pre-miRNA Information
pre-miRNA hsa-mir-412   
Genomic Coordinates chr14: 101065447 - 101065537
Synonyms MIRN412, hsa-mir-412, MIR412
Description Homo sapiens miR-412 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-412-3p
Sequence 54| ACUUCACCUGGUCCACUAGCCGU |76
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
rs61992671 18 GWAS
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs369997462 1 dbSNP
rs1439693090 7 dbSNP
rs1301668924 11 dbSNP
rs534204576 13 dbSNP
rs775386036 14 dbSNP
rs762832140 15 dbSNP
rs1203323285 16 dbSNP
rs61992671 18 dbSNP
rs1022012324 19 dbSNP
rs1207609936 20 dbSNP
rs139967426 21 dbSNP
rs539487075 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF682   
Synonyms BC39498_3
Description zinc finger protein 682
Transcript NM_001077349   
Other Transcripts NM_033196   
Expression
Putative miRNA Targets on ZNF682
3'UTR of ZNF682
(miRNA target sites are highlighted)
>ZNF682|NM_001077349|3'UTR
   1 GAATTTTTACTAAAGAGAAATCCTACAAATGTAAAGAATGTGGCAAATTCCATAAATCTTGCTCAAGGCATTGAAATCAC
  81 AAGATAATTCATACTGGAGAGAAACACTACAAATGTGAAGAATGTGGGGAAAGTCTTCAACCATTGCTGACAGCTTATTG
 161 CACAGAAGAAAATTCATGCTGAGAAAAATTCTGATTTTAAAGAATGTGGCAAAGCATTTAATAACTACTATGAACTTACT
 241 CATCAGAGGTTTTGTGCTAGATAAAAGCAATGTAAGTGTAATGATACACATTACATTTATCTGTGGAAAGATGTCACCAA
 321 ATAAAAGCCTTAGAGTACACAAGGTGTAATGATAGTGATACATTACATTTGTACATGGAAAGACTTCAAAAATATAAGCC
 401 TTAGAGTACACAAGAGTTTTTATACTGAAGAAAAACATTACAAATATAAAGATTGTTGCAATACTTTTACTTATGTTACA
 481 GATTTTGTTGTACATAGGAGAATTTATACTGAAAGGTAACCCTCTAACAGTTGCTCAAATTTTATTCCATTTTAGATAAT
 561 TTACATTGGAAAGAAACCCTACAACTGTAATGAATATGAAAAAAATTGTTTAAAAAGTACACCTTAGAAAACACTAGTTT
 641 AAGGCCGGGCGCGGTGGCTCACACTTATAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGGATCACGAGGTCAGGAGATC
 721 GAGACCACGATGAAACCCTGTCTCTACTAAAAATACAAAAAATTAGCTGGGCATGTTGTCGGGTGCCTGTAGTCCCAGCT
 801 ACTGGGAGAGGCTGAGGCAGGAGAATGGCGTGAACCCGAGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGAACT
 881 CCAACCTGGGCGACAGAGACTCTGTCTCAAAAAAAAAGAAAGAACGCTAGTTTATATGAAAGCATTTAACAGATGCAGTA
 961 AATATAAAAAATTAATAAAAAATTAAGTCTAAATGAACATCAGAAGATTCACAGTAGAAACCACTAAGACGCTAACACTT
1041 TCAATGTTATTCTAAATCAGGGCATTGATTATAAAGAGTAATTCAAGGTTAACATAATTTAGTTAGCCTAAACAGAAATA
1121 GGAGATTAATATTTTGAGACTTAAACAATTATATTCAAAGTACACTTTTTGCATTGAAAGAATTTTAGATTTTTACAAAG
1201 GCAAATTTTGATGTAATTGAACTCTCAAATTACTTGATGCTGTGTCTTTATTCCTAGTGTCTGTATGAAAGCATGTGGTC
1281 AATTTCTGCTGCTCGGGGTTTGAGAAGTTCTATATTAGGATGTCATTTACATACTTTTCAACAGAAGATTGAGGACACTG
1361 AAATATGAGGTGTGTGAAGAAAGTACACAGAGAAACTTTTGTGGTTGACTTATAAAACTTGTAAGTGCTGCATGAGATAG
1441 ATGTTCAGAGTAATAGTCTTGTGCATTATTCAAATTTTAGTAAATTGTTTTACCAATTGCACATTAGATAGTATAGTGGA
1521 TTTTGTAATGCTTTTCTTAGACTGTGTGAACTTAGTTTCAATAAAACAATTATTTTTAATGTGTTAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugcCGAUCACCUGGUCC-ACUUCa 5'
             |||| |||:  ||| |||:| 
Target 5' ccaGCTACTGGGAGAGGCTGAGGc 3'
795 - 818 124.00 -18.40
2
miRNA  3' ugCCGAUCACCUGG---UCCACUUCa 5'
            ||| :| |||:|   |||| |:| 
Target 5' gaGGCAGGCGGATCACGAGGTCAGGa 3'
691 - 716 121.00 -16.60
3
miRNA  3' ugccgaucaccuggucCACUUCa 5'
                          |||||| 
Target 5' gagaaacactacaaatGTGAAGa 3'
99 - 121 120.00 -7.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30503876 3 COSMIC
COSN31510321 23 COSMIC
COSN30483459 51 COSMIC
COSN30505185 62 COSMIC
COSN30188242 67 COSMIC
COSN30640126 67 COSMIC
COSN31961524 79 COSMIC
COSN30477694 90 COSMIC
COSN31586537 99 COSMIC
COSN19695400 173 COSMIC
COSN27039888 651 COSMIC
COSN7117608 728 COSMIC
COSN6139293 829 COSMIC
COSN9350461 833 COSMIC
COSN20115569 1165 COSMIC
COSN23596762 1406 COSMIC
COSN25676147 1541 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs774780429 3 dbSNP
rs1324176711 16 dbSNP
rs77200511 17 dbSNP
rs751709123 18 dbSNP
rs187018165 22 dbSNP
rs769391025 28 dbSNP
rs745466116 31 dbSNP
rs77288754 37 dbSNP
rs78187010 38 dbSNP
rs74463300 39 dbSNP
rs1303770572 40 dbSNP
rs1366646352 42 dbSNP
rs779751099 43 dbSNP
rs781027299 43 dbSNP
rs374716859 45 dbSNP
rs1444321139 48 dbSNP
rs182845369 52 dbSNP
rs527573632 61 dbSNP
rs1378204260 62 dbSNP
rs926503670 64 dbSNP
rs141272196 80 dbSNP
rs551308675 87 dbSNP
rs1270901165 92 dbSNP
rs940576753 99 dbSNP
rs967954543 104 dbSNP
rs145357593 115 dbSNP
rs1185500623 117 dbSNP
rs1269272894 130 dbSNP
rs984615181 135 dbSNP
rs1486974655 140 dbSNP
rs1258803886 145 dbSNP
rs1216395035 146 dbSNP
rs530531525 147 dbSNP
rs1473627964 160 dbSNP
rs12327700 173 dbSNP
rs150453306 174 dbSNP
rs1458661821 179 dbSNP
rs971089285 199 dbSNP
rs1394844681 202 dbSNP
rs1019955264 203 dbSNP
rs1391148494 205 dbSNP
rs1308375194 209 dbSNP
rs560099130 209 dbSNP
rs1230898722 215 dbSNP
rs140867326 223 dbSNP
rs370794225 223 dbSNP
rs1009831785 230 dbSNP
rs1008676961 231 dbSNP
rs891260153 239 dbSNP
rs892679550 242 dbSNP
rs997063401 244 dbSNP
rs1252470803 249 dbSNP
rs1032942667 253 dbSNP
rs1319962006 260 dbSNP
rs540951812 261 dbSNP
rs1417313066 262 dbSNP
rs889273100 263 dbSNP
rs1167222871 266 dbSNP
rs578205080 269 dbSNP
rs764943349 272 dbSNP
rs1476210109 289 dbSNP
rs997555658 290 dbSNP
rs1413538216 293 dbSNP
rs140649315 296 dbSNP
rs1036279670 309 dbSNP
rs544490486 317 dbSNP
rs1228358376 327 dbSNP
rs1056936651 328 dbSNP
rs1305344284 333 dbSNP
rs117902742 338 dbSNP
rs1049438342 339 dbSNP
rs939463476 346 dbSNP
rs937213369 352 dbSNP
rs1208694183 353 dbSNP
rs1256680941 357 dbSNP
rs1483637631 359 dbSNP
rs926424022 360 dbSNP
rs1259929986 368 dbSNP
rs1428212125 371 dbSNP
rs1169453723 381 dbSNP
rs1392472075 390 dbSNP
rs980574001 393 dbSNP
rs967904256 404 dbSNP
rs915151294 405 dbSNP
rs373277885 415 dbSNP
rs1448144087 416 dbSNP
rs981221754 420 dbSNP
rs1304013285 422 dbSNP
rs956561688 432 dbSNP
rs1433976484 436 dbSNP
rs971103007 439 dbSNP
rs1018627048 446 dbSNP
rs1344088955 447 dbSNP
rs1231753089 453 dbSNP
rs761608731 454 dbSNP
rs556338975 463 dbSNP
rs75105670 467 dbSNP
rs763904721 468 dbSNP
rs151319989 474 dbSNP
rs1271773322 479 dbSNP
rs192743596 490 dbSNP
rs775188642 492 dbSNP
rs1250093797 493 dbSNP
rs1431171007 503 dbSNP
rs144236305 516 dbSNP
rs1193335071 519 dbSNP
rs187552718 519 dbSNP
rs1004495113 522 dbSNP
rs1324172691 526 dbSNP
rs1157538062 531 dbSNP
rs901910292 531 dbSNP
rs117643566 538 dbSNP
rs1004913460 540 dbSNP
rs887756647 542 dbSNP
rs1395334390 544 dbSNP
rs868296959 547 dbSNP
rs17767135 557 dbSNP
rs937246645 567 dbSNP
rs773703543 569 dbSNP
rs1368026880 572 dbSNP
rs1422259474 576 dbSNP
rs184169396 579 dbSNP
rs748605571 591 dbSNP
rs912957511 594 dbSNP
rs374025919 597 dbSNP
rs1282029822 600 dbSNP
rs1209389878 606 dbSNP
rs534982843 606 dbSNP
rs58343046 606 dbSNP
rs1270270417 608 dbSNP
rs1467258301 610 dbSNP
rs1477922063 612 dbSNP
rs988955258 613 dbSNP
rs191033109 617 dbSNP
rs776978239 622 dbSNP
rs1407837655 635 dbSNP
rs1191373487 644 dbSNP
rs925608031 646 dbSNP
rs911508909 647 dbSNP
rs1459605810 650 dbSNP
rs768909954 651 dbSNP
rs747180903 653 dbSNP
rs1350296431 654 dbSNP
rs953198719 664 dbSNP
rs1029133384 668 dbSNP
rs973175698 672 dbSNP
rs780134798 676 dbSNP
rs1332747653 687 dbSNP
rs1209517610 690 dbSNP
rs549099841 691 dbSNP
rs997609376 698 dbSNP
rs966167621 700 dbSNP
rs1014984836 706 dbSNP
rs1005374453 707 dbSNP
rs529326140 711 dbSNP
rs1184962331 713 dbSNP
rs1443390021 715 dbSNP
rs1473922559 720 dbSNP
rs140310616 721 dbSNP
rs1414009598 725 dbSNP
rs1330835407 728 dbSNP
rs200690625 729 dbSNP
rs1440069961 736 dbSNP
rs377341520 744 dbSNP
rs1410421272 754 dbSNP
rs1309748620 763 dbSNP
rs1353683285 763 dbSNP
rs1244102033 770 dbSNP
rs1045603417 771 dbSNP
rs887368554 772 dbSNP
rs949895458 774 dbSNP
rs533319567 778 dbSNP
rs1052914435 780 dbSNP
rs935743719 781 dbSNP
rs564629654 783 dbSNP
rs1175911617 784 dbSNP
rs1455351033 785 dbSNP
rs374925245 789 dbSNP
rs1253213921 793 dbSNP
rs1186157967 794 dbSNP
rs1237704624 798 dbSNP
rs985505482 805 dbSNP
rs932247115 806 dbSNP
rs1430129676 808 dbSNP
rs1170442621 817 dbSNP
rs1234065047 818 dbSNP
rs922214377 823 dbSNP
rs147554222 829 dbSNP
rs1342336566 830 dbSNP
rs562248269 832 dbSNP
rs8107725 838 dbSNP
rs1343358292 839 dbSNP
rs935212378 844 dbSNP
rs1344847475 845 dbSNP
rs911806994 846 dbSNP
rs1278786808 849 dbSNP
rs1348936112 859 dbSNP
rs987835532 861 dbSNP
rs1308839256 862 dbSNP
rs866523646 867 dbSNP
rs1389839656 868 dbSNP
rs983563107 869 dbSNP
rs553452794 870 dbSNP
rs931650783 871 dbSNP
rs1027675064 873 dbSNP
rs1374160305 878 dbSNP
rs553794609 891 dbSNP
rs533562914 892 dbSNP
rs1315243548 900 dbSNP
rs879335918 901 dbSNP
rs1320168269 902 dbSNP
rs1383246639 904 dbSNP
rs1435692400 905 dbSNP
rs778966230 912 dbSNP
rs577563929 913 dbSNP
rs963139469 915 dbSNP
rs1017072748 918 dbSNP
rs982977532 918 dbSNP
rs1277083766 919 dbSNP
rs544417452 920 dbSNP
rs1035274897 925 dbSNP
rs951664639 925 dbSNP
rs557807763 926 dbSNP
rs1265076359 934 dbSNP
rs1432363345 953 dbSNP
rs1199531395 954 dbSNP
rs1409538779 961 dbSNP
rs1177272907 972 dbSNP
rs1158435580 974 dbSNP
rs1468406530 977 dbSNP
rs1014180547 980 dbSNP
rs1023611136 983 dbSNP
rs1324113819 983 dbSNP
rs891669311 983 dbSNP
rs1255296543 985 dbSNP
rs1304075417 993 dbSNP
rs1334442243 995 dbSNP
rs1010906632 997 dbSNP
rs1212881080 998 dbSNP
rs893900783 1014 dbSNP
rs757136095 1016 dbSNP
rs1053330623 1020 dbSNP
rs537734840 1027 dbSNP
rs186263305 1030 dbSNP
rs999365387 1031 dbSNP
rs139519681 1032 dbSNP
rs7254478 1035 dbSNP
rs1210155142 1036 dbSNP
rs1269384086 1044 dbSNP
rs1482072371 1048 dbSNP
rs1181351331 1049 dbSNP
rs904241300 1050 dbSNP
rs1049476308 1055 dbSNP
rs1162981704 1057 dbSNP
rs1368061200 1060 dbSNP
rs535239359 1062 dbSNP
rs1295582754 1084 dbSNP
rs1369089934 1089 dbSNP
rs1307867286 1093 dbSNP
rs1409810193 1099 dbSNP
rs1051676752 1100 dbSNP
rs1227788430 1102 dbSNP
rs1350614025 1102 dbSNP
rs566863625 1110 dbSNP
rs1411076938 1113 dbSNP
rs1310154899 1116 dbSNP
rs931902299 1121 dbSNP
rs1245063654 1128 dbSNP
rs1354158239 1136 dbSNP
rs1295688328 1145 dbSNP
rs1415884100 1148 dbSNP
rs922268600 1152 dbSNP
rs369852498 1165 dbSNP
rs869071397 1165 dbSNP
rs3067680 1166 dbSNP
rs10638239 1167 dbSNP
rs79109693 1167 dbSNP
rs1484088137 1171 dbSNP
rs201203183 1171 dbSNP
rs547027459 1172 dbSNP
rs1451266301 1174 dbSNP
rs1424681422 1176 dbSNP
rs1167158447 1177 dbSNP
rs1388757744 1178 dbSNP
rs1037372834 1188 dbSNP
rs944924316 1197 dbSNP
rs941725049 1200 dbSNP
rs1372887109 1209 dbSNP
rs1463073301 1211 dbSNP
rs1164800481 1217 dbSNP
rs908036994 1229 dbSNP
rs983644358 1230 dbSNP
rs984002670 1239 dbSNP
rs183067102 1263 dbSNP
rs190459183 1265 dbSNP
rs980166397 1270 dbSNP
rs1227327051 1273 dbSNP
rs1275273644 1288 dbSNP
rs1344140138 1293 dbSNP
rs551328654 1294 dbSNP
rs1362142565 1295 dbSNP
rs149297353 1297 dbSNP
rs1014190270 1306 dbSNP
rs1183857020 1310 dbSNP
rs1429257040 1310 dbSNP
rs1246378717 1312 dbSNP
rs562339707 1320 dbSNP
rs1189538771 1328 dbSNP
rs542456590 1331 dbSNP
rs956125129 1339 dbSNP
rs573955248 1349 dbSNP
rs79204341 1366 dbSNP
rs1466072918 1372 dbSNP
rs1338324622 1390 dbSNP
rs1385910968 1394 dbSNP
rs1434090509 1394 dbSNP
rs1332794818 1395 dbSNP
rs78319978 1400 dbSNP
rs1010855752 1404 dbSNP
rs1363797315 1408 dbSNP
rs904335439 1409 dbSNP
rs1049981277 1413 dbSNP
rs996544460 1415 dbSNP
rs900853966 1432 dbSNP
rs1312878920 1433 dbSNP
rs752358243 1438 dbSNP
rs1266477422 1440 dbSNP
rs1464669881 1443 dbSNP
rs1031068804 1456 dbSNP
rs1250348713 1459 dbSNP
rs1477227969 1461 dbSNP
rs758256644 1463 dbSNP
rs1191158138 1465 dbSNP
rs908092171 1467 dbSNP
rs775540815 1468 dbSNP
rs1000048855 1482 dbSNP
rs1426433397 1496 dbSNP
rs1326357337 1501 dbSNP
rs534273416 1502 dbSNP
rs930831560 1503 dbSNP
rs1456429312 1507 dbSNP
rs890268444 1509 dbSNP
rs558968591 1513 dbSNP
rs376916773 1515 dbSNP
rs1292889846 1529 dbSNP
rs1368134726 1531 dbSNP
rs996052608 1542 dbSNP
rs1286595888 1543 dbSNP
rs980218713 1545 dbSNP
rs1229288794 1550 dbSNP
rs778875253 1556 dbSNP
rs533382413 1559 dbSNP
rs900425972 1566 dbSNP
rs1247802740 1573 dbSNP
rs1489790905 1574 dbSNP
rs1180629210 1575 dbSNP
rs139648020 1583 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048188. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_ptb_knockdown ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048188
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_ptb_knockdown
Location of target site ENST00000397165.2 | 3UTR | AAGAUAAUUCAUACUGGAGAGAAACACUACAAAUGUGAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
138 hsa-miR-412-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT005780 ACVR1C activin A receptor type 1C 1 1
MIRT062013 YOD1 YOD1 deubiquitinase 2 2
MIRT345112 ATXN7L3 ataxin 7 like 3 2 2
MIRT383735 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT396956 CELF1 CUGBP Elav-like family member 1 2 2
MIRT439280 XIAP X-linked inhibitor of apoptosis 1 1
MIRT439313 VAT1 vesicle amine transport 1 1 1
MIRT439375 TUBA1A tubulin alpha 1a 1 1
MIRT439418 TMOD1 tropomodulin 1 1 1
MIRT439503 SURF4 surfeit 4 1 1
MIRT439563 SON SON DNA binding protein 1 1
MIRT439598 SLC3A2 solute carrier family 3 member 2 1 1
MIRT439670 SETD1B SET domain containing 1B 1 1
MIRT439767 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT439922 PPL periplakin 1 1
MIRT439947 PLEKHA6 pleckstrin homology domain containing A6 1 1
MIRT439952 PLCB4 phospholipase C beta 4 1 1
MIRT439961 PKD1 polycystin 1, transient receptor potential channel interacting 1 1
MIRT440005 PEG3 paternally expressed 3 1 1
MIRT440061 OSBPL8 oxysterol binding protein like 8 1 1
MIRT440166 MYH14 myosin heavy chain 14 1 1
MIRT440276 MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1 1 1
MIRT440437 IPO13 importin 13 1 1
MIRT440441 INTS3 integrator complex subunit 3 1 1
MIRT440448 INS insulin 1 1
MIRT440461 IGF2R insulin like growth factor 2 receptor 1 1
MIRT440472 IARS isoleucyl-tRNA synthetase 1 1
MIRT440530 GUCY1A3 guanylate cyclase 1 soluble subunit alpha 1 1
MIRT440542 GOLGA2 golgin A2 1 1
MIRT440569 GIGYF1 GRB10 interacting GYF protein 1 1 1
MIRT440608 FTSJD2 cap methyltransferase 1 1 1
MIRT440750 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 1 1
MIRT440781 DOT1L DOT1 like histone lysine methyltransferase 1 1
MIRT440804 DNAJA4 DnaJ heat shock protein family (Hsp40) member A4 1 1
MIRT440867 CSDE1 cold shock domain containing E1 1 1
MIRT440890 CPEB4 cytoplasmic polyadenylation element binding protein 4 1 1
MIRT440917 COL1A1 collagen type I alpha 1 chain 1 1
MIRT440967 CDH22 cadherin 22 1 1
MIRT440968 CDH2 cadherin 2 1 1
MIRT441024 CALR calreticulin 1 1
MIRT441278 ACTB actin beta 1 1
MIRT448421 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT462833 BCL3 B-cell CLL/lymphoma 3 2 2
MIRT465062 TSR1 TSR1, ribosome maturation factor 2 2
MIRT476050 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT485318 MZT1 mitotic spindle organizing protein 1 2 4
MIRT493584 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 6
MIRT494567 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497393 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT503250 ZNF257 zinc finger protein 257 2 10
MIRT503656 ZNF138 zinc finger protein 138 2 10
MIRT505882 RNF219 ring finger protein 219 2 2
MIRT507525 DSTN destrin, actin depolymerizing factor 2 4
MIRT510663 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT514682 ZNF701 zinc finger protein 701 2 4
MIRT515370 ZNF208 zinc finger protein 208 2 6
MIRT525237 KCNJ12 potassium voltage-gated channel subfamily J member 12 2 2
MIRT527963 MTAP methylthioadenosine phosphorylase 2 2
MIRT528482 STAMBPL1 STAM binding protein like 1 2 2
MIRT529909 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531558 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT532234 KLF2 Kruppel like factor 2 2 4
MIRT532480 HOXA13 homeobox A13 2 2
MIRT535544 P2RY2 purinergic receptor P2Y2 2 2
MIRT547311 NR1D2 nuclear receptor subfamily 1 group D member 2 2 2
MIRT551795 ZNF117 zinc finger protein 117 2 4
MIRT554939 RAP1A RAP1A, member of RAS oncogene family 2 2
MIRT558171 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT568771 LY6K lymphocyte antigen 6 family member K 2 2
MIRT570766 ZNF99 zinc finger protein 99 2 2
MIRT572405 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT573396 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT610403 RXRB retinoid X receptor beta 2 2
MIRT610886 SCN8A sodium voltage-gated channel alpha subunit 8 2 2
MIRT611197 TMEM105 transmembrane protein 105 2 2
MIRT611244 ZNF550 zinc finger protein 550 2 2
MIRT615669 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 4
MIRT617974 DOCK4 dedicator of cytokinesis 4 2 2
MIRT619150 ZNF326 zinc finger protein 326 2 2
MIRT619608 MKKS McKusick-Kaufman syndrome 2 2
MIRT621053 DGKD diacylglycerol kinase delta 2 2
MIRT623665 HRK harakiri, BCL2 interacting protein 2 2
MIRT624883 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT624939 MARCH2 membrane associated ring-CH-type finger 2 2 2
MIRT634198 TMOD2 tropomodulin 2 2 4
MIRT636727 AGO2 argonaute 2, RISC catalytic component 2 2
MIRT637741 POLR3K RNA polymerase III subunit K 2 2
MIRT638002 ZC3H13 zinc finger CCCH-type containing 13 2 2
MIRT640395 ZNF785 zinc finger protein 785 2 2
MIRT640505 ANTXR1 anthrax toxin receptor 1 2 2
MIRT641293 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT641863 STOML1 stomatin like 1 2 2
MIRT642600 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT642895 CASP1 caspase 1 2 2
MIRT643967 FHL2 four and a half LIM domains 2 2 4
MIRT645237 KCTD12 potassium channel tetramerization domain containing 12 2 2
MIRT646621 CENPL centromere protein L 2 2
MIRT648620 CYB561A3 cytochrome b561 family member A3 2 2
MIRT648908 ZNF551 zinc finger protein 551 2 2
MIRT649439 HIBADH 3-hydroxyisobutyrate dehydrogenase 2 2
MIRT650637 LTF lactotransferrin 2 2
MIRT650971 STARD3NL STARD3 N-terminal like 2 2
MIRT651067 ZNF518B zinc finger protein 518B 2 4
MIRT652384 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT653958 SEPN1 selenoprotein N 2 2
MIRT656885 KIF1C kinesin family member 1C 2 2
MIRT657965 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658080 FOXR2 forkhead box R2 2 2
MIRT662570 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT663089 METTL10 EEF1A lysine methyltransferase 2 2 2
MIRT683705 ZNF195 zinc finger protein 195 2 2
MIRT683835 ZNF682 zinc finger protein 682 2 2
MIRT706811 APOL4 apolipoprotein L4 2 2
MIRT707575 DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 2 2
MIRT708606 ZNF260 zinc finger protein 260 2 2
MIRT708859 TMSB4X thymosin beta 4, X-linked 2 2
MIRT709861 PDIK1L PDLIM1 interacting kinase 1 like 2 2
MIRT709987 RBM41 RNA binding motif protein 41 2 2
MIRT710098 KPNA5 karyopherin subunit alpha 5 2 2
MIRT710211 ENAH ENAH, actin regulator 2 2
MIRT710868 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2 2
MIRT710986 SUSD5 sushi domain containing 5 2 2
MIRT711460 RNF145 ring finger protein 145 2 2
MIRT712302 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT713609 SYTL4 synaptotagmin like 4 2 2
MIRT713789 MAK16 MAK16 homolog 2 2
MIRT715480 MYO9B myosin IXB 2 2
MIRT716328 POU5F1 POU class 5 homeobox 1 2 2
MIRT717252 TMEM246 transmembrane protein 246 2 2
MIRT718077 CLIC5 chloride intracellular channel 5 2 2
MIRT718463 EED embryonic ectoderm development 2 2
MIRT718645 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT718982 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT721078 RPS9 ribosomal protein S9 2 2
MIRT721419 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT721863 CENPJ centromere protein J 2 2
MIRT722492 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT723391 CALN1 calneuron 1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-412 Gemcitabine approved 60750 Northern blot Mz-ChA-1 human cholangiocarcinoma cell lines 16762633 2006 down-regulated
miR-412 Progesterone approved 5994 Microarray Breast cancer 22330642 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-412 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-412 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-412-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (RKO)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (HCT-116)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved sensitive High Anaplastic Thyroid Cancer tissue
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM43)
hsa-miR-412-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-412-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-412-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR1)
hsa-miR-412-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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