pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ITGA3   
Synonyms CD49C, FRP-2, GAP-B3, GAPB3, ILNEB, MSK18, VCA-2, VL3A, VLA3a
Description integrin subunit alpha 3
Transcript NM_002204   
Expression
Putative miRNA Targets on ITGA3
3'UTR of ITGA3
(miRNA target sites are highlighted)
>ITGA3|NM_002204|3'UTR
   1 GGGGGCAGCCCCCCGCCCCCGGCCCACCTGGTGTGACTTCTTTAAGCGGACCCGCTATTATCAGATCATGCCCAAGTACC
  81 ACGCAGTGCGGATCCGGGAGGAGGAGCGCTACCCACCTCCAGGGAGCACCCTGCCCACCAAGAAGCACTGGGTGACCAGC
 161 TGGCAGACTCGGGACCAATACTACTGACGTCCTCCCTGATCCCACCCCCTCCTCCCCCAGTGTCCCCTTTCTTCCTATTT
 241 ATCATAAGTTATGCCTCTGACAGTCCACAGGGGCCACCACCTTTGGCTGGTAGCAGCAGGCTCAGGCACATACACCTCGT
 321 CAAGAGCATGCACATGCTGTCTGGCCCTGGGGATCTTCCCACAGGAGGGCCAGCGCTGTGGACCTTACAACGCCGAGTGC
 401 ACTGCATTCCTGTGCCCTAGATGCACGTGGGGCCCACTGCTCGTGGACTGTGCTGGTGCATCACGGATGGTGCATGGGCT
 481 CGCCGTGTCTCAGCCTCTGCCAGCGCCAAAACAAGCCAAAGAGCCTCCCACCAGAGCCGGGAGGAAAAGGCCCCTGCAAT
 561 GTGGTGACACCTCCCCCTTTCACACTGGATCCATCTTGAGCCACAGTCACTGGATTGACTTTGCTGTCAAAACTACTGAC
 641 AGGGAGCAGCCCCCGGGCCGCTGGCTGGTGGGCCCCCAATGACACCCATGCCAGAGAGGTGGGGATCCTGCCTAAGGTTG
 721 TCTACGGGGGCACTTGGAGGACCTGGCGTGCTCAGACCCAACAGCAAAGGAACTAGAAAGAAGGACCCAGAACGGCTTGC
 801 TTTCCTGCATCTCTGTGAAGCCTCTCTCCTTGGCCACAGACTGAACTCGCAGGGAATGCAGCAGGAAGGAACAAAGACAG
 881 GCAAACGGCAACGTAGCCTGGGCTCACTGTGCTGGGGCACGGCGGGATCCTCCACAGAGAGGAGGGGACCAATTCTGGAC
 961 AGACAGATGTTGGGAGGATACAGAGGAGATGCCACTTCTCACTCACCACTACCAGCCAGCCTCAGAAGGCCCCAGAGAGA
1041 CCCTGCAAGACCACGGAGGGAGCGACACTTGAATGTAGAATAGGCAGGGGGCCCTGCCCCACCCCATCCAGCCAGACCCC
1121 ACGCTGACCATGCGTCAGGGGCCTAGAGGTGGAGTTCTTAGCTATCCTTGGCTTTCAGAGCCAGCCTGGCTCTGCCCCCT
1201 CCCCCATGGGCTGTGTCCTAAGGCCCATTTGAGAAGCTGAGGCTAGTTCCAGAAAACCTCTCCTGACCCCTGCCTGTTGG
1281 CAGGCCCACTCCCCAGCCCCAGCCCCTTCCATGGTACTGTAGCAGGGGAATTCCCTCCCCCTCCTTGTGCCTTCTTTGTA
1361 TATAGGCTTCTCACGGCGACCAATAAACAGCTCCCAGTTTGTATGCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugacgUCGG-AACU-GGAGGGUc 5'
               ||||   || ||||||| 
Target 5' aaacaAGCCAAAGAGCCTCCCAc 3'
509 - 531 148.00 -17.00
2
miRNA  3' ugACGUCGGAACU----GGAGGGUc 5'
            | ::||| ||:    |:||||| 
Target 5' tgTCTGGCCCTGGGGATCTTCCCAc 3'
338 - 362 137.00 -16.40
3
miRNA  3' ugACGU--CGGAAC--UGGAGGGuc 5'
            ||||  |:  ||  |||||||  
Target 5' ccTGCAATGTGGTGACACCTCCCcc 3'
553 - 577 135.00 -16.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1198819 15 ClinVar
1028890 792 ClinVar
COSN18740258 6 COSMIC
COSN6105510 63 COSMIC
COSN26744581 213 COSMIC
COSN25771571 362 COSMIC
COSN23781621 413 COSMIC
COSN17378362 489 COSMIC
COSM5018919 787 COSMIC
COSM7757665 789 COSMIC
COSM8910900 791 COSMIC
COSM7757228 792 COSMIC
COSM980918 792 COSMIC
COSM8987208 796 COSMIC
COSM980920 798 COSMIC
COSM9752418 811 COSMIC
COSM7176344 814 COSMIC
COSM5953173 824 COSMIC
COSM1479709 825 COSMIC
COSM7601700 833 COSMIC
COSM8591529 834 COSMIC
COSM7741942 837 COSMIC
COSM5095048 838 COSMIC
COSM7165634 838 COSMIC
COSM6687836 840 COSMIC
COSM9411328 840 COSMIC
COSM6687864 851 COSMIC
COSM2698833 852 COSMIC
COSM4970419 855 COSMIC
COSM6687855 866 COSMIC
COSM8797015 866 COSMIC
COSM5456630 867 COSMIC
COSM6056259 868 COSMIC
COSM6238568 871 COSMIC
COSM7702867 886 COSMIC
COSM8172911 888 COSMIC
COSM9088414 890 COSMIC
COSM5386646 901 COSMIC
COSM8809104 910 COSMIC
COSM7661608 911 COSMIC
COSM980922 915 COSMIC
COSN30665807 933 COSMIC
COSN31493203 933 COSMIC
COSN30523204 936 COSMIC
COSN30482922 979 COSMIC
COSN18741120 1023 COSMIC
COSN30498166 1060 COSMIC
COSN30109978 1071 COSMIC
COSN16414250 1226 COSMIC
COSN28645458 1282 COSMIC
COSN31534019 1331 COSMIC
COSN31543866 1387 COSMIC
COSN26569253 1735 COSMIC
COSN9670144 1797 COSMIC
COSN28871937 1808 COSMIC
COSN15668369 1836 COSMIC
COSN26442099 1877 COSMIC
COSN28191807 1943 COSMIC
COSN8603353 1983 COSMIC
COSN31958063 2066 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1473391903 1 dbSNP
rs762763548 3 dbSNP
rs1478007891 4 dbSNP
rs1046368733 6 dbSNP
rs1260726964 9 dbSNP
rs1362727937 10 dbSNP
rs770875789 14 dbSNP
rs187586850 15 dbSNP
rs1046136111 16 dbSNP
rs1164932823 17 dbSNP
rs200945844 18 dbSNP
rs767496110 21 dbSNP
rs140614661 22 dbSNP
rs1316317163 23 dbSNP
rs1325517335 28 dbSNP
rs1372625455 32 dbSNP
rs996718391 39 dbSNP
rs537255369 40 dbSNP
rs1306333580 42 dbSNP
rs1341147129 43 dbSNP
rs760907255 46 dbSNP
rs1282931081 47 dbSNP
rs764402692 50 dbSNP
rs1053309919 51 dbSNP
rs1277275413 52 dbSNP
rs893322258 54 dbSNP
rs1402598850 57 dbSNP
rs370675762 60 dbSNP
rs1011730083 61 dbSNP
rs1168054461 62 dbSNP
rs954925221 65 dbSNP
rs1008598307 66 dbSNP
rs1014593017 74 dbSNP
rs961829434 77 dbSNP
rs1022048222 78 dbSNP
rs888831054 80 dbSNP
rs1338272124 82 dbSNP
rs1271837242 86 dbSNP
rs751880156 92 dbSNP
rs1007261297 95 dbSNP
rs372987155 97 dbSNP
rs920305459 100 dbSNP
rs958579264 101 dbSNP
rs1019026401 104 dbSNP
rs1379793923 110 dbSNP
rs752058635 131 dbSNP
rs145664995 141 dbSNP
rs1436336744 142 dbSNP
rs917202165 144 dbSNP
rs571326192 147 dbSNP
rs539396072 152 dbSNP
rs1046420532 169 dbSNP
rs971966037 175 dbSNP
rs1382104223 178 dbSNP
rs1026163545 183 dbSNP
rs951882550 188 dbSNP
rs201300663 193 dbSNP
rs377428643 194 dbSNP
rs761280205 204 dbSNP
rs1291438337 206 dbSNP
rs916030773 208 dbSNP
rs1393839081 215 dbSNP
rs1310703331 219 dbSNP
rs1238392158 224 dbSNP
rs1334098080 225 dbSNP
rs1325641447 228 dbSNP
rs935297664 237 dbSNP
rs948812623 239 dbSNP
rs1422591790 240 dbSNP
rs893858470 241 dbSNP
rs1159128661 246 dbSNP
rs981489430 252 dbSNP
rs928607187 268 dbSNP
rs1469156011 271 dbSNP
rs934619214 274 dbSNP
rs996383862 276 dbSNP
rs539139288 283 dbSNP
rs1053384890 284 dbSNP
rs1200402590 288 dbSNP
rs1480527254 300 dbSNP
rs1267818981 301 dbSNP
rs1428785664 310 dbSNP
rs1308094679 323 dbSNP
rs757589632 330 dbSNP
rs1412385284 338 dbSNP
rs1051021959 345 dbSNP
rs1349186155 347 dbSNP
rs893354848 349 dbSNP
rs1234067183 360 dbSNP
rs1345117163 363 dbSNP
rs947589590 365 dbSNP
rs541735275 367 dbSNP
rs1281685184 368 dbSNP
rs1402851692 372 dbSNP
rs1340421351 382 dbSNP
rs138235186 385 dbSNP
rs1318763268 388 dbSNP
rs1399992606 389 dbSNP
rs76174824 392 dbSNP
rs1173816140 396 dbSNP
rs1469919626 408 dbSNP
rs1015146109 411 dbSNP
rs541609870 414 dbSNP
rs1007706011 421 dbSNP
rs961714549 426 dbSNP
rs1243005699 428 dbSNP
rs1192933508 433 dbSNP
rs547446168 436 dbSNP
rs1275629914 437 dbSNP
rs1281436974 441 dbSNP
rs17702032 443 dbSNP
rs111623280 445 dbSNP
rs1220653486 450 dbSNP
rs754643340 453 dbSNP
rs993083542 458 dbSNP
rs1362948568 462 dbSNP
rs1255362062 485 dbSNP
rs1270496911 487 dbSNP
rs750143447 490 dbSNP
rs1189358874 491 dbSNP
rs1336143363 493 dbSNP
rs1452689190 496 dbSNP
rs951955663 501 dbSNP
rs1404666639 518 dbSNP
rs755754811 519 dbSNP
rs1371187989 521 dbSNP
rs765962420 525 dbSNP
rs544436233 526 dbSNP
rs991371711 539 dbSNP
rs1023201266 543 dbSNP
rs753638182 544 dbSNP
rs1419791448 553 dbSNP
rs1167698334 559 dbSNP
rs536295513 560 dbSNP
rs1474667115 568 dbSNP
rs928680763 583 dbSNP
rs971164613 584 dbSNP
rs1184797914 587 dbSNP
rs1472788154 589 dbSNP
rs1461289329 592 dbSNP
rs1184137493 594 dbSNP
rs564346003 594 dbSNP
rs1200618197 598 dbSNP
rs1308232070 606 dbSNP
rs191147499 617 dbSNP
rs1213748877 618 dbSNP
rs183445123 627 dbSNP
rs754764598 628 dbSNP
rs16948664 633 dbSNP
rs528489079 637 dbSNP
rs1397189911 639 dbSNP
rs1334035548 651 dbSNP
rs935351410 654 dbSNP
rs576709603 655 dbSNP
rs368769659 659 dbSNP
rs944194518 660 dbSNP
rs1040100677 664 dbSNP
rs1444502539 670 dbSNP
rs1383930101 675 dbSNP
rs568229573 687 dbSNP
rs530980437 697 dbSNP
rs570878348 703 dbSNP
rs901565300 705 dbSNP
rs1453561388 707 dbSNP
rs757317021 712 dbSNP
rs1344645986 723 dbSNP
rs1483803535 726 dbSNP
rs550788105 727 dbSNP
rs757611909 729 dbSNP
rs1423900316 732 dbSNP
rs898057920 738 dbSNP
rs1224949249 739 dbSNP
rs779462913 746 dbSNP
rs781323996 748 dbSNP
rs56377302 755 dbSNP
rs570792852 757 dbSNP
rs780865641 759 dbSNP
rs1372214337 760 dbSNP
rs747758147 762 dbSNP
rs373467006 763 dbSNP
rs562407766 764 dbSNP
rs749092639 772 dbSNP
rs201407665 774 dbSNP
rs774274614 775 dbSNP
rs78434961 777 dbSNP
rs1229815140 778 dbSNP
rs1300216359 779 dbSNP
rs1340481129 782 dbSNP
rs1420236492 785 dbSNP
rs1224716233 790 dbSNP
rs146403036 791 dbSNP
rs139083066 792 dbSNP
rs1479089963 793 dbSNP
rs149890427 795 dbSNP
rs764280092 796 dbSNP
rs754066272 797 dbSNP
rs1189144159 798 dbSNP
rs762235699 801 dbSNP
rs765525653 805 dbSNP
rs970314414 807 dbSNP
rs1169565592 812 dbSNP
rs1378391002 814 dbSNP
rs770152853 815 dbSNP
rs376978425 826 dbSNP
rs780812895 827 dbSNP
rs752227368 831 dbSNP
rs755739947 833 dbSNP
rs777559611 834 dbSNP
rs748894708 835 dbSNP
rs757016367 839 dbSNP
rs144922409 840 dbSNP
rs745776474 842 dbSNP
rs1297689272 845 dbSNP
rs555469830 851 dbSNP
rs200123319 852 dbSNP
rs1208874040 856 dbSNP
rs369580507 857 dbSNP
rs1384143556 858 dbSNP
rs988850991 860 dbSNP
rs1454708422 863 dbSNP
rs776848685 864 dbSNP
rs756259623 865 dbSNP
rs761956618 866 dbSNP
rs1157005153 868 dbSNP
rs778106113 872 dbSNP
rs200402571 873 dbSNP
rs773484423 877 dbSNP
rs914560759 878 dbSNP
rs969027996 888 dbSNP
rs373731525 893 dbSNP
rs149061589 896 dbSNP
rs1343930328 899 dbSNP
rs752176009 900 dbSNP
rs755614897 905 dbSNP
rs763708067 910 dbSNP
rs1188062691 912 dbSNP
rs753479348 914 dbSNP
rs1280959910 918 dbSNP
rs1344556545 919 dbSNP
rs1213020777 921 dbSNP
rs756888856 922 dbSNP
rs1269524841 923 dbSNP
rs778666178 925 dbSNP
rs745628533 928 dbSNP
rs758248243 931 dbSNP
rs377598451 932 dbSNP
rs142148059 933 dbSNP
rs1268437644 934 dbSNP
rs1298094262 935 dbSNP
rs1473062988 938 dbSNP
rs1041186871 940 dbSNP
rs1184379285 941 dbSNP
rs1383190637 947 dbSNP
rs749364744 948 dbSNP
rs776598172 950 dbSNP
rs749700208 952 dbSNP
rs1352177631 953 dbSNP
rs1287677619 954 dbSNP
rs371189836 955 dbSNP
rs1484639528 958 dbSNP
rs1175829076 963 dbSNP
rs929039299 965 dbSNP
rs1187758284 968 dbSNP
rs1375008118 974 dbSNP
rs915227795 981 dbSNP
rs769879018 982 dbSNP
rs111406341 985 dbSNP
rs1260932233 986 dbSNP
rs769045230 993 dbSNP
rs1462615124 996 dbSNP
rs1487292634 997 dbSNP
rs1243157448 1006 dbSNP
rs986221935 1008 dbSNP
rs1459694017 1021 dbSNP
rs540108856 1025 dbSNP
rs1044708606 1027 dbSNP
rs768273689 1029 dbSNP
rs1307322861 1036 dbSNP
rs1293920441 1051 dbSNP
rs1248749402 1052 dbSNP
rs1384204869 1057 dbSNP
rs1002742740 1062 dbSNP
rs1450627072 1063 dbSNP
rs911951694 1071 dbSNP
rs143201722 1072 dbSNP
rs944875508 1073 dbSNP
rs1036515606 1079 dbSNP
rs1372238528 1083 dbSNP
rs1166497099 1089 dbSNP
rs1179113025 1109 dbSNP
rs528441163 1118 dbSNP
rs1163204773 1119 dbSNP
rs898112280 1124 dbSNP
rs930888435 1133 dbSNP
rs891910478 1135 dbSNP
rs374403365 1136 dbSNP
rs185004383 1138 dbSNP
rs530943927 1139 dbSNP
rs1012555883 1144 dbSNP
rs1024026641 1145 dbSNP
rs985441525 1151 dbSNP
rs1018975242 1153 dbSNP
rs965653894 1157 dbSNP
rs976911926 1159 dbSNP
rs148272574 1171 dbSNP
rs114760470 1173 dbSNP
rs115727254 1174 dbSNP
rs116048089 1176 dbSNP
rs908922971 1186 dbSNP
rs1286574028 1187 dbSNP
rs1394612331 1194 dbSNP
rs1349790599 1200 dbSNP
rs567171975 1202 dbSNP
rs1228990565 1206 dbSNP
rs367903198 1208 dbSNP
rs1028209433 1209 dbSNP
rs1269955216 1210 dbSNP
rs774762738 1216 dbSNP
rs62060012 1220 dbSNP
rs144830874 1222 dbSNP
rs112898874 1225 dbSNP
rs192690149 1226 dbSNP
rs972263411 1228 dbSNP
rs141286743 1229 dbSNP
rs1291653033 1239 dbSNP
rs1220840968 1247 dbSNP
rs1057019437 1248 dbSNP
rs147407544 1249 dbSNP
rs557981640 1253 dbSNP
rs1334187674 1272 dbSNP
rs1285479517 1274 dbSNP
rs3744538 1282 dbSNP
rs1022133620 1283 dbSNP
rs904597475 1293 dbSNP
rs1403481648 1296 dbSNP
rs1387060259 1298 dbSNP
rs1158639609 1308 dbSNP
rs772725782 1312 dbSNP
rs138068637 1314 dbSNP
rs998560304 1317 dbSNP
rs1350652964 1321 dbSNP
rs1268552795 1335 dbSNP
rs1197203550 1341 dbSNP
rs1052764750 1345 dbSNP
rs374685432 1354 dbSNP
rs1018255630 1370 dbSNP
rs1412034648 1379 dbSNP
rs965627796 1380 dbSNP
rs1327207788 1384 dbSNP
rs1265109841 1385 dbSNP
rs1224301721 1387 dbSNP
rs1323112307 1394 dbSNP
rs553754630 1396 dbSNP
rs1369962906 1398 dbSNP
rs976985506 1399 dbSNP
rs3207257 1402 dbSNP
rs1011382903 1403 dbSNP
rs951552257 1404 dbSNP
rs3207258 1407 dbSNP
rs3207259 1409 dbSNP
rs1469934442 1411 dbSNP
rs3169779 1416 dbSNP
rs984272735 1418 dbSNP
rs1301638013 1419 dbSNP
rs573905681 1423 dbSNP
rs1313250464 1433 dbSNP
rs1476619691 1442 dbSNP
rs541804138 1444 dbSNP
rs941788343 1455 dbSNP
rs1193048758 1460 dbSNP
rs552126684 1461 dbSNP
rs184580419 1462 dbSNP
rs143547737 1469 dbSNP
rs766054462 1470 dbSNP
rs1341260898 1473 dbSNP
rs1298060942 1474 dbSNP
rs1206706085 1475 dbSNP
rs534759131 1480 dbSNP
rs1362948312 1481 dbSNP
rs945895432 1482 dbSNP
rs1042890928 1484 dbSNP
rs147157543 1486 dbSNP
rs1006961842 1487 dbSNP
rs1040163503 1491 dbSNP
rs545094528 1492 dbSNP
rs1387708761 1503 dbSNP
rs533332742 1506 dbSNP
rs1025860490 1514 dbSNP
rs1235914518 1515 dbSNP
rs1206844019 1516 dbSNP
rs919316868 1527 dbSNP
rs1273363714 1528 dbSNP
rs1204260547 1530 dbSNP
rs547195216 1533 dbSNP
rs560603273 1537 dbSNP
rs1389809239 1538 dbSNP
rs1377756287 1540 dbSNP
rs114060466 1548 dbSNP
rs963489070 1564 dbSNP
rs1443848382 1566 dbSNP
rs560241842 1567 dbSNP
rs948966695 1569 dbSNP
rs1328601876 1585 dbSNP
rs534598571 1586 dbSNP
rs80321467 1592 dbSNP
rs140332297 1593 dbSNP
rs75975416 1594 dbSNP
rs1179043230 1595 dbSNP
rs1220258564 1596 dbSNP
rs1380991320 1597 dbSNP
rs1232580604 1598 dbSNP
rs2078864 1600 dbSNP
rs913189901 1601 dbSNP
rs1049570376 1605 dbSNP
rs1296351003 1625 dbSNP
rs1293705653 1628 dbSNP
rs889739097 1630 dbSNP
rs945926721 1631 dbSNP
rs188103793 1636 dbSNP
rs1225038693 1637 dbSNP
rs1275973869 1649 dbSNP
rs925821076 1662 dbSNP
rs1062484 1664 dbSNP
rs1039793638 1666 dbSNP
rs553965341 1667 dbSNP
rs9909341 1668 dbSNP
rs180727812 1669 dbSNP
rs1436318116 1690 dbSNP
rs952148527 1691 dbSNP
rs1247610948 1696 dbSNP
rs1401408500 1700 dbSNP
rs1407492608 1701 dbSNP
rs1157160270 1703 dbSNP
rs1450398432 1704 dbSNP
rs867305270 1714 dbSNP
rs1226857973 1723 dbSNP
rs556040474 1732 dbSNP
rs985397415 1736 dbSNP
rs1488115905 1737 dbSNP
rs1169714225 1738 dbSNP
rs1244972639 1746 dbSNP
rs887385211 1750 dbSNP
rs777794627 1751 dbSNP
rs560850771 1757 dbSNP
rs1266974840 1760 dbSNP
rs1017577262 1761 dbSNP
rs1226138859 1763 dbSNP
rs1325261028 1766 dbSNP
rs1176655456 1772 dbSNP
rs981668584 1774 dbSNP
rs770890772 1775 dbSNP
rs138312887 1777 dbSNP
rs934348691 1780 dbSNP
rs1432603303 1796 dbSNP
rs988479335 1798 dbSNP
rs1002747295 1799 dbSNP
rs914336845 1807 dbSNP
rs1280746522 1808 dbSNP
rs773536094 1821 dbSNP
rs1223083096 1826 dbSNP
rs1262041559 1830 dbSNP
rs1313325896 1836 dbSNP
rs763401787 1841 dbSNP
rs1219935861 1843 dbSNP
rs1034132090 1847 dbSNP
rs184785077 1848 dbSNP
rs1483483712 1849 dbSNP
rs1422856050 1850 dbSNP
rs1207569940 1855 dbSNP
rs1231194250 1861 dbSNP
rs1206288487 1864 dbSNP
rs189151821 1866 dbSNP
rs564397641 1867 dbSNP
rs1416551918 1870 dbSNP
rs1443381952 1871 dbSNP
rs1163282450 1872 dbSNP
rs1391200496 1874 dbSNP
rs1425848287 1875 dbSNP
rs36103008 1877 dbSNP
rs540455586 1878 dbSNP
rs1359175798 1880 dbSNP
rs1352456383 1883 dbSNP
rs763617149 1885 dbSNP
rs1302958711 1887 dbSNP
rs943821940 1897 dbSNP
rs1040999155 1900 dbSNP
rs1042358 1901 dbSNP
rs1314027689 1902 dbSNP
rs967419071 1908 dbSNP
rs1342630096 1910 dbSNP
rs1216173361 1913 dbSNP
rs1271141717 1920 dbSNP
rs1062541 1921 dbSNP
rs1062542 1923 dbSNP
rs1454704287 1924 dbSNP
rs978718767 1928 dbSNP
rs1245064111 1933 dbSNP
rs993934575 1934 dbSNP
rs1460339447 1936 dbSNP
rs1183522491 1941 dbSNP
rs1302532746 1942 dbSNP
rs549772790 1943 dbSNP
rs1451697587 1947 dbSNP
rs942556915 1949 dbSNP
rs756840406 1951 dbSNP
rs1409058260 1953 dbSNP
rs1186096215 1962 dbSNP
rs1006309624 1963 dbSNP
rs1312688230 1968 dbSNP
rs1176110757 1971 dbSNP
rs975209399 1973 dbSNP
rs764784003 1993 dbSNP
rs1450289642 2001 dbSNP
rs77335124 2007 dbSNP
rs750143376 2012 dbSNP
rs934059677 2013 dbSNP
rs1047082843 2016 dbSNP
rs1268250875 2017 dbSNP
rs1248227320 2024 dbSNP
rs953695332 2029 dbSNP
rs560779676 2035 dbSNP
rs1383564647 2036 dbSNP
rs117636029 2040 dbSNP
rs181578395 2044 dbSNP
rs1375810465 2054 dbSNP
rs941337917 2056 dbSNP
rs774764500 2058 dbSNP
rs549651988 2060 dbSNP
rs1431307098 2084 dbSNP
rs1038621927 2085 dbSNP
rs1369836955 2091 dbSNP
rs1166593528 2095 dbSNP
rs1158126365 2096 dbSNP
rs1488039161 2110 dbSNP
rs1186230359 2114 dbSNP
rs905432570 2118 dbSNP
rs186717145 2119 dbSNP
rs1482957368 2120 dbSNP
rs981553966 2121 dbSNP
rs1035928112 2122 dbSNP
rs1330202187 2127 dbSNP
rs1002412920 2136 dbSNP
rs1242790107 2138 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            | |  |||  :||||||| 
Target 5' ccUCCUACCUCAGCCUCCCAa 3'
7 - 27
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293/HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1067870. RNA binding protein: AGO2. Condition:Ago2 IP-seq (mitotic cells) ...

- Kishore S; Gruber AR; Jedlinski DJ; Syed et al., 2013, Genome biology.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            | |  |||  :||||||| 
Target 5' ccUCCUACCUCAGCCUCCCAa 3'
10 - 30
Article - Kishore S; Gruber AR; Jedlinski DJ; Syed et al.
- Genome biology, 2013
BACKGROUND: In recent years, a variety of small RNAs derived from other RNAs with well-known functions such as tRNAs and snoRNAs, have been identified. The functional relevance of these RNAs is largely unknown. To gain insight into the complexity of snoRNA processing and the functional relevance of snoRNA-derived small RNAs, we sequence long and short RNAs, small RNAs that co-precipitate with the Argonaute 2 protein and RNA fragments obtained in photoreactive nucleotide-enhanced crosslinking and immunoprecipitation (PAR-CLIP) of core snoRNA-associated proteins. RESULTS: Analysis of these data sets reveals that many loci in the human genome reproducibly give rise to C/D box-like snoRNAs, whose expression and evolutionary conservation are typically less pronounced relative to the snoRNAs that are currently cataloged. We further find that virtually all C/D box snoRNAs are specifically processed inside the regions of terminal complementarity, retaining in the mature form only 4-5 nucleotides upstream of the C box and 2-5 nucleotides downstream of the D box. Sequencing of the total and Argonaute 2-associated populations of small RNAs reveals that despite their cellular abundance, C/D box-derived small RNAs are not efficiently incorporated into the Ago2 protein. CONCLUSIONS: We conclude that the human genome encodes a large number of snoRNAs that are processed along the canonical pathway and expressed at relatively low levels. Generation of snoRNA-derived processing products with alternative, particularly miRNA-like, functions appears to be uncommon.
LinkOut: [PMID: 23706177]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000007722.7 | 3UTR | AGCAAUCCUCCUACCUCAGCCUCCCAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1067870
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293/HeLa / Ago2 IP-seq (mitotic cells)
Location of target site ENST00000007722.7 | 3UTR | UCAAGCAAUCCUCCUACCUCAGCCUCCCAAAGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23706177 / GSE43666
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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