pre-miRNA Information
pre-miRNA hsa-mir-4419b   
Genomic Coordinates chr12: 128244506 - 128244573
Description Homo sapiens miR-4419b stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4419b
Sequence 42| GAGGCUGAAGGAAGAUGG |59
Evidence Experimental
Experiments Illumina
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SLC27A1   
Synonyms ACSVL5, FATP, FATP-1, FATP1
Description solute carrier family 27 member 1
Transcript NM_198580   
Expression
Putative miRNA Targets on SLC27A1
3'UTR of SLC27A1
(miRNA target sites are highlighted)
>SLC27A1|NM_198580|3'UTR
   1 AGCTGTTCCTCTACTGGCCACAAACTCTGGGCCTGGTGGGAGAGGCCAGCTTGAGCCAGACAGCGCTGCCCAGGGGTGGC
  81 CGCCTAGTACACACCCACCTGGCCGAGCTGTACCTGGCACGGCCCATCCTGGACTGAGAAACTGGAACCTCAGAGGAACC
 161 CGTGCCTCTCTGCTGCCTTGGTGCCCCTGTGTCTGCCTCCTCTCCCTGCTTTTCAGCCTCTGTCTCCTTCCATCCCTGTC
 241 CCTGTCTGGCCTTAACTCTTCCCTCTTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTAAGATAGAGTCTCACTCTGCTG
 321 CCCGGGCTAGAGTGCAGTGGTGGGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGGTTCAAGTGATCCTCCCACCTCAG
 401 CCTCCTGAGTAGCTGGGATTACAGGCACCCGCCACCACGTCCAGCTAATTTTTATATTTTTAGTAGAGACGGGGTTTCAC
 481 CATGTTGGTCAGGTTGGTCTTGAACTCCTGACCTCAGGTGATCCGCTGGCCTCGGCCTCCCAGAGTGCTGGGATTATAGG
 561 CGTGAGCCTCTGGCCCGGCCTTTCCTTTTTCCTCTCCTCTCCTGCCGAGAGTGGAACACGCGTGTCCTGGGAGCTGCATC
 641 TTGTGTAGGGTCCAGCTGCTTTTGGGGACTGCAGGAATCATCTCCCCTGGGCCCTGGACTCGGACTGGGGCCTCCCCACC
 721 TCCCTCTCGGCTGTGCCTTACGGAGCCCCGATCCAGGCCTCCTGTGGCTGTTGGGTTCCAGATGCTGCAGCTCCATGTGA
 801 CTTCCAAGCAGGCCCTCCGCCCTCCCTGCTGAATGGAGGAGCCGGGGGTCCCCCAGGCCAACTGGAAAATCTCCCAGGCT
 881 AGGCCAATTGCCTTTTGCACTTCCCCGTTCCTGTCACATTTCCCCAGCCCCACCTTCCCCTCCTGATGCCCTGAAAGCTT
 961 CCGGAATTGACTGTGACCACTTGGATGTCACCACTGTCAGCCCCTGCCTTGATGTCCCCATTTAGCCATCTCCATGGAGC
1041 TCCTGCTGGAGGGCCCTGAACCCTGCACTGCGTGGCTGCCCAGCCAGCTGCCTCCTGTCCTGGGAGGAGGCCTCCTGGGT
1121 GTCCTCATCTGGTGTGTCTACTGGAGGGTCCCACAGGAGAGGCAGCAGAGGGGTCAGGGGAGGTCTCCTGCCGGGGGTTG
1201 GCCTCTCAAGCCTCAGGGGTTCTAGCCTGTTGAATATACCCCACCTGGTGGTGGCCCCTCCGATGTCCCCACTGATGGCT
1281 CTGACACCGTGTTGGTGGCGATGTCCCAGACAATCCCACCAGGACGGCCCAGACATCCCTACTGGCTTCGCTGGTGGCTC
1361 ATCTCGAACATCCACGCCAGCCTTTCTGGGGCCGGCCACCCAGGCCGCCTGTCCGTCTGTCCTCCCTCCAGCAGCACCCC
1441 CTGGCCCCTGGAGTGGTGGGGCCATGGCAAGAGACACCGTGGCGTCTCATGTGAACTTTCCTGGGCACTGTGGTTTTATT
1521 TCCTAATTGATTTAAGAAATAAACCTGAAGACCGTCAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ggUAGAAG---GAAGUCGGAg 5'
            ||| ||   | ||||||| 
Target 5' tgATCCTCCCACCTCAGCCTc 3'
384 - 404 152.00 -17.90
2
miRNA  3' gguAGAAGG-----AAGUCGGAg 5'
             ||| ||     |||||||| 
Target 5' tccTCTCCCTGCTTTTCAGCCTc 3'
198 - 220 151.00 -19.60
3
miRNA  3' gguaGAAGGAAGUCGGAg 5'
              ||  | ||:|||| 
Target 5' tccgCTGGCCTCGGCCTc 3'
522 - 539 130.00 -19.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31610321 14 COSMIC
COSN30165965 21 COSMIC
COSN13787666 66 COSMIC
COSN30132746 69 COSMIC
COSN30718935 83 COSMIC
COSN31957575 110 COSMIC
COSN1211921 126 COSMIC
COSN17993869 189 COSMIC
COSN28836261 299 COSMIC
COSN28792456 495 COSMIC
COSN31490506 532 COSMIC
COSN28659182 621 COSMIC
COSN28728309 751 COSMIC
COSN2488015 888 COSMIC
COSN31579011 898 COSMIC
COSN23337082 963 COSMIC
COSN17078182 1406 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1426949392 2 dbSNP
rs373412967 3 dbSNP
rs1473348005 6 dbSNP
rs779233180 8 dbSNP
rs377300425 9 dbSNP
rs1416757571 12 dbSNP
rs1160001094 14 dbSNP
rs1175605127 15 dbSNP
rs369947741 16 dbSNP
rs770073559 19 dbSNP
rs781162579 23 dbSNP
rs745733812 36 dbSNP
rs769866361 38 dbSNP
rs1448550691 39 dbSNP
rs1279159141 41 dbSNP
rs199771137 43 dbSNP
rs1242392005 46 dbSNP
rs1224466127 49 dbSNP
rs748895677 50 dbSNP
rs1347250777 51 dbSNP
rs928898475 53 dbSNP
rs898445955 56 dbSNP
rs1221634781 57 dbSNP
rs532377783 64 dbSNP
rs995418043 64 dbSNP
rs886781076 65 dbSNP
rs568106694 66 dbSNP
rs774103233 69 dbSNP
rs1204314221 77 dbSNP
rs1231947302 79 dbSNP
rs1456212292 80 dbSNP
rs761396878 81 dbSNP
rs142694378 82 dbSNP
rs773575275 83 dbSNP
rs1317090789 87 dbSNP
rs914757144 93 dbSNP
rs1171662077 95 dbSNP
rs761115813 96 dbSNP
rs1414825354 97 dbSNP
rs1328002310 100 dbSNP
rs766934450 101 dbSNP
rs1408820855 104 dbSNP
rs557064087 105 dbSNP
rs755131411 106 dbSNP
rs899577510 109 dbSNP
rs183724830 111 dbSNP
rs1204770806 112 dbSNP
rs1438863073 117 dbSNP
rs1277087437 119 dbSNP
rs752923071 121 dbSNP
rs758552719 122 dbSNP
rs781076125 123 dbSNP
rs745715850 124 dbSNP
rs756117368 125 dbSNP
rs780183043 126 dbSNP
rs748726991 127 dbSNP
rs1196219802 139 dbSNP
rs1248374584 142 dbSNP
rs964109665 149 dbSNP
rs1167267050 152 dbSNP
rs1421158053 154 dbSNP
rs1467011384 155 dbSNP
rs1171620910 156 dbSNP
rs768166497 157 dbSNP
rs778320132 162 dbSNP
rs747774770 163 dbSNP
rs1331764937 165 dbSNP
rs1309383517 173 dbSNP
rs1407555048 175 dbSNP
rs1430558238 176 dbSNP
rs1268963318 178 dbSNP
rs747000106 184 dbSNP
rs771729270 186 dbSNP
rs199668849 187 dbSNP
rs773558885 188 dbSNP
rs10417922 189 dbSNP
rs1207716073 197 dbSNP
rs541384109 201 dbSNP
rs1451709607 205 dbSNP
rs1455557295 206 dbSNP
rs553223596 207 dbSNP
rs1163054422 209 dbSNP
rs1442837671 210 dbSNP
rs1021735226 214 dbSNP
rs1260999787 216 dbSNP
rs1478661445 220 dbSNP
rs1408158542 221 dbSNP
rs968976269 221 dbSNP
rs1194203276 227 dbSNP
rs545228977 228 dbSNP
rs771403950 229 dbSNP
rs1165222802 230 dbSNP
rs777143344 232 dbSNP
rs573204490 233 dbSNP
rs765292093 234 dbSNP
rs1486664892 240 dbSNP
rs1363083637 242 dbSNP
rs977638740 243 dbSNP
rs1293006614 245 dbSNP
rs924816455 246 dbSNP
rs898332246 247 dbSNP
rs960073734 248 dbSNP
rs1242112716 249 dbSNP
rs752732712 250 dbSNP
rs1023082082 253 dbSNP
rs1293211290 263 dbSNP
rs376449154 266 dbSNP
rs780888887 266 dbSNP
rs1283792148 267 dbSNP
rs1489263444 268 dbSNP
rs1341417818 273 dbSNP
rs552185453 273 dbSNP
rs1422898870 275 dbSNP
rs749783933 280 dbSNP
rs763253760 284 dbSNP
rs542371771 285 dbSNP
rs769923501 285 dbSNP
rs777735665 288 dbSNP
rs1478344298 289 dbSNP
rs371367749 289 dbSNP
rs763018538 289 dbSNP
rs774821039 289 dbSNP
rs775481914 289 dbSNP
rs943737714 291 dbSNP
rs1369314838 292 dbSNP
rs1469690160 294 dbSNP
rs1035709787 299 dbSNP
rs1156996135 300 dbSNP
rs10418172 304 dbSNP
rs1209869486 304 dbSNP
rs1338715750 306 dbSNP
rs899620505 308 dbSNP
rs996544413 324 dbSNP
rs575843461 325 dbSNP
rs1386410383 330 dbSNP
rs779427429 333 dbSNP
rs1324320652 335 dbSNP
rs947619314 350 dbSNP
rs975304254 351 dbSNP
rs1341145442 353 dbSNP
rs1170143423 361 dbSNP
rs1466539337 362 dbSNP
rs1429038504 368 dbSNP
rs904700200 375 dbSNP
rs1479268314 376 dbSNP
rs921047333 378 dbSNP
rs186622801 379 dbSNP
rs1436712686 386 dbSNP
rs540268104 392 dbSNP
rs1031934814 407 dbSNP
rs916713348 428 dbSNP
rs1458113927 429 dbSNP
rs932411634 431 dbSNP
rs1325976300 432 dbSNP
rs533328309 432 dbSNP
rs890802306 436 dbSNP
rs1229436678 439 dbSNP
rs540651052 444 dbSNP
rs1036949777 450 dbSNP
rs898400497 455 dbSNP
rs1448191604 456 dbSNP
rs1405938558 457 dbSNP
rs1335188118 460 dbSNP
rs774267300 462 dbSNP
rs559637741 463 dbSNP
rs528405411 465 dbSNP
rs548505089 466 dbSNP
rs1279877853 471 dbSNP
rs762148001 472 dbSNP
rs1207400990 476 dbSNP
rs1002969133 484 dbSNP
rs10418594 495 dbSNP
rs973488165 499 dbSNP
rs956027041 502 dbSNP
rs1010238037 508 dbSNP
rs1021911147 514 dbSNP
rs1278986001 521 dbSNP
rs1472697280 525 dbSNP
rs137968411 526 dbSNP
rs1281376540 527 dbSNP
rs550371403 530 dbSNP
rs982999586 539 dbSNP
rs1313543754 544 dbSNP
rs1454981669 546 dbSNP
rs1360117687 547 dbSNP
rs1318008846 551 dbSNP
rs1399776387 557 dbSNP
rs975000111 558 dbSNP
rs546108338 560 dbSNP
rs922107012 563 dbSNP
rs1272009353 565 dbSNP
rs1181680288 566 dbSNP
rs1414024606 567 dbSNP
rs1473703557 570 dbSNP
rs954867057 571 dbSNP
rs1332235730 575 dbSNP
rs986518360 576 dbSNP
rs1192148031 577 dbSNP
rs1356310316 578 dbSNP
rs912310934 580 dbSNP
rs1288396440 590 dbSNP
rs1217515947 591 dbSNP
rs1410697144 595 dbSNP
rs1230545997 596 dbSNP
rs1270012731 597 dbSNP
rs1354795229 598 dbSNP
rs943938640 606 dbSNP
rs1349026120 607 dbSNP
rs939725724 608 dbSNP
rs1276023875 610 dbSNP
rs1400157771 611 dbSNP
rs1364421829 614 dbSNP
rs780108139 620 dbSNP
rs4808657 621 dbSNP
rs932278261 622 dbSNP
rs539000978 623 dbSNP
rs1483063665 626 dbSNP
rs1265703892 627 dbSNP
rs1204004829 649 dbSNP
rs1490232290 651 dbSNP
rs1266897626 666 dbSNP
rs919875518 682 dbSNP
rs931239387 683 dbSNP
rs1272897489 690 dbSNP
rs904250117 691 dbSNP
rs1320449150 694 dbSNP
rs141946014 698 dbSNP
rs1490795560 700 dbSNP
rs905699158 702 dbSNP
rs566173661 703 dbSNP
rs1199273838 713 dbSNP
rs1300784818 714 dbSNP
rs1437956013 716 dbSNP
rs1057275499 717 dbSNP
rs891877630 718 dbSNP
rs1010266074 728 dbSNP
rs1477015905 729 dbSNP
rs1022064738 730 dbSNP
rs968720482 742 dbSNP
rs996840855 743 dbSNP
rs970054116 746 dbSNP
rs1427427480 749 dbSNP
rs193262179 750 dbSNP
rs2278280 751 dbSNP
rs987592842 757 dbSNP
rs1324585183 758 dbSNP
rs1459440708 758 dbSNP
rs371890022 770 dbSNP
rs73922216 771 dbSNP
rs1434976701 774 dbSNP
rs1272364323 775 dbSNP
rs1322455172 776 dbSNP
rs74417244 779 dbSNP
rs558252316 782 dbSNP
rs1272097205 784 dbSNP
rs919596535 797 dbSNP
rs1278386761 805 dbSNP
rs1444503510 813 dbSNP
rs759513728 819 dbSNP
rs764850185 820 dbSNP
rs977076702 822 dbSNP
rs752170621 823 dbSNP
rs921144056 829 dbSNP
rs927230047 832 dbSNP
rs938528948 836 dbSNP
rs1056972617 844 dbSNP
rs891611916 845 dbSNP
rs1175512041 848 dbSNP
rs1195249941 849 dbSNP
rs932330629 853 dbSNP
rs1203495143 857 dbSNP
rs748514188 860 dbSNP
rs1211817069 866 dbSNP
rs1312362222 872 dbSNP
rs1305711167 878 dbSNP
rs1248566901 885 dbSNP
rs1450236240 894 dbSNP
rs1043112435 898 dbSNP
rs10418275 905 dbSNP
rs529689435 907 dbSNP
rs777291449 908 dbSNP
rs1344794300 913 dbSNP
rs890697149 914 dbSNP
rs1014392927 919 dbSNP
rs559368756 921 dbSNP
rs1214932121 923 dbSNP
rs1015063232 924 dbSNP
rs962153766 925 dbSNP
rs529335410 928 dbSNP
rs1259764198 929 dbSNP
rs1027642093 931 dbSNP
rs541735897 935 dbSNP
rs1355226267 941 dbSNP
rs751150875 943 dbSNP
rs562032231 945 dbSNP
rs867477021 950 dbSNP
rs549713957 951 dbSNP
rs1026695558 962 dbSNP
rs185374716 963 dbSNP
rs77674303 964 dbSNP
rs1361260603 978 dbSNP
rs976524938 988 dbSNP
rs1264432284 992 dbSNP
rs1354081506 993 dbSNP
rs1165996519 999 dbSNP
rs1428281749 1004 dbSNP
rs1260690769 1009 dbSNP
rs927222413 1012 dbSNP
rs1489037095 1015 dbSNP
rs1263308875 1020 dbSNP
rs921198080 1028 dbSNP
rs756525992 1034 dbSNP
rs978433117 1036 dbSNP
rs1306709008 1040 dbSNP
rs925619130 1040 dbSNP
rs34915798 1042 dbSNP
rs938599760 1043 dbSNP
rs1268751121 1048 dbSNP
rs992715999 1062 dbSNP
rs1341319512 1064 dbSNP
rs780395211 1070 dbSNP
rs570171868 1072 dbSNP
rs913078511 1073 dbSNP
rs916979689 1080 dbSNP
rs967709703 1090 dbSNP
rs1421954175 1093 dbSNP
rs1173221959 1098 dbSNP
rs1478619849 1103 dbSNP
rs1044566848 1109 dbSNP
rs1197611923 1119 dbSNP
rs1449373918 1122 dbSNP
rs1268754798 1127 dbSNP
rs945823690 1133 dbSNP
rs1043575532 1138 dbSNP
rs1188589077 1143 dbSNP
rs1368102132 1149 dbSNP
rs1480239807 1154 dbSNP
rs1255955056 1156 dbSNP
rs1200271157 1162 dbSNP
rs1318933807 1165 dbSNP
rs1282873009 1171 dbSNP
rs1231248377 1175 dbSNP
rs1302003552 1176 dbSNP
rs995078859 1176 dbSNP
rs904600967 1181 dbSNP
rs1391352384 1191 dbSNP
rs1049128782 1192 dbSNP
rs886439944 1193 dbSNP
rs932006244 1193 dbSNP
rs532619916 1194 dbSNP
rs1457195029 1197 dbSNP
rs1476803302 1202 dbSNP
rs749837844 1204 dbSNP
rs532857080 1207 dbSNP
rs1019460182 1212 dbSNP
rs966130766 1213 dbSNP
rs1439054558 1216 dbSNP
rs546339062 1217 dbSNP
rs1200368219 1219 dbSNP
rs35811276 1222 dbSNP
rs1458046097 1224 dbSNP
rs1277575284 1238 dbSNP
rs1396106688 1239 dbSNP
rs1347338730 1262 dbSNP
rs58215408 1263 dbSNP
rs1238390642 1264 dbSNP
rs1338317464 1265 dbSNP
rs954002560 1266 dbSNP
rs978652343 1269 dbSNP
rs897998834 1271 dbSNP
rs1032895446 1278 dbSNP
rs1382513973 1286 dbSNP
rs535470066 1289 dbSNP
rs1027184106 1290 dbSNP
rs748207948 1293 dbSNP
rs952481189 1301 dbSNP
rs980198433 1305 dbSNP
rs917011601 1315 dbSNP
rs1172708208 1318 dbSNP
rs1034030840 1323 dbSNP
rs772124619 1324 dbSNP
rs555747862 1326 dbSNP
rs15401 1327 dbSNP
rs1440176635 1330 dbSNP
rs538005540 1331 dbSNP
rs1185099869 1346 dbSNP
rs115113291 1350 dbSNP
rs978607422 1351 dbSNP
rs770888444 1359 dbSNP
rs926055104 1366 dbSNP
rs1351604763 1367 dbSNP
rs1288180732 1372 dbSNP
rs1359296428 1376 dbSNP
rs190319272 1376 dbSNP
rs1050439999 1377 dbSNP
rs940705348 1378 dbSNP
rs1341954558 1383 dbSNP
rs911899133 1387 dbSNP
rs1334398587 1388 dbSNP
rs115831677 1394 dbSNP
rs1358093802 1394 dbSNP
rs181516488 1398 dbSNP
rs1420267720 1399 dbSNP
rs898073946 1402 dbSNP
rs996215318 1405 dbSNP
rs995443680 1407 dbSNP
rs1368755926 1408 dbSNP
rs374342197 1409 dbSNP
rs9137 1413 dbSNP
rs905330954 1415 dbSNP
rs889625000 1416 dbSNP
rs1001299948 1427 dbSNP
rs543030692 1438 dbSNP
rs1033363537 1439 dbSNP
rs1230453371 1440 dbSNP
rs1357506786 1441 dbSNP
rs759356038 1445 dbSNP
rs1308199122 1452 dbSNP
rs1034061814 1456 dbSNP
rs1337911766 1459 dbSNP
rs1226331547 1465 dbSNP
rs765117931 1467 dbSNP
rs1045243 1472 dbSNP
rs1349290580 1476 dbSNP
rs959734796 1477 dbSNP
rs561787408 1478 dbSNP
rs1303382936 1479 dbSNP
rs1312668760 1480 dbSNP
rs1232389722 1482 dbSNP
rs575504964 1484 dbSNP
rs1020242886 1485 dbSNP
rs1194551601 1490 dbSNP
rs1477737305 1490 dbSNP
rs544143864 1491 dbSNP
rs1023967188 1500 dbSNP
rs971173609 1502 dbSNP
rs1452647490 1504 dbSNP
rs372909651 1508 dbSNP
rs866666139 1512 dbSNP
rs752612691 1516 dbSNP
rs979065085 1518 dbSNP
rs925819487 1523 dbSNP
rs184463140 1526 dbSNP
rs763645477 1530 dbSNP
rs1272522702 1532 dbSNP
rs1434285221 1538 dbSNP
rs1350365083 1541 dbSNP
rs911972692 1551 dbSNP
rs150659494 1554 dbSNP
rs770167678 1555 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048188. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_ptb_knockdown ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ggUAGAAG---GAAGUCGGAg 5'
            ||| ||   | ||||||| 
Target 5' ugAUCCUCCCACCUCAGCCUc 3'
3 - 23
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_198580 | 3UTR | CUCCCACCUCAGCCUCCUGAGUAGCUGGGAUUACAGGCAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903836
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_a
Location of target site NM_198580 | 3UTR | UCCUCCCACCUCAGCCUCCUGAGUAGCUGGGAUUACA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM4903837
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_b
Location of target site NM_198580 | 3UTR | GCCUCCUGAGUAGCUGGGAUUACAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM4903838
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / 124_TD_21_c
Location of target site NM_198580 | 3UTR | CCCACCUCAGCCUCCUGAGUAGCUGGGAUUACAGGCAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM1048188
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_ptb_knockdown
Location of target site ENST00000252595.7 | 3UTR | AGUGAUCCUCCCACCUCAGCCUCCUGAGUAGCUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
390 hsa-miR-4419b Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061343 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT072743 GLCE glucuronic acid epimerase 2 2
MIRT180549 TXNIP thioredoxin interacting protein 2 2
MIRT186147 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT271044 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT334761 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 6
MIRT443279 TSPAN15 tetraspanin 15 2 2
MIRT447047 ZNF439 zinc finger protein 439 2 2
MIRT447351 KIF6 kinesin family member 6 2 2
MIRT448925 CKS1B CDC28 protein kinase regulatory subunit 1B 2 2
MIRT452899 PSD4 pleckstrin and Sec7 domain containing 4 2 2
MIRT453087 SUMF2 sulfatase modifying factor 2 2 2
MIRT454071 SLC35E3 solute carrier family 35 member E3 2 2
MIRT456216 LIX1L limb and CNS expressed 1 like 2 6
MIRT456951 LRP10 LDL receptor related protein 10 2 2
MIRT458025 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT459999 RFT1 RFT1 homolog 2 2
MIRT460046 CDCP1 CUB domain containing protein 1 2 2
MIRT460982 STK17B serine/threonine kinase 17b 2 2
MIRT464405 URM1 ubiquitin related modifier 1 2 2
MIRT466256 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT466536 TBXA2R thromboxane A2 receptor 2 2
MIRT470922 PLD5 phospholipase D family member 5 2 8
MIRT472835 MTMR10 myotubularin related protein 10 2 6
MIRT473352 MEMO1 mediator of cell motility 1 2 2
MIRT475504 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT478862 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT480898 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT482686 NXN nucleoredoxin 2 4
MIRT484128 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT486172 TLE3 transducin like enhancer of split 3 2 4
MIRT486539 CLCN7 chloride voltage-gated channel 7 2 2
MIRT486588 ZNF619 zinc finger protein 619 2 2
MIRT495475 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT495536 TXNRD2 thioredoxin reductase 2 2 2
MIRT495566 UNC5C unc-5 netrin receptor C 2 2
MIRT495719 PADI1 peptidyl arginine deiminase 1 2 2
MIRT495890 CLOCK clock circadian regulator 2 2
MIRT495932 SLC7A5P2 solute carrier family 7 member 5 pseudogene 2 2 2
MIRT496026 ZBED3 zinc finger BED-type containing 3 2 2
MIRT496216 PAX6 paired box 6 2 2
MIRT496349 VAMP1 vesicle associated membrane protein 1 2 2
MIRT496354 PPY pancreatic polypeptide 2 2
MIRT496400 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT496416 PARVB parvin beta 2 2
MIRT496458 N6AMT1 N-6 adenine-specific DNA methyltransferase 1 2 2
MIRT496519 GINS2 GINS complex subunit 2 2 2
MIRT496562 SLC39A9 solute carrier family 39 member 9 2 2
MIRT498605 KRT8 keratin 8 2 2
MIRT503434 SLC25A45 solute carrier family 25 member 45 2 6
MIRT503573 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT503847 ATP13A4 ATPase 13A4 2 4
MIRT504247 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 4
MIRT505606 SLC35F1 solute carrier family 35 member F1 2 2
MIRT507749 CERS2 ceramide synthase 2 2 4
MIRT508411 C1orf210 chromosome 1 open reading frame 210 2 6
MIRT508508 RSRC1 arginine and serine rich coiled-coil 1 2 6
MIRT508944 AK4 adenylate kinase 4 2 4
MIRT509460 ZNF587 zinc finger protein 587 2 6
MIRT509862 ZNF641 zinc finger protein 641 2 4
MIRT511397 IKZF3 IKAROS family zinc finger 3 2 6
MIRT512517 BTBD19 BTB domain containing 19 2 2
MIRT513507 NAA50 N(alpha)-acetyltransferase 50, NatE catalytic subunit 2 6
MIRT514155 TMEM145 transmembrane protein 145 2 4
MIRT514486 SLPI secretory leukocyte peptidase inhibitor 2 4
MIRT514521 SHISA9 shisa family member 9 2 2
MIRT514970 KLLN killin, p53-regulated DNA replication inhibitor 2 4
MIRT515030 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT515963 C9orf156 tRNA methyltransferase O 2 2
MIRT516092 ZBTB8OS zinc finger and BTB domain containing 8 opposite strand 2 4
MIRT517223 PRIM1 DNA primase subunit 1 2 4
MIRT517459 PEX26 peroxisomal biogenesis factor 26 2 4
MIRT517790 EFCAB11 EF-hand calcium binding domain 11 2 2
MIRT517979 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT519458 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT519599 ZNF805 zinc finger protein 805 2 2
MIRT520339 UBXN2A UBX domain protein 2A 2 2
MIRT521345 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT521571 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT523382 GSG2 histone H3 associated protein kinase 2 8
MIRT524106 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT524886 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT528772 CD1D CD1d molecule 2 2
MIRT530665 TRIM56 tripartite motif containing 56 2 2
MIRT531107 PEX13 peroxisomal biogenesis factor 13 2 2
MIRT531575 ILDR1 immunoglobulin like domain containing receptor 1 2 2
MIRT535173 PLEKHB2 pleckstrin homology domain containing B2 2 4
MIRT544168 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT550582 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551039 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT551295 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT551339 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT552092 SLFN12L schlafen family member 12 like 2 6
MIRT555403 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557087 HOXB3 homeobox B3 2 2
MIRT559388 ATP11C ATPase phospholipid transporting 11C 2 2
MIRT560305 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT561028 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT562460 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT562982 PARK7 Parkinsonism associated deglycase 2 2
MIRT563548 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT564412 EMILIN2 elastin microfibril interfacer 2 2 4
MIRT569437 PCGF3 polycomb group ring finger 3 2 2
MIRT572097 EXOC8 exocyst complex component 8 2 2
MIRT575571 Cd99 CD99 antigen 2 2
MIRT575789 Tnfrsf10b tumor necrosis factor receptor superfamily, member 10b 2 2
MIRT576975 Lmtk2 lemur tyrosine kinase 2 2 2
MIRT610864 ARSA arylsulfatase A 2 2
MIRT614061 NTPCR nucleoside-triphosphatase, cancer-related 2 2
MIRT614141 THAP1 THAP domain containing 1 2 6
MIRT615235 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617429 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618882 MBL2 mannose binding lectin 2 2 2
MIRT618984 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619196 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620323 AQP6 aquaporin 6 2 2
MIRT621960 STX7 syntaxin 7 2 2
MIRT622057 SSBP2 single stranded DNA binding protein 2 2 2
MIRT624930 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624986 ZNF665 zinc finger protein 665 2 4
MIRT625463 ZNF681 zinc finger protein 681 2 4
MIRT625497 SMAD9 SMAD family member 9 2 2
MIRT625599 KLHL23 kelch like family member 23 2 2
MIRT625668 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625888 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626161 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT626238 ZNF749 zinc finger protein 749 2 2
MIRT626631 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626994 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627898 OLFML2A olfactomedin like 2A 2 2
MIRT627988 NDRG3 NDRG family member 3 2 2
MIRT628324 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628549 ZNF701 zinc finger protein 701 2 2
MIRT629464 WIZ widely interspaced zinc finger motifs 2 2
MIRT630527 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT631487 KLHL21 kelch like family member 21 2 2
MIRT631957 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632178 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632282 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT632321 TMEM185B transmembrane protein 185B 2 2
MIRT632853 IGF1 insulin like growth factor 1 2 2
MIRT632862 HSPA2 heat shock protein family A (Hsp70) member 2 2 2
MIRT633322 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT633398 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633930 DNAH9 dynein axonemal heavy chain 9 2 2
MIRT634785 CBFA2T2 CBFA2/RUNX1 translocation partner 2 2 2
MIRT634851 ABCF1 ATP binding cassette subfamily F member 1 2 2
MIRT636370 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT637219 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT637690 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT639196 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639599 CD3EAP CD3e molecule associated protein 2 2
MIRT639681 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640669 ARSK arylsulfatase family member K 2 2
MIRT642377 ZNF581 zinc finger protein 581 2 2
MIRT642403 ZNF556 zinc finger protein 556 2 2
MIRT645079 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646475 ZNF669 zinc finger protein 669 2 2
MIRT647325 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT647490 ZNF639 zinc finger protein 639 2 2
MIRT647989 PDE12 phosphodiesterase 12 2 2
MIRT648196 CENPN centromere protein N 2 2
MIRT649006 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650457 ZNF141 zinc finger protein 141 2 2
MIRT650533 CCDC77 coiled-coil domain containing 77 2 2
MIRT650999 ZNF770 zinc finger protein 770 2 2
MIRT653832 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 4
MIRT655734 NRXN3 neurexin 3 2 2
MIRT657577 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658610 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT658633 ENAH ENAH, actin regulator 2 2
MIRT659820 CASP16 caspase 16, pseudogene 2 2
MIRT661142 ZNF43 zinc finger protein 43 2 2
MIRT661201 MPPE1 metallophosphoesterase 1 2 2
MIRT661436 MANSC1 MANSC domain containing 1 2 2
MIRT661498 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661682 ZNF623 zinc finger protein 623 2 2
MIRT661796 NLRC3 NLR family CARD domain containing 3 2 2
MIRT661808 NUP85 nucleoporin 85 2 2
MIRT661861 ZNF766 zinc finger protein 766 2 2
MIRT661889 EXOSC6 exosome component 6 2 2
MIRT662291 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662515 ANGPT4 angiopoietin 4 2 2
MIRT662682 LRRC47 leucine rich repeat containing 47 2 2
MIRT662716 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662834 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662890 PCDHA6 protocadherin alpha 6 2 2
MIRT663134 ULBP3 UL16 binding protein 3 2 2
MIRT663710 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663869 MUC20 mucin 20, cell surface associated 2 2
MIRT664267 NMUR1 neuromedin U receptor 1 2 2
MIRT664510 POLR3K RNA polymerase III subunit K 2 2
MIRT664659 TRIM65 tripartite motif containing 65 2 2
MIRT664849 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664944 CARD6 caspase recruitment domain family member 6 2 4
MIRT665348 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT665514 UTP15 UTP15, small subunit processome component 2 2
MIRT665648 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665668 TRAF1 TNF receptor associated factor 1 2 2
MIRT665692 TNPO3 transportin 3 2 2
MIRT665741 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665850 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665940 TBC1D19 TBC1 domain family member 19 2 4
MIRT666005 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666172 SNX27 sorting nexin family member 27 2 4
MIRT666373 SHOX short stature homeobox 2 2
MIRT667004 PDPN podoplanin 2 4
MIRT667185 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667603 LIPC lipase C, hepatic type 2 2
MIRT667828 IRGQ immunity related GTPase Q 2 2
MIRT667862 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668296 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668463 FAM208A family with sequence similarity 208 member A 2 2
MIRT668580 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669012 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669103 CDK19 cyclin dependent kinase 19 2 2
MIRT670073 ZNF783 zinc finger family member 783 2 2
MIRT670326 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT670756 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670964 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT670985 MED17 mediator complex subunit 17 2 2
MIRT671195 ZNF891 zinc finger protein 891 2 2
MIRT672423 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672495 YIPF4 Yip1 domain family member 4 2 2
MIRT672537 MGAM maltase-glucoamylase 2 2
MIRT672749 ZNF585B zinc finger protein 585B 2 4
MIRT673390 ZNF124 zinc finger protein 124 2 2
MIRT673452 ZNF583 zinc finger protein 583 2 2
MIRT673917 DCTN6 dynactin subunit 6 2 2
MIRT673952 ZNF500 zinc finger protein 500 2 2
MIRT674102 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674167 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674206 FUT2 fucosyltransferase 2 2 2
MIRT674452 PURB purine rich element binding protein B 2 4
MIRT674687 PLCE1 phospholipase C epsilon 1 2 2
MIRT674701 TMEM59 transmembrane protein 59 2 2
MIRT674800 NPR1 natriuretic peptide receptor 1 2 4
MIRT675247 MAK male germ cell associated kinase 2 2
MIRT676012 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676374 APTX aprataxin 2 2
MIRT676834 TNFSF15 TNF superfamily member 15 2 2
MIRT678193 CRCP CGRP receptor component 2 2
MIRT678293 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT679532 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679669 RABAC1 Rab acceptor 1 2 2
MIRT679850 GPR75 G protein-coupled receptor 75 2 2
MIRT680533 PRIM2 DNA primase subunit 2 2 2
MIRT680563 ZNF584 zinc finger protein 584 2 2
MIRT680577 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT680849 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680888 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT680940 EVC EvC ciliary complex subunit 1 2 2
MIRT680964 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681017 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681065 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681209 ZNF638 zinc finger protein 638 2 2
MIRT681291 RFC2 replication factor C subunit 2 2 2
MIRT681366 BRI3BP BRI3 binding protein 2 2
MIRT681517 STAT2 signal transducer and activator of transcription 2 2 2
MIRT681549 ZNF738 zinc finger protein 738 2 2
MIRT681574 ABHD15 abhydrolase domain containing 15 2 2
MIRT681597 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681806 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681912 SLC11A2 solute carrier family 11 member 2 2 2
MIRT681953 SLC19A3 solute carrier family 19 member 3 2 2
MIRT682037 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682111 ITGA3 integrin subunit alpha 3 2 4
MIRT682190 SLC38A7 solute carrier family 38 member 7 2 2
MIRT682247 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682394 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682554 EXOSC2 exosome component 2 2 2
MIRT682665 CASP8 caspase 8 2 2
MIRT683283 ZNF99 zinc finger protein 99 2 2
MIRT683359 SCARF1 scavenger receptor class F member 1 2 2
MIRT683453 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683596 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683661 ZNF695 zinc finger protein 695 2 2
MIRT683770 CPE carboxypeptidase E 2 2
MIRT683807 NOTO notochord homeobox 2 2
MIRT684462 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684525 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684985 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685012 CXorf56 chromosome X open reading frame 56 2 2
MIRT685072 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685115 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685477 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685831 SLC27A1 solute carrier family 27 member 1 2 2
MIRT686032 UMPS uridine monophosphate synthetase 2 2
MIRT686559 TPM3 tropomyosin 3 2 2
MIRT687287 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687309 OTUD7B OTU deubiquitinase 7B 2 2
MIRT688085 GLUL glutamate-ammonia ligase 2 2
MIRT688168 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688584 DARS2 aspartyl-tRNA synthetase 2, mitochondrial 2 2
MIRT688601 CYCS cytochrome c, somatic 2 2
MIRT688921 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689285 C5AR2 complement component 5a receptor 2 2 2
MIRT689622 AKAP6 A-kinase anchoring protein 6 2 2
MIRT690051 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690224 C5orf45 MRN complex interacting protein 2 2
MIRT690272 CAMLG calcium modulating ligand 2 2
MIRT690331 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690480 ZNF33A zinc finger protein 33A 2 2
MIRT690526 ZNF566 zinc finger protein 566 2 2
MIRT690581 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690675 RPF2 ribosome production factor 2 homolog 2 2
MIRT690790 ZNF589 zinc finger protein 589 2 2
MIRT690873 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691142 HJURP Holliday junction recognition protein 2 2
MIRT691158 APOL6 apolipoprotein L6 2 2
MIRT691288 CENPM centromere protein M 2 2
MIRT691435 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT691749 IKBKG inhibitor of nuclear factor kappa B kinase subunit gamma 2 2
MIRT691833 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691885 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT691947 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692047 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692668 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692767 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692859 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693122 SCNM1 sodium channel modifier 1 2 2
MIRT693514 MOB3A MOB kinase activator 3A 2 2
MIRT693648 ACBD7 acyl-CoA binding domain containing 7 2 2
MIRT693688 MXRA7 matrix remodeling associated 7 2 2
MIRT694078 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694163 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694262 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694506 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694556 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694639 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT694710 CD300LG CD300 molecule like family member g 2 2
MIRT694753 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694896 ZNF417 zinc finger protein 417 2 2
MIRT695158 BTD biotinidase 2 2
MIRT695275 CD209 CD209 molecule 2 2
MIRT695434 TCF23 transcription factor 23 2 2
MIRT695817 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT696008 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT696345 SLC35D2 solute carrier family 35 member D2 2 2
MIRT696368 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696533 C3 complement C3 2 2
MIRT696779 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697075 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697498 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697630 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697931 TXNDC16 thioredoxin domain containing 16 2 2
MIRT697966 TSPYL1 TSPY like 1 2 2
MIRT698237 TMEM216 transmembrane protein 216 2 2
MIRT698643 TES testin LIM domain protein 2 2
MIRT698661 TERF2 telomeric repeat binding factor 2 2 2
MIRT698974 SPAST spastin 2 2
MIRT699047 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699193 SLX4IP SLX4 interacting protein 2 2
MIRT699586 SIKE1 suppressor of IKBKE 1 2 2
MIRT699759 SEPHS1 selenophosphate synthetase 1 2 2
MIRT700350 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700402 RAB13 RAB13, member RAS oncogene family 2 2
MIRT700418 QDPR quinoid dihydropteridine reductase 2 2
MIRT700546 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700774 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700875 PER2 period circadian clock 2 2 2
MIRT700952 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701077 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT701172 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701479 NEK9 NIMA related kinase 9 2 2
MIRT701661 MYH9 myosin heavy chain 9 2 2
MIRT701779 MSL2 MSL complex subunit 2 2 2
MIRT702137 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT702494 KIAA1328 KIAA1328 2 2
MIRT703058 GTPBP10 GTP binding protein 10 2 2
MIRT703224 GOLGA3 golgin A3 2 2
MIRT703620 FBXO45 F-box protein 45 2 2
MIRT703657 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703765 FAM118A family with sequence similarity 118 member A 2 2
MIRT703832 EVI5 ecotropic viral integration site 5 2 2
MIRT703862 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704664 CLCC1 chloride channel CLIC like 1 2 2
MIRT704812 CDC73 cell division cycle 73 2 2
MIRT705608 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT705625 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705682 ANKRD40 ankyrin repeat domain 40 2 2
MIRT705813 AKNA AT-hook transcription factor 2 2
MIRT706238 SYT15 synaptotagmin 15 2 2
MIRT706567 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT709657 DFFB DNA fragmentation factor subunit beta 2 2
MIRT710609 ZNF555 zinc finger protein 555 2 2
MIRT711717 IREB2 iron responsive element binding protein 2 2 2
MIRT714122 TMED9 transmembrane p24 trafficking protein 9 2 2
MIRT715204 FKTN fukutin 2 2
MIRT718260 ZDHHC8 zinc finger DHHC-type containing 8 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4419b Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-miR-4419b Cisplatin + Decitabine resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-mir-4419b Androstenedione+Anastrozole sensitive cell line (MCF-7)

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