pre-miRNA Information
pre-miRNA hsa-mir-3622b   
Genomic Coordinates chr8: 27701673 - 27701767
Description Homo sapiens miR-3622b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3622b-3p
Sequence 58| UCACCUGAGCUCCCGUGCCUG |78
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1232922758 2 dbSNP
rs530939348 5 dbSNP
rs1439657384 10 dbSNP
rs1157333896 12 dbSNP
rs66683138 14 dbSNP
rs1044808718 15 dbSNP
rs946438979 19 dbSNP
rs551845360 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ALDH1B1   
Synonyms ALDH5, ALDHX
Description aldehyde dehydrogenase 1 family member B1
Transcript NM_000692   
Expression
Putative miRNA Targets on ALDH1B1
3'UTR of ALDH1B1
(miRNA target sites are highlighted)
>ALDH1B1|NM_000692|3'UTR
   1 GAGCAGCTGTCAGGGAGGCCCAGTCACAGTCCAGCAATTCCACAACCACCTTGACGAATGCTTGCCAAGCTGTTTTAAAG
  81 CCAAGAACACCCTTTCTTTGTTCCAAATTAACTCTTAGAAGAAACCCCACAAATAAAGCAATTCAATCAAGGCTGTTCTA
 161 TTTAAATCAGAGATGGGGACCAGGCTCAGAGTTCTACCTATCTAACCCCCAACCACAGCCCCCTTGGTGGCCCATGAGTT
 241 GCTTCCATGAAATCTTAGGAGTCTCTGGAGGACAGATTAAAAACCAGTGATCTGTAATTTGTAGCTCTTCCTGCTGATCC
 321 AAGGACTTTCCCATGGGTGCGCTTGATGGTTTAGTGGATCGACTCAACTCAGAACACAAGCTTGGAAAGTGTTAGGGGTT
 401 TTGAACTAGGTGGATACTAAATCTCGGCCCCACTCTTCATTGGCTTAACCTAAAAACCAGAGGTGCTTTTCCTTGTCTGT
 481 GTGCCAGTTGCTGGCTGTTTTAGTTGCTTGCCCTTCATTTTGCTACTGATTTTCCTTAATTTGTGGGAAGGAGTAGGCAA
 561 AGAATATGCTTACATGATTACACCTGTAAAGTAAGCCCAAACATCCCAAATGTCCGTCAACTGATGAGTGGATTAATAAA
 641 ATGTTTCCATGGAATATTCCTTGGATTACTCAGCCATAAAAAGGAATGAAGTACTGACACATGCTGTGACATCAGTGAAC
 721 CCTGAAAACATCCTTCTCAGTGAAACAAGCCAGAGAGATGTACAAGGCTACAGACTGTATGATTCCATTTATATGAAATA
 801 TACATACTAGGCAAATCCATGGAGATGGAACATAGATTAGTGGTTGCCAGGGGATAGAGGAGTAATTGTTAGTGGGCATG
 881 GGATTTGTTTTTGGGAGGTTTTGAAAATGTTCTGGAGTTGAACAATAGTAATGGTTGCATGATTTGGTAAAAATACTAAA
 961 AACTATGGAATTGTTTAATTATGGTATATGAATTAATTTCTTTCTTTTTTTCTTTTTTTTTTTTTTTTTTGACACGGAGT
1041 CTCACTCTGTCGCCCAGGCTGGAGTGCAGTGGTGTGATCTCGTCTCACTGCAACCTCCGCCTCCCAGATTCAAGCGATTC
1121 TCCTGTCTCAGCCTCCTGAGTAGCTGGGATTATAGGTACATGCCATCACACCTGGCTAATTTTTGTATTTTTAGTAGAGA
1201 TGAGGTTTCACCATTTTGGCCAGGCTGATCTTGAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCT
1281 GGGATTACAGGTGGGAGCCACAACACCCGGCCATGAATTAACTCCGTTAAAAAATAAACGTATACATTCTGTGAGCAAAT
1361 CCAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' guccGUGCCCUCGAGUCCACu 5'
              | |  || |||||||| 
Target 5' tgaaCTCCTGACCTCAGGTGa 3'
1232 - 1252 153.00 -16.90
2
miRNA  3' gucCGUG-CCCUCGAGUCCACu 5'
             |::| |||| : |||||| 
Target 5' aaaGTGCTGGGATTACAGGTGg 3'
1273 - 1294 130.00 -19.70
3
miRNA  3' guccGUGCCCUCGAGUCCACu 5'
              ||:|  | ||:||| | 
Target 5' cttcCATGAAATCTTAGGAGt 3'
242 - 262 109.00 -9.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30523540 8 COSMIC
COSN31594125 10 COSMIC
COSN30205322 28 COSMIC
COSN31489604 60 COSMIC
COSN30107960 86 COSMIC
COSN31958829 122 COSMIC
COSN31516808 137 COSMIC
COSN24933086 144 COSMIC
COSN26554646 153 COSMIC
COSN30124325 170 COSMIC
COSN23013073 224 COSMIC
COSN30511817 232 COSMIC
COSN26642508 285 COSMIC
COSN31484436 415 COSMIC
COSN31514821 480 COSMIC
COSN9283374 539 COSMIC
COSN25422547 544 COSMIC
COSN30529131 567 COSMIC
COSN26573674 617 COSMIC
COSN31539373 684 COSMIC
COSN30118160 747 COSMIC
COSN28745776 852 COSMIC
COSN9318140 872 COSMIC
COSN31518924 873 COSMIC
COSN31644372 889 COSMIC
COSN30113986 991 COSMIC
COSN30125379 1017 COSMIC
COSN31556823 1018 COSMIC
COSN31518604 1024 COSMIC
COSN30124662 1026 COSMIC
COSN30115787 1115 COSMIC
COSN23984056 1212 COSMIC
COSN31556522 1301 COSMIC
COSN21558606 1302 COSMIC
COSN31513202 1340 COSMIC
COSN29463362 1343 COSMIC
rs3043 57 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1352826079 2 dbSNP
rs1408079782 11 dbSNP
rs1442232227 18 dbSNP
rs781215962 22 dbSNP
rs373275057 28 dbSNP
rs577688529 33 dbSNP
rs375838585 34 dbSNP
rs749152325 35 dbSNP
rs375079128 38 dbSNP
rs1275302309 43 dbSNP
rs370480998 50 dbSNP
rs1488050111 51 dbSNP
rs1292776312 55 dbSNP
rs886586107 56 dbSNP
rs3043 57 dbSNP
rs977694011 60 dbSNP
rs538385101 62 dbSNP
rs556473929 65 dbSNP
rs188012654 73 dbSNP
rs539319186 80 dbSNP
rs780294924 83 dbSNP
rs1037830985 88 dbSNP
rs747070098 89 dbSNP
rs993936471 91 dbSNP
rs992073038 92 dbSNP
rs554479228 109 dbSNP
rs1192755316 111 dbSNP
rs1480635110 119 dbSNP
rs572793302 127 dbSNP
rs1201823193 129 dbSNP
rs977925609 133 dbSNP
rs768783100 136 dbSNP
rs141706677 153 dbSNP
rs1309706707 157 dbSNP
rs561728329 160 dbSNP
rs974931066 178 dbSNP
rs958533477 185 dbSNP
rs1324688986 191 dbSNP
rs573644502 192 dbSNP
rs1384669199 198 dbSNP
rs1366309029 204 dbSNP
rs1272651017 208 dbSNP
rs1298185049 213 dbSNP
rs1011277823 215 dbSNP
rs1443736589 216 dbSNP
rs1398103445 219 dbSNP
rs1169848457 221 dbSNP
rs777192229 224 dbSNP
rs753142944 231 dbSNP
rs1244843396 233 dbSNP
rs1266762524 248 dbSNP
rs1177919338 258 dbSNP
rs1481651044 267 dbSNP
rs1236936338 272 dbSNP
rs977514915 281 dbSNP
rs1442742627 291 dbSNP
rs1265325712 294 dbSNP
rs770350319 297 dbSNP
rs1182958937 298 dbSNP
rs1311318260 303 dbSNP
rs1307246306 304 dbSNP
rs922976282 308 dbSNP
rs1225023481 310 dbSNP
rs955095644 327 dbSNP
rs1330631810 330 dbSNP
rs544328428 331 dbSNP
rs1463388420 341 dbSNP
rs562520466 342 dbSNP
rs763410513 348 dbSNP
rs1395324534 356 dbSNP
rs940825008 361 dbSNP
rs767251754 362 dbSNP
rs899364964 364 dbSNP
rs1414481699 371 dbSNP
rs1462106160 372 dbSNP
rs910722695 376 dbSNP
rs1381174330 377 dbSNP
rs1483118135 389 dbSNP
rs11555706 395 dbSNP
rs942211288 412 dbSNP
rs1037777947 426 dbSNP
rs919362782 427 dbSNP
rs1350895843 429 dbSNP
rs192477909 432 dbSNP
rs929427924 433 dbSNP
rs775336343 435 dbSNP
rs553739253 439 dbSNP
rs1384984425 441 dbSNP
rs1310466808 442 dbSNP
rs551174430 451 dbSNP
rs1014280225 452 dbSNP
rs760254105 459 dbSNP
rs1289699521 475 dbSNP
rs1421699768 484 dbSNP
rs1358710559 489 dbSNP
rs140886162 497 dbSNP
rs1024866023 523 dbSNP
rs1445303748 526 dbSNP
rs1328549173 527 dbSNP
rs1003162730 535 dbSNP
rs1225707309 544 dbSNP
rs1269769221 545 dbSNP
rs1055676797 554 dbSNP
rs1346006410 558 dbSNP
rs1202207972 562 dbSNP
rs894303801 604 dbSNP
rs1011392166 616 dbSNP
rs7859877 617 dbSNP
rs967504161 621 dbSNP
rs1177291866 633 dbSNP
rs978043411 634 dbSNP
rs998624506 644 dbSNP
rs777612907 652 dbSNP
rs1284859059 653 dbSNP
rs1222656108 665 dbSNP
rs1202947583 668 dbSNP
rs1248643172 673 dbSNP
rs1263653626 687 dbSNP
rs1243924442 689 dbSNP
rs1326825942 697 dbSNP
rs1430008715 702 dbSNP
rs749604247 707 dbSNP
rs1190769913 711 dbSNP
rs753399596 722 dbSNP
rs757091210 731 dbSNP
rs958140500 738 dbSNP
rs1478169429 739 dbSNP
rs1162005500 740 dbSNP
rs1457796592 752 dbSNP
rs1373995731 759 dbSNP
rs1178192611 763 dbSNP
rs974500218 764 dbSNP
rs1262077572 769 dbSNP
rs921690770 774 dbSNP
rs954442204 778 dbSNP
rs1264592825 787 dbSNP
rs1209179666 792 dbSNP
rs1403236585 793 dbSNP
rs1252993674 794 dbSNP
rs932967132 802 dbSNP
rs1317039777 816 dbSNP
rs1468885291 817 dbSNP
rs1277842241 818 dbSNP
rs1405731064 826 dbSNP
rs986375148 827 dbSNP
rs1321601082 833 dbSNP
rs907585977 841 dbSNP
rs10758495 852 dbSNP
rs1173424643 853 dbSNP
rs74363930 855 dbSNP
rs973547168 856 dbSNP
rs567694558 864 dbSNP
rs919443962 865 dbSNP
rs80291678 867 dbSNP
rs1281685170 871 dbSNP
rs1437883744 875 dbSNP
rs1322914117 879 dbSNP
rs1055857942 881 dbSNP
rs1196638418 882 dbSNP
rs1229087499 889 dbSNP
rs1263468669 896 dbSNP
rs1220042763 898 dbSNP
rs1347481705 899 dbSNP
rs1273284443 904 dbSNP
rs1232682615 913 dbSNP
rs75307558 924 dbSNP
rs780268304 938 dbSNP
rs184420368 940 dbSNP
rs1445148373 951 dbSNP
rs1400044010 955 dbSNP
rs1203112385 956 dbSNP
rs755230625 959 dbSNP
rs1416507843 963 dbSNP
rs1422684942 971 dbSNP
rs1020295325 974 dbSNP
rs938046810 975 dbSNP
rs1381578113 985 dbSNP
rs1176720515 987 dbSNP
rs1438938117 991 dbSNP
rs903219688 997 dbSNP
rs1212039998 999 dbSNP
rs1200045023 1001 dbSNP
rs889620081 1001 dbSNP
rs1238613481 1005 dbSNP
rs1376495811 1005 dbSNP
rs1376895499 1005 dbSNP
rs201461195 1005 dbSNP
rs10973781 1006 dbSNP
rs1450685001 1006 dbSNP
rs1357745054 1009 dbSNP
rs1479792294 1010 dbSNP
rs1361905807 1011 dbSNP
rs1400872071 1011 dbSNP
rs894420130 1012 dbSNP
rs1032697291 1013 dbSNP
rs1187123229 1013 dbSNP
rs1236631655 1013 dbSNP
rs1437091273 1013 dbSNP
rs1471704018 1013 dbSNP
rs374954384 1013 dbSNP
rs544033194 1013 dbSNP
rs1214607363 1014 dbSNP
rs1159288488 1015 dbSNP
rs1353038888 1015 dbSNP
rs1366017545 1016 dbSNP
rs1011465795 1017 dbSNP
rs1377455134 1017 dbSNP
rs1042837129 1018 dbSNP
rs1400990613 1018 dbSNP
rs1342054489 1019 dbSNP
rs974989650 1019 dbSNP
rs1365613535 1020 dbSNP
rs1403479211 1021 dbSNP
rs1288851238 1022 dbSNP
rs1028701636 1023 dbSNP
rs1478672140 1027 dbSNP
rs1407218500 1031 dbSNP
rs1477957675 1032 dbSNP
rs1345128391 1033 dbSNP
rs1410459121 1034 dbSNP
rs371403072 1036 dbSNP
rs1224441257 1037 dbSNP
rs1320513336 1039 dbSNP
rs1289779010 1040 dbSNP
rs1219682493 1048 dbSNP
rs552231400 1052 dbSNP
rs1236765253 1053 dbSNP
rs1398948157 1060 dbSNP
rs903019612 1066 dbSNP
rs987215070 1068 dbSNP
rs1359879972 1069 dbSNP
rs1349285411 1074 dbSNP
rs1224464707 1075 dbSNP
rs367901343 1080 dbSNP
rs1490093590 1081 dbSNP
rs562915277 1082 dbSNP
rs1421146928 1083 dbSNP
rs1168813195 1090 dbSNP
rs1252025111 1096 dbSNP
rs189356666 1100 dbSNP
rs1426134316 1110 dbSNP
rs1193052748 1115 dbSNP
rs890105715 1116 dbSNP
rs1246674517 1117 dbSNP
rs1199770789 1126 dbSNP
rs1459385946 1126 dbSNP
rs1256492422 1133 dbSNP
rs1217637879 1135 dbSNP
rs1007257213 1136 dbSNP
rs1302939158 1144 dbSNP
rs1217016201 1150 dbSNP
rs1159015500 1151 dbSNP
rs1366239969 1156 dbSNP
rs1369556651 1162 dbSNP
rs1426880114 1164 dbSNP
rs1162083160 1167 dbSNP
rs1365143339 1169 dbSNP
rs907533497 1169 dbSNP
rs1410629177 1172 dbSNP
rs1300165739 1174 dbSNP
rs1397859049 1175 dbSNP
rs1330507146 1179 dbSNP
rs1017301697 1184 dbSNP
rs1466352271 1189 dbSNP
rs1360020457 1197 dbSNP
rs963597444 1199 dbSNP
rs1371259758 1204 dbSNP
rs536993017 1206 dbSNP
rs1390960131 1212 dbSNP
rs1424484633 1220 dbSNP
rs1179824654 1224 dbSNP
rs961708826 1225 dbSNP
rs1383468649 1236 dbSNP
rs1247849757 1239 dbSNP
rs972074401 1243 dbSNP
rs1289285371 1252 dbSNP
rs973656842 1254 dbSNP
rs1026754810 1257 dbSNP
rs866013293 1259 dbSNP
rs1252775796 1260 dbSNP
rs192713382 1261 dbSNP
rs920861363 1262 dbSNP
rs1374653658 1272 dbSNP
rs1308423073 1274 dbSNP
rs1396434049 1279 dbSNP
rs950950098 1293 dbSNP
rs1176142853 1294 dbSNP
rs1304826681 1298 dbSNP
rs1244236282 1301 dbSNP
rs1374926488 1303 dbSNP
rs937493239 1305 dbSNP
rs184720111 1308 dbSNP
rs188512699 1309 dbSNP
rs556187703 1310 dbSNP
rs1424782149 1313 dbSNP
rs1430863111 1314 dbSNP
rs1179762587 1317 dbSNP
rs577326295 1321 dbSNP
rs950107358 1326 dbSNP
rs116130231 1327 dbSNP
rs1352981852 1329 dbSNP
rs147066783 1336 dbSNP
rs138370036 1340 dbSNP
rs142361026 1341 dbSNP
rs113422984 1343 dbSNP
rs934542417 1345 dbSNP
rs1051934585 1346 dbSNP
rs1395232084 1349 dbSNP
rs1410230471 1352 dbSNP
rs1312913228 1355 dbSNP
rs1355124379 1356 dbSNP
rs1299004472 1360 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048188. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_ptb_knockdown ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' guccGUGCCCUCGAGUCCACu 5'
              | |  || |||||||| 
Target 5' ugaaCUCCUGACCUCAGGUGa 3'
6 - 26
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM4903829
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_a
Location of target site NM_000692 | 3UTR | CUCCUGACCUCAGGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903830
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / CTLTD_shCTL_b
Location of target site NM_000692 | 3UTR | CUCAGGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903831
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_a
Location of target site NM_000692 | 3UTR | AGGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_000692 | 3UTR | CUUGAACUCCUGACCUCAGGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_000692 | 3UTR | UUGAACUCCUGACCUCAGGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_000692 | 3UTR | UCUUGAACUCCUGACCUCAGGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_000692 | 3UTR | UCUUGAACUCCUGACCUCAGGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_000692 | 3UTR | CUUGAACUCCUGACCUCAGGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_000692 | 3UTR | CUUGAACUCCUGACCUCAGGUGAUCCACCCGCCUCAGCCUCCCAAAGUGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 10 for dataset GSM1048188
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_ptb_knockdown
Location of target site ENST00000377698.3 | 3UTR | GAUCUUGAACUCCUGACCUCAGGUGAUCCAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
THCA 0.072 0.44 0.000 0.5 7 Click to see details
THCA 0.072 0.44 0.000 0.5 7 Click to see details
THCA 0.072 0.44 0.000 0.5 7 Click to see details
THCA 0.072 0.44 0.000 0.5 7 Click to see details
THCA 0.072 0.44 0.000 0.5 7 Click to see details
THCA 0.072 0.44 0.000 0.5 7 Click to see details
102 hsa-miR-3622b-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT076713 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT080212 PRKACB protein kinase cAMP-activated catalytic subunit beta 2 2
MIRT081398 GTPBP3 GTP binding protein 3, mitochondrial 2 2
MIRT107158 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT254071 BACH1 BTB domain and CNC homolog 1 2 2
MIRT409790 FOXO3 forkhead box O3 2 2
MIRT448679 MAPK9 mitogen-activated protein kinase 9 2 2
MIRT450206 ABHD15 abhydrolase domain containing 15 2 2
MIRT486621 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT489267 TTLL1 tubulin tyrosine ligase like 1 2 2
MIRT493117 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 4
MIRT494570 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497395 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT504900 CCDC86 coiled-coil domain containing 86 2 2
MIRT505192 USP46 ubiquitin specific peptidase 46 2 4
MIRT506522 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 6
MIRT508162 ABCC5 ATP binding cassette subfamily C member 5 2 8
MIRT508545 PARVG parvin gamma 2 4
MIRT509850 BIRC5 baculoviral IAP repeat containing 5 2 6
MIRT510088 PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 2 8
MIRT512094 CRK CRK proto-oncogene, adaptor protein 2 4
MIRT515381 RPL7 ribosomal protein L7 2 2
MIRT519176 SCO1 SCO1, cytochrome c oxidase assembly protein 2 2
MIRT519964 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT522292 NKAP NFKB activating protein 2 2
MIRT523160 HMGB2 high mobility group box 2 2 4
MIRT525314 FANCA Fanconi anemia complementation group A 2 2
MIRT528194 PLEKHM2 pleckstrin homology and RUN domain containing M2 2 2
MIRT532885 ZNF451 zinc finger protein 451 2 2
MIRT538209 CYR61 cysteine rich angiogenic inducer 61 2 2
MIRT539497 ACTN4 actinin alpha 4 2 2
MIRT554600 RRAGC Ras related GTP binding C 2 2
MIRT562444 DCTN6 dynactin subunit 6 2 2
MIRT562748 AOC3 amine oxidase, copper containing 3 2 2
MIRT565798 SEC14L5 SEC14 like lipid binding 5 2 2
MIRT565838 SCML2 Scm polycomb group protein like 2 2 2
MIRT566072 RCC2 regulator of chromosome condensation 2 2 2
MIRT566104 RBPJ recombination signal binding protein for immunoglobulin kappa J region 2 2
MIRT572407 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT576198 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576313 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576651 Mill2 MHC I like leukocyte 2 1 1
MIRT576859 Socs6 suppressor of cytokine signaling 6 2 2
MIRT606819 BICD2 BICD cargo adaptor 2 2 2
MIRT610738 NUDT16 nudix hydrolase 16 2 4
MIRT614798 RORA RAR related orphan receptor A 2 2
MIRT619006 NTMT1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 2 2
MIRT619420 NOS1AP nitric oxide synthase 1 adaptor protein 2 2
MIRT620405 MYO1H myosin IH 2 2
MIRT624869 ABHD13 abhydrolase domain containing 13 2 2
MIRT633527 ZFP30 ZFP30 zinc finger protein 2 2
MIRT633927 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT636611 CLIC5 chloride intracellular channel 5 2 2
MIRT640616 MIOX myo-inositol oxygenase 2 2
MIRT642605 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT644624 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT655113 PHLDA3 pleckstrin homology like domain family A member 3 2 2
MIRT658976 DNAJB5 DnaJ heat shock protein family (Hsp40) member B5 2 4
MIRT661495 CHMP1B charged multivesicular body protein 1B 2 2
MIRT662996 TMEM59 transmembrane protein 59 2 2
MIRT663075 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT665405 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT666106 SSR1 signal sequence receptor subunit 1 2 2
MIRT669562 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT670070 ZNF783 zinc finger family member 783 2 2
MIRT671192 ZNF891 zinc finger protein 891 2 2
MIRT675361 KLHL26 kelch like family member 26 2 2
MIRT678857 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT679443 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT684163 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT684543 ZNF460 zinc finger protein 460 2 2
MIRT684674 SLC2A11 solute carrier family 2 member 11 2 2
MIRT684971 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT686006 NEK4 NIMA related kinase 4 2 2
MIRT687758 KIAA1328 KIAA1328 2 2
MIRT688961 ATXN3 ataxin 3 2 2
MIRT689409 UQCR11 ubiquinol-cytochrome c reductase, complex III subunit XI 2 2
MIRT690001 MMP17 matrix metallopeptidase 17 2 2
MIRT690165 ELP3 elongator acetyltransferase complex subunit 3 2 2
MIRT690202 C5orf45 MRN complex interacting protein 2 2
MIRT690477 ZNF33A zinc finger protein 33A 2 2
MIRT690566 MICA MHC class I polypeptide-related sequence A 2 2
MIRT692160 C10orf111 chromosome 10 open reading frame 111 2 2
MIRT693430 PLGLB2 plasminogen-like B2 2 2
MIRT693547 ZNF708 zinc finger protein 708 2 2
MIRT693697 PLGLB1 plasminogen-like B1 2 2
MIRT695006 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT698525 TFRC transferrin receptor 2 2
MIRT699574 SIKE1 suppressor of IKBKE 1 2 2
MIRT703446 FYTTD1 forty-two-three domain containing 1 2 2
MIRT704397 CTSS cathepsin S 2 2
MIRT704485 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT709822 STPG1 sperm tail PG-rich repeat containing 1 2 2
MIRT710859 COQ7 coenzyme Q7, hydroxylase 2 2
MIRT711893 INSIG2 insulin induced gene 2 2 2
MIRT713796 CPLX2 complexin 2 2 2
MIRT718800 C1GALT1C1 C1GALT1 specific chaperone 1 2 2
MIRT719501 SEC24B SEC24 homolog B, COPII coat complex component 2 2
MIRT719722 PDE6B phosphodiesterase 6B 2 2
MIRT722204 URM1 ubiquitin related modifier 1 2 2
MIRT723523 CLPTM1L CLPTM1 like 2 2
MIRT725471 GRAP2 GRB2-related adaptor protein 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3622b-3p Platinum 23939 sensitive tissue
hsa-miR-3622b-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3622b-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-3622b-3p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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