pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol GSTCD   
Synonyms -
Description glutathione S-transferase C-terminal domain containing
Transcript NM_001031720   
Other Transcripts NM_024751   
Expression
Putative miRNA Targets on GSTCD
3'UTR of GSTCD
(miRNA target sites are highlighted)
>GSTCD|NM_001031720|3'UTR
   1 AATGAGATATTCACATTTGATATTTTGCCATCCGTCTTCACGTTGGATGCCCAGTGGCATTCAGGAGGTTCTTGGCATAA
  81 CTAGGAAACAGCATTAGCCATCTTGAACCTATTGTGCTCAGGAAGGAAAGCAACAGGGAAATCTTGGAAGTAAAGGCTCC
 161 CTGCAAAGCATCACAAATGCTTTACAATGTGTGATTAAAGGACTGCTGGTTTTTATAGTGAGAATCCCCTGAAGTCTCAG
 241 CTGCCAAAAGAATAATACTAGTGGAGGTTCCATCACAGGAATAACAATTTCCTTCTCACTTCACAAGCTCCTCTGATCTT
 321 GCCAATGTGATGTTTAATTCAAAACAGCGCACTTACAGCCTTTATTTTATACTTATTTAGATATTCACATGGGAACTGAA
 401 AGTAGACTCAGTGGAGTTTTTTGTTTTTTATATTTTTAACAATTGTACTTTTTCTATCACTTTAAAAAAATCTAGTCAGG
 481 TAATTATAGTACAGTTATTTTTAAGCTGGGGTTAGTTGAACTTGTATAGCATTTAATATACTCCTTTTAAATATATTTCT
 561 GCCAGGCATGGTGGCTCATGCCTATAATCCCAGCACTTTGAGAGGCCAAGGTGGGAGGATCATTTGAGCCCAGGATATCG
 641 AGACCAGCCTGCACTACAAAAAAATCCAAAAAATGAGGTGGGAGGATCACTTGAGCCCAGGAAGTCAAGGCTGCAGTGAG
 721 CCTTGATAGCGCCACTGCACTCCTGCCTGGGAAAATGAGACCCAGACTCAAAATAAATCAATGAATGAATTAATAAACAA
 801 ATAAATAAATAAATAAATTTCCCATAAATTACCAAATGAGATTGTCACTGGTTCAAATTATTAAATAATTGCCATAAATT
 881 TCCTATTACGGGAATGTGGAATTTGGACATACATTTTAACAATAAGTACATTGATTAATACATTTAAGTTTATAAGTAAT
 961 TATTGAGGATCCAGTATTTTCAAGACCTTGGCCTAGTTTCTTTTCAATTCAAAGATGAGTTGCAAAAGACATAATGTTTT
1041 GCCTATGGAAGTAGATCATCTAGAAGAAAAAGATTAAAGAATTAGTTAAGCTTTTTTTTTTTTTTTTTTTTGAGACAGAG
1121 TTTCACTCTTGTTGCCCAGGCTGGAATTCAGTGGCTCGATCTTGGCTCACCACAACCTCTGCATTCTCCTGCCTCAGCCT
1201 CCCGAGTAGCTAGGATTATAGGCACCTGCCACCATGCCCGGCTAATTTTGTTTGTAATTTTAGTAGAGATGGGGTTTCTC
1281 CATGTTGGCCAGGCTGGTTTCGAACTCCTGACCTCAGGTGATCTACCCGCCTCAGCCTCCCAAAGTGCTGAAATTACAGG
1361 CGTGAGCCACCTCACCTGGCCATGTTCTTTATGGAATACTACAATGTGTTGTCACAGGATTTGTTATTCAGATGTCAATC
1441 ATTTTTATTTATATATTTCTGGGTAAAACTTATTAGTGGTGTGAGGAGTGCAGAATATGGAAGCTTACCTAAATTCTTTT
1521 TCTGCCAGCCAACATTTTAAAAGACAAATGATGCATCCTTTCTCAATGCTGCTAATTCTTTAAATTTTACATGTCCCAAT
1601 TTATTCCATTTGAGATTTATTTTAATGTTTTCAACCCCTGTGTAACATGTATCATGAGGAGAAAGCACTATCATTGATCA
1681 TCACTATGGATTAAAATATAGGAATATTTTACAGGGCAGTATGGGTGGGGGTGGGAGACATATTGGAATCGTGTTTTCTG
1761 GGATAAAATTTTTAAAAAGAATTAATCATTAGCCCTGAGTATTTTAGTCATTTGTGCCTATAGAAAACAACATGCTCTTT
1841 TATTGTGGACTTTCTTCTTTTAAGTGAGGTTTAATTTATATACAATACAATAACAGATTTTTAAGTATTCATTTGAGATG
1921 TTTTGACAACTGTATATATACATGTAACCATCACTGGAATCAGATATAGAATATTCCCCTTAAATATTGTCAGGTAAACA
2001 CATTGAGAATATTTTTTCCAGTCTGTGGCTTACCTACTTATTTTCATAATGAATGTTTTACTTGTGATGAAGATTTAACT
2081 TACCCTTTTACTTTAATGATTAATATTTTCTGTGTTCTTTCTAATAAATTTTACGAACTCTGAGGTTA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||: ||||   ||||||| 
Target 5' gcATTCTCCTGCCTCAGCCTc 3'
1181 - 1201 156.00 -20.30
2
miRNA  3' ggUAGAAG---GAAGUCGGAg 5'
            |||| |   | ||||||| 
Target 5' tgATCTACCCGCCTCAGCCTc 3'
1319 - 1339 152.00 -17.00
3
miRNA  3' ggUAGAAG----GAAGUCGGAg 5'
            ||:|||    | |::|||| 
Target 5' gtATTTTCAAGACCTTGGCCTa 3'
974 - 995 122.00 -10.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN508521 32 COSMIC
COSN508520 47 COSMIC
COSN30478410 53 COSMIC
COSN31601795 72 COSMIC
COSN18718091 100 COSMIC
COSN32001126 111 COSMIC
COSN1284756 137 COSMIC
COSN19563835 198 COSMIC
COSN6789114 326 COSMIC
COSN32057683 493 COSMIC
COSN17078274 758 COSMIC
COSN20091095 949 COSMIC
COSN20100404 971 COSMIC
COSN6789115 1402 COSMIC
COSN7722441 1752 COSMIC
COSN5151066 1798 COSMIC
COSN9583349 1881 COSMIC
COSN22365784 2026 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1423190966 5 dbSNP
rs1302116419 8 dbSNP
rs369159127 14 dbSNP
rs1432235539 15 dbSNP
rs765150544 16 dbSNP
rs1361114135 28 dbSNP
rs1246628167 29 dbSNP
rs200203562 31 dbSNP
rs755303914 34 dbSNP
rs781698183 35 dbSNP
rs372937091 42 dbSNP
rs750227530 42 dbSNP
rs376011427 43 dbSNP
rs756696780 47 dbSNP
rs778366533 50 dbSNP
rs1007370667 82 dbSNP
rs1211184215 87 dbSNP
rs577356805 90 dbSNP
rs1369686112 93 dbSNP
rs1305113352 100 dbSNP
rs1231668447 109 dbSNP
rs933427816 110 dbSNP
rs1297675912 112 dbSNP
rs1436724806 112 dbSNP
rs186481180 114 dbSNP
rs1162558874 115 dbSNP
rs968653378 131 dbSNP
rs988886668 143 dbSNP
rs913263647 146 dbSNP
rs563018058 151 dbSNP
rs576539660 162 dbSNP
rs1466317102 167 dbSNP
rs1360713071 170 dbSNP
rs1171567804 175 dbSNP
rs1431579862 180 dbSNP
rs1434318447 188 dbSNP
rs1391083220 195 dbSNP
rs191003049 196 dbSNP
rs1369725115 203 dbSNP
rs1043037599 206 dbSNP
rs1396822898 210 dbSNP
rs562017083 211 dbSNP
rs182949214 216 dbSNP
rs745466766 217 dbSNP
rs1182980469 220 dbSNP
rs1338753462 227 dbSNP
rs1244207430 234 dbSNP
rs547564942 235 dbSNP
rs1270874221 236 dbSNP
rs955651482 241 dbSNP
rs1210685862 248 dbSNP
rs992585436 257 dbSNP
rs916976502 262 dbSNP
rs1305280927 263 dbSNP
rs1057493664 267 dbSNP
rs560344722 278 dbSNP
rs1396501096 283 dbSNP
rs1045214748 285 dbSNP
rs1310834701 293 dbSNP
rs1414010900 300 dbSNP
rs895981091 307 dbSNP
rs1170733757 316 dbSNP
rs1013319673 330 dbSNP
rs1274281568 347 dbSNP
rs372971193 348 dbSNP
rs1026004170 349 dbSNP
rs376113348 350 dbSNP
rs769171126 351 dbSNP
rs1426057847 355 dbSNP
rs1256100723 371 dbSNP
rs1187591558 387 dbSNP
rs1285578886 388 dbSNP
rs781633135 396 dbSNP
rs1006315065 397 dbSNP
rs1015895258 404 dbSNP
rs1252024204 410 dbSNP
rs1483592372 410 dbSNP
rs897839075 418 dbSNP
rs964988313 422 dbSNP
rs1337083723 424 dbSNP
rs1200661107 425 dbSNP
rs1250244553 432 dbSNP
rs532188570 435 dbSNP
rs1052301742 438 dbSNP
rs890527307 444 dbSNP
rs1291368907 446 dbSNP
rs1007833834 452 dbSNP
rs1440371243 463 dbSNP
rs1331093014 464 dbSNP
rs1350912785 464 dbSNP
rs1389861857 476 dbSNP
rs1396110369 477 dbSNP
rs138715240 481 dbSNP
rs1294187051 483 dbSNP
rs1459511456 487 dbSNP
rs28488297 493 dbSNP
rs1164856918 506 dbSNP
rs904480676 509 dbSNP
rs1414610478 511 dbSNP
rs1180166075 518 dbSNP
rs1000115235 519 dbSNP
rs1451183008 542 dbSNP
rs770262077 555 dbSNP
rs1031558056 558 dbSNP
rs537717926 565 dbSNP
rs1213029128 575 dbSNP
rs1389306096 583 dbSNP
rs992470704 585 dbSNP
rs1024496346 586 dbSNP
rs913337027 592 dbSNP
rs1466403946 595 dbSNP
rs947464897 599 dbSNP
rs1304777023 603 dbSNP
rs1329823227 614 dbSNP
rs1281051856 615 dbSNP
rs1236696408 621 dbSNP
rs868633198 630 dbSNP
rs1335324834 635 dbSNP
rs746496010 640 dbSNP
rs1443127203 641 dbSNP
rs927315027 642 dbSNP
rs547782487 643 dbSNP
rs1458208103 647 dbSNP
rs1387845766 648 dbSNP
rs1157187803 650 dbSNP
rs1469952200 655 dbSNP
rs1362802830 664 dbSNP
rs969818526 668 dbSNP
rs981380096 675 dbSNP
rs926816505 676 dbSNP
rs1480085562 679 dbSNP
rs1321235363 680 dbSNP
rs937624291 681 dbSNP
rs1367444275 696 dbSNP
rs1203094598 700 dbSNP
rs1286263047 700 dbSNP
rs1349714403 702 dbSNP
rs201940185 714 dbSNP
rs1256765339 716 dbSNP
rs1236731567 717 dbSNP
rs575386694 723 dbSNP
rs1297582381 731 dbSNP
rs1057368673 732 dbSNP
rs1328640711 740 dbSNP
rs896013865 741 dbSNP
rs2553444 757 dbSNP
rs1175965393 758 dbSNP
rs973641018 767 dbSNP
rs919489133 772 dbSNP
rs1192383910 782 dbSNP
rs1243724782 792 dbSNP
rs370066116 792 dbSNP
rs1051756269 795 dbSNP
rs372374573 796 dbSNP
rs533680319 798 dbSNP
rs1212829368 799 dbSNP
rs377122745 799 dbSNP
rs56671596 799 dbSNP
rs796080602 799 dbSNP
rs886198454 806 dbSNP
rs1005928656 810 dbSNP
rs943464617 811 dbSNP
rs200199654 816 dbSNP
rs1279887572 838 dbSNP
rs187496632 842 dbSNP
rs1341590797 844 dbSNP
rs1039489303 845 dbSNP
rs1430609040 851 dbSNP
rs1341645071 852 dbSNP
rs1037809977 856 dbSNP
rs1413398016 857 dbSNP
rs1465909874 875 dbSNP
rs1373176896 880 dbSNP
rs1000000969 881 dbSNP
rs1186572416 884 dbSNP
rs1409997385 884 dbSNP
rs75817507 890 dbSNP
rs1247386630 891 dbSNP
rs1475034525 898 dbSNP
rs996525245 900 dbSNP
rs1189720033 907 dbSNP
rs1484575766 920 dbSNP
rs878915970 932 dbSNP
rs771018995 934 dbSNP
rs1014364425 936 dbSNP
rs1439822433 938 dbSNP
rs1375732543 942 dbSNP
rs954585694 943 dbSNP
rs539627858 948 dbSNP
rs1465669719 953 dbSNP
rs201806609 970 dbSNP
rs746989308 970 dbSNP
rs145728883 973 dbSNP
rs556691015 975 dbSNP
rs1020091064 987 dbSNP
rs1214122694 1001 dbSNP
rs17036337 1008 dbSNP
rs978861049 1009 dbSNP
rs17036339 1010 dbSNP
rs1368863249 1011 dbSNP
rs958717508 1024 dbSNP
rs1442452150 1027 dbSNP
rs1355974161 1032 dbSNP
rs1389051868 1033 dbSNP
rs746452126 1045 dbSNP
rs992767361 1061 dbSNP
rs1299565464 1063 dbSNP
rs917513824 1066 dbSNP
rs1312048473 1069 dbSNP
rs892144407 1073 dbSNP
rs930196519 1078 dbSNP
rs1009711987 1080 dbSNP
rs919539853 1089 dbSNP
rs1268425239 1091 dbSNP
rs1203830028 1092 dbSNP
rs1275548960 1092 dbSNP
rs1421090561 1092 dbSNP
rs535829428 1092 dbSNP
rs71586114 1092 dbSNP
rs929552117 1105 dbSNP
rs75596418 1110 dbSNP
rs1330567874 1112 dbSNP
rs1187375551 1113 dbSNP
rs1266961755 1114 dbSNP
rs1225899174 1117 dbSNP
rs141837157 1117 dbSNP
rs1192854505 1118 dbSNP
rs1264992124 1121 dbSNP
rs1374979054 1125 dbSNP
rs1277423146 1131 dbSNP
rs1030120933 1132 dbSNP
rs910047435 1135 dbSNP
rs1327381591 1138 dbSNP
rs941807206 1139 dbSNP
rs1393720612 1154 dbSNP
rs943330571 1158 dbSNP
rs562105570 1159 dbSNP
rs770501941 1162 dbSNP
rs900189463 1164 dbSNP
rs926003127 1183 dbSNP
rs935842538 1184 dbSNP
rs759715667 1190 dbSNP
rs1254939448 1194 dbSNP
rs1052925090 1198 dbSNP
rs767304599 1204 dbSNP
rs891750363 1205 dbSNP
rs1315530400 1212 dbSNP
rs1292353278 1223 dbSNP
rs1281650780 1224 dbSNP
rs1367319727 1225 dbSNP
rs1222820043 1226 dbSNP
rs1014168189 1240 dbSNP
rs995874909 1241 dbSNP
rs1051399486 1243 dbSNP
rs890384904 1251 dbSNP
rs775207724 1256 dbSNP
rs1290631223 1261 dbSNP
rs1010154979 1272 dbSNP
rs760509166 1273 dbSNP
rs1001586023 1276 dbSNP
rs1020164679 1281 dbSNP
rs764007576 1284 dbSNP
rs962423385 1297 dbSNP
rs1158164122 1298 dbSNP
rs1305589411 1303 dbSNP
rs1397189819 1315 dbSNP
rs995000313 1316 dbSNP
rs753779963 1317 dbSNP
rs1000712512 1328 dbSNP
rs191173935 1329 dbSNP
rs959015874 1330 dbSNP
rs1205550969 1342 dbSNP
rs150384021 1353 dbSNP
rs138100018 1358 dbSNP
rs912100480 1362 dbSNP
rs1212122395 1365 dbSNP
rs1348153063 1371 dbSNP
rs1282032411 1377 dbSNP
rs1231368542 1390 dbSNP
rs1311131705 1397 dbSNP
rs1295719173 1399 dbSNP
rs764797812 1401 dbSNP
rs867870672 1405 dbSNP
rs1359851893 1407 dbSNP
rs1288066634 1409 dbSNP
rs1415173240 1410 dbSNP
rs975130251 1413 dbSNP
rs1425686293 1415 dbSNP
rs1434143233 1424 dbSNP
rs1373687115 1430 dbSNP
rs1163257255 1444 dbSNP
rs926053681 1448 dbSNP
rs982985995 1462 dbSNP
rs764256512 1470 dbSNP
rs910067943 1472 dbSNP
rs183300655 1473 dbSNP
rs796291033 1474 dbSNP
rs913070631 1480 dbSNP
rs949895909 1482 dbSNP
rs745543456 1499 dbSNP
rs1305626348 1500 dbSNP
rs187677440 1503 dbSNP
rs1407609007 1505 dbSNP
rs1233622971 1521 dbSNP
rs921714961 1533 dbSNP
rs1357168799 1535 dbSNP
rs1001239476 1540 dbSNP
rs562293656 1544 dbSNP
rs531509811 1546 dbSNP
rs1379229472 1548 dbSNP
rs1299965932 1552 dbSNP
rs1460535216 1554 dbSNP
rs548068424 1560 dbSNP
rs1354408507 1573 dbSNP
rs985926927 1575 dbSNP
rs1229574365 1596 dbSNP
rs1476493838 1621 dbSNP
rs1416110411 1638 dbSNP
rs1309987300 1661 dbSNP
rs1358572918 1667 dbSNP
rs750101182 1669 dbSNP
rs1051468156 1671 dbSNP
rs567763621 1672 dbSNP
rs527270648 1673 dbSNP
rs1041618192 1674 dbSNP
rs904416573 1677 dbSNP
rs1214212954 1689 dbSNP
rs1481984283 1691 dbSNP
rs1291199285 1693 dbSNP
rs1000049044 1694 dbSNP
rs1034564073 1703 dbSNP
rs1243879748 1707 dbSNP
rs1336512505 1709 dbSNP
rs149553633 1717 dbSNP
rs1238311122 1718 dbSNP
rs1484378541 1723 dbSNP
rs1014288765 1724 dbSNP
rs1413180392 1727 dbSNP
rs950925712 1728 dbSNP
rs1450566448 1732 dbSNP
rs1171112227 1733 dbSNP
rs1024292302 1739 dbSNP
rs570467720 1752 dbSNP
rs539474003 1754 dbSNP
rs1429563925 1767 dbSNP
rs556490306 1768 dbSNP
rs192124706 1771 dbSNP
rs1237010132 1772 dbSNP
rs1193783535 1775 dbSNP
rs1009456059 1777 dbSNP
rs1019217310 1780 dbSNP
rs1208961972 1780 dbSNP
rs1359336371 1781 dbSNP
rs1017204620 1782 dbSNP
rs573891461 1785 dbSNP
rs975613989 1789 dbSNP
rs921392129 1793 dbSNP
rs931755086 1794 dbSNP
rs536201471 1801 dbSNP
rs987206733 1815 dbSNP
rs556077587 1820 dbSNP
rs1435714565 1822 dbSNP
rs1299799402 1833 dbSNP
rs1339767105 1838 dbSNP
rs1387547317 1840 dbSNP
rs1157214871 1851 dbSNP
rs925939167 1854 dbSNP
rs1379306792 1864 dbSNP
rs72673865 1865 dbSNP
rs1251033539 1868 dbSNP
rs1198122287 1876 dbSNP
rs1279096179 1879 dbSNP
rs1263519085 1881 dbSNP
rs1203170495 1882 dbSNP
rs1353257023 1886 dbSNP
rs1041749738 1895 dbSNP
rs878867641 1905 dbSNP
rs1236563329 1907 dbSNP
rs1314104192 1911 dbSNP
rs1208285530 1921 dbSNP
rs1345870722 1921 dbSNP
rs957317653 1921 dbSNP
rs988909620 1926 dbSNP
rs144239124 1930 dbSNP
rs1359481958 1931 dbSNP
rs879287344 1931 dbSNP
rs981671579 1933 dbSNP
rs927267493 1944 dbSNP
rs185006504 1954 dbSNP
rs1246765698 1955 dbSNP
rs543854876 1958 dbSNP
rs1055672920 1968 dbSNP
rs1475664491 1974 dbSNP
rs1374792131 1975 dbSNP
rs1173465879 1979 dbSNP
rs1427706007 1982 dbSNP
rs894302465 1988 dbSNP
rs1190744060 2001 dbSNP
rs898175594 2003 dbSNP
rs756469521 2016 dbSNP
rs929614257 2019 dbSNP
rs1173593826 2020 dbSNP
rs1484827043 2026 dbSNP
rs1014320017 2027 dbSNP
rs1046816306 2037 dbSNP
rs1024323314 2040 dbSNP
rs1342078235 2042 dbSNP
rs188270278 2056 dbSNP
rs562673409 2065 dbSNP
rs1356545072 2066 dbSNP
rs531399940 2085 dbSNP
rs192608986 2098 dbSNP
rs900790927 2103 dbSNP
rs996432379 2111 dbSNP
rs1410102659 2113 dbSNP
rs962994351 2114 dbSNP
rs1275150974 2115 dbSNP
rs976063051 2134 dbSNP
rs576638737 2135 dbSNP
rs1033226256 2136 dbSNP
rs963266142 2144 dbSNP
rs1028520293 2149 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control HITS-CLIP data was present in GSM1048188. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_ptb_knockdown ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ggUAGAAGGA---AGUCGGAg 5'
            ||: ||||   ||||||| 
Target 5' gcAUUCUCCUGCCUCAGCCUc 3'
1 - 21
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM4903829
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_a
Location of target site NM_024751 | 3UTR | CUCCCAAAGUGCUGAAAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903830
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_b
Location of target site NM_024751 | 3UTR | CUCCCAAAGUGCUGAAAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_024751 | 3UTR | UACCCGCCUCAGCCUCCCAAAGUGCUGAAAUUACAGGCGUGAGCCACCUCACCUGGCCAUGUUCUUUAUGGAAUACUACAAUGUGUUGUCACAGGAUUUGUUAUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_024751 | 3UTR | CUGACCUCAGGUGAUCUACCCGCCUCAGCCUCCCAAAGUGCUGAAAUUACAGGCGUGAGCCACCUCACCUGGCCAUGUUCUUUAUGGAAUACUACAAUGUGUUGUCACAGGAUUUGUUAUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_024751 | 3UTR | CCGCCUCAGCCUCCCAAAGUGCUGAAAUUACAGGCGUGAGCCACCUCACCUGGCCAUGUUCUUUAUGGAAUACUACAAUGUGUUGUCACAGGAUUUGUUAUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_024751 | 3UTR | CCUCAGCCUCCCAAAGUGCUGAAAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_024751 | 3UTR | CCUCCCAAAGUGCUGAAAUUACAGGCGUGAGCCACCUCACCUGGCCAUGUUCUUUAUGGAAUACUACAAUGUGUUGUCACAGGAUUUGUUAUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_024751 | 3UTR | CCUCAGCCUCCCAAAGUGCUGAAAUUACAGGCGUGAGCCACCUCACCUGGCCAUGUUCUUUAUGGAAUACUACAAUGUGUUGUCACAGGAUUUGUUAUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000515279.1 | 3UTR | CUGCAUUCUCCUGCCUCAGCCUCCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
CLIP-seq Support 10 for dataset GSM1048188
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_ptb_knockdown
Location of target site ENST00000515279.1 | 3UTR | GCAUUCUCCUGCCUCAGCCUCCCGAGUAGCUAGGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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