTCAGCCACTTCTGACATTTTTACATACCGAGCCTGAGATTGTGTGATT
1281 ATCTCAAATCAAATCACTTTGATGGAGATAAATAATCAAAACTGTTTTATAGTCATTGATTTGGTGAGAACAGTAATGGA
1361 AAATGGTGTTGAAGGACTTCTCATTTTTGGAGCTTTCCTTCCAGAGTCCTGGCTGATTGGTGTTCGCTGTTCATCTGAGC
1441 CCCCAAAAGCATTATTACTGATACTTGCACACAGTCAAAAGCGCAGACTGGATGGATGGTCTTTTATAAGGCATTTAAGG
1521 GTACACTACTGTGTTTCACTGACCATACATTTTTCTTAGCCCCTCAAGTAATATAGCACAGAGTTATGAATGACAATTCC
1601 CCTAACCATTCCTCTTCATATCTGCCTCTTCCCCTTACCATCGTAATTCTCCAAACTGGTCATAAAGGCACTCTGTGAAG
1681 ATATTGGGGACTGACATCTTAAGCTCTCACCTGGCTGCAGTAGGAAAGGCCAAACTGACGACAAAAAAAAAATTCTTTAT
1761 AAAGATGATATGGTAACATGTATCTTTGCCCTGGGTCTGGGTGGGTCCAGTCAGTCTCAGATTTACAAGCATTTAGGAGC
1841 CTAGGTAAAAGCTGCTAGTATTCTTTTAAAAGTTATATTTATGACTTGCAATGATAGAAAACTCCTTCCAATTAAATGGC
1921 ATTTTATAATATTATGTGTGTACTTCACAGTGTTAAAAATACCCTCATACGTTATTGCATTTGATCTTCACAGAAAGTGC
2001 ATTTTAACCAGTACTCTGGGTGCAATAAATAATATGTAGAAATTTAAGTCCTCCAATTCCAGCATATCCAGTGAGTTTTG
2081 ACAGTGTGTTTATGTGGAATGTTTAAGGATATACAATTGTACTTTATATAAATTGGTTCTTGTTCTTCTTAAATGTGACA
2161 TGAAATAATTGTGCTGCTACATTATACTGGAAATTAACAGGGGAAAAGGGAAGAGCTCTTGGCTCCCTTGAGGTTCTGCT
2241 AGTGGTGTTAGGAGTGGTTACAACTGAGCTTTTAGTAACCATTTAACCGTATGTAAACTTGGTTTCTAATTAAAAAAAAA
2321 TTTCTTTTTCCAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gguAGAAGGAAGUCGGag 5'
             |:|| ||||||||  
Target 5' tgcTTTTACTTCAGCCac 3'
1223 - 1240 143.00 -13.70
2
miRNA  3' gguagaAGG-AAGUCGGAg 5'
                |||  ||||:|| 
Target 5' ggtgggTCCAGTCAGTCTc 3'
1800 - 1818 128.00 -14.30
3
miRNA  3' ggUAGAAGGAAGUCGGAg 5'
            :||||:| ||||| | 
Target 5' ctGTCTTTC-TCAGCGTt 3'
1044 - 1060 127.00 -14.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
309303 11 ClinVar
309302 32 ClinVar
309301 153 ClinVar
883596 295 ClinVar
309300 358 ClinVar
309299 390 ClinVar
309298 415 ClinVar
309297 420 ClinVar
309296 546 ClinVar
882810 716 ClinVar
882809 789 ClinVar
309295 872 ClinVar
309294 970 ClinVar
309293 985 ClinVar
309292 986 ClinVar
309291 1007 ClinVar
309290 1031 ClinVar
881184 1057 ClinVar
881183 1058 ClinVar
309289 1215 ClinVar
309288 1261 ClinVar
309287 1273 ClinVar
881182 1360 ClinVar
881181 1367 ClinVar
881180 1444 ClinVar
309286 1467 ClinVar
309285 1486 ClinVar
309284 1559 ClinVar
309283 1599 ClinVar
882760 1615 ClinVar
882759 1739 ClinVar
309282 1753 ClinVar
882758 1795 ClinVar
309281 1876 ClinVar
309280 1902 ClinVar
309279 1949 ClinVar
309278 2085 ClinVar
309277 2289 ClinVar
309276 2321 ClinVar
881136 2332 ClinVar
COSN24705496 1 COSMIC
COSN30510633 5 COSMIC
COSN30517506 20 COSMIC
COSN30489650 88 COSMIC
COSN5945790 89 COSMIC
COSN24014951 289 COSMIC
COSN1575836 460 COSMIC
COSN28547775 544 COSMIC
COSN17181744 709 COSMIC
COSN30423131 731 COSMIC
COSN20986313 817 COSMIC
COSN29277676 1030 COSMIC
COSN22278474 1209 COSMIC
COSN7373315 1285 COSMIC
COSN29540211 1742 COSMIC
COSN20109575 1743 COSMIC
COSN15107875 2289 COSMIC
COSN5945789 2302 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs779127497 1 dbSNP
rs755553232 3 dbSNP
rs1370565577 4 dbSNP
rs954282535 5 dbSNP
rs749794949 7 dbSNP
rs903163485 10 dbSNP
rs201382454 11 dbSNP
rs1432365644 13 dbSNP
rs1365212060 21 dbSNP
rs1321831576 22 dbSNP
rs756262905 23 dbSNP
rs1452323992 25 dbSNP
rs750524130 26 dbSNP
rs886049565 32 dbSNP
rs979394886 34 dbSNP
rs767908116 38 dbSNP
rs1419154796 39 dbSNP
rs1361593841 41 dbSNP
rs545806943 52 dbSNP
rs1419140880 66 dbSNP
rs763634560 69 dbSNP
rs1266669681 79 dbSNP
rs1476441670 80 dbSNP
rs1394457676 81 dbSNP
rs781190264 88 dbSNP
rs1182949352 89 dbSNP
rs764971858 95 dbSNP
rs1244870071 97 dbSNP
rs1210627357 103 dbSNP
rs1306704059 105 dbSNP
rs371736382 115 dbSNP
rs776447248 117 dbSNP
rs766238984 118 dbSNP
rs760246899 128 dbSNP
rs1326607173 131 dbSNP
rs188179273 136 dbSNP
rs771763859 144 dbSNP
rs1305103339 147 dbSNP
rs747728769 148 dbSNP
rs146016854 153 dbSNP
rs1327133115 155 dbSNP
rs367902302 158 dbSNP
rs1035488223 161 dbSNP
rs41510444 164 dbSNP
rs1467084790 165 dbSNP
rs529830430 167 dbSNP
rs1163064457 180 dbSNP
rs749596220 181 dbSNP
rs927684512 189 dbSNP
rs981881706 194 dbSNP
rs961432580 201 dbSNP
rs1048369641 202 dbSNP
rs1480196348 203 dbSNP
rs1371603195 211 dbSNP
rs1477535289 221 dbSNP
rs1230921676 222 dbSNP
rs542538964 223 dbSNP
rs984195678 224 dbSNP
rs1290565664 229 dbSNP
rs1219702138 236 dbSNP
rs1460359516 244 dbSNP
rs756673561 249 dbSNP
rs147543992 250 dbSNP
rs1229346397 260 dbSNP
rs1373097398 264 dbSNP
rs896802347 267 dbSNP
rs1412040711 271 dbSNP
rs1371470513 274 dbSNP
rs143304230 276 dbSNP
rs1302778651 280 dbSNP
rs1422830441 289 dbSNP
rs1351635152 293 dbSNP
rs1165433382 294 dbSNP
rs745991716 296 dbSNP
rs1405668715 303 dbSNP
rs952658417 308 dbSNP
rs781388985 309 dbSNP
rs1486710538 310 dbSNP
rs1472793134 318 dbSNP
rs1267737818 323 dbSNP
rs1219724060 328 dbSNP
rs943769309 330 dbSNP
rs1490703003 332 dbSNP
rs1265477332 333 dbSNP
rs912303340 335 dbSNP
rs1214424382 336 dbSNP
rs1316894445 337 dbSNP
rs185716790 339 dbSNP
rs1188687683 346 dbSNP
rs745644051 346 dbSNP
rs932848760 347 dbSNP
rs1164668537 355 dbSNP
rs1364941701 356 dbSNP
rs2285230 358 dbSNP
rs996624195 362 dbSNP
rs575183627 365 dbSNP
rs1415039147 370 dbSNP
rs556916905 371 dbSNP
rs1403286064 374 dbSNP
rs1019426878 378 dbSNP
rs224446 390 dbSNP
rs142574280 392 dbSNP
rs1453124934 393 dbSNP
rs754734883 409 dbSNP
rs1236542458 413 dbSNP
rs765348165 415 dbSNP
rs886049564 420 dbSNP
rs1428277887 421 dbSNP
rs1196878381 431 dbSNP
rs1434587117 432 dbSNP
rs1267586380 433 dbSNP
rs1185488827 437 dbSNP
rs1484606889 440 dbSNP
rs779038580 441 dbSNP
rs759580400 442 dbSNP
rs1211066738 446 dbSNP
rs1056086048 447 dbSNP
rs1262950331 449 dbSNP
rs1347865063 450 dbSNP
rs1222039807 453 dbSNP
rs1284468966 463 dbSNP
rs1034212707 476 dbSNP
rs1302235618 477 dbSNP
rs574989172 478 dbSNP
rs1421408215 482 dbSNP
rs1359882946 483 dbSNP
rs149602502 486 dbSNP
rs1435673239 500 dbSNP
rs1405227484 501 dbSNP
rs1174060831 504 dbSNP
rs1380109228 508 dbSNP
rs1467378043 517 dbSNP
rs1377911222 533 dbSNP
rs1319938403 536 dbSNP
rs938812945 540 dbSNP
rs193030246 546 dbSNP
rs1373298638 554 dbSNP
rs1426235786 558 dbSNP
rs766363673 559 dbSNP
rs1036540629 564 dbSNP
rs766464377 568 dbSNP
rs1243054608 571 dbSNP
rs1308502648 582 dbSNP
rs1173551373 585 dbSNP
rs760586326 593 dbSNP
rs1484403147 596 dbSNP
rs1026837943 598 dbSNP
rs772752245 600 dbSNP
rs1282739125 601 dbSNP
rs761116058 603 dbSNP
rs1169861111 613 dbSNP
rs1251983717 615 dbSNP
rs766970834 618 dbSNP
rs983796975 621 dbSNP
rs952514604 627 dbSNP
rs921163766 634 dbSNP
rs1238153516 635 dbSNP
rs1454969546 637 dbSNP
rs1229205195 653 dbSNP
rs572570102 654 dbSNP
rs552634630 656 dbSNP
rs535029460 657 dbSNP
rs1402577361 662 dbSNP
rs1297276070 672 dbSNP
rs1170485999 676 dbSNP
rs1460118711 678 dbSNP
rs1355743055 686 dbSNP
rs943741572 698 dbSNP
rs1019370012 713 dbSNP
rs571129669 716 dbSNP
rs1168738323 719 dbSNP
rs1443471656 725 dbSNP
rs1049972973 727 dbSNP
rs1442749138 738 dbSNP
rs1185975315 740 dbSNP
rs1300995756 742 dbSNP
rs1365690673 749 dbSNP
rs1425948375 750 dbSNP
rs967484274 753 dbSNP
rs552810613 771 dbSNP
rs932805907 772 dbSNP
rs768346443 776 dbSNP
rs1195558468 778 dbSNP
rs771164993 781 dbSNP
rs772485740 784 dbSNP
rs1277023017 786 dbSNP
rs79206015 789 dbSNP
rs1043878932 790 dbSNP
rs564071030 791 dbSNP
rs1246843113 792 dbSNP
rs1340879882 793 dbSNP
rs1055821766 796 dbSNP
rs1389443752 804 dbSNP
rs1251556700 808 dbSNP
rs1372091298 811 dbSNP
rs1308186229 815 dbSNP
rs914193414 816 dbSNP
rs1423467361 818 dbSNP
rs1003093319 819 dbSNP
rs376188378 824 dbSNP
rs907456272 828 dbSNP
rs1186724025 840 dbSNP
rs1363110910 843 dbSNP
rs1426217147 846 dbSNP
rs757182678 849 dbSNP
rs775972186 850 dbSNP
rs1369531940 860 dbSNP
rs1181616559 862 dbSNP
rs1395049104 868 dbSNP
rs992162970 868 dbSNP
rs111817978 869 dbSNP
rs73297974 872 dbSNP
rs537304184 877 dbSNP
rs1490214743 882 dbSNP
rs926708595 883 dbSNP
rs940890290 885 dbSNP
rs952121771 886 dbSNP
rs746407483 909 dbSNP
rs886850357 910 dbSNP
rs1454175641 919 dbSNP
rs1260067465 924 dbSNP
rs1026785314 928 dbSNP
rs1330644668 929 dbSNP
rs1352034830 934 dbSNP
rs1288611430 935 dbSNP
rs995342892 937 dbSNP
rs1328963675 939 dbSNP
rs1325007280 941 dbSNP
rs781745738 942 dbSNP
rs961282994 951 dbSNP
rs182125518 952 dbSNP
rs1158430079 955 dbSNP
rs1048644048 966 dbSNP
rs1414589608 968 dbSNP
rs886049563 970 dbSNP
rs1160228377 971 dbSNP
rs774980110 972 dbSNP
rs1015963346 973 dbSNP
rs1201172945 979 dbSNP
rs920903497 980 dbSNP
rs886049562 985 dbSNP
rs886049561 986 dbSNP
rs537388261 989 dbSNP
rs1384909507 990 dbSNP
rs747044356 1000 dbSNP
rs150426997 1001 dbSNP
rs1049425900 1002 dbSNP
rs1222650419 1005 dbSNP
rs886049560 1007 dbSNP
rs758635229 1010 dbSNP
rs1276246528 1011 dbSNP
rs1436579362 1015 dbSNP
rs1325294312 1020 dbSNP
rs753676302 1021 dbSNP
rs1356147994 1024 dbSNP
rs1433482436 1030 dbSNP
rs150909 1031 dbSNP
rs903612741 1038 dbSNP
rs779795966 1041 dbSNP
rs755867482 1042 dbSNP
rs1174471958 1043 dbSNP
rs912517049 1044 dbSNP
rs750386714 1045 dbSNP
rs1257846539 1048 dbSNP
rs190239649 1054 dbSNP
rs767436028 1057 dbSNP
rs41398049 1058 dbSNP
rs1470478994 1064 dbSNP
rs114477310 1072 dbSNP
rs77629814 1076 dbSNP
rs72561484 1080 dbSNP
rs990615340 1083 dbSNP
rs1202874826 1088 dbSNP
rs763696315 1090 dbSNP
rs1405483209 1093 dbSNP
rs939637159 1094 dbSNP
rs1219397046 1095 dbSNP
rs926587901 1099 dbSNP
rs1376368035 1107 dbSNP
rs1294824620 1109 dbSNP
rs1229949969 1111 dbSNP
rs756275201 1124 dbSNP
rs1321729546 1129 dbSNP
rs1447776505 1131 dbSNP
rs1443597062 1132 dbSNP
rs1357732484 1133 dbSNP
rs980776420 1134 dbSNP
rs1439937706 1136 dbSNP
rs775291249 1149 dbSNP
rs866778898 1151 dbSNP
rs1239951183 1162 dbSNP
rs1329440854 1170 dbSNP
rs1415297199 1172 dbSNP
rs958790909 1175 dbSNP
rs1370159689 1178 dbSNP
rs1034312003 1180 dbSNP
rs1002914988 1186 dbSNP
rs1166854701 1189 dbSNP
rs1404593733 1201 dbSNP
rs762674290 1202 dbSNP
rs920717648 1204 dbSNP
rs973895202 1206 dbSNP
rs769260493 1212 dbSNP
rs1015493907 1214 dbSNP
rs17125172 1215 dbSNP
rs745529197 1238 dbSNP
rs1436916619 1249 dbSNP
rs887921862 1256 dbSNP
rs1272030786 1260 dbSNP
rs60725885 1261 dbSNP
rs777290057 1264 dbSNP
rs1467797990 1267 dbSNP
rs11169654 1273 dbSNP
rs899592573 1275 dbSNP
rs1401542006 1287 dbSNP
rs1377581254 1288 dbSNP
rs996505421 1292 dbSNP
rs1398821913 1293 dbSNP
rs186973090 1297 dbSNP
rs747124260 1298 dbSNP
rs777876037 1299 dbSNP
rs1306339197 1300 dbSNP
rs772230183 1305 dbSNP
rs1043482328 1312 dbSNP
rs1273931303 1316 dbSNP
rs1371191505 1316 dbSNP
rs1339461668 1318 dbSNP
rs1197106807 1319 dbSNP
rs34220901 1322 dbSNP
rs1256004976 1329 dbSNP
rs1457274917 1330 dbSNP
rs1164037951 1332 dbSNP
rs748388993 1339 dbSNP
rs12480 1343 dbSNP
rs138011955 1344 dbSNP
rs1182297235 1354 dbSNP
rs573581505 1360 dbSNP
rs1249176383 1365 dbSNP
rs1235162595 1367 dbSNP
rs1196991255 1370 dbSNP
rs1183828742 1376 dbSNP
rs142166519 1381 dbSNP
rs1475778564 1382 dbSNP
rs912465753 1384 dbSNP
rs1056647247 1397 dbSNP
rs1218714195 1398 dbSNP
rs1398667309 1399 dbSNP
rs1320499725 1401 dbSNP
rs1465581386 1402 dbSNP
rs939564318 1404 dbSNP
rs1397114191 1417 dbSNP
rs1229254422 1419 dbSNP
rs1350193753 1425 dbSNP
rs977765058 1426 dbSNP
rs1289988644 1435 dbSNP
rs1326664936 1435 dbSNP
rs946003076 1444 dbSNP
rs1359628714 1459 dbSNP
rs1317186135 1460 dbSNP
rs920666715 1461 dbSNP
rs1293068694 1462 dbSNP
rs972167048 1463 dbSNP
rs1434388285 1464 dbSNP
rs561463670 1467 dbSNP
rs1280115135 1468 dbSNP
rs1195873415 1471 dbSNP
rs940806544 1478 dbSNP
rs746988310 1482 dbSNP
rs757190615 1483 dbSNP
rs1409436768 1485 dbSNP
rs116731209 1486 dbSNP
rs1472741641 1491 dbSNP
rs1163060001 1493 dbSNP
rs1385168696 1497 dbSNP
rs1401500940 1498 dbSNP
rs955466891 1502 dbSNP
rs1028228620 1504 dbSNP
rs1189018488 1505 dbSNP
rs1489136390 1510 dbSNP
rs1248979459 1515 dbSNP
rs1222889526 1517 dbSNP
rs1328945061 1521 dbSNP
rs1266671737 1523 dbSNP
rs1312526294 1525 dbSNP
rs1366487834 1527 dbSNP
rs1230601239 1528 dbSNP
rs990002369 1531 dbSNP
rs1330149628 1533 dbSNP
rs1243722591 1540 dbSNP
rs1261116613 1544 dbSNP
rs975035056 1545 dbSNP
rs763684336 1547 dbSNP
rs1369752486 1548 dbSNP
rs1294071430 1555 dbSNP
rs1434329496 1556 dbSNP
rs777649881 1559 dbSNP
rs1178309174 1562 dbSNP
rs1322363363 1563 dbSNP
rs762513303 1573 dbSNP
rs542347738 1574 dbSNP
rs1173448058 1582 dbSNP
rs144968585 1583 dbSNP
rs1258805738 1587 dbSNP
rs760035407 1591 dbSNP
rs1187354119 1592 dbSNP
rs1464883782 1596 dbSNP
rs886049559 1599 dbSNP
rs557225035 1615 dbSNP
rs1164473451 1617 dbSNP
rs1486361506 1624 dbSNP
rs537671498 1625 dbSNP
rs1255647819 1633 dbSNP
rs1231278482 1634 dbSNP
rs1421953248 1635 dbSNP
rs1314130315 1638 dbSNP
rs1156440998 1640 dbSNP
rs578240585 1642 dbSNP
rs761220255 1643 dbSNP
rs1213184195 1645 dbSNP
rs971412714 1647 dbSNP
rs1284299360 1650 dbSNP
rs1363027768 1651 dbSNP
rs755397829 1658 dbSNP
rs1299645587 1662 dbSNP
rs1321259443 1670 dbSNP
rs773539780 1671 dbSNP
rs755074642 1681 dbSNP
rs772166626 1683 dbSNP
rs191887833 1684 dbSNP
rs1359360311 1688 dbSNP
rs1167482223 1691 dbSNP
rs1005518516 1693 dbSNP
rs1405398595 1695 dbSNP
rs1388869024 1696 dbSNP
rs1191000852 1701 dbSNP
rs1429510431 1702 dbSNP
rs186583435 1706 dbSNP
rs1028196487 1714 dbSNP
rs1428836172 1718 dbSNP
rs1353280800 1720 dbSNP
rs1045371340 1721 dbSNP
rs748156013 1728 dbSNP
rs1281300098 1736 dbSNP
rs1204527545 1737 dbSNP
rs766628921 1739 dbSNP
rs1276715869 1740 dbSNP
rs751992159 1741 dbSNP
rs1229004333 1742 dbSNP
rs899143415 1745 dbSNP
rs1177160892 1747 dbSNP
rs1379241840 1748 dbSNP
rs1036379403 1753 dbSNP
rs1356900378 1753 dbSNP
rs755515112 1753 dbSNP
rs763680321 1753 dbSNP
rs1310375877 1755 dbSNP
rs1298675999 1758 dbSNP
rs1397552284 1763 dbSNP
rs1379530493 1767 dbSNP
rs1427888009 1769 dbSNP
rs1306959601 1776 dbSNP
rs59280115 1778 dbSNP
rs796672052 1780 dbSNP
rs750648046 1795 dbSNP
rs1261410748 1797 dbSNP
rs921160441 1799 dbSNP
rs375705399 1803 dbSNP
rs1462986488 1809 dbSNP
rs1368383865 1816 dbSNP
rs1185950634 1826 dbSNP
rs1425855603 1829 dbSNP
rs975276787 1836 dbSNP
rs1258502908 1838 dbSNP
rs1181669166 1839 dbSNP
rs1482132675 1840 dbSNP
rs1276911768 1843 dbSNP
rs1196432616 1850 dbSNP
rs1459489486 1854 dbSNP
rs1355628978 1864 dbSNP
rs1202547206 1866 dbSNP
rs1263609693 1867 dbSNP
rs967949766 1874 dbSNP
rs149411 1876 dbSNP
rs1335176445 1877 dbSNP
rs756970075 1878 dbSNP
rs1287353469 1890 dbSNP
rs956658272 1891 dbSNP
rs1351922005 1893 dbSNP
rs1308169090 1897 dbSNP
rs1385727145 1898 dbSNP
rs1390648200 1900 dbSNP
rs886049558 1902 dbSNP
rs1459788155 1909 dbSNP
rs528056084 1936 dbSNP
rs72561485 1949 dbSNP
rs1295497047 1950 dbSNP
rs1438421757 1950 dbSNP
rs377220960 1953 dbSNP
rs144174412 1959 dbSNP
rs1278938576 1960 dbSNP
rs1320569932 1960 dbSNP
rs1254231815 1962 dbSNP
rs777505507 1967 dbSNP
rs1023830008 1970 dbSNP
rs563773129 1971 dbSNP
rs1211517744 1985 dbSNP
rs1468831526 1986 dbSNP
rs945920509 1992 dbSNP
rs899426163 1993 dbSNP
rs1267314890 1996 dbSNP
rs1226329247 1997 dbSNP
rs914533926 1998 dbSNP
rs1330851587 2013 dbSNP
rs1279701361 2036 dbSNP
rs372821814 2038 dbSNP
rs530604780 2044 dbSNP
rs775017037 2051 dbSNP
rs1322181102 2053 dbSNP
rs1389076740 2056 dbSNP
rs764636192 2058 dbSNP
rs1004916799 2063 dbSNP
rs890522494 2070 dbSNP
rs1455972390 2078 dbSNP
rs1414476724 2079 dbSNP
rs981499182 2082 dbSNP
rs886049557 2085 dbSNP
rs971482919 2085 dbSNP
rs1418566593 2088 dbSNP
rs1477754971 2092 dbSNP
rs1051879616 2107 dbSNP
rs1375962346 2108 dbSNP
rs907831818 2111 dbSNP
rs983471305 2112 dbSNP
rs1201057442 2114 dbSNP
rs1454699218 2115 dbSNP
rs184114633 2117 dbSNP
rs1206591802 2119 dbSNP
rs1299072635 2119 dbSNP
rs1278051631 2125 dbSNP
rs1357690594 2128 dbSNP
rs1466041660 2130 dbSNP
rs1284546513 2136 dbSNP
rs1230339946 2137 dbSNP
rs1372870696 2142 dbSNP
rs1321539729 2146 dbSNP
rs1199486492 2147 dbSNP
rs551258639 2148 dbSNP
rs1039519772 2151 dbSNP
rs762702736 2151 dbSNP
rs921067168 2151 dbSNP
rs141880064 2153 dbSNP
rs1027942440 2159 dbSNP
rs1182560890 2162 dbSNP
rs1372449229 2163 dbSNP
rs1297430797 2171 dbSNP
rs1433371177 2174 dbSNP
rs765049101 2180 dbSNP
rs1319269559 2182 dbSNP
rs1414164826 2186 dbSNP
rs1400313899 2194 dbSNP
rs1174454942 2201 dbSNP
rs1381033514 2206 dbSNP
rs762552222 2210 dbSNP
rs1244396830 2225 dbSNP
rs915198738 2230 dbSNP
rs559045140 2231 dbSNP
rs964873556 2232 dbSNP
rs956428196 2238 dbSNP
rs1480232566 2247 dbSNP
rs1249420140 2256 dbSNP
rs1341551680 2258 dbSNP
rs542609450 2261 dbSNP
rs1282991574 2267 dbSNP
rs1186540396 2269 dbSNP
rs1019089908 2270 dbSNP
rs1241408437 2271 dbSNP
rs1287640491 2273 dbSNP
rs1351076255 2279 dbSNP
rs1393583245 2280 dbSNP
rs1007903841 2288 dbSNP
rs867212578 2289 dbSNP
rs969141095 2293 dbSNP
rs573624530 2295 dbSNP
rs1207909695 2306 dbSNP
rs754201482 2312 dbSNP
rs1041774078 2319 dbSNP
rs1009938138 2320 dbSNP
rs1382350564 2321 dbSNP
rs141968385 2321 dbSNP
rs763361132 2321 dbSNP
rs1440396355 2322 dbSNP
rs893029060 2324 dbSNP
rs1054395639 2325 dbSNP
rs563410514 2326 dbSNP
rs575495762 2332 dbSNP
rs377068307 2333 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293/HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1067870. RNA binding protein: AGO2. Condition:Ago2 IP-seq (mitotic cells) ...

- Kishore S; Gruber AR; Jedlinski DJ; Syed et al., 2013, Genome biology.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            |||| |||   ||||||| 
Target 5' ugAUCUACCUGCCUCAGCCUc 3'
4 - 24
Article - Kishore S; Gruber AR; Jedlinski DJ; Syed et al.
- Genome biology, 2013
BACKGROUND: In recent years, a variety of small RNAs derived from other RNAs with well-known functions such as tRNAs and snoRNAs, have been identified. The functional relevance of these RNAs is largely unknown. To gain insight into the complexity of snoRNA processing and the functional relevance of snoRNA-derived small RNAs, we sequence long and short RNAs, small RNAs that co-precipitate with the Argonaute 2 protein and RNA fragments obtained in photoreactive nucleotide-enhanced crosslinking and immunoprecipitation (PAR-CLIP) of core snoRNA-associated proteins. RESULTS: Analysis of these data sets reveals that many loci in the human genome reproducibly give rise to C/D box-like snoRNAs, whose expression and evolutionary conservation are typically less pronounced relative to the snoRNAs that are currently cataloged. We further find that virtually all C/D box snoRNAs are specifically processed inside the regions of terminal complementarity, retaining in the mature form only 4-5 nucleotides upstream of the C box and 2-5 nucleotides downstream of the D box. Sequencing of the total and Argonaute 2-associated populations of small RNAs reveals that despite their cellular abundance, C/D box-derived small RNAs are not efficiently incorporated into the Ago2 protein. CONCLUSIONS: We conclude that the human genome encodes a large number of snoRNAs that are processed along the canonical pathway and expressed at relatively low levels. Generation of snoRNA-derived processing products with alternative, particularly miRNA-like, functions appears to be uncommon.
LinkOut: [PMID: 23706177]
CLIP-seq Support 1 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_001174127 | 3UTR | AUUUUUAGUGGAGAUGGGGUUUCACCAUGUUGGCCAGGCUGGUCUCAAACUCUUGACCUCAAGUGAUCUACCUGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1067870
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293/HeLa / Ago2 IP-seq (mitotic cells)
Location of target site ENST00000262051.7 | 3UTR | AAGUGAUCUACCUGCCUCAGCCUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23706177 / GSE43666
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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