pre-miRNA Information
pre-miRNA hsa-mir-3160-1   
Genomic Coordinates chr11: 46451805 - 46451889
Description Homo sapiens miR-3160-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-3160-2   
Genomic Coordinates chr11: 46451807 - 46451887
Description Homo sapiens miR-3160-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3160-3p
Sequence 54| AGAGCUGAGACUAGAAAGCCCA |75
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30582333 1 COSMIC
COSN1535547 3 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1396368683 1 dbSNP
rs1162409303 2 dbSNP
rs1404378453 12 dbSNP
rs1171960732 14 dbSNP
rs1324633375 16 dbSNP
rs1187765019 16 dbSNP
rs1300058326 19 dbSNP
rs1432898407 21 dbSNP
rs1011279103 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SLC25A32   
Synonyms MFT, MFTC, RREI
Description solute carrier family 25 member 32
Transcript NM_030780   
Expression
Putative miRNA Targets on SLC25A32
3'UTR of SLC25A32
(miRNA target sites are highlighted)
>SLC25A32|NM_030780|3'UTR
   1 GCTCAAAGAGGACAATTCCAGTATATCTGCCCAAGGCAGCAACAAGCTCTTTTGTGTTTAAGGCATAAAAGAAGAATTCT
  81 GCATAGAAACATGGCTCATATTCGAAATTGCTCTATAGTCATTAGAAGCCAGAGAACTGCTAAGTCTCCTGCAATGTTTT
 161 TCTTGCTTTTTGCCTTCCCCATATATATGGAACTTGGCTACCTCTGCCTGAAATGGCTGCCATCAACACAATGTTAAAAC
 241 TGACACGAAGGATAGAGTTTCACAGATTTCTACGTTTTATTGGTGGAAGCTGATTTGCAACATTTGCTAAATGGATTAGA
 321 TGAATGTACTTCTTTTTGTGAGCTTACTTGCCTGGATTGCTTTAAAATTAACCTTTGTGCAATACCAAGAAAATAGCTCT
 401 TTAAAAGAATGTCTTTGTATGTCTCAAGGTAAATTAAGGATTTACTGAATAAGGTGTTGACCAAATCCAGACCATTTTAT
 481 TTTATTTTTTTATTTATTTATTTTTTGAGATGGAGTCTTGCTTTGTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCAGC
 561 TCACTGCAACCTCCACCTCCCGGGTTCACGCCATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACCTGCC
 641 ACCACGCCTGGCTAACTTTTTTTTATATTTTGAGTAGAAATGGGGTTTCACCATGTTAGCCAGGATGGTCTCAATCTCCT
 721 GACCTTGTGATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCTGGCCAGACCATTTT
 801 AGAATTGGGAAATTTTAGTGAGAAAAAATGCACTGTAAATATGCTTTAGTTTTAATTCAGTTGGGATGCACTACCTAGCG
 881 AAAATTGAGAAACTATATACTTCTCAGAGAAATATCTGACATCTATTGTCATTCCATTGCTATTTTTTTTCCCCAGAGAC
 961 TTCCATAATTTAAAATAAAATCCTAGATCCAGTTCTTGTTTTTTGGCATAAATACTTAATCTATTTTAAATTTATAAAAT
1041 CTGAGCTTCTAGGATCCAGCTGTGTCAACCTTTATTTAGCATATATAACTATAAATCACTTATTACAGATGCTAAATAGA
1121 TCACCTTTTACAGATGCTGAAATGTTTGGGATATGTTTGTTGACAAGGTAAATGGAAATGAGAAACTTTATACTTCAGTT
1201 TTCAGATATATGGATCTAGATCCCAAATAAATGATTAATCTTCATTGGTTTCTCAAATTCAGGTTGAAATACAAATTAAT
1281 AGCCTTTATTGATTTTACTTTTATGAGTCATTGTAGACATCTATAAATATAAAAGGGCCTGTACCCAAAGGATGCCAGAA
1361 TACTAGTATTTTTATTTATCGTAAACATCCACGAGTGCTGTTGCACTACCATCTATTTGTTGTAAATAAAAGTGTTGTTT
1441 TCAAAGCCATCTTTAAATAGTTCTTTAAAAATAGGTCTTTTTTTTATATTTTGGAAAAGGCATTGTTTTTAAAGTAAAGA
1521 TAAAATGGTAAGTACCTAATTGTATTTACTGTAATATCTTATAACATGCAGATGAATGCTTTATAAGTTAAATATGATGT
1601 ATTTTTTCATACTTCTGGATTATACTATAATTCATATGAAATCTTGATATTAGTCCCCACACGGAAAAAGTGAACTGCAG
1681 TTGATATTTGGTGTTTAAGATAGCACCATTGTTTAAATACCGCCTATGTACTCCCAAATGAATAAAACATAATTCTTGTC
1761 CTCTGAGAGCATAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acccgaaagAUCAGAGUCGAGa 5'
                   |: ||||||||| 
Target 5' gcagtggcgTGATCTCAGCTCa 3'
542 - 563 153.00 -16.40
2
miRNA  3' acccGAAAGAUCAGAGUCGAGa 5'
              |||| || | ||||:|: 
Target 5' gaaaCTTTATACT-TCAGTTTt 3'
1182 - 1202 129.00 -9.90
3
miRNA  3' acCCGAAAGA--UCAGAGUC-GAGa 5'
            | | ||||   | ||||| ||| 
Target 5' acGCCATTCTCCTGCCTCAGCCTCc 3'
588 - 612 126.00 -11.00
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31500827 19 COSMIC
COSN30101862 27 COSMIC
COSN31493337 65 COSMIC
COSN28187161 70 COSMIC
COSN31581806 79 COSMIC
COSN30504111 82 COSMIC
COSN30111774 86 COSMIC
COSN30147678 86 COSMIC
COSN31530112 95 COSMIC
COSN30141591 103 COSMIC
COSN27078107 104 COSMIC
COSN20105770 163 COSMIC
COSN20461129 164 COSMIC
COSN9520350 247 COSMIC
COSN30109091 248 COSMIC
COSN20451698 429 COSMIC
COSN23705044 467 COSMIC
COSN15887221 468 COSMIC
COSN6902158 919 COSMIC
COSN9520349 1198 COSMIC
COSN9776132 1279 COSMIC
COSN17617951 1380 COSMIC
COSN16776450 1415 COSMIC
COSN22868416 1478 COSMIC
COSN31962993 1485 COSMIC
COSN20105769 1555 COSMIC
COSN5230222 1699 COSMIC
COSN6597746 1742 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs759831088 1 dbSNP
rs764969795 3 dbSNP
rs774527770 3 dbSNP
rs74934875 4 dbSNP
rs1457649917 12 dbSNP
rs561674833 15 dbSNP
rs1175623891 20 dbSNP
rs1477601019 21 dbSNP
rs1350788092 23 dbSNP
rs749650049 32 dbSNP
rs1471011522 33 dbSNP
rs767565906 33 dbSNP
rs778334778 34 dbSNP
rs1447064660 36 dbSNP
rs770302529 37 dbSNP
rs746453372 43 dbSNP
rs779574321 46 dbSNP
rs1337528600 47 dbSNP
rs1335370225 48 dbSNP
rs750068948 49 dbSNP
rs564274491 71 dbSNP
rs1453839843 73 dbSNP
rs139602019 74 dbSNP
rs1374520612 77 dbSNP
rs1223356960 84 dbSNP
rs1281961287 90 dbSNP
rs1001526432 97 dbSNP
rs891476270 98 dbSNP
rs1052743487 103 dbSNP
rs1436857415 112 dbSNP
rs780307617 115 dbSNP
rs35225263 122 dbSNP
rs947519542 123 dbSNP
rs891976865 132 dbSNP
rs867032875 140 dbSNP
rs796468975 142 dbSNP
rs559457875 154 dbSNP
rs1481402304 158 dbSNP
rs1173234340 162 dbSNP
rs1395939974 163 dbSNP
rs375547063 163 dbSNP
rs201490884 164 dbSNP
rs11345830 165 dbSNP
rs200426084 165 dbSNP
rs796369169 165 dbSNP
rs868146787 165 dbSNP
rs201754632 166 dbSNP
rs1371511513 167 dbSNP
rs923049156 168 dbSNP
rs974392007 179 dbSNP
rs150587243 182 dbSNP
rs1184056502 183 dbSNP
rs761071800 185 dbSNP
rs34487767 186 dbSNP
rs1338187752 189 dbSNP
rs1241011534 192 dbSNP
rs1202052090 198 dbSNP
rs1212398319 199 dbSNP
rs1274705813 201 dbSNP
rs909103117 208 dbSNP
rs574033265 220 dbSNP
rs187097407 221 dbSNP
rs1015559015 231 dbSNP
rs1266588831 244 dbSNP
rs1232776330 246 dbSNP
rs562248584 247 dbSNP
rs1372511822 248 dbSNP
rs2241777 251 dbSNP
rs1034215962 254 dbSNP
rs1390998929 255 dbSNP
rs992441548 257 dbSNP
rs1337451455 258 dbSNP
rs1301674294 263 dbSNP
rs1367913652 266 dbSNP
rs1387785641 271 dbSNP
rs1318281846 272 dbSNP
rs116963796 273 dbSNP
rs1286496622 274 dbSNP
rs1325300320 276 dbSNP
rs1002291817 279 dbSNP
rs1247285990 281 dbSNP
rs1035767913 286 dbSNP
rs905697260 290 dbSNP
rs1001474206 296 dbSNP
rs905891370 305 dbSNP
rs576184535 313 dbSNP
rs557941952 317 dbSNP
rs1335108282 319 dbSNP
rs1448626818 320 dbSNP
rs565851271 322 dbSNP
rs1014193602 326 dbSNP
rs1021803901 335 dbSNP
rs1011840569 337 dbSNP
rs1444222195 339 dbSNP
rs1161919650 342 dbSNP
rs1327698633 358 dbSNP
rs1407720184 360 dbSNP
rs1392210856 372 dbSNP
rs565205394 378 dbSNP
rs891694700 382 dbSNP
rs1383395031 394 dbSNP
rs1443895320 398 dbSNP
rs774556062 403 dbSNP
rs1053006434 407 dbSNP
rs1321954014 417 dbSNP
rs1383221867 419 dbSNP
rs891921436 428 dbSNP
rs141758872 442 dbSNP
rs1053281720 451 dbSNP
rs1470354373 454 dbSNP
rs749653197 456 dbSNP
rs1233666986 461 dbSNP
rs778325079 468 dbSNP
rs878912062 472 dbSNP
rs904179989 476 dbSNP
rs1049981187 484 dbSNP
rs148028640 488 dbSNP
rs1268788304 489 dbSNP
rs1460953269 495 dbSNP
rs770163870 496 dbSNP
rs942984462 510 dbSNP
rs1041165439 511 dbSNP
rs1424654696 512 dbSNP
rs1294018438 514 dbSNP
rs1181528445 515 dbSNP
rs1362476400 519 dbSNP
rs1455750575 523 dbSNP
rs940293252 527 dbSNP
rs908830249 528 dbSNP
rs1468856706 529 dbSNP
rs1334181938 533 dbSNP
rs184020953 535 dbSNP
rs952865558 537 dbSNP
rs1306008973 539 dbSNP
rs192237910 542 dbSNP
rs1278625315 544 dbSNP
rs1439510362 549 dbSNP
rs539289465 550 dbSNP
rs919204035 554 dbSNP
rs1265148433 565 dbSNP
rs1483692488 569 dbSNP
rs1195453961 570 dbSNP
rs970808930 571 dbSNP
rs779369117 575 dbSNP
rs1424001990 578 dbSNP
rs1014121498 581 dbSNP
rs955844006 582 dbSNP
rs1031626748 587 dbSNP
rs1378917680 589 dbSNP
rs1401105556 595 dbSNP
rs188464949 598 dbSNP
rs376307460 601 dbSNP
rs980171784 601 dbSNP
rs969998956 605 dbSNP
rs1411402127 632 dbSNP
rs1308450272 633 dbSNP
rs1221669060 634 dbSNP
rs1021631692 641 dbSNP
rs368254292 645 dbSNP
rs1200217405 646 dbSNP
rs1049368416 648 dbSNP
rs1484189628 650 dbSNP
rs552235128 664 dbSNP
rs748475839 666 dbSNP
rs1489999750 681 dbSNP
rs1490190467 685 dbSNP
rs997010802 691 dbSNP
rs375001979 692 dbSNP
rs900895687 693 dbSNP
rs1169194971 697 dbSNP
rs1040749746 708 dbSNP
rs940228503 709 dbSNP
rs997659348 721 dbSNP
rs1431319441 726 dbSNP
rs1168974719 732 dbSNP
rs778523785 733 dbSNP
rs1402950155 734 dbSNP
rs1295249976 738 dbSNP
rs1368340314 738 dbSNP
rs902025445 740 dbSNP
rs1038768121 746 dbSNP
rs1007317620 749 dbSNP
rs887564809 750 dbSNP
rs1229489486 751 dbSNP
rs537947607 756 dbSNP
rs1291426818 757 dbSNP
rs570626103 765 dbSNP
rs1048715891 768 dbSNP
rs779291965 770 dbSNP
rs1048632985 771 dbSNP
rs1485849861 782 dbSNP
rs1185425063 783 dbSNP
rs552422295 796 dbSNP
rs928993932 804 dbSNP
rs1403804292 805 dbSNP
rs919163113 806 dbSNP
rs1384332473 807 dbSNP
rs1166720800 809 dbSNP
rs1350371343 815 dbSNP
rs931550629 818 dbSNP
rs1287179870 824 dbSNP
rs1343049033 829 dbSNP
rs1367459706 831 dbSNP
rs1299986133 833 dbSNP
rs939161673 843 dbSNP
rs926630412 850 dbSNP
rs1314669865 859 dbSNP
rs926468765 870 dbSNP
rs1230355373 871 dbSNP
rs527567518 876 dbSNP
rs980119366 879 dbSNP
rs560428475 880 dbSNP
rs753597387 885 dbSNP
rs1265622394 886 dbSNP
rs1399236531 887 dbSNP
rs980773962 890 dbSNP
rs375323033 892 dbSNP
rs971119641 894 dbSNP
rs183922803 895 dbSNP
rs1431737051 896 dbSNP
rs1242123632 897 dbSNP
rs988215479 902 dbSNP
rs1471631343 903 dbSNP
rs990146631 906 dbSNP
rs956251708 914 dbSNP
rs146626607 920 dbSNP
rs1156844199 926 dbSNP
rs763973556 928 dbSNP
rs1031469641 934 dbSNP
rs1390876337 937 dbSNP
rs561944384 941 dbSNP
rs1000526592 944 dbSNP
rs1336206561 945 dbSNP
rs543472965 950 dbSNP
rs1214101357 951 dbSNP
rs1326007622 965 dbSNP
rs760473354 977 dbSNP
rs1007764225 992 dbSNP
rs143898588 998 dbSNP
rs1222468113 1005 dbSNP
rs767422285 1008 dbSNP
rs1330480292 1010 dbSNP
rs996547440 1014 dbSNP
rs768934069 1028 dbSNP
rs759679184 1045 dbSNP
rs1040813413 1048 dbSNP
rs1297054584 1049 dbSNP
rs749259996 1051 dbSNP
rs73287910 1079 dbSNP
rs1056278997 1083 dbSNP
rs1414064709 1085 dbSNP
rs887287370 1089 dbSNP
rs1472915152 1096 dbSNP
rs1361170433 1100 dbSNP
rs1175783231 1116 dbSNP
rs1048515878 1117 dbSNP
rs774626382 1121 dbSNP
rs1454381445 1122 dbSNP
rs1416316905 1124 dbSNP
rs1335136558 1153 dbSNP
rs34779739 1159 dbSNP
rs1354258756 1164 dbSNP
rs749453211 1167 dbSNP
rs1440437176 1168 dbSNP
rs546016499 1170 dbSNP
rs572635794 1173 dbSNP
rs1045711708 1177 dbSNP
rs1223505496 1185 dbSNP
rs949446888 1189 dbSNP
rs1044870034 1209 dbSNP
rs113718139 1212 dbSNP
rs62527061 1219 dbSNP
rs1427340263 1220 dbSNP
rs1278921920 1225 dbSNP
rs1172602695 1233 dbSNP
rs1253779246 1236 dbSNP
rs1483307932 1252 dbSNP
rs917920305 1260 dbSNP
rs1245011087 1261 dbSNP
rs988226907 1265 dbSNP
rs935368643 1266 dbSNP
rs1479059740 1272 dbSNP
rs924450788 1274 dbSNP
rs1419031933 1277 dbSNP
rs771250208 1279 dbSNP
rs1170869424 1280 dbSNP
rs1371575147 1290 dbSNP
rs572034849 1329 dbSNP
rs1185248657 1332 dbSNP
rs990651097 1337 dbSNP
rs978592629 1338 dbSNP
rs968937268 1344 dbSNP
rs1274968693 1348 dbSNP
rs1028268117 1350 dbSNP
rs1061195 1357 dbSNP
rs1202681731 1360 dbSNP
rs1276427114 1363 dbSNP
rs138297749 1369 dbSNP
rs1221584287 1378 dbSNP
rs965018156 1380 dbSNP
rs538482719 1381 dbSNP
rs1306346610 1383 dbSNP
rs1199664756 1389 dbSNP
rs1017899393 1393 dbSNP
rs986280726 1395 dbSNP
rs73287908 1400 dbSNP
rs1027378830 1408 dbSNP
rs1383323352 1409 dbSNP
rs1424447454 1411 dbSNP
rs775110224 1417 dbSNP
rs993663880 1427 dbSNP
rs886836383 1428 dbSNP
rs1323576828 1429 dbSNP
rs865981169 1432 dbSNP
rs995719431 1435 dbSNP
rs1034647695 1437 dbSNP
rs1169015486 1439 dbSNP
rs1446940356 1443 dbSNP
rs1282277007 1445 dbSNP
rs1358369726 1457 dbSNP
rs1210375933 1460 dbSNP
rs1283572021 1472 dbSNP
rs537912656 1472 dbSNP
rs1210771613 1474 dbSNP
rs1248857172 1478 dbSNP
rs570587029 1485 dbSNP
rs905098352 1486 dbSNP
rs1370575238 1488 dbSNP
rs905350544 1495 dbSNP
rs1183356545 1499 dbSNP
rs558767212 1500 dbSNP
rs1158527820 1509 dbSNP
rs1252238139 1520 dbSNP
rs534030948 1527 dbSNP
rs1195980791 1529 dbSNP
rs1045358598 1544 dbSNP
rs1249093736 1549 dbSNP
rs946539509 1551 dbSNP
rs142561194 1554 dbSNP
rs150184068 1556 dbSNP
rs1054506014 1562 dbSNP
rs111398011 1563 dbSNP
rs33925179 1563 dbSNP
rs779556609 1563 dbSNP
rs540536258 1568 dbSNP
rs896496375 1568 dbSNP
rs1052404812 1570 dbSNP
rs1268922048 1571 dbSNP
rs1314218373 1573 dbSNP
rs12546452 1581 dbSNP
rs925380301 1583 dbSNP
rs986394903 1587 dbSNP
rs1443375188 1594 dbSNP
rs569826806 1597 dbSNP
rs952213359 1600 dbSNP
rs1309451410 1608 dbSNP
rs1473894655 1608 dbSNP
rs781071841 1611 dbSNP
rs1412086861 1613 dbSNP
rs1465175636 1615 dbSNP
rs947282425 1618 dbSNP
rs1404031624 1619 dbSNP
rs921059674 1627 dbSNP
rs1307226636 1634 dbSNP
rs1348554882 1636 dbSNP
rs1028242577 1640 dbSNP
rs975367098 1644 dbSNP
rs1372746850 1646 dbSNP
rs965239947 1650 dbSNP
rs1019258073 1655 dbSNP
rs972300054 1656 dbSNP
rs529957433 1660 dbSNP
rs773659685 1662 dbSNP
rs962094203 1663 dbSNP
rs1034762369 1664 dbSNP
rs1003137922 1678 dbSNP
rs969038688 1681 dbSNP
rs1183545320 1687 dbSNP
rs1251862188 1695 dbSNP
rs374476983 1699 dbSNP
rs1365864550 1702 dbSNP
rs1378971615 1708 dbSNP
rs1061196 1711 dbSNP
rs893762421 1714 dbSNP
rs1026770651 1719 dbSNP
rs1411539142 1722 dbSNP
rs995661372 1722 dbSNP
rs905362650 1724 dbSNP
rs1024188995 1726 dbSNP
rs549788361 1737 dbSNP
rs1303577988 1749 dbSNP
rs1013858499 1753 dbSNP
rs182124050 1756 dbSNP
rs148926574 1759 dbSNP
rs546072883 1760 dbSNP
rs999554054 1766 dbSNP
rs1344800293 1769 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048188. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_ptb_knockdown ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048188
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_ptb_knockdown
Location of target site ENST00000297578.4 | 3UTR | CACUGCAACCUCCACCUCCCGGGUUCACGCCAUUCU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
118 hsa-miR-3160-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT066658 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT075318 SF3B3 splicing factor 3b subunit 3 2 4
MIRT077083 EIF1 eukaryotic translation initiation factor 1 2 2
MIRT100381 HSPA1B heat shock protein family A (Hsp70) member 1B 2 6
MIRT135259 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT184913 ZNF268 zinc finger protein 268 2 2
MIRT218862 CDKN1A cyclin dependent kinase inhibitor 1A 2 2
MIRT446580 FPR2 formyl peptide receptor 2 2 2
MIRT448834 FGD4 FYVE, RhoGEF and PH domain containing 4 2 2
MIRT449455 RNF13 ring finger protein 13 2 2
MIRT452284 CARD8 caspase recruitment domain family member 8 2 2
MIRT452628 FAM162A family with sequence similarity 162 member A 2 2
MIRT453454 GLG1 golgi glycoprotein 1 2 2
MIRT454188 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 6
MIRT454434 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT454575 NT5DC3 5'-nucleotidase domain containing 3 2 2
MIRT455555 TRAF1 TNF receptor associated factor 1 2 6
MIRT455841 MPL MPL proto-oncogene, thrombopoietin receptor 2 6
MIRT455969 BCAS4 breast carcinoma amplified sequence 4 2 4
MIRT456805 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457320 DUSP19 dual specificity phosphatase 19 2 2
MIRT457366 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457684 ZNF587 zinc finger protein 587 2 2
MIRT458158 LYRM4 LYR motif containing 4 2 6
MIRT458641 SGPP2 sphingosine-1-phosphate phosphatase 2 2 2
MIRT459134 FADS6 fatty acid desaturase 6 2 2
MIRT459153 NARF nuclear prelamin A recognition factor 2 4
MIRT460460 NOM1 nucleolar protein with MIF4G domain 1 2 4
MIRT460974 STK17B serine/threonine kinase 17b 2 2
MIRT461439 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT461507 NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 2 2
MIRT462490 GSR glutathione-disulfide reductase 2 2
MIRT462638 PHF5A PHD finger protein 5A 2 2
MIRT463279 ZFX zinc finger protein, X-linked 2 2
MIRT463360 ZFAND4 zinc finger AN1-type containing 4 2 2
MIRT465777 TMOD3 tropomodulin 3 2 2
MIRT466143 TMEM120B transmembrane protein 120B 2 2
MIRT468401 SETD3 SET domain containing 3 2 2
MIRT468998 RNPS1 RNA binding protein with serine rich domain 1 2 2
MIRT471574 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT472108 NME2 NME/NM23 nucleoside diphosphate kinase 2 2 2
MIRT472125 NME1-NME2 NME1-NME2 readthrough 2 2
MIRT473020 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT473083 MORN4 MORN repeat containing 4 2 2
MIRT475598 HMGB2 high mobility group box 2 2 4
MIRT475937 GXYLT2 glucoside xylosyltransferase 2 2 8
MIRT476117 GPR157 G protein-coupled receptor 157 2 2
MIRT476406 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT478003 DNAL1 dynein axonemal light chain 1 2 2
MIRT487969 IQSEC2 IQ motif and Sec7 domain 2 2 2
MIRT489418 TUBB2A tubulin beta 2A class IIa 2 2
MIRT491522 IL10RA interleukin 10 receptor subunit alpha 2 2
MIRT492673 PLEC plectin 2 2
MIRT493545 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT513085 USP9X ubiquitin specific peptidase 9, X-linked 2 2
MIRT514009 CECR2 CECR2, histone acetyl-lysine reader 2 4
MIRT516683 ZNF860 zinc finger protein 860 2 2
MIRT518392 ZNF250 zinc finger protein 250 2 2
MIRT522683 LUZP1 leucine zipper protein 1 2 6
MIRT524488 CEP97 centrosomal protein 97 2 2
MIRT527457 CLEC12B C-type lectin domain family 12 member B 2 2
MIRT527705 IL17REL interleukin 17 receptor E like 2 2
MIRT531647 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT532381 UMPS uridine monophosphate synthetase 2 2
MIRT532588 MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 2 2
MIRT533555 TPM4 tropomyosin 4 2 2
MIRT548371 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 4
MIRT550250 PVR poliovirus receptor 2 2
MIRT552555 ZFP36L2 ZFP36 ring finger protein like 2 2 4
MIRT554113 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT554131 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT561344 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT561638 RUNX3 runt related transcription factor 3 2 2
MIRT566497 PBX2P1 PBX homeobox 2 pseudogene 1 2 2
MIRT570583 OTUD7B OTU deubiquitinase 7B 2 2
MIRT572731 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT574041 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT575231 Fut1 fucosyltransferase 1 2 2
MIRT606811 BICD2 BICD cargo adaptor 2 2 2
MIRT621016 CLSTN3 calsyntenin 3 2 2
MIRT637852 PDCL3 phosducin like 3 2 2
MIRT640477 ZNF557 zinc finger protein 557 2 2
MIRT642827 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT643887 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT664874 PCNXL2 pecanex homolog 2 2 2
MIRT680528 PRIM2 DNA primase subunit 2 2 2
MIRT680648 KIAA1456 KIAA1456 2 2
MIRT680807 ZNF578 zinc finger protein 578 2 2
MIRT680921 STX2 syntaxin 2 2 2
MIRT681112 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT681147 INTS7 integrator complex subunit 7 2 2
MIRT681966 TFCP2 transcription factor CP2 2 2
MIRT684316 GTF3C4 general transcription factor IIIC subunit 4 2 2
MIRT684906 GSG2 histone H3 associated protein kinase 2 2
MIRT685499 MED16 mediator complex subunit 16 2 2
MIRT685929 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686875 SLC25A32 solute carrier family 25 member 32 2 2
MIRT688204 FNIP1 folliculin interacting protein 1 2 2
MIRT688791 CCNB1 cyclin B1 2 2
MIRT689227 RPS19 ribosomal protein S19 2 2
MIRT690470 ZNF33A zinc finger protein 33A 2 2
MIRT691982 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 2 2
MIRT694006 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694529 TRIM72 tripartite motif containing 72 2 2
MIRT695420 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT695784 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT697799 UBXN2A UBX domain protein 2A 2 2
MIRT698275 TMEM2 transmembrane protein 2 2 2
MIRT698317 TMEM136 transmembrane protein 136 2 2
MIRT699971 RREB1 ras responsive element binding protein 1 2 2
MIRT700717 PNO1 partner of NOB1 homolog 2 2
MIRT701721 MTMR12 myotubularin related protein 12 2 2
MIRT701879 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT702959 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT706178 ZNF716 zinc finger protein 716 2 2
MIRT706463 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT718154 TTC33 tetratricopeptide repeat domain 33 2 2
MIRT718711 ANKRD18A ankyrin repeat domain 18A 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3160-3p Gefitinib 123631 NSC715055 approved resistant cell line (PC9)
hsa-miR-3160-3p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-3160-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-3160-3p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-3160-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3160-3p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide resistant cell line (Bads-200)

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