pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol A1BG   
Synonyms A1B, ABG, GAB, HYST2477
Description alpha-1-B glycoprotein
Transcript NM_130786   
Expression
Putative miRNA Targets on A1BG
3'UTR of A1BG
(miRNA target sites are highlighted)
>A1BG|NM_130786|3'UTR
   1 TGCAGCCGCGGGCCCAGGGTGCTGTTGGTGTCCTCAGAAGTGCCGGGGATTCTGGACTGGCTCCCTCCCCTCCTGTTGCA
  81 GCACAAGGCCGGGGTCTCTGGGGGGCTGGAGAAGCCTCCCTCATTCCTCCCAGGAATTAATAAATGTGAAGAGAGGCTCT
 161 GTTTAAAATGTCTTTGGACTCCCAGGGCTGAGTGGGCTGGGATCTCGTGTCCTCAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucgguCGGUUGAGU-GUCACGUCu 5'
               |:|  ||||  ||||| | 
Target 5' ttggtGTC--CTCAGAAGTGCCGg 3'
25 - 46 118.00 -11.30
2
miRNA  3' ucGGUCGGUUGAGUGUCACGUCu 5'
            ||  ||  ||| :: ||||| 
Target 5' tcCCTCCC--CTCCTGTTGCAGc 3'
62 - 82 109.00 -13.20
3
miRNA  3' ucggucggUUGAGUGUCACGUCu 5'
                  :|||| ||| || | 
Target 5' tgtctttgGACTCCCAGGGCTGa 3'
169 - 191 99.00 -14.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN24315349 8 COSMIC
COSN31500406 8 COSMIC
COSN30190995 11 COSMIC
COSN30133625 37 COSMIC
COSN30181375 37 COSMIC
COSN15079388 40 COSMIC
COSN30149314 52 COSMIC
COSN17076277 61 COSMIC
COSN30551695 73 COSMIC
COSN30169836 96 COSMIC
COSN30142661 114 COSMIC
COSN30467034 126 COSMIC
COSN30123253 141 COSMIC
COSN30136715 143 COSMIC
COSN30107159 144 COSMIC
COSN20116174 155 COSMIC
COSN30184091 172 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1240913987 1 dbSNP
rs1483412749 3 dbSNP
rs757346192 4 dbSNP
rs1488306318 7 dbSNP
rs1245724448 8 dbSNP
rs200870181 11 dbSNP
rs1208207331 13 dbSNP
rs764342582 18 dbSNP
rs369421999 21 dbSNP
rs753125623 22 dbSNP
rs765524646 23 dbSNP
rs1246765337 24 dbSNP
rs1338919804 25 dbSNP
rs760105773 25 dbSNP
rs1400571365 29 dbSNP
rs777113256 33 dbSNP
rs1312370811 34 dbSNP
rs765925878 35 dbSNP
rs1377576625 36 dbSNP
rs529512912 37 dbSNP
rs200801249 40 dbSNP
rs772558287 41 dbSNP
rs1277696407 44 dbSNP
rs1434492327 45 dbSNP
rs764893172 46 dbSNP
rs1417846384 47 dbSNP
rs376165835 48 dbSNP
rs1047461 52 dbSNP
rs570220357 55 dbSNP
rs955393076 62 dbSNP
rs550459885 66 dbSNP
rs996930699 68 dbSNP
rs533320081 70 dbSNP
rs1205224065 73 dbSNP
rs1022566101 74 dbSNP
rs1464121085 90 dbSNP
rs367914795 91 dbSNP
rs1243272067 98 dbSNP
rs892648783 104 dbSNP
rs1189967081 109 dbSNP
rs758148429 119 dbSNP
rs1424967130 133 dbSNP
rs1288776573 138 dbSNP
rs202132547 150 dbSNP
rs3214663 157 dbSNP
rs398035147 157 dbSNP
rs200495425 158 dbSNP
rs1003004716 168 dbSNP
rs143231321 170 dbSNP
rs886974307 172 dbSNP
rs1487874031 174 dbSNP
rs1045671688 178 dbSNP
rs1347027635 181 dbSNP
rs1285826686 192 dbSNP
rs1448659364 194 dbSNP
rs949957673 205 dbSNP
rs764049641 209 dbSNP
rs1225145010 214 dbSNP
rs1286158233 230 dbSNP
rs569456527 233 dbSNP
rs1358109804 236 dbSNP
rs915820196 245 dbSNP
rs371190941 252 dbSNP
rs1055111938 256 dbSNP
rs760677280 258 dbSNP
rs1458508564 259 dbSNP
rs1220056611 266 dbSNP
rs1012551906 268 dbSNP
rs1388862906 273 dbSNP
rs1160372752 290 dbSNP
rs1202048063 297 dbSNP
rs1410207681 297 dbSNP
rs1472434963 298 dbSNP
rs1406224536 299 dbSNP
rs1159342676 302 dbSNP
rs1410305796 306 dbSNP
rs898406180 312 dbSNP
rs1366133338 316 dbSNP
rs1184180605 318 dbSNP
rs748401050 322 dbSNP
rs1280802384 323 dbSNP
rs1038275863 324 dbSNP
rs527773864 326 dbSNP
rs562231049 328 dbSNP
rs908406490 331 dbSNP
rs1239383894 332 dbSNP
rs757199443 342 dbSNP
rs188176488 352 dbSNP
rs555960802 353 dbSNP
rs1227265510 354 dbSNP
rs966847499 358 dbSNP
rs1225351028 363 dbSNP
rs921367025 374 dbSNP
rs573786757 385 dbSNP
rs556927137 387 dbSNP
rs975382262 388 dbSNP
rs1314974584 391 dbSNP
rs774320309 394 dbSNP
rs914032571 410 dbSNP
rs1291716010 420 dbSNP
rs1162747245 423 dbSNP
rs1228865898 430 dbSNP
rs968067571 436 dbSNP
rs373550936 437 dbSNP
rs915477008 440 dbSNP
rs771122166 441 dbSNP
rs879109372 442 dbSNP
rs183853818 443 dbSNP
rs996506381 446 dbSNP
rs577554745 447 dbSNP
rs1016684942 457 dbSNP
rs1273140065 459 dbSNP
rs1451172147 464 dbSNP
rs1196755509 467 dbSNP
rs1275478745 469 dbSNP
rs557315765 472 dbSNP
rs1183214679 473 dbSNP
rs971094726 475 dbSNP
rs1004001857 477 dbSNP
rs1343844450 482 dbSNP
rs1167323065 483 dbSNP
rs886857985 486 dbSNP
rs1372454077 494 dbSNP
rs1012519298 496 dbSNP
rs1169499357 497 dbSNP
rs534344307 503 dbSNP
rs149146289 505 dbSNP
rs377721740 511 dbSNP
rs370922558 526 dbSNP
rs1384488282 533 dbSNP
rs1432287095 535 dbSNP
rs887033735 536 dbSNP
rs1051348282 538 dbSNP
rs1228793340 543 dbSNP
rs1272350852 550 dbSNP
rs1343290104 560 dbSNP
rs555456448 564 dbSNP
rs1203323217 566 dbSNP
rs1264025963 582 dbSNP
rs1462786795 583 dbSNP
rs938021323 585 dbSNP
rs933852144 587 dbSNP
rs1485001054 588 dbSNP
rs1429107418 595 dbSNP
rs1195209508 600 dbSNP
rs1248262546 600 dbSNP
rs1221976171 601 dbSNP
rs925328547 614 dbSNP
rs535634768 619 dbSNP
rs1289432576 624 dbSNP
rs945429965 630 dbSNP
rs1407858371 631 dbSNP
rs1455253805 632 dbSNP
rs1319386388 638 dbSNP
rs570236282 640 dbSNP
rs946695400 641 dbSNP
rs1383322769 642 dbSNP
rs1298335287 646 dbSNP
rs1329818327 651 dbSNP
rs915277657 655 dbSNP
rs35270399 657 dbSNP
rs1342340702 658 dbSNP
rs550155566 660 dbSNP
rs1486216822 661 dbSNP
rs1206929622 662 dbSNP
rs1265207802 663 dbSNP
rs1490148573 665 dbSNP
rs986964458 678 dbSNP
rs1369228243 679 dbSNP
rs1471441782 688 dbSNP
rs778094723 689 dbSNP
rs1363921192 694 dbSNP
rs921511951 695 dbSNP
rs1291242458 696 dbSNP
rs770083534 711 dbSNP
rs533660443 713 dbSNP
rs181803254 721 dbSNP
rs1304202536 722 dbSNP
rs1016568767 725 dbSNP
rs1408274606 729 dbSNP
rs1306598538 731 dbSNP
rs1003887440 732 dbSNP
rs951079792 734 dbSNP
rs1162289649 739 dbSNP
rs768837629 744 dbSNP
rs1358722335 753 dbSNP
rs1223121851 756 dbSNP
rs1270847303 760 dbSNP
rs748461483 762 dbSNP
rs1014076777 765 dbSNP
rs1167982112 767 dbSNP
rs1176374640 780 dbSNP
rs147693301 782 dbSNP
rs1034270617 784 dbSNP
rs1427445504 788 dbSNP
rs1191570169 790 dbSNP
rs1016970960 791 dbSNP
rs1003900819 802 dbSNP
rs189482425 803 dbSNP
rs781695187 806 dbSNP
rs1043679412 807 dbSNP
rs145404267 813 dbSNP
rs1164739986 816 dbSNP
rs1367957119 817 dbSNP
rs1483329515 825 dbSNP
rs869164537 827 dbSNP
rs11405407 829 dbSNP
rs397762419 829 dbSNP
rs892531301 829 dbSNP
rs1224564978 834 dbSNP
rs1313597741 846 dbSNP
rs1301470019 847 dbSNP
rs548663806 851 dbSNP
rs1382102902 852 dbSNP
rs1246679773 855 dbSNP
rs934167717 862 dbSNP
rs1301649971 863 dbSNP
rs531757805 864 dbSNP
rs921471985 874 dbSNP
rs899704902 877 dbSNP
rs749925746 880 dbSNP
rs563488175 896 dbSNP
rs1242030389 899 dbSNP
rs1444749397 907 dbSNP
rs1371665673 910 dbSNP
rs1297683935 918 dbSNP
rs946747790 921 dbSNP
rs893916083 932 dbSNP
rs910146713 943 dbSNP
rs376030034 944 dbSNP
rs1463769850 946 dbSNP
rs951056914 948 dbSNP
rs1177143838 953 dbSNP
rs62116374 958 dbSNP
rs1024052581 961 dbSNP
rs935376688 974 dbSNP
rs1405576904 977 dbSNP
rs1427004450 979 dbSNP
rs756967765 981 dbSNP
rs993027651 982 dbSNP
rs139979497 987 dbSNP
rs1213916634 996 dbSNP
rs79771427 997 dbSNP
rs1276935035 998 dbSNP
rs1309005950 1003 dbSNP
rs1207707955 1013 dbSNP
rs1262142367 1017 dbSNP
rs1034563768 1035 dbSNP
rs1193589283 1047 dbSNP
rs916713992 1049 dbSNP
rs1256073418 1050 dbSNP
rs1474744209 1051 dbSNP
rs564061884 1052 dbSNP
rs755905988 1058 dbSNP
rs962411839 1059 dbSNP
rs1016697437 1060 dbSNP
rs904426537 1065 dbSNP
rs540589525 1066 dbSNP
rs1281803006 1071 dbSNP
rs1338862088 1075 dbSNP
rs1343495180 1077 dbSNP
rs773766170 1081 dbSNP
rs892500180 1082 dbSNP
rs998135097 1085 dbSNP
rs1221475184 1088 dbSNP
rs767444200 1090 dbSNP
rs1306984449 1099 dbSNP
rs1018098714 1103 dbSNP
rs934029678 1108 dbSNP
rs899919537 1111 dbSNP
rs1040245444 1116 dbSNP
rs1010759063 1118 dbSNP
rs941526989 1130 dbSNP
rs910123371 1131 dbSNP
rs1197721743 1133 dbSNP
rs572018113 1137 dbSNP
rs1480920029 1141 dbSNP
rs1178826100 1142 dbSNP
rs1161111899 1147 dbSNP
rs555123343 1148 dbSNP
rs1363000713 1149 dbSNP
rs1179663821 1159 dbSNP
rs1159846808 1173 dbSNP
rs373469507 1175 dbSNP
rs1346899073 1176 dbSNP
rs1403019633 1186 dbSNP
rs535534301 1191 dbSNP
rs1406429249 1194 dbSNP
rs916848079 1199 dbSNP
rs1349447721 1211 dbSNP
rs992514387 1212 dbSNP
rs958672210 1214 dbSNP
rs576099617 1223 dbSNP
rs973511848 1224 dbSNP
rs1034121904 1227 dbSNP
rs568078244 1228 dbSNP
rs1268685923 1231 dbSNP
rs556783367 1232 dbSNP
rs1490607104 1242 dbSNP
rs1201979255 1248 dbSNP
rs982590122 1248 dbSNP
rs978547820 1251 dbSNP
rs1469758066 1254 dbSNP
rs1265956 1257 dbSNP
rs1410230463 1261 dbSNP
rs1422719946 1266 dbSNP
rs1020149282 1274 dbSNP
rs922257658 1276 dbSNP
rs1459702228 1290 dbSNP
rs976416367 1292 dbSNP
rs1326547494 1293 dbSNP
rs1334812350 1301 dbSNP
rs1269561605 1306 dbSNP
rs1208950250 1307 dbSNP
rs1010147523 1308 dbSNP
rs1280842019 1311 dbSNP
rs763030911 1312 dbSNP
rs1291718764 1313 dbSNP
rs1360720417 1316 dbSNP
rs1212009419 1321 dbSNP
rs1260471698 1327 dbSNP
rs963929941 1336 dbSNP
rs529609430 1347 dbSNP
rs1182767847 1378 dbSNP
rs1018234909 1381 dbSNP
rs1401794119 1393 dbSNP
rs1030040414 1394 dbSNP
rs1183015225 1397 dbSNP
rs549603693 1398 dbSNP
rs796334749 1402 dbSNP
rs773352533 1404 dbSNP
rs571122546 1413 dbSNP
rs888658136 1419 dbSNP
rs999583157 1423 dbSNP
rs1313571751 1425 dbSNP
rs1047265178 1426 dbSNP
rs1380875113 1431 dbSNP
rs1410232564 1433 dbSNP
rs1330438962 1438 dbSNP
rs930179901 1444 dbSNP
rs1046357581 1446 dbSNP
rs1436088796 1447 dbSNP
rs1012215014 1453 dbSNP
rs1268834475 1459 dbSNP
rs1384029414 1467 dbSNP
rs917521596 1468 dbSNP
rs575442841 1475 dbSNP
rs1057178613 1480 dbSNP
rs1196704539 1481 dbSNP
rs1156537646 1494 dbSNP
rs895389594 1496 dbSNP
rs1037940386 1502 dbSNP
rs879803007 1525 dbSNP
rs1444122147 1529 dbSNP
rs908066526 1533 dbSNP
rs1048368699 1543 dbSNP
rs1475637414 1547 dbSNP
rs1172477615 1551 dbSNP
rs929701135 1563 dbSNP
rs927023502 1566 dbSNP
rs978514804 1567 dbSNP
rs1265955 1576 dbSNP
rs1407624725 1578 dbSNP
rs1398343283 1579 dbSNP
rs533892383 1583 dbSNP
rs777206281 1587 dbSNP
rs568437296 1588 dbSNP
rs12461107 1590 dbSNP
rs954756357 1594 dbSNP
rs1359083267 1595 dbSNP
rs1321761602 1600 dbSNP
rs1266490774 1603 dbSNP
rs989431338 1620 dbSNP
rs768569433 1623 dbSNP
rs1203426346 1624 dbSNP
rs1260986924 1625 dbSNP
rs1447442954 1626 dbSNP
rs958203233 1631 dbSNP
rs139969540 1632 dbSNP
rs776908985 1633 dbSNP
rs1436159733 1638 dbSNP
rs970807522 1640 dbSNP
rs1316003479 1654 dbSNP
rs1378958519 1656 dbSNP
rs529745879 1657 dbSNP
rs1388248298 1663 dbSNP
rs562869520 1671 dbSNP
rs1302518315 1680 dbSNP
rs549536475 1694 dbSNP
rs772329796 1698 dbSNP
rs1300499743 1712 dbSNP
rs1383268890 1712 dbSNP
rs532977317 1716 dbSNP
rs564000321 1717 dbSNP
rs185749150 1718 dbSNP
rs1391543365 1740 dbSNP
rs1168606738 1744 dbSNP
rs1474879767 1745 dbSNP
rs1005602582 1746 dbSNP
rs1236977084 1753 dbSNP
rs1260212843 1753 dbSNP
rs1006437101 1754 dbSNP
rs374809224 1757 dbSNP
rs557360509 1757 dbSNP
rs193104599 1761 dbSNP
rs1047865813 1762 dbSNP
rs1269034259 1763 dbSNP
rs1416873375 1780 dbSNP
rs1180558611 1781 dbSNP
rs745650668 1781 dbSNP
rs1420891207 1788 dbSNP
rs561716350 1792 dbSNP
rs1047233139 1797 dbSNP
rs994365446 1810 dbSNP
rs1424447693 1823 dbSNP
rs1294429571 1829 dbSNP
rs1370087284 1830 dbSNP
rs896039236 1840 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293/HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1067869. RNA binding protein: AGO2. Condition:Ago2 IP-seq (asynchronous cells) ...

- Kishore S; Gruber AR; Jedlinski DJ; Syed et al., 2013, Genome biology.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ucGGUCGGUUGAGUGUCACGUCu 5'
            :|| |||:  :: ||||||| 
Target 5' --UCACCCAGGCUGGAGUGCAGu 3'
1 - 21
Article - Kishore S; Gruber AR; Jedlinski DJ; Syed et al.
- Genome biology, 2013
BACKGROUND: In recent years, a variety of small RNAs derived from other RNAs with well-known functions such as tRNAs and snoRNAs, have been identified. The functional relevance of these RNAs is largely unknown. To gain insight into the complexity of snoRNA processing and the functional relevance of snoRNA-derived small RNAs, we sequence long and short RNAs, small RNAs that co-precipitate with the Argonaute 2 protein and RNA fragments obtained in photoreactive nucleotide-enhanced crosslinking and immunoprecipitation (PAR-CLIP) of core snoRNA-associated proteins. RESULTS: Analysis of these data sets reveals that many loci in the human genome reproducibly give rise to C/D box-like snoRNAs, whose expression and evolutionary conservation are typically less pronounced relative to the snoRNAs that are currently cataloged. We further find that virtually all C/D box snoRNAs are specifically processed inside the regions of terminal complementarity, retaining in the mature form only 4-5 nucleotides upstream of the C box and 2-5 nucleotides downstream of the D box. Sequencing of the total and Argonaute 2-associated populations of small RNAs reveals that despite their cellular abundance, C/D box-derived small RNAs are not efficiently incorporated into the Ago2 protein. CONCLUSIONS: We conclude that the human genome encodes a large number of snoRNAs that are processed along the canonical pathway and expressed at relatively low levels. Generation of snoRNA-derived processing products with alternative, particularly miRNA-like, functions appears to be uncommon.
LinkOut: [PMID: 23706177]
CLIP-seq Support 1 for dataset GSM1067869
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293/HeLa / Ago2 IP-seq (asynchronous cells)
Location of target site ENST00000263100.3 | 3UTR | UCACCCAGGCUGGAGUGCAGUGUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23706177 / GSE43666
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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