miRTarBase - #MIRT681926


—
pre-miRNA Information
pre-miRNA hsa-mir-3192   
Genomic Coordinates chr20: 18470615 - 18470691
Description Homo sapiens miR-3192 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3192-5p
Sequence 10| UCUGGGAGGUUGUAGCAGUGGAA |32
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906254403 3 dbSNP
rs554130490 4 dbSNP
rs773140898 6 dbSNP
rs376614009 11 dbSNP
rs899297329 12 dbSNP
rs1330418015 18 dbSNP
rs1402597660 21 dbSNP
rs995052311 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol KAT7   
Synonyms HBO1, HBOA, MYST2, ZC2HC7
Description lysine acetyltransferase 7
Transcript NM_007067   
Expression
Putative miRNA Targets on KAT7
3'UTR of KAT7
(miRNA target sites are highlighted)		 
>KAT7|NM_007067|3'UTR
   1 AGTGACCTGTCATTCCGAGCCAGCGAACCCCAGCAGTAGGAATCCGTACCCTAGGGATCTGTCTGTCATTTCTCTGTTGC
  81 TCTTGTGATTGGCAAGTACAGTATCCTTTGGGAAGGCCATCCCCCTCAGGACTGTCCTGGCTCCGACCTTTGTGTACACT
 161 GCAGACGCTGGTTCTGAGGAACTGTTGTTTCGGCCTCAGTGAGGTTGCCTGGATGGGATCTGTATTAGACTTGAGTGCAG
 241 GTCTCTCAGCACTGACCCAAGGAGTTCTGTTATGGTACTGTACCTGTCCAGTCACTGGTTCTCTCCTCATGTCCTCTCGC
 321 CCCATGAGGTTGTGTTGTGTCTTCTAAGCGTGGTACTAGTGCTTGCCACCTGGTCACCAGACCTCCAAATATGGCTGCCA
 401 CCACCAGGACCTTTCCAGTTACTCCTTATATGTGTGTTCTATGGAGGGGCAGGGAAAAGGTGGCACTTGTGAGTGTGTGT
 481 GGATTGGCAGGGGGTCCATTCACTTTGGGTTCCATCTTGCTTTAAATTTCTTCATTTTGATTAAGAGACCTCTTTTTGAT
 561 CTGTATTGGGCTAACCAGAGCCAAATACTTTTGAAGAGTTTCCCAGGGACTAGTCATGGTAATAGCATATAATTGATCTG
 641 AATGAGATGGAGAGAAGAATGAAGGGGTGGTGGTTCTGGGTTTGATTTGAGTTCACCTGTGGGCAGTGGGCAGTGGGCAG
 721 TGTCTTGGTGAAAGGGAACGGATACTACTTTTTGCCTCACCGTAAAGTACTCACTAGTAAATATTTCCTTCTCTCTTTAC
 801 TCCCACTTTTTACGTTTGCAGGTGCCAAAGTAATGTCCACTTTTCCCTTTCATGCTGCATATTAACTGGTTAATTATACT
 881 GCAGAAACCTTTTCACCTCCACTAGTCTGATACAGTACATCTGTACTTCCATATACCTTGCACTGATTTTGTCTGAGTGC
 961 CCTGGGAGAAGTAGAAAATGATTGAAAGTGACTTCCGTATCTCAGCCCATGACTCAGCAAGGCAGAATGGCCACCCCTGC
1041 CAAAGTTTGCTTCTCTTTTCAACAGTGCCTCACCCTCCCTCTAGGATTAAAGTGCTTCTGCCCTTCCACGAACTCCTCCT
1121 CCATTTCCTTTTTGGGATTTGTCACCATCCTTCTATTCTCTGGTCTTCTATTTTTGGTGTTGTTCAAGTGAAGGAAGAGA
1201 TGTTCCCTCTAATTTCTCTCTAGCCCATTATAACCTGCTATCTTGGGGCAACTTTTGATGTATGACATGTCACCCTTCCC
1281 AACTTGGTCTCCTCCAACATGCTGTCTTCATGTGGAGCCCTCACCACAATCCCTGACTCCGGTCATTTGTGCCTTTCTCT
1361 TGTCATCTCTGTACACTACTTATATTCACTGTGGGTTGGGGGAGCTAATTTTAAGCATGTTCAGTGGCAGCTCCCCTCCA
1441 GTTTCAGTGTCACTGTTAAAATTTATCAAAAAGCAACTTCACTAGGGGTTTTCTTAAGGGATAAAGGCCTTTTACAGAAG
1521 CTAAACCCTTCCCCACATGTGGTAGAATGTGCTCTTCTATATCTACTCCTCAATAAAGCATGTTCTCTGCTCAAAAAAAA
1601 AAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' aagGUGACGA--UGUUGGAGGGUCu 5'
             :||| :|  | |:::|||||| 
Target 5' aaaTACTTTTGAAGAGTTTCCCAGg 3'
 583 - 607 142.00 -18.50
2 
miRNA  3' aaggUG-AC-GAUGU-UGGAGGGUCu 5'
              || ||  |:|| ::|||:||| 
Target 5' ttagACTTGAGTGCAGGTCTCTCAGc 3'
 225 - 250 135.00 -14.80
3 
miRNA  3' aaGGUGACGAUGUU-GGAGGGUCu 5'
            ||||  | | :| |:|:|||| 
Target 5' tgCCACCACCAGGACCTTTCCAGt 3'
 396 - 419 129.00 -18.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30504741 18 COSMIC
COSN31490063 26 COSMIC
COSN31546254 32 COSMIC
COSN20078959 99 COSMIC
COSN6105462 314 COSMIC
COSN21157087 621 COSMIC
COSN31487908 975 COSMIC
COSN31514873 997 COSMIC
COSN6105463 1005 COSMIC
COSN16992123 1140 COSMIC
COSN31592140 1255 COSMIC
COSN24996688 1450 COSMIC
COSN31487408 1456 COSMIC
COSN23540923 1644 COSMIC
COSN25904697 1843 COSMIC
COSN21579501 1921 COSMIC
COSN7437353 2044 COSMIC
COSN9670115 2257 COSMIC
COSN18966521 2448 COSMIC
COSN25071051 2627 COSMIC
COSN29631889 3128 COSMIC
COSN7437354 3302 COSMIC
COSN1721060 3527 COSMIC
COSN198167 3702 COSMIC
COSN29371124 4123 COSMIC
COSN20702922 4263 COSMIC
COSN25893142 4315 COSMIC
COSN28523864 4446 COSMIC
COSN16160466 4508 COSMIC
COSN25803244 4702 COSMIC
COSN32153725 4909 COSMIC
COSN5179327 5019 COSMIC
COSN1721061 5190 COSMIC
COSN1721062 5499 COSMIC
COSN1721063 5504 COSMIC
COSN1198062 5775 COSMIC
COSN25012315 5937 COSMIC
COSN9670116 6251 COSMIC
COSN25518127 6677 COSMIC
COSN21162522 6739 COSMIC
COSN27941646 6914 COSMIC
COSN1721064 7115 COSMIC
COSN5179328 7221 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs187109773 2 dbSNP
rs1185678748 3 dbSNP
rs1269579059 8 dbSNP
rs750579143 16 dbSNP
rs758612934 17 dbSNP
rs1199543978 18 dbSNP
rs370023916 19 dbSNP
rs1401298905 25 dbSNP
rs755312313 26 dbSNP
rs1189170473 28 dbSNP
rs781613017 29 dbSNP
rs1453560457 30 dbSNP
rs1467431888 31 dbSNP
rs748689670 32 dbSNP
rs1348008256 39 dbSNP
rs1251545607 43 dbSNP
rs1403646227 44 dbSNP
rs756711723 46 dbSNP
rs374545148 47 dbSNP
rs745412621 52 dbSNP
rs146789324 57 dbSNP
rs1221168357 58 dbSNP
rs1003206256 62 dbSNP
rs1052131841 63 dbSNP
rs781187169 64 dbSNP
rs1262077111 73 dbSNP
rs1323863672 75 dbSNP
rs1201363130 100 dbSNP
rs892205278 101 dbSNP
rs1209365914 102 dbSNP
rs1281237405 104 dbSNP
rs1345026955 110 dbSNP
rs763148552 113 dbSNP
rs1227585875 122 dbSNP
rs1325458002 123 dbSNP
rs1193013271 124 dbSNP
rs1397549371 127 dbSNP
rs745643178 133 dbSNP
rs1478813621 140 dbSNP
rs1412891641 141 dbSNP
rs1348008235 145 dbSNP
rs191144457 146 dbSNP
rs549386115 148 dbSNP
rs953303535 149 dbSNP
rs555048519 155 dbSNP
rs539534598 157 dbSNP
rs1475704166 163 dbSNP
rs751495262 163 dbSNP
rs1428826030 167 dbSNP
rs1007400203 168 dbSNP
rs1478508972 169 dbSNP
rs1484312479 171 dbSNP
rs1174099084 176 dbSNP
rs1195872886 186 dbSNP
rs1338250836 191 dbSNP
rs1249203068 192 dbSNP
rs1019239557 193 dbSNP
rs1382600476 198 dbSNP
rs1335193019 200 dbSNP
rs1399900722 204 dbSNP
rs1298673605 208 dbSNP
rs1362402594 214 dbSNP
rs1337428227 215 dbSNP
rs142114632 225 dbSNP
rs976713043 230 dbSNP
rs1394434695 231 dbSNP
rs918616770 234 dbSNP
rs1282141249 238 dbSNP
rs1462189992 244 dbSNP
rs1331311420 247 dbSNP
rs1163191409 253 dbSNP
rs1473816193 258 dbSNP
rs1364869337 261 dbSNP
rs951451067 274 dbSNP
rs1235043569 285 dbSNP
rs1247842935 289 dbSNP
rs1277410696 302 dbSNP
rs1215126368 317 dbSNP
rs984591400 319 dbSNP
rs1216369003 320 dbSNP
rs1352644527 324 dbSNP
rs909982275 333 dbSNP
rs1287324647 345 dbSNP
rs1489581153 348 dbSNP
rs35458240 349 dbSNP
rs948187669 350 dbSNP
rs182659062 351 dbSNP
rs1268349195 352 dbSNP
rs1394025606 357 dbSNP
rs1452402245 358 dbSNP
rs1201189283 359 dbSNP
rs1362296614 367 dbSNP
rs1386143356 369 dbSNP
rs928192113 375 dbSNP
rs1469394455 384 dbSNP
rs1159067425 387 dbSNP
rs1194926867 389 dbSNP
rs1454385819 390 dbSNP
rs145845633 394 dbSNP
rs1211451787 396 dbSNP
rs1448445363 396 dbSNP
rs1052082449 408 dbSNP
rs537627221 411 dbSNP
rs892113546 417 dbSNP
rs946414999 419 dbSNP
rs1235100940 420 dbSNP
rs187741276 425 dbSNP
rs1390737045 426 dbSNP
rs577609388 427 dbSNP
rs1433193664 431 dbSNP
rs1388018885 437 dbSNP
rs1327343541 440 dbSNP
rs546560454 442 dbSNP
rs1377791676 457 dbSNP
rs1174881543 471 dbSNP
rs1434733574 485 dbSNP
rs1007804112 486 dbSNP
rs193110946 509 dbSNP
rs552657452 511 dbSNP
rs776371295 513 dbSNP
rs1476200719 526 dbSNP
rs572802312 527 dbSNP
rs1239841316 544 dbSNP
rs1192199335 550 dbSNP
rs1310516869 554 dbSNP
rs901755154 562 dbSNP
rs1211515138 566 dbSNP
rs993401693 567 dbSNP
rs1356455208 568 dbSNP
rs1026209321 574 dbSNP
rs1244510701 589 dbSNP
rs1340278974 592 dbSNP
rs1269897638 595 dbSNP
rs60606425 606 dbSNP
rs55798908 609 dbSNP
rs1357773040 629 dbSNP
rs1313948205 630 dbSNP
rs1488815093 648 dbSNP
rs984148801 656 dbSNP
rs1017430010 667 dbSNP
rs969532192 688 dbSNP
rs1206927898 695 dbSNP
rs769772058 696 dbSNP
rs928139475 697 dbSNP
rs561838809 698 dbSNP
rs1166981265 699 dbSNP
rs1259393212 699 dbSNP
rs939517994 699 dbSNP
rs867969296 704 dbSNP
rs988362917 705 dbSNP
rs530551891 707 dbSNP
rs914163742 708 dbSNP
rs946335520 710 dbSNP
rs1272489278 713 dbSNP
rs543978954 718 dbSNP
rs1337351730 740 dbSNP
rs1239849767 741 dbSNP
rs888855679 743 dbSNP
rs1442548585 751 dbSNP
rs1354112131 756 dbSNP
rs1300483065 762 dbSNP
rs1443675591 763 dbSNP
rs1354622030 768 dbSNP
rs1327721116 773 dbSNP
rs1162783617 775 dbSNP
rs572982202 776 dbSNP
rs1463755630 777 dbSNP
rs943162000 781 dbSNP
rs563983955 782 dbSNP
rs1040165525 789 dbSNP
rs1474795403 794 dbSNP
rs1411514464 801 dbSNP
rs1458955945 806 dbSNP
rs1480961995 814 dbSNP
rs1232401859 815 dbSNP
rs761978465 834 dbSNP
rs533047263 835 dbSNP
rs1196925596 836 dbSNP
rs1165695029 842 dbSNP
rs1395296817 844 dbSNP
rs901663387 855 dbSNP
rs993306775 856 dbSNP
rs1309708557 860 dbSNP
rs1447145652 871 dbSNP
rs1373366731 878 dbSNP
rs1278423584 880 dbSNP
rs1443989397 890 dbSNP
rs772009658 899 dbSNP
rs1379491347 902 dbSNP
rs1460673378 912 dbSNP
rs1450931679 917 dbSNP
rs1347906141 919 dbSNP
rs1161148063 920 dbSNP
rs1419619715 922 dbSNP
rs376826882 930 dbSNP
rs759501691 932 dbSNP
rs546881442 937 dbSNP
rs1247055822 950 dbSNP
rs1455684197 954 dbSNP
rs1249747214 957 dbSNP
rs1253804378 960 dbSNP
rs1213307875 964 dbSNP
rs1487688955 991 dbSNP
rs887706227 993 dbSNP
rs1217017185 995 dbSNP
rs1005955348 997 dbSNP
rs1016962233 998 dbSNP
rs1237306458 1000 dbSNP
rs1199431837 1011 dbSNP
rs796398807 1012 dbSNP
rs61305662 1018 dbSNP
rs1459771590 1019 dbSNP
rs1439746243 1023 dbSNP
rs980827603 1031 dbSNP
rs1256730159 1037 dbSNP
rs1035114958 1054 dbSNP
rs1344526071 1058 dbSNP
rs1156794613 1059 dbSNP
rs1436589462 1064 dbSNP
rs1395807041 1065 dbSNP
rs1193193567 1070 dbSNP
rs1431633719 1072 dbSNP
rs1425540679 1073 dbSNP
rs773249607 1074 dbSNP
rs988310519 1085 dbSNP
rs1465697408 1093 dbSNP
rs1349365431 1102 dbSNP
rs1280447294 1105 dbSNP
rs1231946841 1107 dbSNP
rs914155495 1110 dbSNP
rs565886660 1111 dbSNP
rs538116065 1113 dbSNP
rs528507695 1115 dbSNP
rs548328669 1116 dbSNP
rs1416573859 1117 dbSNP
rs968363905 1119 dbSNP
rs1173052569 1123 dbSNP
rs376889586 1129 dbSNP
rs1464668215 1135 dbSNP
rs1374992112 1137 dbSNP
rs979495808 1142 dbSNP
rs1294066170 1152 dbSNP
rs1428219517 1156 dbSNP
rs1190636655 1159 dbSNP
rs1339860369 1163 dbSNP
rs1486269892 1167 dbSNP
rs568521072 1168 dbSNP
rs910242837 1169 dbSNP
rs1260188561 1181 dbSNP
rs1321720535 1189 dbSNP
rs1252636235 1193 dbSNP
rs1227752101 1195 dbSNP
rs1317024411 1205 dbSNP
rs1209134670 1215 dbSNP
rs1234950520 1219 dbSNP
rs1356006022 1225 dbSNP
rs1256431338 1228 dbSNP
rs16963127 1235 dbSNP
rs1394307446 1244 dbSNP
rs1040073207 1249 dbSNP
rs1262404817 1253 dbSNP
rs1461691311 1257 dbSNP
rs1167506218 1262 dbSNP
rs1477834170 1265 dbSNP
rs923034906 1270 dbSNP
rs1426734693 1271 dbSNP
rs1432293918 1273 dbSNP
rs929105225 1275 dbSNP
rs1047586100 1276 dbSNP
rs557579297 1283 dbSNP
rs1360043714 1286 dbSNP
rs1457016216 1287 dbSNP
rs1006159367 1288 dbSNP
rs56017497 1289 dbSNP
rs1044722640 1290 dbSNP
rs1215320185 1291 dbSNP
rs905163147 1295 dbSNP
rs1283457341 1296 dbSNP
rs1360479914 1297 dbSNP
rs1400655846 1300 dbSNP
rs1002211393 1313 dbSNP
rs1035063921 1314 dbSNP
rs1398367516 1315 dbSNP
rs185514093 1317 dbSNP
rs1009731137 1321 dbSNP
rs1021151660 1324 dbSNP
rs1161928557 1333 dbSNP
rs1455788406 1334 dbSNP
rs764362296 1341 dbSNP
rs968687524 1363 dbSNP
rs1438603334 1366 dbSNP
rs1302255816 1368 dbSNP
rs540094243 1379 dbSNP
rs759356836 1382 dbSNP
rs1195117209 1384 dbSNP
rs1468717956 1420 dbSNP
rs553653457 1431 dbSNP
rs910810603 1433 dbSNP
rs1261305045 1439 dbSNP
rs572718341 1449 dbSNP
rs964377676 1454 dbSNP
rs975726268 1466 dbSNP
rs766574821 1471 dbSNP
rs1330795386 1478 dbSNP
rs1321958549 1482 dbSNP
rs1402875724 1487 dbSNP
rs1386298199 1489 dbSNP
rs1218140843 1498 dbSNP
rs757339081 1499 dbSNP
rs1377979400 1501 dbSNP
rs1487875269 1503 dbSNP
rs1175073719 1509 dbSNP
rs755489186 1522 dbSNP
rs1426854501 1523 dbSNP
rs1435232985 1527 dbSNP
rs1454429182 1529 dbSNP
rs1245810411 1530 dbSNP
rs1196471681 1531 dbSNP
rs370727808 1534 dbSNP
rs1448574700 1535 dbSNP
rs1157267887 1538 dbSNP
rs1380199483 1542 dbSNP
rs1262268988 1558 dbSNP
rs1215811199 1560 dbSNP
rs1351540504 1564 dbSNP
rs1047533721 1566 dbSNP
rs541792206 1566 dbSNP
rs909021014 1569 dbSNP
rs1273358981 1582 dbSNP
rs1433259555 1598 dbSNP
rs555094683 1600 dbSNP
rs941869439 1601 dbSNP
rs1031196768 1604 dbSNP
rs574989713 1611 dbSNP
rs187535172 1612 dbSNP
rs905777312 1618 dbSNP
rs1370043536 1628 dbSNP
rs1002201517 1634 dbSNP
rs1056513937 1638 dbSNP
rs1010993399 1639 dbSNP
rs896560194 1643 dbSNP
rs1009680554 1653 dbSNP
rs1373460927 1653 dbSNP
rs1487250685 1656 dbSNP
rs1022420322 1660 dbSNP
rs1211675240 1665 dbSNP
rs1441935328 1667 dbSNP
rs1276688334 1668 dbSNP
rs1477917612 1674 dbSNP
rs1340433560 1676 dbSNP
rs1021476380 1678 dbSNP
rs968413912 1703 dbSNP
rs1217224712 1713 dbSNP
rs1354320122 1721 dbSNP
rs1242147130 1724 dbSNP
rs968217862 1734 dbSNP
rs768082728 1742 dbSNP
rs1001450169 1744 dbSNP
rs1448049718 1744 dbSNP
rs1017818370 1745 dbSNP
rs985238687 1751 dbSNP
rs1400630025 1755 dbSNP
rs964972566 1761 dbSNP
rs1476752216 1762 dbSNP
rs1419874145 1763 dbSNP
rs752337413 1764 dbSNP
rs1472487597 1768 dbSNP
rs1018468295 1787 dbSNP
rs1438575212 1792 dbSNP
rs965054863 1792 dbSNP
rs1257736398 1801 dbSNP
rs1197122871 1804 dbSNP
rs538031444 1805 dbSNP
rs1294370640 1811 dbSNP
rs1228282959 1815 dbSNP
rs976862665 1817 dbSNP
rs950403996 1818 dbSNP
rs1443829676 1820 dbSNP
rs563897332 1828 dbSNP
rs754269613 1833 dbSNP
rs1377168384 1839 dbSNP
rs374081123 1843 dbSNP
rs918500192 1844 dbSNP
rs1396454831 1848 dbSNP
rs929886803 1850 dbSNP
rs908961830 1858 dbSNP
rs1404672762 1860 dbSNP
rs1411583074 1870 dbSNP
rs1238026227 1873 dbSNP
rs983916621 1873 dbSNP
rs1440456381 1886 dbSNP
rs909736284 1887 dbSNP
rs980381736 1888 dbSNP
rs1470073901 1892 dbSNP
rs927225049 1895 dbSNP
rs948107813 1908 dbSNP
rs1221348774 1910 dbSNP
rs192066774 1913 dbSNP
rs759755125 1916 dbSNP
rs1045143990 1917 dbSNP
rs150289240 1929 dbSNP
rs753104578 1931 dbSNP
rs1052392534 1932 dbSNP
rs896465614 1938 dbSNP
rs1377005289 1954 dbSNP
rs529203323 1955 dbSNP
rs1308031614 1964 dbSNP
rs1404798385 1965 dbSNP
rs755695212 1970 dbSNP
rs1165622638 1971 dbSNP
rs1293862963 1973 dbSNP
rs1435576565 1976 dbSNP
rs548561452 1980 dbSNP
rs1161213035 1983 dbSNP
rs892678758 1989 dbSNP
rs1379796849 1991 dbSNP
rs562105658 1995 dbSNP
rs1377287669 1999 dbSNP
rs1042442254 2014 dbSNP
rs1268404477 2014 dbSNP
rs1011130498 2017 dbSNP
rs1487718291 2018 dbSNP
rs530986963 2025 dbSNP
rs753295610 2026 dbSNP
rs1244270775 2028 dbSNP
rs1172065762 2033 dbSNP
rs1218031511 2036 dbSNP
rs1022389606 2041 dbSNP
rs1284662286 2042 dbSNP
rs867169987 2043 dbSNP
rs1291473098 2058 dbSNP
rs138950540 2060 dbSNP
rs900742791 2060 dbSNP
rs997697487 2078 dbSNP
rs1030553059 2081 dbSNP
rs1018021011 2084 dbSNP
rs1290516226 2084 dbSNP
rs950351904 2085 dbSNP
rs965537250 2091 dbSNP
rs1359876051 2093 dbSNP
rs983525018 2102 dbSNP
rs1378365767 2103 dbSNP
rs577710797 2110 dbSNP
rs1431767468 2111 dbSNP
rs1422127879 2117 dbSNP
rs1197547795 2120 dbSNP
rs1194911629 2127 dbSNP
rs1025317434 2132 dbSNP
rs571032582 2133 dbSNP
rs1213805843 2155 dbSNP
rs1483952089 2157 dbSNP
rs1256150984 2159 dbSNP
rs1232116290 2161 dbSNP
rs1310168781 2162 dbSNP
rs984052095 2163 dbSNP
rs540056802 2171 dbSNP
rs1236199145 2172 dbSNP
rs1276244298 2181 dbSNP
rs1416626393 2182 dbSNP
rs1403042435 2193 dbSNP
rs938514458 2196 dbSNP
rs1464716959 2213 dbSNP
rs969232400 2215 dbSNP
rs1472787163 2218 dbSNP
rs992715926 2220 dbSNP
rs981055476 2232 dbSNP
rs928034542 2233 dbSNP
rs1415965932 2236 dbSNP
rs1422031186 2238 dbSNP
rs1464143179 2249 dbSNP
rs1190698993 2250 dbSNP
rs546914520 2251 dbSNP
rs1170176399 2255 dbSNP
rs939432221 2257 dbSNP
rs1256270530 2268 dbSNP
rs1466958787 2270 dbSNP
rs1052360512 2271 dbSNP
rs544223700 2287 dbSNP
rs913916195 2290 dbSNP
rs1331998797 2296 dbSNP
rs1482052642 2297 dbSNP
rs946746999 2303 dbSNP
rs1198981352 2306 dbSNP
rs1043938074 2308 dbSNP
rs903931354 2309 dbSNP
rs889405241 2314 dbSNP
rs1007718095 2315 dbSNP
rs936772484 2316 dbSNP
rs149428964 2318 dbSNP
rs900881179 2320 dbSNP
rs1217510519 2324 dbSNP
rs1278397235 2326 dbSNP
rs1319607382 2330 dbSNP
rs1039134570 2332 dbSNP
rs1332310619 2332 dbSNP
rs1398592639 2341 dbSNP
rs1200887790 2347 dbSNP
rs535818062 2353 dbSNP
rs1167669089 2354 dbSNP
rs1458846017 2358 dbSNP
rs1368435353 2363 dbSNP
rs900649348 2368 dbSNP
rs751097167 2372 dbSNP
rs1030500776 2373 dbSNP
rs1277021933 2374 dbSNP
rs997954960 2381 dbSNP
rs1025287184 2383 dbSNP
rs1236115760 2384 dbSNP
rs1355947151 2384 dbSNP
rs544682665 2384 dbSNP
rs61436973 2384 dbSNP
rs1442347913 2385 dbSNP
rs1211367737 2397 dbSNP
rs1307972004 2398 dbSNP
rs1476858681 2399 dbSNP
rs1193091153 2405 dbSNP
rs1424574235 2407 dbSNP
rs555330283 2408 dbSNP
rs1387774553 2414 dbSNP
rs1390574207 2416 dbSNP
rs1478956378 2422 dbSNP
rs951016153 2423 dbSNP
rs1455899297 2424 dbSNP
rs1005247943 2425 dbSNP
rs1438665947 2428 dbSNP
rs886730078 2440 dbSNP
rs1004544279 2445 dbSNP
rs1016371740 2454 dbSNP
rs1266502255 2455 dbSNP
rs1016851448 2461 dbSNP
rs562702528 2469 dbSNP
rs1286797683 2471 dbSNP
rs963141983 2472 dbSNP
rs1351775442 2475 dbSNP
rs1414840407 2491 dbSNP
rs1001669116 2494 dbSNP
rs1330921872 2495 dbSNP
rs1034114182 2498 dbSNP
rs980589009 2501 dbSNP
rs1336041821 2502 dbSNP
rs574900790 2505 dbSNP
rs1298275187 2508 dbSNP
rs1418628286 2517 dbSNP
rs9898183 2520 dbSNP
rs960800459 2536 dbSNP
rs1398816274 2537 dbSNP
rs1478207933 2540 dbSNP
rs1298331528 2544 dbSNP
rs1341976229 2557 dbSNP
rs1376874958 2565 dbSNP
rs1196539119 2569 dbSNP
rs551171969 2573 dbSNP
rs374483581 2574 dbSNP
rs1487352726 2578 dbSNP
rs914017789 2579 dbSNP
rs557451509 2589 dbSNP
rs1344641174 2590 dbSNP
rs1273415742 2592 dbSNP
rs577381806 2596 dbSNP
rs184085417 2597 dbSNP
rs1398772314 2599 dbSNP
rs560137086 2603 dbSNP
rs978107490 2611 dbSNP
rs573870792 2619 dbSNP
rs1487620105 2620 dbSNP
rs1173981114 2624 dbSNP
rs1478713829 2636 dbSNP
rs925249554 2638 dbSNP
rs1239266075 2642 dbSNP
rs1476853856 2642 dbSNP
rs936696657 2643 dbSNP
rs1215965032 2647 dbSNP
rs368852025 2652 dbSNP
rs1264075642 2655 dbSNP
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rs750509539 5729 dbSNP
rs371498007 5734 dbSNP
rs1206847532 5744 dbSNP
rs1024107602 5749 dbSNP
rs1329140891 5750 dbSNP
rs971431200 5752 dbSNP
rs911316239 5759 dbSNP
rs1233397629 5762 dbSNP
rs1365830422 5763 dbSNP
rs944196522 5766 dbSNP
rs976986631 5768 dbSNP
rs533911529 5769 dbSNP
rs1319160464 5770 dbSNP
rs1471272164 5775 dbSNP
rs1031785921 5783 dbSNP
rs567287876 5789 dbSNP
rs866179379 5794 dbSNP
rs745951793 5810 dbSNP
rs1176226097 5814 dbSNP
rs1422622470 5821 dbSNP
rs1190224901 5826 dbSNP
rs1449871868 5842 dbSNP
rs1247236706 5851 dbSNP
rs957594490 5862 dbSNP
rs1186560308 5866 dbSNP
rs1484234211 5868 dbSNP
rs1259760961 5869 dbSNP
rs1310596168 5872 dbSNP
rs1277080690 5875 dbSNP
rs1229540495 5884 dbSNP
rs1486025626 5889 dbSNP
rs532348386 5894 dbSNP
rs1187470091 5907 dbSNP
rs930271113 5912 dbSNP
rs1455036798 5915 dbSNP
rs1452984856 5923 dbSNP
rs990205413 5926 dbSNP
rs148837773 5930 dbSNP
rs1446686636 5933 dbSNP
rs1048689863 5937 dbSNP
rs1396248943 5938 dbSNP
rs1170071576 5943 dbSNP
rs954284749 5944 dbSNP
rs888089099 5945 dbSNP
rs1436634760 5951 dbSNP
rs1157081748 5952 dbSNP
rs947702212 5953 dbSNP
rs1344825741 5954 dbSNP
rs1454440347 5956 dbSNP
rs1425428167 5959 dbSNP
rs556168987 5966 dbSNP
rs1256784875 5974 dbSNP
rs1181313857 5975 dbSNP
rs1482332882 5975 dbSNP
rs763097149 5975 dbSNP
rs906314546 5977 dbSNP
rs1003782161 5982 dbSNP
rs769909445 5985 dbSNP
rs1272856676 5987 dbSNP
rs1247444068 5990 dbSNP
rs1322802751 5994 dbSNP
rs986937522 6003 dbSNP
rs1312661786 6006 dbSNP
rs1227154662 6007 dbSNP
rs1376304314 6015 dbSNP
rs79510689 6019 dbSNP
rs539165930 6021 dbSNP
rs1410043599 6022 dbSNP
rs573605888 6025 dbSNP
rs547133058 6026 dbSNP
rs1010801160 6027 dbSNP
rs1459279578 6029 dbSNP
rs770969240 6029 dbSNP
rs558841396 6044 dbSNP
rs1368938174 6049 dbSNP
rs1163967688 6051 dbSNP
rs1237312514 6057 dbSNP
rs1022172206 6060 dbSNP
rs968657289 6061 dbSNP
rs1006881161 6078 dbSNP
rs1249924164 6080 dbSNP
rs1036099993 6089 dbSNP
rs1217425723 6090 dbSNP
rs572600600 6091 dbSNP
rs541333740 6096 dbSNP
rs1213509796 6098 dbSNP
rs1331914651 6102 dbSNP
rs1048730032 6110 dbSNP
rs1289619319 6112 dbSNP
rs1254158913 6119 dbSNP
rs183118250 6127 dbSNP
rs1012806712 6130 dbSNP
rs1045648146 6132 dbSNP
rs1349452192 6132 dbSNP
rs907032647 6133 dbSNP
rs1391149246 6138 dbSNP
rs998680063 6141 dbSNP
rs575244058 6144 dbSNP
rs1407273704 6145 dbSNP
rs1456273434 6156 dbSNP
rs1390749809 6159 dbSNP
rs910141713 6159 dbSNP
rs1032170924 6165 dbSNP
rs1409911468 6166 dbSNP
rs1201239867 6167 dbSNP
rs544201541 6174 dbSNP
rs1460710403 6177 dbSNP
rs1267090665 6185 dbSNP
rs927692257 6192 dbSNP
rs939088987 6195 dbSNP
rs762462329 6202 dbSNP
rs1269355613 6203 dbSNP
rs892262018 6212 dbSNP
rs563319284 6219 dbSNP
rs1048488565 6221 dbSNP
rs187613113 6222 dbSNP
rs1331389764 6227 dbSNP
rs1444400605 6229 dbSNP
rs772623025 6230 dbSNP
rs1438477909 6233 dbSNP
rs1018258950 6237 dbSNP
rs1321112072 6241 dbSNP
rs1456676607 6252 dbSNP
rs1028337068 6259 dbSNP
rs1382874781 6270 dbSNP
rs1297556207 6281 dbSNP
rs965772788 6282 dbSNP
rs954253521 6287 dbSNP
rs1026151531 6300 dbSNP
rs1451743556 6306 dbSNP
rs1249089376 6313 dbSNP
rs1188454816 6314 dbSNP
rs545887763 6316 dbSNP
rs987030116 6322 dbSNP
rs1281512586 6323 dbSNP
rs984320824 6324 dbSNP
rs1274124190 6326 dbSNP
rs1470117354 6328 dbSNP
rs772664820 6342 dbSNP
rs1231682479 6350 dbSNP
rs1298149990 6352 dbSNP
rs746707182 6357 dbSNP
rs1202977114 6364 dbSNP
rs143467652 6374 dbSNP
rs961528165 6375 dbSNP
rs528306348 6388 dbSNP
rs969650037 6392 dbSNP
rs1401708070 6404 dbSNP
rs1179075471 6409 dbSNP
rs981035388 6423 dbSNP
rs972963633 6427 dbSNP
rs1391166859 6447 dbSNP
rs1168417117 6449 dbSNP
rs918969529 6454 dbSNP
rs939018748 6455 dbSNP
rs930424755 6459 dbSNP
rs1415940475 6463 dbSNP
rs1442471749 6468 dbSNP
rs1475043085 6471 dbSNP
rs1208272396 6472 dbSNP
rs1165934666 6473 dbSNP
rs1419691215 6477 dbSNP
rs1444296812 6478 dbSNP
rs548120388 6480 dbSNP
rs562601661 6484 dbSNP
rs948419323 6485 dbSNP
rs1339916033 6491 dbSNP
rs1311213976 6501 dbSNP
rs753441554 6506 dbSNP
rs1045617167 6512 dbSNP
rs1408591384 6517 dbSNP
rs1416470732 6518 dbSNP
rs907168706 6526 dbSNP
rs998606093 6527 dbSNP
rs1472796178 6531 dbSNP
rs1052964128 6537 dbSNP
rs1185178152 6539 dbSNP
rs1473329891 6544 dbSNP
rs1443720514 6546 dbSNP
rs1252130390 6550 dbSNP
rs893181314 6554 dbSNP
rs1204120005 6556 dbSNP
rs759155535 6565 dbSNP
rs1435845633 6588 dbSNP
rs1310613022 6590 dbSNP
rs1011680162 6598 dbSNP
rs765064207 6599 dbSNP
rs1210358015 6600 dbSNP
rs1355629221 6604 dbSNP
rs530762501 6613 dbSNP
rs1230312601 6621 dbSNP
rs889776163 6629 dbSNP
rs1287935828 6631 dbSNP
rs1440340355 6633 dbSNP
rs577532165 6645 dbSNP
rs1019873511 6646 dbSNP
rs368221918 6648 dbSNP
rs113835482 6657 dbSNP
rs973284942 6658 dbSNP
rs538708022 6665 dbSNP
rs1162123076 6670 dbSNP
rs1272897363 6670 dbSNP
rs746989326 6677 dbSNP
rs777695972 6678 dbSNP
rs1412129397 6690 dbSNP
rs1027175316 6695 dbSNP
rs953017662 6696 dbSNP
rs1248231372 6707 dbSNP
rs1199325070 6709 dbSNP
rs191022706 6710 dbSNP
rs915696450 6715 dbSNP
rs1210565779 6716 dbSNP
rs948388858 6719 dbSNP
rs1329895134 6725 dbSNP
rs1222266806 6728 dbSNP
rs566104312 6728 dbSNP
rs1370013783 6729 dbSNP
rs535202797 6731 dbSNP
rs928520106 6732 dbSNP
rs1275743196 6733 dbSNP
rs555228569 6738 dbSNP
rs1369362595 6742 dbSNP
rs1323113636 6751 dbSNP
rs1458267682 6760 dbSNP
rs1388727607 6763 dbSNP
rs750479624 6766 dbSNP
rs1053339303 6769 dbSNP
rs1185771297 6771 dbSNP
rs1172909612 6783 dbSNP
rs892951827 6785 dbSNP
rs575206346 6791 dbSNP
rs946498004 6792 dbSNP
rs1049826861 6795 dbSNP
rs1190424365 6797 dbSNP
rs1465332557 6798 dbSNP
rs889913084 6803 dbSNP
rs979163971 6804 dbSNP
rs1008190902 6807 dbSNP
rs140631091 6817 dbSNP
rs1314122342 6822 dbSNP
rs1279628542 6828 dbSNP
rs369635222 6836 dbSNP
rs943208805 6837 dbSNP
rs897389778 6844 dbSNP
rs994414443 6846 dbSNP
rs1027680682 6847 dbSNP
rs1314299088 6857 dbSNP
rs901790498 6858 dbSNP
rs145883586 6870 dbSNP
rs1393021597 6871 dbSNP
rs1170263942 6873 dbSNP
rs1449929270 6883 dbSNP
rs1418750961 6886 dbSNP
rs556955230 6888 dbSNP
rs1022630906 6895 dbSNP
rs1231187214 6896 dbSNP
rs1210435257 6897 dbSNP
rs538962838 6897 dbSNP
rs576795160 6901 dbSNP
rs1229610897 6903 dbSNP
rs981044423 6903 dbSNP
rs905329732 6904 dbSNP
rs1002821406 6907 dbSNP
rs1035276427 6910 dbSNP
rs1211743820 6912 dbSNP
rs1380697386 6914 dbSNP
rs1302977243 6925 dbSNP
rs1311081090 6926 dbSNP
rs756167171 6930 dbSNP
rs544778889 6931 dbSNP
rs934343410 6933 dbSNP
rs1020549790 6935 dbSNP
rs988730038 6937 dbSNP
rs1425555669 6942 dbSNP
rs769624730 6943 dbSNP
rs1476282457 6944 dbSNP
rs914506727 6945 dbSNP
rs780172534 6948 dbSNP
rs947236637 6949 dbSNP
rs1049590181 6951 dbSNP
rs979110110 6956 dbSNP
rs889847713 6957 dbSNP
rs775458103 6963 dbSNP
rs1175038107 6964 dbSNP
rs1382321979 6968 dbSNP
rs1232183023 6973 dbSNP
rs115037934 6974 dbSNP
rs559945380 6975 dbSNP
rs1346111530 6976 dbSNP
rs1437770249 6977 dbSNP
rs749564530 6979 dbSNP
rs1370978867 6980 dbSNP
rs768981005 6984 dbSNP
rs1041176228 6992 dbSNP
rs897148883 6994 dbSNP
rs1350406284 6995 dbSNP
rs923192332 6996 dbSNP
rs1459965378 7003 dbSNP
rs142981570 7008 dbSNP
rs527762967 7012 dbSNP
rs1047660142 7024 dbSNP
rs1348616059 7026 dbSNP
rs1248784616 7032 dbSNP
rs1048638409 7033 dbSNP
rs887070130 7034 dbSNP
rs888698690 7037 dbSNP
rs941352370 7039 dbSNP
rs1212421183 7043 dbSNP
rs779482829 7046 dbSNP
rs1012383724 7047 dbSNP
rs1204827269 7047 dbSNP
rs73987388 7052 dbSNP
rs969755115 7053 dbSNP
rs1002558972 7057 dbSNP
rs1035431870 7059 dbSNP
rs748519003 7062 dbSNP
rs1325117027 7066 dbSNP
rs1252312708 7067 dbSNP
rs988920654 7068 dbSNP
rs896665640 7070 dbSNP
rs1010209887 7072 dbSNP
rs1021164890 7076 dbSNP
rs1453239368 7093 dbSNP
rs1362310610 7094 dbSNP
rs1195418640 7100 dbSNP
rs1434098412 7101 dbSNP
rs967653836 7105 dbSNP
rs1192304063 7106 dbSNP
rs541623189 7107 dbSNP
rs1158824477 7114 dbSNP
rs138815874 7121 dbSNP
rs773711947 7125 dbSNP
rs1409648773 7128 dbSNP
rs1349457019 7129 dbSNP
rs1459172995 7140 dbSNP
rs1017303706 7142 dbSNP
rs149374132 7153 dbSNP
rs943883938 7156 dbSNP
rs1438546477 7161 dbSNP
rs144703034 7162 dbSNP
rs1041145580 7165 dbSNP
rs768621089 7166 dbSNP
rs918705821 7167 dbSNP
rs929955027 7168 dbSNP
rs114149516 7169 dbSNP
rs1394844777 7174 dbSNP
rs183432343 7175 dbSNP
rs1451809283 7186 dbSNP
rs1012471222 7188 dbSNP
rs1391362239 7204 dbSNP
rs1238372359 7210 dbSNP
rs1193217831 7223 dbSNP
rs1045313590 7224 dbSNP
rs1280383924 7224 dbSNP
rs906697045 7228 dbSNP
rs1003698375 7238 dbSNP
rs1259109843 7239 dbSNP
rs1035397771 7241 dbSNP
rs759455245 7243 dbSNP
rs1231229133 7257 dbSNP
rs1272388662 7258 dbSNP
rs1231839338 7267 dbSNP
rs1344177761 7271 dbSNP
rs1270665541 7274 dbSNP
rs148501540 7276 dbSNP
rs529626004 7279 dbSNP
rs1324749106 7280 dbSNP
rs1211614033 7291 dbSNP
rs1415555671 7300 dbSNP
rs145315151 7307 dbSNP
rs926681843 7308 dbSNP
rs1436751244 7310 dbSNP
rs534851053 7311 dbSNP
rs1021729696 7313 dbSNP
rs1234265251 7326 dbSNP
rs968439528 7330 dbSNP
rs1474744147 7333 dbSNP
rs1370781215 7339 dbSNP
rs1189038696 7341 dbSNP
rs1474062100 7342 dbSNP
rs1475304753 7343 dbSNP
rs896607327 7346 dbSNP
rs1208333606 7353 dbSNP
rs1483901754 7354 dbSNP
rs1273520021 7357 dbSNP
rs1009744800 7362 dbSNP
rs985364045 7363 dbSNP
rs1267238871 7365 dbSNP
rs555191860 7367 dbSNP
rs911178159 7372 dbSNP
rs1417661288 7376 dbSNP
rs1462266920 7377 dbSNP
rs965205580 7379 dbSNP
rs548200185 7380 dbSNP
rs1411955973 7382 dbSNP
rs762192068 7386 dbSNP
rs904151985 7387 dbSNP
rs1408658182 7389 dbSNP
rs1393549036 7392 dbSNP
rs147222909 7393 dbSNP
rs767765051 7395 dbSNP
rs1416592955 7397 dbSNP
rs1185330972 7398 dbSNP
rs964420519 7404 dbSNP
rs909854564 7406 dbSNP
rs1180837343 7407 dbSNP
rs1030091397 7408 dbSNP
rs948084762 7419 dbSNP
rs376718659 7420 dbSNP
rs1413228701 7427 dbSNP
rs1292878878 7434 dbSNP
rs950600676 7436 dbSNP
rs868461216 7437 dbSNP
rs1045282163 7449 dbSNP
rs1246659529 7460 dbSNP
rs370029805 7462 dbSNP
rs939480677 7463 dbSNP
rs1279290240 7464 dbSNP
rs1053039402 7468 dbSNP
rs909111313 7469 dbSNP
rs537713371 7471 dbSNP
rs1196306375 7486 dbSNP
rs1327139619 7491 dbSNP
rs963319635 7501 dbSNP
rs1162177831 7502 dbSNP
rs1393090774 7502 dbSNP
rs28447441 7510 dbSNP
rs1276230167 7515 dbSNP
rs891514455 7516 dbSNP
rs561331004 7520 dbSNP
rs1484392932 7525 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293/HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1067870. RNA binding protein: AGO2. Condition:Ago2 IP-seq (mitotic cells) ...

- Kishore S; Gruber AR; Jedlinski DJ; Syed et al., 2013, Genome biology.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' aaGGUGACGAUGUUGGAGGgucu 5'
            :||:||   |||||||:    
Target 5' gcUCAUUG---CAACCUCUgccu 3'
 		2 - 21
Article - Kishore S; Gruber AR; Jedlinski DJ; Syed et al.
- Genome biology, 2013
BACKGROUND: In recent years, a variety of small RNAs derived from other RNAs with well-known functions such as tRNAs and snoRNAs, have been identified. The functional relevance of these RNAs is largely unknown. To gain insight into the complexity of snoRNA processing and the functional relevance of snoRNA-derived small RNAs, we sequence long and short RNAs, small RNAs that co-precipitate with the Argonaute 2 protein and RNA fragments obtained in photoreactive nucleotide-enhanced crosslinking and immunoprecipitation (PAR-CLIP) of core snoRNA-associated proteins. RESULTS: Analysis of these data sets reveals that many loci in the human genome reproducibly give rise to C/D box-like snoRNAs, whose expression and evolutionary conservation are typically less pronounced relative to the snoRNAs that are currently cataloged. We further find that virtually all C/D box snoRNAs are specifically processed inside the regions of terminal complementarity, retaining in the mature form only 4-5 nucleotides upstream of the C box and 2-5 nucleotides downstream of the D box. Sequencing of the total and Argonaute 2-associated populations of small RNAs reveals that despite their cellular abundance, C/D box-derived small RNAs are not efficiently incorporated into the Ago2 protein. CONCLUSIONS: We conclude that the human genome encodes a large number of snoRNAs that are processed along the canonical pathway and expressed at relatively low levels. Generation of snoRNA-derived processing products with alternative, particularly miRNA-like, functions appears to be uncommon.
LinkOut: [PMID: 23706177]
CLIP-seq Support 1 for dataset GSM1067870
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293/HeLa / Ago2 IP-seq (mitotic cells)
Location of target site ENST00000259021.4 | 3UTR | GGCUCAUUGCAACCUCUGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23706177 / GSE43666
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.968 0.08 -1.000 0.5 3 Click to see details
HNSC -0.968 0.08 -1.000 0.5 3 Click to see details
HNSC -0.968 0.08 -1.000 0.5 3 Click to see details
HNSC -0.968 0.08 -1.000 0.5 3 Click to see details
HNSC -0.968 0.08 -1.000 0.5 3 Click to see details
HNSC -0.968 0.08 -1.000 0.5 3 Click to see details
HNSC -0.968 0.08 -1.000 0.5 3 Click to see details
HNSC -0.968 0.08 -1.000 0.5 3 Click to see details
HNSC -0.968 0.08 -1.000 0.5 3 Click to see details
167 hsa-miR-3192-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058548 CTTNBP2NL CTTNBP2 N-terminal like 2 2
MIRT139892 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT207395 MAT2A methionine adenosyltransferase 2A 2 6
MIRT294640 ZNF548 zinc finger protein 548 2 2
MIRT324251 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT441475 BEST3 bestrophin 3 2 2
MIRT445233 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT446763 ZNF491 zinc finger protein 491 2 2
MIRT451003 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 2
MIRT452436 QDPR quinoid dihydropteridine reductase 2 2
MIRT452582 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452950 DISC1 disrupted in schizophrenia 1 2 2
MIRT453309 ZNF394 zinc finger protein 394 2 2
MIRT453810 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT454101 TMEM209 transmembrane protein 209 2 2
MIRT456228 LIX1L limb and CNS expressed 1 like 2 4
MIRT456738 TMEM239 transmembrane protein 239 2 2
MIRT456806 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT457499 SLC35F6 solute carrier family 35 member F6 2 2
MIRT458037 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459041 ZNF490 zinc finger protein 490 2 2
MIRT459135 FADS6 fatty acid desaturase 6 2 2
MIRT460126 CXCL16 C-X-C motif chemokine ligand 16 2 2
MIRT460506 FAM105A family with sequence similarity 105 member A 2 6
MIRT460944 NOA1 nitric oxide associated 1 2 4
MIRT461101 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462641 PHF5A PHD finger protein 5A 2 2
MIRT463584 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466567 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467090 SRRD SRR1 domain containing 2 2
MIRT471093 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472596 NACC1 nucleus accumbens associated 1 2 2
MIRT473084 MORN4 MORN repeat containing 4 2 2
MIRT475977 GTPBP2 GTP binding protein 2 2 2
MIRT477054 FAM210A family with sequence similarity 210 member A 2 2
MIRT478303 DDX19A DEAD-box helicase 19A 2 4
MIRT478489 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478500 CYP1B1 cytochrome P450 family 1 subfamily B member 1 2 2
MIRT478858 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479096 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT479180 CLSPN claspin 2 2
MIRT479215 CLCC1 chloride channel CLIC like 1 2 2
MIRT481176 AVL9 AVL9 cell migration associated 2 6
MIRT483032 KHSRP KH-type splicing regulatory protein 2 4
MIRT485150 RASL10B RAS like family 10 member B 2 2
MIRT486104 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486319 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT489443 IFNLR1 interferon lambda receptor 1 2 2
MIRT489585 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489702 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490184 TMEM63C transmembrane protein 63C 2 2
MIRT491211 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491276 DHX40 DEAH-box helicase 40 2 2
MIRT495162 CNGA2 cyclic nucleotide gated channel alpha 2 2 4
MIRT495222 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT496820 CHRNB2 cholinergic receptor nicotinic beta 2 subunit 2 2
MIRT498602 KRT8 keratin 8 2 2
MIRT500003 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT502065 KRAS KRAS proto-oncogene, GTPase 2 2
MIRT508197 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508477 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT509635 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT511039 NRF1 nuclear respiratory factor 1 2 2
MIRT516684 ZNF860 zinc finger protein 860 2 4
MIRT518394 ZNF250 zinc finger protein 250 2 2
MIRT518907 CDC14B cell division cycle 14B 2 2
MIRT520502 TRAM2 translocation associated membrane protein 2 2 6
MIRT521459 RAD51 RAD51 recombinase 2 2
MIRT522354 NCKIPSD NCK interacting protein with SH3 domain 2 4
MIRT522594 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT523267 HIST1H2AE histone cluster 1 H2A family member e 2 2
MIRT523532 GLUL glutamate-ammonia ligase 2 4
MIRT524186 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT526842 PHC1 polyhomeotic homolog 1 2 2
MIRT528729 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT540695 BMP3 bone morphogenetic protein 3 2 2
MIRT544483 TRIM4 tripartite motif containing 4 2 2
MIRT551566 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT563619 ZNF277 zinc finger protein 277 2 2
MIRT564467 SLC35E2 solute carrier family 35 member E2 2 2
MIRT565031 VAV2 vav guanine nucleotide exchange factor 2 2 2
MIRT570294 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT572932 VDAC2 voltage dependent anion channel 2 2 2
MIRT573501 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573675 HES6 hes family bHLH transcription factor 6 2 2
MIRT609619 TRPC4AP transient receptor potential cation channel subfamily C member 4 associated protein 2 2
MIRT611966 PKD1 polycystin 1, transient receptor potential channel interacting 2 2
MIRT613930 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT617733 ATCAY ATCAY, caytaxin 2 4
MIRT618878 MBL2 mannose binding lectin 2 2 2
MIRT627590 SHROOM3 shroom family member 3 2 2
MIRT628516 ZNF878 zinc finger protein 878 2 2
MIRT633964 GRWD1 glutamate rich WD repeat containing 1 2 2
MIRT634530 NEGR1 neuronal growth regulator 1 2 2
MIRT635455 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT636412 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT639672 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642667 RGS6 regulator of G protein signaling 6 2 2
MIRT644080 A4GALT alpha 1,4-galactosyltransferase (P blood group) 2 2
MIRT647318 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647942 RNF152 ring finger protein 152 2 2
MIRT648687 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT648817 ZNF689 zinc finger protein 689 2 2
MIRT650347 TREM1 triggering receptor expressed on myeloid cells 1 2 2
MIRT650374 MOCS3 molybdenum cofactor synthesis 3 2 4
MIRT655935 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT663778 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT664297 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT665842 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT668929 COL9A2 collagen type IX alpha 2 chain 2 2
MIRT669673 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669907 KIAA0754 KIAA0754 2 4
MIRT670248 TRIM13 tripartite motif containing 13 2 2
MIRT670368 ULBP3 UL16 binding protein 3 2 4
MIRT670642 BVES blood vessel epicardial substance 2 2
MIRT670749 HOOK3 hook microtubule tethering protein 3 2 2
MIRT671184 ZNF891 zinc finger protein 891 2 2
MIRT673946 ZNF500 zinc finger protein 500 2 2
MIRT674682 PLCE1 phospholipase C epsilon 1 2 2
MIRT677912 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678876 FAM118A family with sequence similarity 118 member A 2 2
MIRT679528 RAB36 RAB36, member RAS oncogene family 2 2
MIRT680589 ZNF573 zinc finger protein 573 2 2
MIRT680650 KIAA1456 KIAA1456 2 2
MIRT681149 INTS7 integrator complex subunit 7 2 2
MIRT681177 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681234 DUSP19 dual specificity phosphatase 19 2 2
MIRT681626 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681643 SCRG1 stimulator of chondrogenesis 1 2 2
MIRT681926 KAT7 lysine acetyltransferase 7 2 2
MIRT682050 MRPS10 mitochondrial ribosomal protein S10 2 2
MIRT682156 SMS spermine synthase 2 2
MIRT683555 HAVCR1 hepatitis A virus cellular receptor 1 2 2
MIRT684304 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT684458 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT685986 CCDC77 coiled-coil domain containing 77 2 2
MIRT686782 AZF1 azoospermia factor 1 2 2
MIRT687329 OSMR oncostatin M receptor 2 2
MIRT687629 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT688792 CCNB1 cyclin B1 2 2
MIRT689756 PRR13 proline rich 13 2 2
MIRT690823 SGSM2 small G protein signaling modulator 2 2 2
MIRT691310 ZNF681 zinc finger protein 681 2 2
MIRT692676 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT693508 MOB3A MOB kinase activator 3A 2 2
MIRT694657 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694889 ZNF417 zinc finger protein 417 2 2
MIRT695740 ZNF117 zinc finger protein 117 2 2
MIRT697101 GPKOW G-patch domain and KOW motifs 2 2
MIRT698968 SPAST spastin 2 2
MIRT700379 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT703930 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT706234 SYT15 synaptotagmin 15 2 2
MIRT706494 SEPT6 septin 6 2 2
MIRT710451 BTNL3 butyrophilin like 3 2 2
MIRT711684 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT711997 F9 coagulation factor IX 2 2
MIRT712727 NCAPG2 non-SMC condensin II complex subunit G2 2 2
MIRT713111 TMBIM4 transmembrane BAX inhibitor motif containing 4 2 2
MIRT713156 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT713440 AJAP1 adherens junctions associated protein 1 2 2
MIRT713830 NUP98 nucleoporin 98 2 2
MIRT714979 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717411 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT718433 ZNF85 zinc finger protein 85 2 2
MIRT720575 SDHAF2 succinate dehydrogenase complex assembly factor 2 2 2
MIRT725098 TMEM120B transmembrane protein 120B 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-3192 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3192 Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-3192 Cisplatin 5460033 NSC119875 approved sensitive cell line (BxPC3)
hsa-miR-3192-5p Temozolomide 5394 NSC362856 approved sensitive cell line (U251)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved resistant cell line (A549)
hsa-miR-3192-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3192-5p Platinum 23939 resistant tissue
hsa-miR-3192-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3192-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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