miRTarBase - #MIRT681992


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pre-miRNA Information
pre-miRNA hsa-mir-1245a   
Genomic Coordinates chr2: 188978092 - 188978161
Description Homo sapiens miR-1245a stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-1245a
Sequence 45| AAGUGAUCUAAAGGCCUACAU |65
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN31562560 15 COSMIC
COSN26581044 19 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs906938680 2 dbSNP
rs1159117523 3 dbSNP
rs780486044 6 dbSNP
rs771479866 17 dbSNP
rs1002976932 18 dbSNP
rs1428029219 19 dbSNP
Putative Targets

Gene Information
Gene Symbol HRH4   
Synonyms AXOR35, BG26, GPCR105, GPRv53, H4, H4R, HH4R
Description histamine receptor H4
Transcript NM_001160166   
Other Transcripts NM_001143828 , NM_021624   
Expression
Putative miRNA Targets on HRH4
3'UTR of HRH4
(miRNA target sites are highlighted)		 
>HRH4|NM_001160166|3'UTR
   1 AACTCAACATACTGGGGTCTTGAAGATTGTTACTCTGATGGTGGCCGTTTGGGTGCTGGCCTTCTTAGTGAATGGGCCAA
  81 TGATTCTAGTTTCAGAGTCTTGGAAGGATGAAGGTAGTGAATGTGAACCTGGATTTTTTTCGGAATGGTACATCCTTGCC
 161 ATCACATCATTCTTGGAATTCGTGATCCCAGTCATCTTAGTCGCTTATTTCAACATGAATATTTATTGGAGCCTGTGGAA
 241 GCGTGATCATCTCAGTAGGTGCCAAAGCCATCCTGGACTGACTGCTGTCTCTTCCAACATCTGTGGACACTCATTCAGAG
 321 GTAGACTATCTTCAAGGAGATCTCTTTCTGCATCGACAGAAGTTCCTGCATCCTTTCATTCAGAGAGACAGAGGAGAAAG
 401 AGTAGTCTCATGTTTTCCTCAAGAACCAAGATGAATAGCAATACAATTGCTTCCAAAATGGGTTCCTTCTCCCAATCAGA
 481 TTCTGTAGCTCTTCACCAAAGGGAACATGTTGAACTGCTTAGAGCCAGGAGATTAGCCAAGTCACTGGCCATTCTCTTAG
 561 GGGTTTTTGCTGTTTGCTGGGCTCCATATTCTCTGTTCACAATTGTCCTTTCATTTTATTCCTCAGCAACAGGTCCTAAA
 641 TCAGTTTGGTATAGAATTGCATTTTGGCTTCAGTGGTTCAATTCCTTTGTCAATCCTCTTTTGTATCCATTGTGTCACAA
 721 GCGCTTTCAAAAGGCTTTCTTGAAAATATTTTGTATAAAAAAGCAACCTCTACCATCACAACACAGTCGGTCAGTATCTT
 801 CTTAAAGACAATTTTCTCACCTCTGTAAATTTTAGTCTCAATCTCACCTAAATGAATCAGGTCTGCCCTTTATCTTGCCC
 881 TTTTCATTCTACCAACAGATCTGCACTTTGAAGTCAATGGTAAATTACTCCAGTGAATAATAGCAGTATAATATGACTTG
 961 ATAATATTTTTGTAAACTTGTAGTCATAATAGTACTATATTCTTCTTAGTCCTCACCTCTTCCTTGTCTTTTAGATCTTA
1041 ATTTCATGCTGATTACAAAAATCCAGTTTTGTTTTCTTTCTATGTTCCATGCATAATACAGTCTTAAGTGAATTTCTCTT
1121 TTTTAATTTTATCGTAATAGAAACTTATCCAGTTTGAAAATCATTCCCTAAAGCATGCAATAGGAAAAAGAACCTCCTGG
1201 CTGGGACTGCCCAACTCTGTTCTGATCAGTGGGTGGGTGAGGTAGGGTTTGAGTTGGCAAGAGCAGGGAACGGGCATGTG
1281 CCCAGGTGAGCTCCTGTGTGTGTCCAGATTTTATATTCCTAATCCCAGTAAGGAAGAAAGCGTAGTGTGGGAGAGGAGAG
1361 AGCTGATGACTGCAGTTCTCAAAGGTCCTCAGTGAAGTTATTTTGGAGGCCCTGGTGGTCACAGGATCAGAAGGCAAGGG
1441 ATAGGCAGTGGTCACCAATGGTTGAAAGTATGGCTTGTCCCATTTCTTCCTGTTCTCTTTTTCTAGCTTCCACATCAGCT
1521 TCCTTTTTTGAGAACATATAGAAGAAGAAGGCTAAGAGATGGTGAAGAGACTGCATGATTAAACTAGATAGACCTGGTAT
1601 ACAGTCACTGAACTAGTAGATGTCAATAATTATTATTTTTAAAAATTTTTATTTGTTGGCCGGGCATGGTGGCTCACGCC
1681 TGAAATCCCAGCACTTTGGGAGGCCAAGGTGGGCGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCCAACATGGTGA
1761 AACCCCATCTGTACTAAAATACAAACAAGTAGCTGGTTGTGGCGCCGCATGCCTGTAGTCCCAGCTACTCGGGAGGCTGA
1841 GGCAGGGGAATTGCTTGAACCCGGGAGGCGGAGTTTGCCAGCCTGGCAACAGAACAAGACTCTGTCTAAAAAGAAAAAAA
1921 AATTTTTTTGTTTAAGACAGCATCTTGCTCTGTCTCCCAGGCTGGAGCGTAGTAATGCAATCATAGCTCACTGCAGCCTG
2001 GAACTCCTTGGCTCAAGCAATCCTGCTGCCTTGGCCTCCCAAGTATGTAGGACTACAGGTACTCGCCACCACACCTGGAT
2081 AATTAAAAAATTATTTCTGTAGAGATGAAGTCTCACTGTGTTGCCCAGCCTGGGTGTCAATAATTATTTTTTAAAAAAAA
2161 TTTTTAAAAAGGTTTTTTGAGACAGATTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTAGCATGATCAGGGATCACTGCA
2241 ACCTCTGCCTCCTGGGTTCAAGCGATTCTTGTGCCTAAGCCACCTGAGCAGCTGGGATTACAGGTGCATGCCACCATGCC
2321 TGGCTAATTTTGGTATTTTTAGTAGAGATGAGGTTTTGCCATTTTGGTCAGGCTGGAATTTTTTTTTTTTTAATTTTGAT
2401 AAGACAGGGTATTGCCGTGTTGGCCAGACTGGTCTCAAACTCCTGGGCTGAAACAATCCTCCCGCCTTGGCCTCCCAAAG
2481 TGCTGGGATTATAGGCACAAGACACCACAATAATTATTGCCTGTATGTCAATTATTATTTTAAAATATTGTTGTATTTAC
2561 TTAATGTCTTTAATGCATTTGCCCAATATTTTACATTGTACTGCTCAGAGGTATTCCTTTATTATGTGGTTAGCATAGGT
2641 TATACTTTGCTGACGATTCACATTTTATTAGTTTGGTTATGTTTTGTCCTTTTAAAACATTTTCTTTTGAGATGGGGGTC
2721 TTGCTCTGTTGCCCACGCAGGAGTGCAGTGGCATGCTCTCAGCTCACTGCAGCCCTGACTGCCTAGGCTCCAGCAATCTT
2801 CTTACGTCAGCCTCCAGAGTAGCTGGGACCGCAGGCACTTGCCACCACGCCCCACTAAAAATTTTTTAAATTGTTGCCTT
2881 TCTTGAAGTGTTCTCTGCCTGTCTTTGTCACAAAATTTCATTTTTCTCATAGTTAATTTCATCTCTCCGGTAAGATTTTA
2961 TTGGTGTTTCTTTTATAACTTTGCAGTTCTTACACCGTTTGGTGATTTTCATGTTTCTTAGAAACTTTAAACCTTTAACT
3041 TCAAACATTAAAATACAAGTCTTTTAAGTACATGAGTGCTTAGAAATGTACATAATGTTTATATACACTTATGCCTTACA
3121 TTAAAGTCCAATATGAGAAATACATGTTTAACATTCAATAATAATTTTAAAAATTTGAGAAATAAACTCTCATAAATGCA
3201 AAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uaCAUCCGGA--AAU--CUAGUGAa 5'
            ||| || |  | |  ||||||| 
Target 5' caGTA-GCATGATCAGGGATCACTg 3'
 2215 - 2238 146.00 -10.76
2 
miRNA  3' uaCAUCCGGAAAUCUAGUGAa 5'
            | | ||: | || ||||| 
Target 5' tgGCATGCTCTCAGCTCACTg 3'
 2749 - 2769 127.00 -6.70
3 
miRNA  3' uaCAUCCGGAAAU-CUAGUGaa 5'
            | ||||| | : |:||||  
Target 5' ttGGAGGCCCTGGTGGTCACag 3'
 1403 - 1424 123.00 -14.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM1680287 1 COSMIC
COSM3970508 4 COSMIC
COSM9922746 4 COSMIC
COSM987196 20 COSMIC
COSM473698 25 COSMIC
COSM8318918 42 COSMIC
COSM8812238 42 COSMIC
COSM6682138 56 COSMIC
COSM6297105 60 COSMIC
COSM4494419 65 COSMIC
COSM5414785 69 COSMIC
COSM5039728 76 COSMIC
COSM437993 85 COSMIC
COSM5520071 94 COSMIC
COSM8914208 106 COSMIC
COSM5043128 120 COSMIC
COSM9480739 130 COSMIC
COSM4433556 133 COSMIC
COSM9711058 133 COSMIC
COSM7577440 134 COSMIC
COSM987197 134 COSMIC
COSM2807932 141 COSMIC
COSM6202332 141 COSMIC
COSM3524648 142 COSMIC
COSM8841489 150 COSMIC
COSM4802127 151 COSMIC
COSM3959083 155 COSMIC
COSM1388108 160 COSMIC
COSM4854108 164 COSMIC
COSM3524649 167 COSMIC
COSM7882741 169 COSMIC
COSM987198 179 COSMIC
COSM9279938 183 COSMIC
COSM8012718 197 COSMIC
COSM987199 204 COSMIC
COSM7371510 212 COSMIC
COSM6149004 217 COSMIC
COSM3524650 218 COSMIC
COSM6083256 219 COSMIC
COSM6682140 231 COSMIC
COSM5741232 234 COSMIC
COSM8184954 241 COSMIC
COSM5417851 244 COSMIC
COSM5426109 250 COSMIC
COSM8266979 262 COSMIC
COSM5387915 263 COSMIC
COSM7128318 274 COSMIC
COSM311852 288 COSMIC
COSM6901213 290 COSMIC
COSM8008985 290 COSMIC
COSM5896347 295 COSMIC
COSM9391532 303 COSMIC
COSM4397953 313 COSMIC
COSM5804983 318 COSMIC
COSM3524651 319 COSMIC
COSM123652 320 COSMIC
COSM9877230 321 COSMIC
COSM5893986 331 COSMIC
COSM6439501 334 COSMIC
COSM708266 338 COSMIC
COSM9376596 338 COSMIC
COSM1209978 340 COSMIC
COSM4071585 351 COSMIC
COSM167843 356 COSMIC
COSM9683478 366 COSMIC
COSM8862613 367 COSMIC
COSM4960595 369 COSMIC
COSM9883153 373 COSMIC
COSM8174964 382 COSMIC
COSM2807938 386 COSMIC
COSM8685627 395 COSMIC
COSM372427 401 COSMIC
COSM9310825 401 COSMIC
COSM291926 410 COSMIC
COSM8597392 419 COSMIC
COSM708265 421 COSMIC
COSM9747130 434 COSMIC
COSM74946 450 COSMIC
COSM5702432 461 COSMIC
COSM1685754 463 COSMIC
COSM9623533 464 COSMIC
COSM7931612 472 COSMIC
COSM5499933 476 COSMIC
COSM4580348 479 COSMIC
COSM7518519 501 COSMIC
COSM5899739 502 COSMIC
COSM9667982 503 COSMIC
COSM3959084 505 COSMIC
COSM9582040 513 COSMIC
COSM9582039 514 COSMIC
COSM7371511 529 COSMIC
COSM3524652 530 COSMIC
COSM8508723 530 COSMIC
COSM4923768 535 COSMIC
COSM8907358 538 COSMIC
COSM6083255 548 COSMIC
COSM7805839 548 COSMIC
COSM2807942 549 COSMIC
COSM7535841 553 COSMIC
COSM4979735 557 COSMIC
COSM9712664 557 COSMIC
COSM9647796 562 COSMIC
COSM1494052 571 COSMIC
COSM1711044 585 COSMIC
COSM5632715 608 COSMIC
COSM4071586 618 COSMIC
COSM7699649 622 COSMIC
COSM3821268 625 COSMIC
COSM1388110 642 COSMIC
COSM1209979 655 COSMIC
COSM708264 668 COSMIC
COSM3773374 672 COSMIC
COSM3773375 680 COSMIC
COSM9315753 683 COSMIC
COSM5891019 685 COSMIC
COSM8858321 691 COSMIC
COSM3773376 692 COSMIC
COSM5581325 697 COSMIC
COSM74947 706 COSMIC
COSM3729707 709 COSMIC
COSM9690304 710 COSMIC
COSM2807945 723 COSMIC
COSM987200 724 COSMIC
COSM4458728 729 COSMIC
COSM6224900 736 COSMIC
COSM5673133 749 COSMIC
COSM6682139 754 COSMIC
COSM9357978 763 COSMIC
COSM4274501 769 COSMIC
COSM4580349 769 COSMIC
COSM6556885 780 COSMIC
COSM5804206 784 COSMIC
COSM7557722 784 COSMIC
COSM4936760 789 COSMIC
COSM8183329 790 COSMIC
COSM5350440 793 COSMIC
COSM8171063 795 COSMIC
COSN30155603 819 COSMIC
COSN30150749 824 COSMIC
COSN31505136 836 COSMIC
COSN30512890 840 COSMIC
COSN30184822 844 COSMIC
COSN30481440 846 COSMIC
COSN7461613 846 COSMIC
COSN30447423 881 COSMIC
COSN30505467 882 COSMIC
COSN31967753 907 COSMIC
COSN1733388 977 COSMIC
COSN31967754 1023 COSMIC
COSN31967755 1029 COSMIC
COSN9328145 1039 COSMIC
COSN31967756 1081 COSMIC
COSN31967757 1088 COSMIC
COSN26495697 1128 COSMIC
COSN4771346 1162 COSMIC
COSN217051 1235 COSMIC
COSN24781205 1410 COSMIC
COSN20093414 1483 COSMIC
COSN31967758 1508 COSMIC
COSN9328146 1581 COSMIC
COSN31967759 1613 COSMIC
COSN25390504 1756 COSMIC
COSN31967760 1821 COSMIC
COSN5422625 1826 COSMIC
COSN6116201 1871 COSMIC
COSN17267162 2154 COSMIC
COSN15843857 2157 COSMIC
COSN9328147 2253 COSMIC
COSN29622810 2342 COSMIC
COSN31967761 2752 COSMIC
COSN1204188 2850 COSMIC
COSN31967762 2920 COSMIC
COSN32155652 2927 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1462297615 1 dbSNP
rs764386766 8 dbSNP
rs894564616 13 dbSNP
rs1252780301 17 dbSNP
rs767733893 18 dbSNP
rs1321327368 27 dbSNP
rs1310900798 31 dbSNP
rs995965195 33 dbSNP
rs1159616683 34 dbSNP
rs757444582 35 dbSNP
rs376595140 36 dbSNP
rs143995992 39 dbSNP
rs1365663685 40 dbSNP
rs1406327452 44 dbSNP
rs11665084 46 dbSNP
rs753573404 47 dbSNP
rs780120010 48 dbSNP
rs1309681962 50 dbSNP
rs953437853 54 dbSNP
rs1019854440 56 dbSNP
rs754610658 57 dbSNP
rs116172621 60 dbSNP
rs777602176 61 dbSNP
rs1019201985 62 dbSNP
rs1437703802 67 dbSNP
rs746821901 68 dbSNP
rs770882337 69 dbSNP
rs1177554169 70 dbSNP
rs1409973830 77 dbSNP
rs577319007 80 dbSNP
rs1164005657 81 dbSNP
rs140777456 82 dbSNP
rs778424443 84 dbSNP
rs966116549 88 dbSNP
rs745531655 90 dbSNP
rs1196127289 94 dbSNP
rs769367107 99 dbSNP
rs975554538 101 dbSNP
rs1450984210 108 dbSNP
rs1263890084 109 dbSNP
rs774932796 114 dbSNP
rs763500270 116 dbSNP
rs764553661 117 dbSNP
rs1308578495 118 dbSNP
rs1361424243 120 dbSNP
rs1377455216 123 dbSNP
rs774743992 125 dbSNP
rs376506423 129 dbSNP
rs1362273244 131 dbSNP
rs150102935 133 dbSNP
rs747889390 134 dbSNP
rs750584363 139 dbSNP
rs756333613 142 dbSNP
rs754846080 143 dbSNP
rs753915955 146 dbSNP
rs1182866234 153 dbSNP
rs866983669 160 dbSNP
rs1365841742 165 dbSNP
rs539561152 166 dbSNP
rs778698147 167 dbSNP
rs1166171131 170 dbSNP
rs1389020635 172 dbSNP
rs746991054 173 dbSNP
rs377649493 177 dbSNP
rs1357744969 179 dbSNP
rs745515394 180 dbSNP
rs769631588 182 dbSNP
rs775040150 183 dbSNP
rs1433609880 188 dbSNP
rs748784371 194 dbSNP
rs1362766012 196 dbSNP
rs138611957 199 dbSNP
rs774668999 200 dbSNP
rs148875532 203 dbSNP
rs773632780 204 dbSNP
rs1261809128 207 dbSNP
rs771532637 215 dbSNP
rs907401824 216 dbSNP
rs760866060 226 dbSNP
rs766550499 227 dbSNP
rs1257526905 232 dbSNP
rs754123121 233 dbSNP
rs765375654 234 dbSNP
rs927907094 236 dbSNP
rs1475473856 240 dbSNP
rs1458305618 242 dbSNP
rs115230320 243 dbSNP
rs540401617 244 dbSNP
rs757334783 248 dbSNP
rs866992205 249 dbSNP
rs11662595 250 dbSNP
rs750289020 251 dbSNP
rs1488326922 271 dbSNP
rs755757125 274 dbSNP
rs779530887 275 dbSNP
rs1432937492 276 dbSNP
rs1273203526 277 dbSNP
rs892114598 288 dbSNP
rs748989538 295 dbSNP
rs746608877 302 dbSNP
rs778488149 305 dbSNP
rs748648984 309 dbSNP
rs773536345 310 dbSNP
rs1283439601 311 dbSNP
rs760988839 315 dbSNP
rs771350108 323 dbSNP
rs138191025 329 dbSNP
rs1272027539 334 dbSNP
rs200524143 336 dbSNP
rs116314403 338 dbSNP
rs577543077 341 dbSNP
rs1427146140 346 dbSNP
rs1471830523 347 dbSNP
rs761824348 353 dbSNP
rs116360028 355 dbSNP
rs372177844 356 dbSNP
rs755813129 359 dbSNP
rs779909323 361 dbSNP
rs1405726479 362 dbSNP
rs1262732249 363 dbSNP
rs753364037 369 dbSNP
rs771737805 382 dbSNP
rs754725501 385 dbSNP
rs778380714 387 dbSNP
rs1351309174 388 dbSNP
rs1048981773 390 dbSNP
rs113494520 402 dbSNP
rs1287055396 403 dbSNP
rs1465747703 404 dbSNP
rs747705828 411 dbSNP
rs773096238 411 dbSNP
rs771602529 412 dbSNP
rs575538185 414 dbSNP
rs376308497 418 dbSNP
rs746905385 420 dbSNP
rs1265584652 421 dbSNP
rs1043387035 422 dbSNP
rs201245563 424 dbSNP
rs777124514 433 dbSNP
rs1471410364 436 dbSNP
rs770107394 437 dbSNP
rs775677397 439 dbSNP
rs763083138 444 dbSNP
rs1165608587 447 dbSNP
rs889005723 450 dbSNP
rs997026552 459 dbSNP
rs764288864 460 dbSNP
rs867641946 472 dbSNP
rs1338689960 476 dbSNP
rs770870872 476 dbSNP
rs773223791 477 dbSNP
rs760540221 478 dbSNP
rs760664429 478 dbSNP
rs58154316 484 dbSNP
rs753724437 485 dbSNP
rs754564993 488 dbSNP
rs764830115 496 dbSNP
rs752369810 498 dbSNP
rs147463040 500 dbSNP
rs866575154 504 dbSNP
rs1339627444 509 dbSNP
rs1194888510 515 dbSNP
rs1245497531 516 dbSNP
rs777272194 522 dbSNP
rs1439952650 523 dbSNP
rs1185919741 524 dbSNP
rs372183663 527 dbSNP
rs757843291 532 dbSNP
rs1185497850 539 dbSNP
rs532935260 542 dbSNP
rs746287648 543 dbSNP
rs1168734282 549 dbSNP
rs770309894 550 dbSNP
rs1411413924 555 dbSNP
rs1341014410 559 dbSNP
rs775802330 561 dbSNP
rs1381928913 562 dbSNP
rs867023836 563 dbSNP
rs545909864 567 dbSNP
rs201686910 570 dbSNP
rs1318681901 572 dbSNP
rs993563191 574 dbSNP
rs768786762 580 dbSNP
rs774636951 582 dbSNP
rs760514429 585 dbSNP
rs766387689 587 dbSNP
rs141897320 589 dbSNP
rs528544378 590 dbSNP
rs150639126 593 dbSNP
rs776385313 611 dbSNP
rs139932565 613 dbSNP
rs1185982064 621 dbSNP
rs758115692 623 dbSNP
rs1428024989 633 dbSNP
rs116715978 634 dbSNP
rs1248799304 643 dbSNP
rs751132957 645 dbSNP
rs757678921 649 dbSNP
rs915898739 653 dbSNP
rs970330209 654 dbSNP
rs781692140 658 dbSNP
rs928808700 663 dbSNP
rs1405088946 671 dbSNP
rs746380432 676 dbSNP
rs1338658780 682 dbSNP
rs756485602 684 dbSNP
rs780567471 685 dbSNP
rs1295748515 689 dbSNP
rs749592787 697 dbSNP
rs769056439 700 dbSNP
rs1207033804 701 dbSNP
rs778835181 703 dbSNP
rs1264598611 704 dbSNP
rs748298940 707 dbSNP
rs772066963 710 dbSNP
rs776574126 716 dbSNP
rs759476238 718 dbSNP
rs1205776417 720 dbSNP
rs1250019123 722 dbSNP
rs769575154 723 dbSNP
rs149820026 724 dbSNP
rs946478328 728 dbSNP
rs776628029 729 dbSNP
rs1428293631 734 dbSNP
rs762574759 735 dbSNP
rs751206706 736 dbSNP
rs761334607 738 dbSNP
rs1043359718 740 dbSNP
rs901157949 749 dbSNP
rs766946164 750 dbSNP
rs750872671 754 dbSNP
rs756749323 756 dbSNP
rs74604924 759 dbSNP
rs77041280 760 dbSNP
rs1422933507 762 dbSNP
rs146404280 764 dbSNP
rs1302177940 768 dbSNP
rs531238280 769 dbSNP
rs1225707021 770 dbSNP
rs34682566 770 dbSNP
rs759611408 772 dbSNP
rs550963133 775 dbSNP
rs755218929 776 dbSNP
rs1316840229 784 dbSNP
rs1240393116 785 dbSNP
rs115905515 789 dbSNP
rs150959048 790 dbSNP
rs146425485 800 dbSNP
rs1269842355 803 dbSNP
rs745793936 805 dbSNP
rs769086465 808 dbSNP
rs775238085 809 dbSNP
rs1401884587 812 dbSNP
rs1291544257 819 dbSNP
rs762701105 822 dbSNP
rs1159777195 830 dbSNP
rs768353175 836 dbSNP
rs773991956 842 dbSNP
rs761373986 844 dbSNP
rs370363669 848 dbSNP
rs374673491 849 dbSNP
rs1406461572 851 dbSNP
rs1026157879 854 dbSNP
rs749957443 855 dbSNP
rs774955412 858 dbSNP
rs1034702641 863 dbSNP
rs540071572 866 dbSNP
rs952068932 873 dbSNP
rs1347589556 878 dbSNP
rs1006346906 881 dbSNP
rs867533377 894 dbSNP
rs959051733 899 dbSNP
rs990488039 901 dbSNP
rs1343446501 902 dbSNP
rs1022956031 907 dbSNP
rs1161378529 915 dbSNP
rs1401752349 922 dbSNP
rs920543688 928 dbSNP
rs1174699461 929 dbSNP
rs1481645720 936 dbSNP
rs1270589770 938 dbSNP
rs930537453 943 dbSNP
rs1183432075 947 dbSNP
rs1239823627 948 dbSNP
rs553579780 949 dbSNP
rs566615293 954 dbSNP
rs535537705 956 dbSNP
rs1164108944 966 dbSNP
rs907671251 989 dbSNP
rs555354712 991 dbSNP
rs1221463728 995 dbSNP
rs140705862 998 dbSNP
rs956305553 999 dbSNP
rs1218172986 1000 dbSNP
rs988907067 1004 dbSNP
rs914746233 1009 dbSNP
rs946466889 1012 dbSNP
rs1421126 1018 dbSNP
rs1408932695 1033 dbSNP
rs1471250618 1041 dbSNP
rs775865524 1042 dbSNP
rs1430338573 1073 dbSNP
rs1170452713 1084 dbSNP
rs1298538078 1096 dbSNP
rs557734223 1098 dbSNP
rs9945837 1100 dbSNP
rs540065798 1125 dbSNP
rs1049746564 1126 dbSNP
rs1359501271 1127 dbSNP
rs1247626832 1132 dbSNP
rs150098766 1134 dbSNP
rs528572842 1135 dbSNP
rs1011126063 1142 dbSNP
rs529676732 1146 dbSNP
rs902662355 1149 dbSNP
rs1003695796 1174 dbSNP
rs1298053010 1179 dbSNP
rs1034796704 1181 dbSNP
rs959104180 1185 dbSNP
rs1421125 1191 dbSNP
rs145858541 1193 dbSNP
rs540001870 1197 dbSNP
rs1331068441 1198 dbSNP
rs571189403 1199 dbSNP
rs1352392934 1200 dbSNP
rs1172156558 1201 dbSNP
rs533662104 1210 dbSNP
rs1244364780 1215 dbSNP
rs1384012341 1216 dbSNP
rs1181253694 1233 dbSNP
rs141889841 1234 dbSNP
rs1186770030 1237 dbSNP
rs1003259163 1238 dbSNP
rs1035704680 1240 dbSNP
rs187732299 1247 dbSNP
rs370381012 1255 dbSNP
rs1421430086 1262 dbSNP
rs1021741696 1266 dbSNP
rs1289619844 1266 dbSNP
rs968881317 1270 dbSNP
rs754143312 1272 dbSNP
rs1356041926 1273 dbSNP
rs1390014878 1280 dbSNP
rs1375903578 1282 dbSNP
rs1299108751 1295 dbSNP
rs1462146680 1296 dbSNP
rs1364600209 1304 dbSNP
rs1161111680 1316 dbSNP
rs975878854 1319 dbSNP
rs1385782609 1329 dbSNP
rs1302191144 1330 dbSNP
rs910265071 1333 dbSNP
rs535542177 1342 dbSNP
rs555143590 1343 dbSNP
rs1163003649 1352 dbSNP
rs1289915519 1356 dbSNP
rs943140576 1359 dbSNP
rs568852800 1361 dbSNP
rs1360328853 1363 dbSNP
rs754681385 1366 dbSNP
rs1237427780 1373 dbSNP
rs1363942838 1383 dbSNP
rs114428193 1392 dbSNP
rs1404778603 1402 dbSNP
rs1274726793 1415 dbSNP
rs929199199 1418 dbSNP
rs946980067 1427 dbSNP
rs1406233793 1429 dbSNP
rs1157488445 1430 dbSNP
rs1042668480 1443 dbSNP
rs1264237607 1448 dbSNP
rs1047703564 1461 dbSNP
rs902754907 1474 dbSNP
rs1463053340 1475 dbSNP
rs1206858764 1477 dbSNP
rs1000519267 1478 dbSNP
rs1032619631 1480 dbSNP
rs1188476933 1483 dbSNP
rs1423410296 1487 dbSNP
rs887594061 1490 dbSNP
rs1480024368 1517 dbSNP
rs1056644879 1519 dbSNP
rs566548958 1521 dbSNP
rs1406674733 1522 dbSNP
rs866051309 1538 dbSNP
rs1470926615 1539 dbSNP
rs1203495554 1545 dbSNP
rs1487125742 1559 dbSNP
rs1261868839 1564 dbSNP
rs1223279266 1568 dbSNP
rs1318511906 1577 dbSNP
rs1321928514 1579 dbSNP
rs577562816 1595 dbSNP
rs1430911950 1598 dbSNP
rs1271556328 1599 dbSNP
rs1044252017 1600 dbSNP
rs905911310 1602 dbSNP
rs1380065449 1609 dbSNP
rs1218936938 1615 dbSNP
rs1002962827 1617 dbSNP
rs1284362218 1622 dbSNP
rs1035652126 1641 dbSNP
rs1207365019 1642 dbSNP
rs1268097487 1643 dbSNP
rs1447654780 1652 dbSNP
rs540127411 1653 dbSNP
rs891832733 1654 dbSNP
rs1480860454 1656 dbSNP
rs1372775224 1659 dbSNP
rs1010432053 1662 dbSNP
rs1021807371 1663 dbSNP
rs1218112920 1667 dbSNP
rs1263031188 1668 dbSNP
rs968953536 1671 dbSNP
rs1245145744 1678 dbSNP
rs985997781 1679 dbSNP
rs1018445822 1680 dbSNP
rs964810770 1683 dbSNP
rs553552673 1689 dbSNP
rs573472492 1693 dbSNP
rs1327614580 1699 dbSNP
rs1429702262 1705 dbSNP
rs1481316479 1706 dbSNP
rs1156849104 1707 dbSNP
rs189646121 1710 dbSNP
rs1400724792 1711 dbSNP
rs1451771848 1715 dbSNP
rs928978330 1716 dbSNP
rs533683739 1730 dbSNP
rs1414868948 1734 dbSNP
rs909101587 1736 dbSNP
rs1166432290 1737 dbSNP
rs941968266 1743 dbSNP
rs559096496 1751 dbSNP
rs1390791311 1756 dbSNP
rs1044585991 1763 dbSNP
rs183374167 1764 dbSNP
rs946768980 1769 dbSNP
rs938758798 1770 dbSNP
rs1437672804 1772 dbSNP
rs1193647674 1776 dbSNP
rs1271336867 1776 dbSNP
rs1227017085 1779 dbSNP
rs1274662939 1781 dbSNP
rs1057174279 1796 dbSNP
rs891898349 1807 dbSNP
rs564461296 1808 dbSNP
rs1043046237 1810 dbSNP
rs533679235 1813 dbSNP
rs112930638 1819 dbSNP
rs1007179502 1822 dbSNP
rs1018848201 1829 dbSNP
rs776368702 1830 dbSNP
rs45572832 1831 dbSNP
rs1162973582 1832 dbSNP
rs1422894742 1833 dbSNP
rs1387613714 1836 dbSNP
rs1164282086 1840 dbSNP
rs1470075930 1841 dbSNP
rs1030064448 1863 dbSNP
rs950461758 1864 dbSNP
rs1490775111 1866 dbSNP
rs1252145738 1870 dbSNP
rs138449217 1871 dbSNP
rs908882374 1894 dbSNP
rs372492601 1895 dbSNP
rs1293339189 1896 dbSNP
rs1228749278 1900 dbSNP
rs980077646 1909 dbSNP
rs1232166007 1914 dbSNP
rs1277508751 1914 dbSNP
rs1461271314 1922 dbSNP
rs1444161758 1923 dbSNP
rs192171431 1923 dbSNP
rs201789112 1924 dbSNP
rs377216014 1925 dbSNP
rs1165608937 1937 dbSNP
rs1400581876 1941 dbSNP
rs1406482563 1942 dbSNP
rs1423497896 1948 dbSNP
rs913284360 1951 dbSNP
rs1473163837 1961 dbSNP
rs997360777 1962 dbSNP
rs1367117424 1964 dbSNP
rs1028802593 1969 dbSNP
rs556400179 1970 dbSNP
rs1247908360 1974 dbSNP
rs551002777 1978 dbSNP
rs915364967 1987 dbSNP
rs1282149325 1994 dbSNP
rs1225245364 1998 dbSNP
rs745561809 2000 dbSNP
rs1007538031 2031 dbSNP
rs1282400766 2033 dbSNP
rs1221867459 2040 dbSNP
rs1347640720 2042 dbSNP
rs577174518 2052 dbSNP
rs1430157920 2056 dbSNP
rs1444958106 2056 dbSNP
rs1039978029 2063 dbSNP
rs901438865 2065 dbSNP
rs574810410 2066 dbSNP
rs75139827 2076 dbSNP
rs939599961 2090 dbSNP
rs1294148225 2093 dbSNP
rs1354176455 2100 dbSNP
rs1479224304 2101 dbSNP
rs1426890204 2106 dbSNP
rs1191263736 2113 dbSNP
rs1474828307 2116 dbSNP
rs144002390 2124 dbSNP
rs1202711416 2125 dbSNP
rs1004675619 2126 dbSNP
rs553613940 2130 dbSNP
rs963104851 2134 dbSNP
rs1183865131 2143 dbSNP
rs1201583339 2147 dbSNP
rs1235733006 2147 dbSNP
rs1443469214 2148 dbSNP
rs1302329956 2153 dbSNP
rs573862730 2153 dbSNP
rs536083803 2154 dbSNP
rs1359889235 2160 dbSNP
rs1036000805 2161 dbSNP
rs940409935 2161 dbSNP
rs556318946 2162 dbSNP
rs1471184502 2167 dbSNP
rs1028895913 2168 dbSNP
rs143265031 2169 dbSNP
rs992581614 2173 dbSNP
rs913106033 2174 dbSNP
rs1449975425 2175 dbSNP
rs946125142 2183 dbSNP
rs1412058212 2195 dbSNP
rs1484148142 2203 dbSNP
rs978842111 2204 dbSNP
rs544675127 2206 dbSNP
rs1256385702 2209 dbSNP
rs1332753611 2215 dbSNP
rs1306015424 2222 dbSNP
rs1276803969 2238 dbSNP
rs925925918 2239 dbSNP
rs1382712956 2240 dbSNP
rs774865789 2244 dbSNP
rs1313625908 2248 dbSNP
rs1398317898 2252 dbSNP
rs763663118 2262 dbSNP
rs553779856 2264 dbSNP
rs1363229771 2265 dbSNP
rs1440954933 2271 dbSNP
rs978146399 2274 dbSNP
rs1169901231 2278 dbSNP
rs1429907981 2289 dbSNP
rs1384524062 2292 dbSNP
rs1031071571 2297 dbSNP
rs751162203 2302 dbSNP
rs1040124700 2303 dbSNP
rs184208439 2320 dbSNP
rs934235530 2322 dbSNP
rs112886525 2324 dbSNP
rs578052760 2326 dbSNP
rs887308327 2333 dbSNP
rs476076 2334 dbSNP
rs1289686837 2345 dbSNP
rs1276350376 2349 dbSNP
rs1460822442 2354 dbSNP
rs476042 2358 dbSNP
rs772704227 2361 dbSNP
rs1447174280 2362 dbSNP
rs685298 2364 dbSNP
rs560772999 2365 dbSNP
rs188284306 2368 dbSNP
rs940463938 2370 dbSNP
rs1410072221 2372 dbSNP
rs898929953 2373 dbSNP
rs475997 2374 dbSNP
rs933024699 2378 dbSNP
rs1050514380 2379 dbSNP
rs1158067156 2379 dbSNP
rs1306610826 2379 dbSNP
rs1405930623 2381 dbSNP
rs529569794 2385 dbSNP
rs1183081541 2388 dbSNP
rs549359777 2392 dbSNP
rs1339313749 2393 dbSNP
rs1386515311 2394 dbSNP
rs192801626 2395 dbSNP
rs1296554155 2399 dbSNP
rs1328428545 2400 dbSNP
rs1021475504 2402 dbSNP
rs903040251 2403 dbSNP
rs1260720075 2405 dbSNP
rs766506358 2406 dbSNP
rs1020059590 2410 dbSNP
rs1228585450 2412 dbSNP
rs967205366 2417 dbSNP
rs1322674113 2418 dbSNP
rs1388051297 2430 dbSNP
rs960778299 2434 dbSNP
rs1288276936 2448 dbSNP
rs1455581293 2454 dbSNP
rs1390513076 2457 dbSNP
rs1224027665 2458 dbSNP
rs979019306 2459 dbSNP
rs1480219679 2463 dbSNP
rs148336545 2464 dbSNP
rs942788070 2465 dbSNP
rs1204043664 2466 dbSNP
rs1024022333 2480 dbSNP
rs1261147884 2481 dbSNP
rs969679248 2482 dbSNP
rs1466667182 2496 dbSNP
rs1261929986 2499 dbSNP
rs985425265 2528 dbSNP
rs1322362471 2532 dbSNP
rs1448394403 2535 dbSNP
rs1197153027 2542 dbSNP
rs975401741 2543 dbSNP
rs922634682 2546 dbSNP
rs1234768181 2551 dbSNP
rs909449542 2554 dbSNP
rs1331109624 2568 dbSNP
rs1428990248 2569 dbSNP
rs962214344 2576 dbSNP
rs934225594 2583 dbSNP
rs1432748742 2586 dbSNP
rs78378543 2602 dbSNP
rs1320939935 2606 dbSNP
rs887255930 2611 dbSNP
rs1410483272 2613 dbSNP
rs1174473980 2626 dbSNP
rs1466751880 2630 dbSNP
rs1453061072 2641 dbSNP
rs1372539156 2643 dbSNP
rs17797975 2648 dbSNP
rs933034612 2650 dbSNP
rs1249233299 2654 dbSNP
rs150833348 2655 dbSNP
rs1050106010 2656 dbSNP
rs1281186285 2668 dbSNP
rs1791266 2675 dbSNP
rs112313492 2676 dbSNP
rs947053455 2681 dbSNP
rs1302816834 2682 dbSNP
rs1250245806 2690 dbSNP
rs1225598956 2695 dbSNP
rs1001729916 2704 dbSNP
rs1344218908 2707 dbSNP
rs1034011118 2711 dbSNP
rs895512534 2718 dbSNP
rs1014105700 2719 dbSNP
rs1791528 2723 dbSNP
rs1338412170 2725 dbSNP
rs1335973353 2727 dbSNP
rs1396779688 2732 dbSNP
rs472407 2737 dbSNP
rs1431780159 2744 dbSNP
rs1285046063 2750 dbSNP
rs967278997 2755 dbSNP
rs978586166 2756 dbSNP
rs998724999 2759 dbSNP
rs1239526776 2761 dbSNP
rs1237647272 2766 dbSNP
rs763993676 2770 dbSNP
rs1442609860 2771 dbSNP
rs1352268704 2772 dbSNP
rs1207676111 2773 dbSNP
rs141816990 2787 dbSNP
rs964160061 2789 dbSNP
rs1490613951 2790 dbSNP
rs1343602900 2793 dbSNP
rs751533509 2799 dbSNP
rs146276633 2806 dbSNP
rs556090820 2807 dbSNP
rs955382711 2809 dbSNP
rs982800500 2820 dbSNP
rs1306468146 2821 dbSNP
rs1365573441 2822 dbSNP
rs530043704 2825 dbSNP
rs1006209829 2831 dbSNP
rs908766265 2832 dbSNP
rs1416640456 2833 dbSNP
rs941609616 2836 dbSNP
rs1164194666 2837 dbSNP
rs1163173749 2839 dbSNP
rs1366435945 2847 dbSNP
rs184853486 2849 dbSNP
rs1304755788 2853 dbSNP
rs1483848516 2857 dbSNP
rs1251851802 2862 dbSNP
rs926817102 2862 dbSNP
rs1449768889 2875 dbSNP
rs937094117 2877 dbSNP
rs780758309 2878 dbSNP
rs189314634 2881 dbSNP
rs923409499 2892 dbSNP
rs1307676465 2899 dbSNP
rs1337002785 2900 dbSNP
rs115737487 2904 dbSNP
rs1282692133 2911 dbSNP
rs1434487982 2912 dbSNP
rs578134085 2914 dbSNP
rs540659515 2915 dbSNP
rs1400638900 2944 dbSNP
rs139258773 2949 dbSNP
rs4800573 2950 dbSNP
rs947073390 2951 dbSNP
rs1225119417 2958 dbSNP
rs1042725320 2962 dbSNP
rs566513723 2971 dbSNP
rs1250003833 2987 dbSNP
rs866585328 2988 dbSNP
rs1000562455 2996 dbSNP
rs191341748 2997 dbSNP
rs964252945 2998 dbSNP
rs1265981874 3003 dbSNP
rs372852886 3007 dbSNP
rs1178254461 3015 dbSNP
rs1330079082 3024 dbSNP
rs755777490 3029 dbSNP
rs1262817831 3033 dbSNP
rs1217700270 3039 dbSNP
rs1029729807 3043 dbSNP
rs1275544230 3056 dbSNP
rs1012735895 3057 dbSNP
rs955455537 3059 dbSNP
rs982748155 3062 dbSNP
rs75682246 3072 dbSNP
rs962984372 3075 dbSNP
rs1006674181 3076 dbSNP
rs1386043934 3077 dbSNP
rs1174847188 3080 dbSNP
rs548872569 3087 dbSNP
rs1426614707 3095 dbSNP
rs1191315803 3110 dbSNP
rs962280155 3112 dbSNP
rs993683554 3136 dbSNP
rs570537542 3147 dbSNP
rs1465131652 3152 dbSNP
rs1236681676 3157 dbSNP
rs955072356 3168 dbSNP
rs1352523604 3169 dbSNP
rs1227820077 3174 dbSNP
rs1340658430 3178 dbSNP
rs986307452 3187 dbSNP
rs1300526534 3191 dbSNP
rs1436484233 3196 dbSNP
rs1017808167 3198 dbSNP
rs61020908 3199 dbSNP
rs978842386 3204 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293/HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1067870. RNA binding protein: AGO2. Condition:Ago2 IP-seq (mitotic cells) ...

- Kishore S; Gruber AR; Jedlinski DJ; Syed et al., 2013, Genome biology.

Article - Kishore S; Gruber AR; Jedlinski DJ; Syed et al.
- Genome biology, 2013
BACKGROUND: In recent years, a variety of small RNAs derived from other RNAs with well-known functions such as tRNAs and snoRNAs, have been identified. The functional relevance of these RNAs is largely unknown. To gain insight into the complexity of snoRNA processing and the functional relevance of snoRNA-derived small RNAs, we sequence long and short RNAs, small RNAs that co-precipitate with the Argonaute 2 protein and RNA fragments obtained in photoreactive nucleotide-enhanced crosslinking and immunoprecipitation (PAR-CLIP) of core snoRNA-associated proteins. RESULTS: Analysis of these data sets reveals that many loci in the human genome reproducibly give rise to C/D box-like snoRNAs, whose expression and evolutionary conservation are typically less pronounced relative to the snoRNAs that are currently cataloged. We further find that virtually all C/D box snoRNAs are specifically processed inside the regions of terminal complementarity, retaining in the mature form only 4-5 nucleotides upstream of the C box and 2-5 nucleotides downstream of the D box. Sequencing of the total and Argonaute 2-associated populations of small RNAs reveals that despite their cellular abundance, C/D box-derived small RNAs are not efficiently incorporated into the Ago2 protein. CONCLUSIONS: We conclude that the human genome encodes a large number of snoRNAs that are processed along the canonical pathway and expressed at relatively low levels. Generation of snoRNA-derived processing products with alternative, particularly miRNA-like, functions appears to be uncommon.
LinkOut: [PMID: 23706177]
CLIP-seq Support 1 for dataset GSM1067870
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293/HeLa / Ago2 IP-seq (mitotic cells)
Location of target site ENST00000256906.4 | 3UTR | AUCACUGCAACCUCUGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23706177 / GSE43666
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
BRCA -0.967 0.08 -0.500 0.33 3 Click to see details
BLCA -0.201 0.44 0.500 0.33 3 Click to see details
UCEC 0.152 0.45 0.500 0.33 3 Click to see details
HNSC 0.052 0.46 0.214 0.32 7 Click to see details
HNSC 0.052 0.46 0.214 0.32 7 Click to see details
HNSC 0.052 0.46 0.214 0.32 7 Click to see details
HNSC 0.052 0.46 0.214 0.32 7 Click to see details
HNSC 0.052 0.46 0.214 0.32 7 Click to see details
109 hsa-miR-1245a Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT006574 BRCA2 BRCA2, DNA repair associated 2 1
MIRT055432 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT063879 RASSF8 Ras association domain family member 8 2 6
MIRT077025 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT095775 GRPEL2 GrpE like 2, mitochondrial 2 10
MIRT099172 MAP3K4 mitogen-activated protein kinase kinase kinase 4 2 2
MIRT175616 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT456518 LYPLAL1 lysophospholipase like 1 2 2
MIRT464457 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465747 TMPPE transmembrane protein with metallophosphoesterase domain 2 2
MIRT468257 SFXN4 sideroflexin 4 2 2
MIRT469216 RICTOR RPTOR independent companion of MTOR complex 2 2 2
MIRT472045 NPAT nuclear protein, coactivator of histone transcription 2 2
MIRT481795 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 2 2
MIRT500154 CREBBP CREB binding protein 2 2
MIRT506514 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 4
MIRT506915 KBTBD8 kelch repeat and BTB domain containing 8 2 6
MIRT513901 GRB10 growth factor receptor bound protein 10 2 6
MIRT519128 ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 2 2
MIRT528121 FOXH1 forkhead box H1 2 2
MIRT528942 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT540580 CEP89 centrosomal protein 89 2 2
MIRT545858 ZNF264 zinc finger protein 264 2 4
MIRT547147 PGM3 phosphoglucomutase 3 2 2
MIRT547434 MED4 mediator complex subunit 4 2 2
MIRT554650 ROBO1 roundabout guidance receptor 1 2 2
MIRT558524 CSRNP3 cysteine and serine rich nuclear protein 3 2 2
MIRT559762 ABHD5 abhydrolase domain containing 5 2 2
MIRT560438 GOLGA7B golgin A7 family member B 2 2
MIRT561974 LRRC59 leucine rich repeat containing 59 2 2
MIRT562442 DDIT4 DNA damage inducible transcript 4 2 2
MIRT563489 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT568265 BMP2K BMP2 inducible kinase 2 2
MIRT572522 KIAA0232 KIAA0232 2 2
MIRT612801 LSM14A LSM14A, mRNA processing body assembly factor 2 2
MIRT621533 ZNF507 zinc finger protein 507 2 2
MIRT625205 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT625615 ZNF84 zinc finger protein 84 2 2
MIRT629215 C12orf66 chromosome 12 open reading frame 66 2 2
MIRT629509 AS3MT arsenite methyltransferase 2 2
MIRT629769 STK25 serine/threonine kinase 25 2 2
MIRT630908 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT632508 RAB13 RAB13, member RAS oncogene family 2 2
MIRT636871 ARSE arylsulfatase E (chondrodysplasia punctata 1) 2 2
MIRT637106 CXorf23 BCLAF1 and THRAP3 family member 3 2 2
MIRT637332 FAM9B family with sequence similarity 9 member B 2 2
MIRT637553 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT637639 ZNF431 zinc finger protein 431 2 2
MIRT637836 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT638326 RNF11 ring finger protein 11 2 2
MIRT638393 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT642450 CLUAP1 clusterin associated protein 1 2 2
MIRT642616 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT643133 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT644324 NFKBID NFKB inhibitor delta 2 2
MIRT645150 DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease 2 2
MIRT645673 ADK adenosine kinase 2 2
MIRT646091 MGST3 microsomal glutathione S-transferase 3 2 2
MIRT646858 SLC35E4 solute carrier family 35 member E4 2 2
MIRT650153 ZNF426 zinc finger protein 426 2 2
MIRT652483 TMEM181 transmembrane protein 181 2 2
MIRT653790 SIRPA signal regulatory protein alpha 2 2
MIRT655526 PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 2 2
MIRT657077 JPH2 junctophilin 2 2 2
MIRT657322 HOOK3 hook microtubule tethering protein 3 2 2
MIRT662036 FUT2 fucosyltransferase 2 2 2
MIRT662322 ADM2 adrenomedullin 2 2 2
MIRT663211 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT663559 CCR6 C-C motif chemokine receptor 6 2 2
MIRT663937 ZNF554 zinc finger protein 554 2 2
MIRT664689 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 2 2
MIRT664709 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT665291 ZFP14 ZFP14 zinc finger protein 2 2
MIRT665572 TXNL1 thioredoxin like 1 2 2
MIRT667068 PAOX polyamine oxidase 2 2
MIRT667304 MYO5A myosin VA 2 2
MIRT667442 METTL14 methyltransferase like 14 2 2
MIRT668048 GTPBP10 GTP binding protein 10 2 2
MIRT669604 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT671088 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT674361 SLC35E3 solute carrier family 35 member E3 2 2
MIRT674962 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT676394 SEC24D SEC24 homolog D, COPII coat complex component 2 2
MIRT676819 AGMAT agmatinase 2 2
MIRT676891 ENSA endosulfine alpha 2 2
MIRT677059 ZNF34 zinc finger protein 34 2 2
MIRT678424 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678735 SRCAP Snf2 related CREBBP activator protein 2 2
MIRT678930 XPOT exportin for tRNA 2 2
MIRT678954 MYADM myeloid associated differentiation marker 2 2
MIRT679228 MAN2A2 mannosidase alpha class 2A member 2 2 2
MIRT679765 TLR6 toll like receptor 6 2 2
MIRT681992 HRH4 histamine receptor H4 2 2
MIRT687405 NSUN4 NOP2/Sun RNA methyltransferase family member 4 2 2
MIRT694570 RBMXL1 RNA binding motif protein, X-linked like 1 2 2
MIRT698449 TM4SF1 transmembrane 4 L six family member 1 2 2
MIRT706406 HAS2 hyaluronan synthase 2 2 2
MIRT706582 ZNF432 zinc finger protein 432 2 2
MIRT706838 VHLL VHL like 2 2
MIRT706909 DVL3 dishevelled segment polarity protein 3 2 2
MIRT707052 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT708583 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT708988 CABP4 calcium binding protein 4 2 2
MIRT713041 ADRA2B adrenoceptor alpha 2B 2 2
MIRT713731 SUCO SUN domain containing ossification factor 2 2
MIRT714968 RAB21 RAB21, member RAS oncogene family 2 2
MIRT717485 PDE4DIP phosphodiesterase 4D interacting protein 2 2
MIRT722826 KLK2 kallikrein related peptidase 2 2 2
MIRT723305 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1245a Trametinib 11707110 NSC758246 approved resistant High Melanoma cell line (M14) (500nM)
hsa-miR-1245a Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (M14) (500nM)
hsa-miR-1245a Trametinib 11707110 NSC758246 approved resistant High Melanoma cell line (M14) (1uM)
hsa-miR-1245a Vemurafenib 42611257 NSC761431 approved resistant High Melanoma cell line (M14) (1uM)
hsa-miR-1245a Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-1245a Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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