pre-miRNA Information
pre-miRNA hsa-mir-4433a   
Genomic Coordinates chr2: 64340759 - 64340839
Description Homo sapiens miR-4433a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4433a-3p
Sequence 51| ACAGGAGUGGGGGUGGGACAU |71
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs751480515 9 dbSNP
rs557760377 15 dbSNP
rs1479580865 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol C1orf174   
Synonyms -
Description chromosome 1 open reading frame 174
Transcript NM_207356   
Expression
Putative miRNA Targets on C1orf174
3'UTR of C1orf174
(miRNA target sites are highlighted)
>C1orf174|NM_207356|3'UTR
   1 GGGCCATACAAAATAATGTCCTTGAGTATTTAGTACCATTAACAATTTGACAATTTAGCACATTACAAGATTTATATAAA
  81 ATGTATCTCCAAGAGAATGTCTTAATCAAACTTCAGAACTGACCCATCTAAGTCAATAGTGCAAAGCACCCAATACCTGT
 161 GGAGGATGTACTCATGGGAACTAAAACTCAAACCATCTTTGAGGTTGCAAAGCTGCTGTACTGTGCCAATGTCCTTTCTT
 241 TTTTTTTTTTTTTTTTTTTCCTTGGAGACAGAGTTTCTCTCTTGTCGCCCAGGCTGGAGTGCAATGGCGCAATCTCGGCT
 321 CACTGCAACCTCCACCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATACACCA
 401 CCACACCCAGCTAGTTTTTGTATTATTAGTAGACACGGGGGTTTCTCCACGTTGGCCAGGCTGGTCTCAAACTCCTGACC
 481 TCGTGATACGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGCGAGCCACCATGCCCGGCCAGTGTCCTTTCTTA
 561 TACACGTACATACATGATGATGGCTTGAGTCAGCTGCAGGGCAGTGGGCTTAATGAGAGGGATCTTTGTAAAGACAGCTC
 641 TTCACTTCAGCTCAGTAGCTTTGGTCATAGGCAAGTTTGTTTTCCATTATCATAATTTGATGATTCTTGTGATGAATTCA
 721 ATGCTAGTTCTTAAAGAACTCTTTTATTTCTGTATGTGGAGCTAATGTTTACCTTGGAAATTTTGCAAAATACATGTAAG
 801 AAAGAAATAAAATATATTTTGAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uaCAGGGUGGGGGUGAGGACa 5'
            |||:||     ||||||| 
Target 5' tgGTCTCA----AACTCCTGa 3'
462 - 478 149.00 -18.20
2
miRNA  3' uacAGGGUGGGGGU-GAGGACa 5'
             | | |||:||| |||||| 
Target 5' cacTGCAACCTCCACCTCCTGg 3'
321 - 342 138.00 -20.90
3
miRNA  3' uacAGGGUGGGG-GUGAGGACa 5'
             |||::||:|   |||||| 
Target 5' ttcTCCTGCCTCAGCCTCCTGa 3'
353 - 374 130.00 -20.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN24298194 21 COSMIC
COSN30749529 35 COSMIC
COSN30605240 52 COSMIC
COSN31522298 66 COSMIC
COSN30166199 82 COSMIC
COSN26664310 90 COSMIC
COSN31506388 108 COSMIC
COSN20073986 121 COSMIC
COSN31595833 148 COSMIC
COSN31518662 159 COSMIC
COSN28675333 166 COSMIC
COSN31588358 213 COSMIC
COSN8468557 219 COSMIC
COSN29266399 239 COSMIC
COSN28288544 565 COSMIC
COSN24328882 579 COSMIC
COSN6455219 762 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs147888031 2 dbSNP
rs769441049 4 dbSNP
rs746319968 6 dbSNP
rs1290650101 8 dbSNP
rs1230316419 23 dbSNP
rs1354518204 24 dbSNP
rs1362619989 33 dbSNP
rs763043878 40 dbSNP
rs781613573 45 dbSNP
rs757626626 51 dbSNP
rs193046938 53 dbSNP
rs1056595276 58 dbSNP
rs1360924001 64 dbSNP
rs1190456489 68 dbSNP
rs1429294080 70 dbSNP
rs1388525895 75 dbSNP
rs1170919319 82 dbSNP
rs971586471 83 dbSNP
rs1446912978 87 dbSNP
rs1258952319 90 dbSNP
rs1211180412 99 dbSNP
rs1482549720 101 dbSNP
rs1272042550 110 dbSNP
rs1229416851 114 dbSNP
rs78669801 120 dbSNP
rs1311930043 122 dbSNP
rs1226498281 124 dbSNP
rs562794426 135 dbSNP
rs1313612686 136 dbSNP
rs1409250412 137 dbSNP
rs887872931 140 dbSNP
rs1037266851 145 dbSNP
rs188725789 153 dbSNP
rs773950399 157 dbSNP
rs10909819 166 dbSNP
rs1040351879 168 dbSNP
rs1426020553 182 dbSNP
rs1419178762 185 dbSNP
rs944615352 188 dbSNP
rs10797351 189 dbSNP
rs183261237 195 dbSNP
rs574973112 196 dbSNP
rs1480855120 197 dbSNP
rs1318816199 201 dbSNP
rs946555885 212 dbSNP
rs1336909483 218 dbSNP
rs555644797 220 dbSNP
rs955882607 235 dbSNP
rs201613600 238 dbSNP
rs1348646814 239 dbSNP
rs371467667 239 dbSNP
rs4075975 239 dbSNP
rs368609846 240 dbSNP
rs1390489492 242 dbSNP
rs1292194811 243 dbSNP
rs1395932191 255 dbSNP
rs924418439 256 dbSNP
rs1456257012 257 dbSNP
rs1461616750 258 dbSNP
rs978716988 259 dbSNP
rs1189320444 260 dbSNP
rs1207956984 260 dbSNP
rs1266191764 260 dbSNP
rs1327200445 260 dbSNP
rs1469639455 260 dbSNP
rs1491340921 260 dbSNP
rs59405380 260 dbSNP
rs758847217 260 dbSNP
rs776329211 260 dbSNP
rs969008872 260 dbSNP
rs1491138248 261 dbSNP
rs1372101813 262 dbSNP
rs1474753980 265 dbSNP
rs1456068153 267 dbSNP
rs1387752176 268 dbSNP
rs990580130 271 dbSNP
rs1453849451 274 dbSNP
rs1168272517 277 dbSNP
rs959065288 279 dbSNP
rs1171296479 283 dbSNP
rs1455423298 283 dbSNP
rs1022253741 286 dbSNP
rs376565083 287 dbSNP
rs772731477 291 dbSNP
rs959481023 296 dbSNP
rs758327303 299 dbSNP
rs1252726263 304 dbSNP
rs551682542 308 dbSNP
rs1254491798 309 dbSNP
rs1236726541 311 dbSNP
rs981703047 312 dbSNP
rs1004142234 314 dbSNP
rs576409559 316 dbSNP
rs897338425 331 dbSNP
rs1319540752 332 dbSNP
rs1015148724 333 dbSNP
rs1005492095 341 dbSNP
rs879724520 344 dbSNP
rs952227884 345 dbSNP
rs1436140488 346 dbSNP
rs1028193525 349 dbSNP
rs556234029 357 dbSNP
rs888698859 362 dbSNP
rs556147811 372 dbSNP
rs1272027799 374 dbSNP
rs1374741982 375 dbSNP
rs539438747 379 dbSNP
rs1049457465 382 dbSNP
rs1254116484 385 dbSNP
rs1437143383 387 dbSNP
rs900556649 388 dbSNP
rs1040404231 391 dbSNP
rs1040819635 393 dbSNP
rs1226723481 394 dbSNP
rs537987684 395 dbSNP
rs1244646649 396 dbSNP
rs978965333 397 dbSNP
rs1441449177 401 dbSNP
rs1416053454 404 dbSNP
rs1351405536 406 dbSNP
rs1306966120 409 dbSNP
rs947342702 414 dbSNP
rs750230479 427 dbSNP
rs772890163 436 dbSNP
rs1419555762 437 dbSNP
rs1042286655 440 dbSNP
rs1415544659 442 dbSNP
rs946579502 442 dbSNP
rs1169978393 447 dbSNP
rs893631456 449 dbSNP
rs4075974 450 dbSNP
rs1162093302 451 dbSNP
rs937765334 451 dbSNP
rs1202614349 455 dbSNP
rs1194650565 456 dbSNP
rs1274092603 459 dbSNP
rs190482919 463 dbSNP
rs1209590237 467 dbSNP
rs1354908690 469 dbSNP
rs1489632864 476 dbSNP
rs1231545987 481 dbSNP
rs1295644418 482 dbSNP
rs1355471072 483 dbSNP
rs199744637 483 dbSNP
rs1287364486 484 dbSNP
rs1438643469 484 dbSNP
rs534221559 484 dbSNP
rs371897610 489 dbSNP
rs981755664 490 dbSNP
rs1329343057 491 dbSNP
rs187163120 493 dbSNP
rs908144960 494 dbSNP
rs983719784 507 dbSNP
rs952348748 514 dbSNP
rs1034960537 519 dbSNP
rs1027831898 527 dbSNP
rs533680232 528 dbSNP
rs1233634640 529 dbSNP
rs182473988 532 dbSNP
rs1467402969 537 dbSNP
rs1275608115 538 dbSNP
rs1369402973 539 dbSNP
rs548376680 540 dbSNP
rs567020921 542 dbSNP
rs1008923661 543 dbSNP
rs1221544430 547 dbSNP
rs1129064 557 dbSNP
rs151126664 561 dbSNP
rs1432401745 564 dbSNP
rs1028562016 565 dbSNP
rs1021322568 566 dbSNP
rs1327880962 567 dbSNP
rs763550699 570 dbSNP
rs997079696 574 dbSNP
rs1157058203 575 dbSNP
rs569226170 576 dbSNP
rs1409057807 578 dbSNP
rs1174751940 583 dbSNP
rs368251055 585 dbSNP
rs1406193764 590 dbSNP
rs1172149444 596 dbSNP
rs893673667 596 dbSNP
rs1054901985 603 dbSNP
rs1255236658 610 dbSNP
rs1194634563 617 dbSNP
rs1177032859 627 dbSNP
rs1240862857 639 dbSNP
rs900854332 640 dbSNP
rs143985752 653 dbSNP
rs7544747 656 dbSNP
rs1345495974 659 dbSNP
rs79190261 667 dbSNP
rs546965216 671 dbSNP
rs1234710148 676 dbSNP
rs1364451225 679 dbSNP
rs1432991848 681 dbSNP
rs1345825300 684 dbSNP
rs1333786960 694 dbSNP
rs1433150854 694 dbSNP
rs1397088675 700 dbSNP
rs1281152964 705 dbSNP
rs1449230383 712 dbSNP
rs1042927757 741 dbSNP
rs947206974 746 dbSNP
rs1486579104 757 dbSNP
rs915850592 759 dbSNP
rs530266189 762 dbSNP
rs984161039 773 dbSNP
rs1313918929 775 dbSNP
rs930914974 794 dbSNP
rs938571578 795 dbSNP
rs1234821319 796 dbSNP
rs1306644259 808 dbSNP
rs1223062370 822 dbSNP
rs1216211167 823 dbSNP
rs1373603751 824 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048188. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_ptb_knockdown ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uacaggguggggguGAGGACa 5'
                        |||||| 
Target 5' ------------acCUCCUGg 3'
1 - 9
2
miRNA  3' uacaggguggggguGAGGACA-- 5'
                        ||||||   
Target 5' ggguucaagugauuCUCCUGCCU 3'
8 - 30
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048188
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_ptb_knockdown
Location of target site ENST00000361605.3 | 3UTR | ACCUCCUGGGUUCAAGUGAUUCUCCUGCCUCAGCCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
256 hsa-miR-4433a-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT088097 SEPT2 septin 2 2 2
MIRT143134 MGRN1 mahogunin ring finger 1 2 2
MIRT153912 NCOA3 nuclear receptor coactivator 3 2 2
MIRT154894 GNAS GNAS complex locus 2 4
MIRT200996 ZNF805 zinc finger protein 805 2 2
MIRT215729 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT235593 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT263250 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT317951 CDC5L cell division cycle 5 like 2 4
MIRT325572 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT354739 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 2 2
MIRT444552 UBE2D3 ubiquitin conjugating enzyme E2 D3 2 4
MIRT446978 SUSD5 sushi domain containing 5 2 2
MIRT451036 ZNF610 zinc finger protein 610 2 2
MIRT451596 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT452025 NLRP6 NLR family pyrin domain containing 6 2 2
MIRT452594 CA6 carbonic anhydrase 6 2 2
MIRT452768 TCEA3 transcription elongation factor A3 2 4
MIRT452959 ZNF844 zinc finger protein 844 2 2
MIRT453191 ACSF2 acyl-CoA synthetase family member 2 2 2
MIRT453382 RHD Rh blood group D antigen 2 2
MIRT453685 CEBPD CCAAT/enhancer binding protein delta 2 2
MIRT455272 DDX39B DExD-box helicase 39B 2 8
MIRT455346 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT456494 SERAC1 serine active site containing 1 2 2
MIRT456585 NID1 nidogen 1 2 2
MIRT456888 DDA1 DET1 and DDB1 associated 1 2 2
MIRT457123 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT457852 ZNF324B zinc finger protein 324B 2 2
MIRT457987 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT459278 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 2
MIRT459625 SLC25A33 solute carrier family 25 member 33 2 2
MIRT459715 SGK494 uncharacterized serine/threonine-protein kinase SgK494 2 2
MIRT460057 RPL22L1 ribosomal protein L22 like 1 2 2
MIRT460182 UNK unkempt family zinc finger 2 6
MIRT460288 PDE11A phosphodiesterase 11A 2 2
MIRT460841 EGF epidermal growth factor 2 4
MIRT460860 TBC1D19 TBC1 domain family member 19 2 2
MIRT461519 EMC7 ER membrane protein complex subunit 7 2 2
MIRT461729 SLC27A1 solute carrier family 27 member 1 2 4
MIRT461821 SNAP23 synaptosome associated protein 23 2 2
MIRT462066 CCDC77 coiled-coil domain containing 77 2 4
MIRT462084 MSANTD2 Myb/SANT DNA binding domain containing 2 2 2
MIRT462508 MTFMT mitochondrial methionyl-tRNA formyltransferase 2 10
MIRT464239 VCP valosin containing protein 2 2
MIRT465316 TRAF5 TNF receptor associated factor 5 2 2
MIRT466549 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467128 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 8
MIRT468091 SHCBP1 SHC binding and spindle associated 1 2 2
MIRT469630 RAD21 RAD21 cohesin complex component 2 6
MIRT471097 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472704 MYBL1 MYB proto-oncogene like 1 2 2
MIRT472830 MTMR10 myotubularin related protein 10 2 2
MIRT472872 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT472895 MTDH metadherin 2 2
MIRT473728 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT473859 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT474047 LONRF1 LON peptidase N-terminal domain and ring finger 1 2 2
MIRT474297 LAMC1 laminin subunit gamma 1 2 2
MIRT474658 KLF13 Kruppel like factor 13 2 2
MIRT475234 IKZF3 IKAROS family zinc finger 3 2 2
MIRT475500 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT475742 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT475793 HDGF heparin binding growth factor 2 2
MIRT477254 ERGIC2 ERGIC and golgi 2 2 2
MIRT478228 DDX52 DExD-box helicase 52 2 2
MIRT478393 DCTN5 dynactin subunit 5 2 2
MIRT478754 CS citrate synthase 2 2
MIRT478827 CRKL CRK like proto-oncogene, adaptor protein 2 4
MIRT480234 C9orf41 carnosine N-methyltransferase 1 2 2
MIRT480597 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT484121 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT484689 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT486331 C11orf54 chromosome 11 open reading frame 54 2 4
MIRT488599 FAM3C family with sequence similarity 3 member C 2 8
MIRT488833 MRRF mitochondrial ribosome recycling factor 2 2
MIRT492523 RAB15 RAB15, member RAS oncogene family 2 4
MIRT493632 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT500026 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501075 SMAD7 SMAD family member 7 2 8
MIRT503094 BTG2 BTG anti-proliferation factor 2 2 4
MIRT503336 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT505465 STMN1 stathmin 1 2 4
MIRT505726 SERTAD3 SERTA domain containing 3 2 4
MIRT509333 MS4A4A membrane spanning 4-domains A4A 2 2
MIRT509978 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 4
MIRT513068 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT513446 EMP1 epithelial membrane protein 1 2 6
MIRT513736 PSD3 pleckstrin and Sec7 domain containing 3 2 4
MIRT513996 CENPQ centromere protein Q 2 4
MIRT516538 MIXL1 Mix paired-like homeobox 2 2
MIRT517606 SAV1 salvador family WW domain containing protein 1 2 2
MIRT518064 CEP89 centrosomal protein 89 2 2
MIRT518119 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT518325 WDR92 WD repeat domain 92 2 2
MIRT519048 ABCB11 ATP binding cassette subfamily B member 11 2 2
MIRT520972 SPPL2A signal peptide peptidase like 2A 2 4
MIRT521359 RPL35A ribosomal protein L35a 2 2
MIRT523359 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT523801 FAM63A MINDY lysine 48 deubiquitinase 1 2 2
MIRT524622 C7orf73 short transmembrane mitochondrial protein 1 2 2
MIRT525550 PHB2 prohibitin 2 2 4
MIRT529709 ZBTB49 zinc finger and BTB domain containing 49 2 2
MIRT531605 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT532387 UMPS uridine monophosphate synthetase 2 2
MIRT534468 SCD stearoyl-CoA desaturase 2 4
MIRT537546 ETNK1 ethanolamine kinase 1 2 2
MIRT541619 C11orf31 selenoprotein H 2 2
MIRT548380 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT549523 HDDC2 HD domain containing 2 2 2
MIRT549774 SOD2 superoxide dismutase 2 2 2
MIRT550578 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551498 CENPN centromere protein N 2 4
MIRT552301 ITGA3 integrin subunit alpha 3 2 2
MIRT555400 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT556399 LUC7L LUC7 like 2 2
MIRT557047 HOXB3 homeobox B3 2 2
MIRT558072 ERO1L endoplasmic reticulum oxidoreductase 1 alpha 1 2
MIRT559659 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT561239 ZNF354B zinc finger protein 354B 2 2
MIRT566899 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT568786 FAM120B family with sequence similarity 120B 2 2
MIRT574014 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT574885 Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 2 2
MIRT575243 Serping1 serine (or cysteine) peptidase inhibitor, clade G, member 1 2 2
MIRT576194 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576309 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576484 Lhx4 LIM homeobox protein 4 2 3
MIRT576646 Mill2 MHC I like leukocyte 2 1 1
MIRT576708 Kras Kirsten rat sarcoma viral oncogene homolog 2 2
MIRT576855 Socs6 suppressor of cytokine signaling 6 2 2
MIRT576950 Aldoa aldolase A, fructose-bisphosphate 2 2
MIRT617133 ZNF556 zinc finger protein 556 2 4
MIRT617928 ZNF783 zinc finger family member 783 2 2
MIRT618981 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT621100 SIX3 SIX homeobox 3 2 2
MIRT624537 BROX BRO1 domain and CAAX motif containing 2 2
MIRT625663 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT627059 DCTN6 dynactin subunit 6 2 2
MIRT628319 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT630859 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT632295 TMEM65 transmembrane protein 65 2 2
MIRT634115 ZNF207 zinc finger protein 207 2 2
MIRT634736 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT635655 NDST3 N-deacetylase and N-sulfotransferase 3 2 2
MIRT635772 PDCL3 phosducin like 3 2 2
MIRT635911 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT636365 OGFRL1 opioid growth factor receptor like 1 2 4
MIRT637251 GLRX2 glutaredoxin 2 2 2
MIRT638705 FZD4 frizzled class receptor 4 2 2
MIRT639640 PREX2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 2 2
MIRT639676 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT642267 SMIM17 small integral membrane protein 17 2 2
MIRT642372 ZNF581 zinc finger protein 581 2 2
MIRT643545 SLC25A17 solute carrier family 25 member 17 2 2
MIRT647994 PDE12 phosphodiesterase 12 2 2
MIRT649094 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT650993 ZNF770 zinc finger protein 770 2 2
MIRT651956 UBE2N ubiquitin conjugating enzyme E2 N 2 2
MIRT652977 SUN2 Sad1 and UNC84 domain containing 2 2 2
MIRT654389 RBM12B RNA binding motif protein 12B 2 2
MIRT655637 OLFML2A olfactomedin like 2A 2 2
MIRT655729 NRXN3 neurexin 3 2 2
MIRT658171 FCHSD1 FCH and double SH3 domains 1 2 2
MIRT660937 ACOX1 acyl-CoA oxidase 1 2 2
MIRT662112 CERKL ceramide kinase like 2 2
MIRT662302 MPV17L MPV17 mitochondrial inner membrane protein like 2 2
MIRT662993 TMEM59 transmembrane protein 59 2 2
MIRT663071 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT663704 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663864 MUC20 mucin 20, cell surface associated 2 2
MIRT665185 HAUS5 HAUS augmin like complex subunit 5 2 4
MIRT665402 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT665688 TNPO3 transportin 3 2 2
MIRT665795 TMEM170A transmembrane protein 170A 2 2
MIRT665847 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT666999 PDPN podoplanin 2 2
MIRT667598 LIPC lipase C, hepatic type 2 2
MIRT668576 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT670960 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT671187 ZNF891 zinc finger protein 891 2 2
MIRT671739 ZNF451 zinc finger protein 451 2 2
MIRT672745 ZNF585B zinc finger protein 585B 2 4
MIRT673446 ZNF583 zinc finger protein 583 2 2
MIRT679843 GPR75 G protein-coupled receptor 75 2 2
MIRT680556 ZNF584 zinc finger protein 584 2 2
MIRT680661 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT681285 RFC2 replication factor C subunit 2 2 2
MIRT683264 ZNF329 zinc finger protein 329 2 2
MIRT684519 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT685065 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685157 DTWD2 DTW domain containing 2 2 2
MIRT685168 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT685470 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT686001 NEK4 NIMA related kinase 4 2 2
MIRT687027 RNF24 ring finger protein 24 2 2
MIRT687543 MOB1B MOB kinase activator 1B 2 2
MIRT687592 MANEAL mannosidase endo-alpha like 2 2
MIRT687753 KIAA1328 KIAA1328 2 2
MIRT688050 GLUL glutamate-ammonia ligase 2 2
MIRT688374 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 2 2
MIRT688802 CBFA2T3 CBFA2/RUNX1 translocation partner 3 2 2
MIRT688957 ATXN3 ataxin 3 2 2
MIRT689281 C5AR2 complement component 5a receptor 2 2 2
MIRT689988 NNMT nicotinamide N-methyltransferase 2 2
MIRT689997 MMP17 matrix metallopeptidase 17 2 2
MIRT690014 LUZP2 leucine zipper protein 2 2 2
MIRT690161 ELP3 elongator acetyltransferase complex subunit 3 2 2
MIRT690379 ZSWIM7 zinc finger SWIM-type containing 7 2 2
MIRT690563 MICA MHC class I polypeptide-related sequence A 2 2
MIRT691891 EVC EvC ciliary complex subunit 1 2 2
MIRT693107 SCNM1 sodium channel modifier 1 2 2
MIRT693832 ZFP64 ZFP64 zinc finger protein 2 2
MIRT694105 ZNF446 zinc finger protein 446 2 2
MIRT694179 ZNF486 zinc finger protein 486 2 2
MIRT694475 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT694998 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 2 2
MIRT695031 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT695163 TCTN2 tectonic family member 2 2 2
MIRT695525 SLC25A34 solute carrier family 25 member 34 2 2
MIRT696067 ZNF264 zinc finger protein 264 2 2
MIRT696616 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT696661 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696705 PNPO pyridoxamine 5'-phosphate oxidase 2 2
MIRT697173 INMT indolethylamine N-methyltransferase 2 2
MIRT697303 ZNF652 zinc finger protein 652 2 2
MIRT697491 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT698657 TERF2 telomeric repeat binding factor 2 2 2
MIRT699042 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699185 SLX4IP SLX4 interacting protein 2 2
MIRT699598 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT700150 RNF115 ring finger protein 115 2 2
MIRT700720 PNO1 partner of NOB1 homolog 2 2
MIRT700870 PER2 period circadian clock 2 2 2
MIRT700912 PDXK pyridoxal kinase 2 2
MIRT701095 PAPOLG poly(A) polymerase gamma 2 2
MIRT701194 OTUD3 OTU deubiquitinase 3 2 2
MIRT702203 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT702272 LHX4 LIM homeobox 4 2 3
MIRT703125 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT703252 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT703262 GNL3L G protein nucleolar 3 like 2 2
MIRT703440 FYTTD1 forty-two-three domain containing 1 2 2
MIRT704321 DCUN1D5 defective in cullin neddylation 1 domain containing 5 2 2
MIRT704393 CTSS cathepsin S 2 2
MIRT704483 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT704880 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT704926 CCDC36 coiled-coil domain containing 36 2 2
MIRT705175 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT706561 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT707048 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT711497 PGD phosphogluconate dehydrogenase 2 2
MIRT716644 EPGN epithelial mitogen 2 2
MIRT720083 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT722288 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT725468 GRAP2 GRB2-related adaptor protein 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4433a Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-4433a Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-mir-4433a Vincristine 5978 approved resistant cell line (W1)
hsa-mir-4433a Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4433a-3p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Pancreatic Cancer cell line (BxPC-3)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (mitochondrial RNA)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-4433a-3p Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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