pre-miRNA Information
pre-miRNA hsa-mir-3622a   
Genomic Coordinates chr8: 27701677 - 27701759
Description Homo sapiens miR-3622a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3622a-5p
Sequence 14| CAGGCACGGGAGCUCAGGUGAG |35
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 2 8 + 27701691 29233923 MiREDiBase
A-to-I 6 8 + 27701695 29233923 MiREDiBase
A-to-I 16 8 + 27701705 28550310, 29233923 MiREDiBase
A-to-I 21 8 + 27701710 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs551845360 1 dbSNP
rs946438979 3 dbSNP
rs1044808718 7 dbSNP
rs66683138 8 dbSNP
rs1157333896 10 dbSNP
rs1439657384 12 dbSNP
rs530939348 17 dbSNP
rs1232922758 20 dbSNP
rs1448152954 22 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol C9orf64   
Synonyms -
Description chromosome 9 open reading frame 64
Transcript NM_032307   
Expression
Putative miRNA Targets on C9orf64
3'UTR of C9orf64
(miRNA target sites are highlighted)
>C9orf64|NM_032307|3'UTR
   1 CCTCAAGTGTAAACTGATCCAAAGAAAACCCCCTGCGTTTTATATCATATCATCTGTACAGTTTTGCTTTGATATTTAGA
  81 GAACATGATCGAGGTTATAGGAAATTGATTGCCCATTCTCACTTGAAAAATACTTCCTAGGCCGGGCACAGTGGTTTATG
 161 CCTGTAATCCCAGCACTGTGGGAGGCTGAGGCGGGTGGATCATCTGAGGTCAGGAGTTTGAGACCACCTGGCCAACATGG
 241 TGAAACCCCATCTCTACTAAAAATACAAAATTAGCTGGGCGTGGTGGCACGTGCCTGTAATCCCAGTTACTTGGGAGGCT
 321 GAGGCAAGAGAATCGCTTGAACTCAGAAGGTGGAGGTTGCAGTGAGGCGAGATTAGGCCATTGCACTCCAGCCTCAGCAA
 401 CAAGAGTGAAACTTTGTCTCAAAAAACAACAACAACAACAACAACAACAACAAAACTTCCTAGGCCAGATGTGGTGGCTC
 481 ATATGTATAATCTTAGCACTTTGGGAGGCCAAGGCAGGAGGATTGCTTGAGGCGAGGAGTTCAAGACCAGCCTAGGCAAC
 561 ATAGGGAGACCCCCATCTCTACAAAAATTTAAAAATTAGCCTAGCATGGTGGCACGCTCTGTAATCCCAAATACGCGGTA
 641 GGCTGAGGCTGAGGAGGGTGGATTGCTTGAGCCCAGGGGTTTGAGGCTGCAGTGAGCCACAGTCACGCCACTGCATTCTA
 721 TCCTGGGCAACAGATGGAGACCTTGTCTCAAAAAAAAAAAATTCCTGACATCGCTATGTATTCCCAACTTTATCATTTGT
 801 CTGCCTGTTTAGTTTTGACTTATGTTTTTTTTTTTTCCCCCCTGTGGACATGTAGTTGACGGAAATCGTGAAGGAACTTT
 881 AATATTTTATTTAAATTTCCCAAAACTAATCATGCCTTATGTGACTAATCTTCAGTGATAATATTTCATCTACTGATATA
 961 TTTTCTTGAGGTGTGTAATTTTCAGTATACCTTAATCATTTGGTATAAAAAAGAGAGAGGTTTTTGATATATGAATGCTG
1041 TTCTTGTAAAAATCAATCTTGACACTTTATTTTAAACTTTTTATTGGTAATGACAGTGGGTTTTGTACATCATGATTTTC
1121 AATTTAGGATATCTGTCTAATTTGTTTTTTCAGAGTAACTATATTGGAATTCAATAAAAATATTCAAAATTTTTCTTAAA
1201 AAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' gaGUGGACUCG----A--GGGCACGGAc 5'
            :| |||:||    |  | ||||||| 
Target 5' atTAGCTGGGCGTGGTGGCACGTGCCTg 3'
270 - 297 152.00 -24.40
2
miRNA  3' gaguGGACUCGA-GGGCACGGAc 5'
              ||  | ||  :| ||||| 
Target 5' tttcCCAAAACTAATCATGCCTt 3'
896 - 918 114.00 -8.50
3
miRNA  3' gagUGGACUCG--AGGGCACGGAc 5'
             ||:| | |  |: : ||||| 
Target 5' ccaACTTTATCATTTGTCTGCCTg 3'
784 - 807 105.00 -14.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31596868 12 COSMIC
COSN26968849 36 COSMIC
COSN30178021 96 COSMIC
COSN6397146 104 COSMIC
COSN30163469 105 COSMIC
COSN20106299 750 COSMIC
COSN1381970 824 COSMIC
COSN23426663 837 COSMIC
COSN32061383 837 COSMIC
COSN24109179 896 COSMIC
COSN2330899 924 COSMIC
COSN20324478 937 COSMIC
rs3180887 837 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs761165278 7 dbSNP
rs1296030814 11 dbSNP
rs775107283 13 dbSNP
rs1381369464 14 dbSNP
rs1163382037 25 dbSNP
rs771651288 28 dbSNP
rs1425791861 29 dbSNP
rs549187493 31 dbSNP
rs1182941494 32 dbSNP
rs773814545 33 dbSNP
rs367873416 36 dbSNP
rs78559080 37 dbSNP
rs369391831 44 dbSNP
rs911701307 47 dbSNP
rs1004838043 48 dbSNP
rs766264009 49 dbSNP
rs1314837198 50 dbSNP
rs988701173 52 dbSNP
rs1365889096 54 dbSNP
rs1399833851 61 dbSNP
rs886319148 70 dbSNP
rs1182078074 85 dbSNP
rs1027445296 88 dbSNP
rs72749125 90 dbSNP
rs532162986 91 dbSNP
rs1216318990 97 dbSNP
rs1277161245 102 dbSNP
rs898595974 106 dbSNP
rs1243904047 137 dbSNP
rs1185561796 138 dbSNP
rs375356352 143 dbSNP
rs1045154977 144 dbSNP
rs1254585176 146 dbSNP
rs1483135085 147 dbSNP
rs948116463 158 dbSNP
rs1217900222 166 dbSNP
rs1266052946 169 dbSNP
rs1445350974 170 dbSNP
rs1282114158 174 dbSNP
rs896523331 190 dbSNP
rs564712367 192 dbSNP
rs146340115 193 dbSNP
rs1375657372 196 dbSNP
rs1433940299 199 dbSNP
rs10115699 209 dbSNP
rs1013972758 220 dbSNP
rs1277483833 227 dbSNP
rs896007624 233 dbSNP
rs1243416457 236 dbSNP
rs747186214 237 dbSNP
rs979609543 249 dbSNP
rs1297000930 257 dbSNP
rs560922000 272 dbSNP
rs1381606012 280 dbSNP
rs946897146 281 dbSNP
rs1449667275 284 dbSNP
rs542849791 286 dbSNP
rs139712007 288 dbSNP
rs1004778207 290 dbSNP
rs1288751743 291 dbSNP
rs1318298409 303 dbSNP
rs888729431 305 dbSNP
rs974559659 317 dbSNP
rs1489510025 323 dbSNP
rs966180862 324 dbSNP
rs1162062591 325 dbSNP
rs1159075177 326 dbSNP
rs1424353611 330 dbSNP
rs911568068 333 dbSNP
rs983481538 334 dbSNP
rs1158311617 335 dbSNP
rs758594990 341 dbSNP
rs932703226 342 dbSNP
rs950652306 342 dbSNP
rs1027497581 345 dbSNP
rs1366522997 353 dbSNP
rs116175633 367 dbSNP
rs969887594 368 dbSNP
rs1023217314 369 dbSNP
rs988684514 380 dbSNP
rs1291312889 383 dbSNP
rs538534027 384 dbSNP
rs182448403 386 dbSNP
rs577995606 395 dbSNP
rs1265177536 398 dbSNP
rs755476024 404 dbSNP
rs1265053117 406 dbSNP
rs1458356545 407 dbSNP
rs1180774651 412 dbSNP
rs1056487195 414 dbSNP
rs1239714590 415 dbSNP
rs113052522 416 dbSNP
rs1176544387 419 dbSNP
rs999905030 424 dbSNP
rs1393137596 427 dbSNP
rs979050439 427 dbSNP
rs1292097957 430 dbSNP
rs191818165 432 dbSNP
rs1332962164 435 dbSNP
rs1375144537 438 dbSNP
rs1442011534 442 dbSNP
rs1229650610 444 dbSNP
rs1382017589 453 dbSNP
rs1227142205 454 dbSNP
rs1256473180 454 dbSNP
rs1318715884 454 dbSNP
rs1456265646 454 dbSNP
rs150964972 454 dbSNP
rs374992001 454 dbSNP
rs557874146 454 dbSNP
rs757170516 454 dbSNP
rs1203614913 463 dbSNP
rs902503397 467 dbSNP
rs969751374 471 dbSNP
rs1473713490 476 dbSNP
rs376567941 478 dbSNP
rs1416447797 481 dbSNP
rs1269111287 485 dbSNP
rs1477863717 495 dbSNP
rs1022616457 496 dbSNP
rs879023763 497 dbSNP
rs946951295 509 dbSNP
rs1409719303 514 dbSNP
rs959807906 515 dbSNP
rs1301832566 517 dbSNP
rs922130779 521 dbSNP
rs1015336060 522 dbSNP
rs1039580244 523 dbSNP
rs567424855 529 dbSNP
rs911605548 533 dbSNP
rs888605678 534 dbSNP
rs771888573 537 dbSNP
rs1408465995 548 dbSNP
rs1220061980 553 dbSNP
rs1418994755 560 dbSNP
rs1279010189 562 dbSNP
rs1048649966 568 dbSNP
rs950413757 571 dbSNP
rs1256794221 572 dbSNP
rs1168585390 574 dbSNP
rs1195263557 575 dbSNP
rs1476426433 575 dbSNP
rs1425767471 576 dbSNP
rs920243342 577 dbSNP
rs1197148574 580 dbSNP
rs1474851272 582 dbSNP
rs1490137855 583 dbSNP
rs899856584 586 dbSNP
rs973332505 588 dbSNP
rs969939877 591 dbSNP
rs1269356345 595 dbSNP
rs1041052255 615 dbSNP
rs1022804082 616 dbSNP
rs944023830 621 dbSNP
rs914027434 622 dbSNP
rs557295677 634 dbSNP
rs1234164624 635 dbSNP
rs934517844 636 dbSNP
rs754406073 637 dbSNP
rs1231873152 638 dbSNP
rs1035544196 658 dbSNP
rs188229495 661 dbSNP
rs1319348242 663 dbSNP
rs537294617 666 dbSNP
rs1354278422 674 dbSNP
rs902557617 685 dbSNP
rs1043739584 689 dbSNP
rs1011172591 692 dbSNP
rs948591462 699 dbSNP
rs1323653850 706 dbSNP
rs755713357 707 dbSNP
rs1039219517 711 dbSNP
rs1346654805 714 dbSNP
rs1477230241 720 dbSNP
rs1276982439 723 dbSNP
rs899049560 724 dbSNP
rs1422002733 726 dbSNP
rs1354229074 728 dbSNP
rs1329782588 731 dbSNP
rs1157397319 733 dbSNP
rs1384261139 735 dbSNP
rs1467282259 739 dbSNP
rs1403965715 742 dbSNP
rs915819070 743 dbSNP
rs1329608318 749 dbSNP
rs749939027 761 dbSNP
rs1258962792 762 dbSNP
rs1302354238 762 dbSNP
rs398011247 762 dbSNP
rs66577984 762 dbSNP
rs912048723 762 dbSNP
rs1349317957 766 dbSNP
rs1209962404 772 dbSNP
rs1047958696 773 dbSNP
rs757110428 776 dbSNP
rs569893816 781 dbSNP
rs1466826238 786 dbSNP
rs1480086556 787 dbSNP
rs1429830635 803 dbSNP
rs1192639344 806 dbSNP
rs1192716448 819 dbSNP
rs992519966 822 dbSNP
rs1231994235 823 dbSNP
rs1363783456 824 dbSNP
rs1458448544 825 dbSNP
rs1204751704 826 dbSNP
rs1458781872 828 dbSNP
rs1260744040 829 dbSNP
rs1461066963 829 dbSNP
rs929054266 832 dbSNP
rs1202416553 833 dbSNP
rs1332308662 834 dbSNP
rs1400759338 835 dbSNP
rs1491303779 836 dbSNP
rs369736576 836 dbSNP
rs1491342576 837 dbSNP
rs3180887 837 dbSNP
rs372684394 837 dbSNP
rs71657804 837 dbSNP
rs1194487384 838 dbSNP
rs1426036093 838 dbSNP
rs868362987 840 dbSNP
rs201810648 843 dbSNP
rs546606685 843 dbSNP
rs751030568 843 dbSNP
rs1190239617 844 dbSNP
rs1366729682 847 dbSNP
rs920294128 849 dbSNP
rs973008517 850 dbSNP
rs1474961282 853 dbSNP
rs1015386766 860 dbSNP
rs982904894 861 dbSNP
rs1222492660 867 dbSNP
rs112707385 868 dbSNP
rs1395532659 871 dbSNP
rs915785868 882 dbSNP
rs117355203 888 dbSNP
rs1336095779 895 dbSNP
rs900116192 902 dbSNP
rs1019821880 909 dbSNP
rs1449304421 913 dbSNP
rs1278413983 921 dbSNP
rs749241413 923 dbSNP
rs1380801220 927 dbSNP
rs1224816228 928 dbSNP
rs1251054615 930 dbSNP
rs1008216543 936 dbSNP
rs960168201 939 dbSNP
rs1470311451 940 dbSNP
rs892431337 946 dbSNP
rs1485375544 952 dbSNP
rs761238819 960 dbSNP
rs552901408 965 dbSNP
rs1031503093 971 dbSNP
rs1426907531 987 dbSNP
rs35868378 987 dbSNP
rs1170020523 990 dbSNP
rs904370388 1003 dbSNP
rs978207178 1004 dbSNP
rs1407010241 1005 dbSNP
rs1043311306 1013 dbSNP
rs1373611192 1017 dbSNP
rs966752749 1019 dbSNP
rs948519629 1020 dbSNP
rs1298222069 1026 dbSNP
rs73469353 1030 dbSNP
rs1380103884 1032 dbSNP
rs1010886506 1033 dbSNP
rs191786352 1038 dbSNP
rs1018299375 1045 dbSNP
rs187437936 1046 dbSNP
rs575536512 1055 dbSNP
rs1461376820 1056 dbSNP
rs1218011037 1060 dbSNP
rs1265352482 1062 dbSNP
rs34194717 1083 dbSNP
rs982572146 1083 dbSNP
rs1214244252 1094 dbSNP
rs1186140574 1095 dbSNP
rs890657614 1099 dbSNP
rs952597620 1105 dbSNP
rs1316789798 1109 dbSNP
rs116295310 1115 dbSNP
rs1433963651 1121 dbSNP
rs1285425631 1137 dbSNP
rs1242680715 1139 dbSNP
rs1451074270 1145 dbSNP
rs1287904115 1152 dbSNP
rs1357569475 1161 dbSNP
rs1367919392 1162 dbSNP
rs929064144 1164 dbSNP
rs549018651 1165 dbSNP
rs1453556324 1181 dbSNP
rs1026715288 1182 dbSNP
rs1381401977 1190 dbSNP
rs762819801 1196 dbSNP
rs975592141 1198 dbSNP
rs1428593748 1201 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048188. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_ptb_knockdown ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' gaGUGGACUCG----A--GGGCACggac 5'
            :| |||:||    |  | ||||    
Target 5' auUAGCUGGGCGUGGUGGCACGUG---- 3'
5 - 28
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM4903832
Method / RBP HITS-CLIP / AGO
Cell line / Condition Human neurons / 124TD_shELAVL3_b
Location of target site NM_032307 | 3UTR | CUCUACUAAAAAUACAAAAUUAGCUGGGCGUGGUGGCACGUGCCUGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161238
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_032307 | 3UTR | CAACAUGGUGAAACCCCAUCUCUACUAAAAAUACAAAAUUAGCUGGGCGUGGUGGCACGUGCCUGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_032307 | 3UTR | GGCCAACAUGGUGAAACCCCAUCUCUACUAAAAAUACAAAAUUAGCUGGGCGUGGUGGCACGUGCCUGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_032307 | 3UTR | GUGAAACCCCAUCUCUACUAAAAAUACAAAAUUAGCUGGGCGUGGUGGCACGUGCCUGUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM1048188
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_ptb_knockdown
Location of target site ENST00000376344.3 | 3UTR | CAAAAUUAGCUGGGCGUGGUGGCACGUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
THCA -0.179 0.34 -0.190 0.33 8 Click to see details
THCA -0.179 0.34 -0.190 0.33 8 Click to see details
THCA -0.179 0.34 -0.190 0.33 8 Click to see details
THCA -0.179 0.34 -0.190 0.33 8 Click to see details
THCA -0.179 0.34 -0.190 0.33 8 Click to see details
THCA -0.179 0.34 -0.190 0.33 8 Click to see details
THCA -0.179 0.34 -0.190 0.33 8 Click to see details
61 hsa-miR-3622a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT166678 ZSWIM6 zinc finger SWIM-type containing 6 2 2
MIRT452081 ATP6V0B ATPase H+ transporting V0 subunit b 2 2
MIRT457039 S1PR3 sphingosine-1-phosphate receptor 3 2 2
MIRT471975 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT474065 LMNB2 lamin B2 2 2
MIRT475862 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT476191 GOLGA8A golgin A8 family member A 2 2
MIRT476521 GABRB1 gamma-aminobutyric acid type A receptor beta1 subunit 2 2
MIRT483046 C15orf52 chromosome 15 open reading frame 52 2 4
MIRT495541 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT495892 CLOCK clock circadian regulator 2 2
MIRT495992 LTBP2 latent transforming growth factor beta binding protein 2 2 2
MIRT496001 EMP1 epithelial membrane protein 1 2 2
MIRT496208 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT496427 ACTRT3 actin related protein T3 2 2
MIRT496438 ZNF704 zinc finger protein 704 2 2
MIRT496473 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT496555 TBX15 T-box 15 2 2
MIRT497202 CECR1 adenosine deaminase 2 2 2
MIRT507632 CREBZF CREB/ATF bZIP transcription factor 2 2
MIRT513377 MGAT4A mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A 2 2
MIRT523460 GOLGA8J golgin A8 family member J 2 2
MIRT523465 GOLGA8I golgin A8 family member I, pseudogene 1 1
MIRT526049 GMDS GDP-mannose 4,6-dehydratase 2 2
MIRT533122 YIPF4 Yip1 domain family member 4 2 2
MIRT534183 SLC8A1 solute carrier family 8 member A1 2 2
MIRT556618 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT563361 WHSC1 nuclear receptor binding SET domain protein 2 2 2
MIRT563868 FAM206A family with sequence similarity 206 member A 2 2
MIRT564360 PPWD1 peptidylprolyl isomerase domain and WD repeat containing 1 2 2
MIRT564661 ZNF449 zinc finger protein 449 2 2
MIRT564805 ZBTB33 zinc finger and BTB domain containing 33 2 2
MIRT564867 ZBED3 zinc finger BED-type containing 3 2 2
MIRT565340 TMEM104 transmembrane protein 104 2 2
MIRT566439 PHF16 jade family PHD finger 3 2 2
MIRT567587 FCHSD2 FCH and double SH3 domains 2 2 2
MIRT569597 C3orf62 chromosome 3 open reading frame 62 2 2
MIRT569700 FMNL3 formin like 3 2 2
MIRT575957 Nanos1 nanos homolog 1 (Drosophila) 2 3
MIRT576516 Slc35e2 solute carrier family 35, member E2 2 2
MIRT608480 RRP36 ribosomal RNA processing 36 2 2
MIRT614335 NANOS1 nanos C2HC-type zinc finger 1 2 3
MIRT630816 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT631708 C1QTNF6 C1q and TNF related 6 2 2
MIRT632369 SRRD SRR1 domain containing 2 2
MIRT633471 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT634478 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 2
MIRT667336 MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like 2 2
MIRT667654 LFNG LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase 2 2
MIRT671046 SS18 SS18, nBAF chromatin remodeling complex subunit 2 2
MIRT672823 VEZT vezatin, adherens junctions transmembrane protein 2 2
MIRT673049 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT673435 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT676096 DPP9 dipeptidyl peptidase 9 2 2
MIRT678059 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT679783 GOLGA2 golgin A2 2 2
MIRT684219 C9orf64 chromosome 9 open reading frame 64 2 2
MIRT697642 WRN Werner syndrome RecQ like helicase 2 2
MIRT706595 C1RL complement C1r subcomponent like 2 2
MIRT706603 CCS copper chaperone for superoxide dismutase 2 2
MIRT717647 HLX H2.0 like homeobox 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-3622a Doxorubicin 31703 NSC123127 approved resistant High Hepatocellular Carcinoma cell line (HepG2)
hsa-mir-3622a Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-miR-3622a-5p Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-3622a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-3622a-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-3622a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3622a-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-3622a-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-3622a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-3622a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3622a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-3622a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-3622a-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR3)
hsa-miR-3622a-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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