pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol KIAA1328   
Synonyms -
Description KIAA1328
Transcript NM_020776   
Expression
Putative miRNA Targets on KIAA1328
3'UTR of KIAA1328
(miRNA target sites are highlighted)
>KIAA1328|NM_020776|3'UTR
   1 CATATTGCAAAATTTTCTTAGGAAATTTGTGGGTTTCCTCACATACTGATCTAGGATTTTAAATTATTTCATTGCAAAGT
  81 AATTGTGTCTCTCCTTTCACGGGGACTTGTCTCACTAGCATCCTGTTACGTATTGAATATAGAAATCATTCTAACAACCC
 161 AGGTTATTTTCAATCAGACCAGGCATTCGATAACACACTAAGGGGGTAGGAATGGAAGATGGTATCTTTTATATGCTAAA
 241 CAGATTAGAAAATTAACATAGGATACTTTCTGCGTGGTGGAAACCATTGCATATTCAGCCTCATTTCAAGAGTGTTTCCT
 321 TCTCAAACTTCTGCTAGAAAATGCTGACTCACTTTTATATACAAGAAAAACCTTTCCACTGAAAAATCCCTCTGATTTAA
 401 AAGTAACCCCTTTGAAACATAAGCAGTTTCAGAAAGGCAGACTCTCTCATCTTTCTCATCCTGTTCTCTCACTACTACAT
 481 TTCTGTAAGTGGTCCTTTAATTCTGAAGTTGGAGTTGGTGCCCCTGCCATCACAAACAACACGAGAGCCAATTGTGAGTC
 561 AGTCTCAGTAGCCATCAGCCTGGCAGCTGCCCATCCCATAACCAAAGAGCTCAATGGGCTGGAGGGTGAGACCCAGCCAA
 641 TCCTTGGGAGCAAGCAGCACTAAATCACATCAGGGAGTGATTAGTCCTGGGGAAATTCAGTGGAGGCACAAGCCTGAAGC
 721 ACTCTTCTACCAATGTTTGGGTGACCACCCCTCCAATATCCCAGAATGAATAAGAACAATCCCTAGGTATTTTTATTTAC
 801 CCAAGTGTTCAGCTTATTCACCCCACCCCCCCACCCCCCATCACACGTGCTCCTGTGAACTTTCCATGGTTATGTCTACG
 881 GAAAATGCCACTAGAGAGAGAGTGATGCAAGCTGCTGCAAAGCTGATGGGCTTCCTCTGGCCCTCCCTTTTCCTCCACGA
 961 GGATTAAAGGATACAAGCTGACCAGGCCTCACAGGTGCTCTGCTCGTGGCCCCAAAGAACCATCTCTACTTGCCAGAGTA
1041 TGTTCCACCACCCAAGCAGGGTCTCCCTACTTTTTCTCACTGGCCTCGTTTTGACCCAGAGAAAGCCTATGGAAGTTATG
1121 CAGTGCAGACCTCATCCTGTCTGCTGTCTTTTCTCCCACAGAGCTCTTGAGATGGGTCCTTCAGCTTGCAGTGGTCCCTA
1201 GTAGCCTCTCAAGCTAATGGGGATGATGATCCTGGTTTAGCCAGAGTTCAAAACTCTCCAGTCATTGAAAGCAAGGGGAG
1281 GGTGTGTTCCCAGATGTGTATTACTTGGGAATTTTATTTGATCTGGAGGGTGTGGCTTTTTTTCTCTCCTTTTTACCAAC
1361 CCCAACTAAACTGGGAGTAAGACTTAGTCAGTGTTGGTAGACAAAGTCATACCACCCAGGGCAGCCTGCATGCAGCGAGT
1441 CTGCGTGGCTTCCCTGAATTACTCTTTTAATTAAAACTAGATTATTTCAATCTAGAAAAGCCTTGTTGAGCAGCCTCCTT
1521 ATCCAGATAGATCCAAAGCTCATGTCTCTTCAGGCTGAGACTGGCGCTGTCACCTCCACCCAGCCTTCTTTCACTTGGGG
1601 TTTTTTATTCTTTGGAGTAGAAAAGAATGGAGCCCACTAATATTATATTTTTCTTCTGAAATAAATATAAAGTCAAGACT
1681 AACTAGTTATAATCATTCCCTTAAAAAGTTGGAAAATCATTACAGATTAAAATTTCTTTATAAAGTTCACCTCTGAGAGT
1761 AACCAAATCGGTTTCATCCCATATCAAAAAGCCTTTGGAGTGTGGAGCTTTCTGTGGTATGGCAGAAATGGGTGGATGGC
1841 AAACTAAGAGCCCTCAGCCATTTTTTCAGTTAAAGTTAGGTTGCCAGAACTTTCTTTTCCTTGCCCCCTGTGTCATGACT
1921 AGCTTAAGTGTACTTGACTCCCATAGACTACTCCCATGCCCACAGTCACCCATTCCAGACTCCAGTGTCCTTAAAACTCT
2001 GGAGTGAGAGGATGCCAGAGGATCAAGAAAAGGATCACAGTTTCTTGAAGAAGCTTGTTTGCCTTTAGAAGAATCGTAAA
2081 CAGAGTCTAAACTAAAGGCTTTTTGGGGGTCACAGCCACAGAGTGGAGTTTTATTGCTTCTTTGCCTCTCCATGAATGGC
2161 CAATTTGGAAAAGCAGAGATGGGCTTTCAGCAGAATATCAACCAATACATTTTTCACATGCAAAACTCATCACCAGTTGC
2241 CTTTTTCTAACTTAATGGACATTTTGTTGGTGTTGGTGCAAGGGCAATAGGATGTAAATTTGTATATAATCTAATGTCTT
2321 CATTATTAATTGAATAGTACATGTTAACATTTTAATCTATTTAAATTTACTTTGAAATATATACATACATATGAATGAAA
2401 GGTTGTTACAGAGCCTCAAAGCTGTTGCAGACTATCCCAAGAGAAAGGATCTGGCACAAAGGAATCTGCCTTTCCTCCGT
2481 CTCAAGTCTCCCACCCTTGACTGGTTGGGATTTGCTCGTCCAGCCTCTAGACACTTCCCAAAGCAAGACTGGACACATGC
2561 CGAGGGCGTTGCGGATAGTGCCTCACCATTGCCCACCCTGCTGCCCAACTCCTGTGAGAGAAAAACCAATCAATGTTTAC
2641 AAAATGGAAAAGGACACAGCATGTCCTTTGAACTCCCTAAGTAAGGCCCACAGTTCTTGATGCAGAGAACCAAAGTGAAT
2721 CATAGAAAAGCTTTTGCTAACAGTCCGCTTTCCAGGAGGCAAACTTGTGTTTATCCAAACCTGATCCCCATGATGGGGAC
2801 TTTTCTAGAGCACCCCAAATGTCATGGGGAGAGAGGGACTCTTTCTGCTCCCTCAGAGCTACTCTTCACTTGTCCCTGCT
2881 TCCGGCACCAAGTTCATAATAGAGATCTTCTGGCCAGAGAATCAGGGGAGAGGAGAGGCCTGATGGGGCAGAGCTGGACG
2961 AAGTCTGCTAAGAGAGATGGAGGCTGTGGCGGACTCCTTCCAACTCACGATTTATCCTCAGCTCAGAGTGTATTTTGAAT
3041 ATGAGCAAATGTTTATGTACGTATGAGATTTCAAGTTAATAAATCATCTCTATGGCTAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            ||| |:|||  :|||||| 
Target 5' tcTGCTGTCTT-TTCTCCCAc 3'
1140 - 1159 146.00 -22.00
2
miRNA  3' ugACGUCGGA-A-C--UGGAGGGUc 5'
            | |||||| | |  ||:||||| 
Target 5' cgTCCAGCCTCTAGACACTTCCCAa 3'
2517 - 2541 145.00 -17.70
3
miRNA  3' ugACGUC-----GGA--ACUGGAGGGUc 5'
            |||||     |||  | :||||:|| 
Target 5' ctTGCAGTGGTCCCTAGTAGCCTCTCAa 3'
1185 - 1212 141.00 -16.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31548495 90 COSMIC
COSN30122317 98 COSMIC
COSN30125470 102 COSMIC
COSN31585178 189 COSMIC
COSN1205429 198 COSMIC
COSN27129321 603 COSMIC
COSN7357120 769 COSMIC
COSN6416262 859 COSMIC
COSN6664366 881 COSMIC
COSN15230811 1130 COSMIC
COSN8678331 1130 COSMIC
COSN18976951 1657 COSMIC
COSN8250398 1660 COSMIC
COSN17181580 1931 COSMIC
COSN25719772 2149 COSMIC
COSN27025657 2214 COSMIC
COSN17075861 2561 COSMIC
COSN15668377 2745 COSMIC
COSN20114927 2925 COSMIC
rs2017027 3005 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1465958017 5 dbSNP
rs774479072 6 dbSNP
rs758776943 9 dbSNP
rs926177586 9 dbSNP
rs747028179 11 dbSNP
rs367550105 15 dbSNP
rs1053777921 17 dbSNP
rs1158233278 21 dbSNP
rs1345981314 27 dbSNP
rs1415661448 30 dbSNP
rs1053707024 33 dbSNP
rs1291845997 34 dbSNP
rs1388579594 41 dbSNP
rs894003640 62 dbSNP
rs1158567699 63 dbSNP
rs1438308056 71 dbSNP
rs1417486623 75 dbSNP
rs1179593704 79 dbSNP
rs891931724 86 dbSNP
rs1012406900 101 dbSNP
rs1212578192 104 dbSNP
rs116461638 105 dbSNP
rs1401519940 115 dbSNP
rs1283738634 122 dbSNP
rs906747327 127 dbSNP
rs544162044 130 dbSNP
rs78344684 131 dbSNP
rs573579866 143 dbSNP
rs1027299515 150 dbSNP
rs887704078 154 dbSNP
rs1300700018 156 dbSNP
rs1449861006 159 dbSNP
rs1359384596 171 dbSNP
rs1157466411 174 dbSNP
rs1417343411 176 dbSNP
rs972500339 180 dbSNP
rs1004769339 184 dbSNP
rs542567995 187 dbSNP
rs141051093 189 dbSNP
rs1353224017 190 dbSNP
rs1006824190 194 dbSNP
rs1412154746 198 dbSNP
rs952688274 199 dbSNP
rs960525732 204 dbSNP
rs1483664042 205 dbSNP
rs187536164 211 dbSNP
rs1662906 219 dbSNP
rs1240856817 222 dbSNP
rs1320885303 224 dbSNP
rs1317088562 225 dbSNP
rs970053216 227 dbSNP
rs1229830488 239 dbSNP
rs980525798 245 dbSNP
rs537180820 257 dbSNP
rs976624637 263 dbSNP
rs1280734762 265 dbSNP
rs757695401 274 dbSNP
rs559330237 275 dbSNP
rs1361961414 277 dbSNP
rs1210970921 303 dbSNP
rs1256856561 328 dbSNP
rs192808978 340 dbSNP
rs1196144959 342 dbSNP
rs115993757 353 dbSNP
rs1191828449 358 dbSNP
rs1449988824 362 dbSNP
rs1478835517 363 dbSNP
rs1264075917 365 dbSNP
rs1209322582 367 dbSNP
rs1040172778 372 dbSNP
rs1263631578 373 dbSNP
rs1223440077 377 dbSNP
rs1475292095 379 dbSNP
rs1166509582 382 dbSNP
rs529282514 390 dbSNP
rs1787627 395 dbSNP
rs1341834714 397 dbSNP
rs1278206677 400 dbSNP
rs1385748028 401 dbSNP
rs1389144239 404 dbSNP
rs1458707797 408 dbSNP
rs1400098125 419 dbSNP
rs1049211444 442 dbSNP
rs1312764819 447 dbSNP
rs184970117 452 dbSNP
rs1401243575 461 dbSNP
rs1431538301 463 dbSNP
rs1298437397 469 dbSNP
rs1005246783 475 dbSNP
rs1468742135 484 dbSNP
rs1257264587 493 dbSNP
rs906794387 499 dbSNP
rs1276374024 500 dbSNP
rs1003828422 503 dbSNP
rs1345679850 507 dbSNP
rs1218607418 509 dbSNP
rs1278038200 514 dbSNP
rs1013352519 515 dbSNP
rs1015167332 517 dbSNP
rs1304024897 524 dbSNP
rs1023398745 525 dbSNP
rs896864782 526 dbSNP
rs1329657922 528 dbSNP
rs993827368 532 dbSNP
rs115385528 534 dbSNP
rs952471343 538 dbSNP
rs1218798748 541 dbSNP
rs985710177 543 dbSNP
rs150128999 544 dbSNP
rs1033468151 552 dbSNP
rs1454610367 559 dbSNP
rs965565368 562 dbSNP
rs976673822 574 dbSNP
rs1176493002 576 dbSNP
rs1458949880 579 dbSNP
rs923851176 583 dbSNP
rs1250755938 585 dbSNP
rs1199571680 599 dbSNP
rs571897979 603 dbSNP
rs956711907 605 dbSNP
rs1342254792 610 dbSNP
rs989497672 615 dbSNP
rs1248852523 622 dbSNP
rs913467761 626 dbSNP
rs1307749607 627 dbSNP
rs1449416324 629 dbSNP
rs1336772283 637 dbSNP
rs1333734984 652 dbSNP
rs1394579340 659 dbSNP
rs1478533553 673 dbSNP
rs1303448324 678 dbSNP
rs1173577350 707 dbSNP
rs201616043 710 dbSNP
rs966261748 711 dbSNP
rs915331092 712 dbSNP
rs948136007 716 dbSNP
rs1045545443 723 dbSNP
rs1441294497 724 dbSNP
rs537614792 730 dbSNP
rs939498238 733 dbSNP
rs557386518 734 dbSNP
rs1257862284 741 dbSNP
rs1331490481 742 dbSNP
rs931725096 747 dbSNP
rs1439811938 752 dbSNP
rs1284472106 755 dbSNP
rs898046667 756 dbSNP
rs1351841029 759 dbSNP
rs1379018915 760 dbSNP
rs1048801516 761 dbSNP
rs1243089575 769 dbSNP
rs993851969 773 dbSNP
rs1399445920 783 dbSNP
rs138217393 788 dbSNP
rs1296257302 798 dbSNP
rs1402305094 799 dbSNP
rs1048028769 801 dbSNP
rs1162381593 803 dbSNP
rs1471706267 804 dbSNP
rs1242476494 808 dbSNP
rs1188271434 811 dbSNP
rs1036258413 813 dbSNP
rs888097009 814 dbSNP
rs1218173162 826 dbSNP
rs71381582 826 dbSNP
rs896424072 826 dbSNP
rs999805645 826 dbSNP
rs1261360372 827 dbSNP
rs1208396076 828 dbSNP
rs1013425610 829 dbSNP
rs1218316395 831 dbSNP
rs1338515818 832 dbSNP
rs1280108128 833 dbSNP
rs1030785439 834 dbSNP
rs1382930175 837 dbSNP
rs1326911534 838 dbSNP
rs1203635901 840 dbSNP
rs1180666915 841 dbSNP
rs1452555036 842 dbSNP
rs1193403065 844 dbSNP
rs1251746480 846 dbSNP
rs1403363242 847 dbSNP
rs1396481614 848 dbSNP
rs375739832 858 dbSNP
rs1165187369 865 dbSNP
rs1006664038 867 dbSNP
rs1044880923 869 dbSNP
rs867178420 880 dbSNP
rs1786059 881 dbSNP
rs1362739267 893 dbSNP
rs1475476054 893 dbSNP
rs1468110987 900 dbSNP
rs1246609738 919 dbSNP
rs1197434450 926 dbSNP
rs997939561 927 dbSNP
rs1030877554 928 dbSNP
rs1274273041 931 dbSNP
rs1164647060 932 dbSNP
rs1390917882 939 dbSNP
rs1316241586 945 dbSNP
rs1002061897 953 dbSNP
rs1215206902 954 dbSNP
rs1344456790 956 dbSNP
rs542947277 959 dbSNP
rs989454209 960 dbSNP
rs536153708 974 dbSNP
rs3747899 976 dbSNP
rs969778290 978 dbSNP
rs149158097 983 dbSNP
rs1020269021 987 dbSNP
rs980919433 994 dbSNP
rs966292373 999 dbSNP
rs976291950 1005 dbSNP
rs928030978 1007 dbSNP
rs939509731 1010 dbSNP
rs1171333902 1013 dbSNP
rs1455915049 1024 dbSNP
rs1306141934 1025 dbSNP
rs1254200384 1031 dbSNP
rs1335261825 1036 dbSNP
rs780201538 1041 dbSNP
rs546433487 1050 dbSNP
rs747246045 1052 dbSNP
rs1286242458 1068 dbSNP
rs984976233 1070 dbSNP
rs8085064 1074 dbSNP
rs143247580 1088 dbSNP
rs1276505810 1089 dbSNP
rs1221026960 1090 dbSNP
rs1213517021 1097 dbSNP
rs544352077 1110 dbSNP
rs1304111953 1124 dbSNP
rs1459340487 1138 dbSNP
rs1239126071 1147 dbSNP
rs1374452355 1153 dbSNP
rs1299513804 1164 dbSNP
rs1442574464 1165 dbSNP
rs1358224362 1172 dbSNP
rs1331568022 1178 dbSNP
rs930910647 1182 dbSNP
rs1199845147 1183 dbSNP
rs1396176378 1192 dbSNP
rs971715834 1194 dbSNP
rs1049759521 1201 dbSNP
rs561030592 1202 dbSNP
rs1178140793 1211 dbSNP
rs949345705 1226 dbSNP
rs1416791455 1240 dbSNP
rs1235969426 1252 dbSNP
rs888155972 1256 dbSNP
rs905056473 1259 dbSNP
rs189428409 1261 dbSNP
rs1368741305 1277 dbSNP
rs768375799 1278 dbSNP
rs1474662751 1287 dbSNP
rs1162574276 1288 dbSNP
rs1351229634 1291 dbSNP
rs546571171 1292 dbSNP
rs1224144276 1298 dbSNP
rs936499397 1325 dbSNP
rs900890078 1327 dbSNP
rs181026750 1336 dbSNP
rs1297543411 1344 dbSNP
rs1394243264 1355 dbSNP
rs1298115565 1374 dbSNP
rs1010292241 1375 dbSNP
rs1347473877 1386 dbSNP
rs1020298535 1388 dbSNP
rs776286878 1390 dbSNP
rs1411862959 1392 dbSNP
rs901840657 1395 dbSNP
rs1030764499 1397 dbSNP
rs1262659255 1406 dbSNP
rs997801441 1407 dbSNP
rs1007642855 1408 dbSNP
rs28676465 1410 dbSNP
rs1287282367 1416 dbSNP
rs1234823348 1419 dbSNP
rs984992999 1423 dbSNP
rs1397614285 1432 dbSNP
rs1010850113 1437 dbSNP
rs528473045 1438 dbSNP
rs969449589 1441 dbSNP
rs981146963 1446 dbSNP
rs551927406 1448 dbSNP
rs1167371202 1462 dbSNP
rs917618415 1465 dbSNP
rs1035114461 1476 dbSNP
rs139074124 1496 dbSNP
rs537258242 1498 dbSNP
rs919449181 1502 dbSNP
rs1263733043 1509 dbSNP
rs1187092502 1515 dbSNP
rs1488030215 1523 dbSNP
rs1250832513 1528 dbSNP
rs557578591 1531 dbSNP
rs1257565887 1545 dbSNP
rs1335020774 1558 dbSNP
rs1257064864 1562 dbSNP
rs926579090 1566 dbSNP
rs930796455 1567 dbSNP
rs1296904320 1568 dbSNP
rs1386773915 1573 dbSNP
rs1366123302 1574 dbSNP
rs936557090 1578 dbSNP
rs1185366782 1584 dbSNP
rs1053636617 1589 dbSNP
rs28639668 1592 dbSNP
rs1478064405 1601 dbSNP
rs910758470 1607 dbSNP
rs1373781725 1611 dbSNP
rs942382064 1621 dbSNP
rs536986899 1626 dbSNP
rs1175458028 1627 dbSNP
rs1432466813 1633 dbSNP
rs1393217550 1634 dbSNP
rs1371319375 1637 dbSNP
rs1467497403 1646 dbSNP
rs1468782681 1656 dbSNP
rs1173052760 1659 dbSNP
rs1237167481 1669 dbSNP
rs946152328 1669 dbSNP
rs1041815354 1678 dbSNP
rs1251319702 1685 dbSNP
rs901873257 1691 dbSNP
rs1346285205 1712 dbSNP
rs1306313274 1720 dbSNP
rs1414183437 1722 dbSNP
rs1376698861 1735 dbSNP
rs1039751773 1739 dbSNP
rs900945583 1743 dbSNP
rs1397500247 1745 dbSNP
rs1029383764 1752 dbSNP
rs933773230 1754 dbSNP
rs184233403 1759 dbSNP
rs572525311 1761 dbSNP
rs1295276439 1770 dbSNP
rs1016434120 1771 dbSNP
rs1236107553 1774 dbSNP
rs1281600308 1777 dbSNP
rs1379529884 1786 dbSNP
rs1346528175 1793 dbSNP
rs962179745 1810 dbSNP
rs1208096983 1813 dbSNP
rs1420448164 1814 dbSNP
rs1250830177 1818 dbSNP
rs971818696 1821 dbSNP
rs1024663804 1835 dbSNP
rs1185759596 1856 dbSNP
rs544567715 1869 dbSNP
rs1278087784 1884 dbSNP
rs1241652564 1886 dbSNP
rs1336535813 1890 dbSNP
rs1259440277 1891 dbSNP
rs1434640313 1894 dbSNP
rs753650608 1895 dbSNP
rs980418332 1895 dbSNP
rs1011148030 1899 dbSNP
rs1434253847 1904 dbSNP
rs1171828240 1905 dbSNP
rs1377416322 1906 dbSNP
rs957984455 1908 dbSNP
rs1435187776 1911 dbSNP
rs989800831 1917 dbSNP
rs1455184745 1933 dbSNP
rs1022220081 1945 dbSNP
rs1454473430 1971 dbSNP
rs1473935450 1981 dbSNP
rs1258918965 1984 dbSNP
rs773231137 1986 dbSNP
rs945178519 2004 dbSNP
rs1288467372 2005 dbSNP
rs1360338172 2007 dbSNP
rs1207228951 2011 dbSNP
rs1388823449 2049 dbSNP
rs1304896539 2050 dbSNP
rs1351909671 2051 dbSNP
rs1265072753 2074 dbSNP
rs1231762980 2076 dbSNP
rs905071199 2077 dbSNP
rs1370892116 2080 dbSNP
rs1041847130 2094 dbSNP
rs1325748406 2100 dbSNP
rs1002222871 2105 dbSNP
rs933360596 2109 dbSNP
rs376616703 2111 dbSNP
rs1316949116 2112 dbSNP
rs1163947716 2113 dbSNP
rs1214662909 2116 dbSNP
rs1035047619 2119 dbSNP
rs1459491195 2139 dbSNP
rs558238275 2140 dbSNP
rs889074664 2145 dbSNP
rs972181618 2147 dbSNP
rs1026391332 2154 dbSNP
rs762316709 2157 dbSNP
rs1321722111 2158 dbSNP
rs985323799 2160 dbSNP
rs910821533 2164 dbSNP
rs1214086994 2165 dbSNP
rs1252358266 2168 dbSNP
rs1038346870 2175 dbSNP
rs1212224885 2183 dbSNP
rs943590816 2184 dbSNP
rs976350256 2207 dbSNP
rs1218061716 2216 dbSNP
rs1337592591 2220 dbSNP
rs1452475272 2225 dbSNP
rs1191872053 2227 dbSNP
rs1326964022 2239 dbSNP
rs1324913901 2240 dbSNP
rs142978608 2245 dbSNP
rs933658579 2270 dbSNP
rs1396181835 2277 dbSNP
rs1419698268 2284 dbSNP
rs564492933 2285 dbSNP
rs754866118 2288 dbSNP
rs543972001 2289 dbSNP
rs1052170125 2305 dbSNP
rs892181738 2307 dbSNP
rs946573851 2311 dbSNP
rs957933050 2315 dbSNP
rs1326971166 2316 dbSNP
rs989440212 2328 dbSNP
rs765996717 2330 dbSNP
rs1394450752 2340 dbSNP
rs1470144378 2342 dbSNP
rs1043927666 2349 dbSNP
rs1198319466 2357 dbSNP
rs905011291 2359 dbSNP
rs1002554244 2360 dbSNP
rs375600629 2370 dbSNP
rs1312040090 2379 dbSNP
rs913802794 2382 dbSNP
rs1215259285 2383 dbSNP
rs1034932383 2384 dbSNP
rs1302631409 2389 dbSNP
rs774078161 2392 dbSNP
rs1231773586 2402 dbSNP
rs1372984784 2402 dbSNP
rs993460411 2403 dbSNP
rs1026402132 2408 dbSNP
rs952202629 2422 dbSNP
rs966593193 2429 dbSNP
rs1373448916 2431 dbSNP
rs528434015 2438 dbSNP
rs1222636893 2449 dbSNP
rs1172371416 2459 dbSNP
rs1304501185 2466 dbSNP
rs976592755 2470 dbSNP
rs1395996660 2479 dbSNP
rs1018219572 2480 dbSNP
rs1468749206 2492 dbSNP
rs933393310 2498 dbSNP
rs964890485 2501 dbSNP
rs759254228 2509 dbSNP
rs1441964943 2511 dbSNP
rs561180505 2516 dbSNP
rs189513348 2519 dbSNP
rs1208724350 2535 dbSNP
rs1303802004 2537 dbSNP
rs955049154 2540 dbSNP
rs987728190 2545 dbSNP
rs368642081 2546 dbSNP
rs913670177 2562 dbSNP
rs942009951 2563 dbSNP
rs1037686910 2566 dbSNP
rs181847955 2567 dbSNP
rs946430743 2568 dbSNP
rs1311591277 2569 dbSNP
rs1043464486 2573 dbSNP
rs754131999 2574 dbSNP
rs1046552874 2576 dbSNP
rs926488074 2577 dbSNP
rs906708612 2581 dbSNP
rs937851429 2586 dbSNP
rs1001992482 2592 dbSNP
rs1255410982 2605 dbSNP
rs75466949 2610 dbSNP
rs957750670 2619 dbSNP
rs1011006771 2632 dbSNP
rs1406122418 2636 dbSNP
rs896362376 2649 dbSNP
rs1020601135 2658 dbSNP
rs528512856 2662 dbSNP
rs976623910 2666 dbSNP
rs186099323 2674 dbSNP
rs1333718568 2679 dbSNP
rs887773358 2689 dbSNP
rs1006742841 2700 dbSNP
rs1416118840 2702 dbSNP
rs565274879 2706 dbSNP
rs954001937 2707 dbSNP
rs1288845365 2713 dbSNP
rs1429045553 2715 dbSNP
rs1460150699 2718 dbSNP
rs1347382898 2722 dbSNP
rs750962719 2723 dbSNP
rs1160293846 2726 dbSNP
rs758414740 2747 dbSNP
rs780114103 2748 dbSNP
rs1167144894 2750 dbSNP
rs751706875 2751 dbSNP
rs965283427 2754 dbSNP
rs1475600756 2765 dbSNP
rs997606313 2766 dbSNP
rs866963327 2768 dbSNP
rs1185920749 2776 dbSNP
rs561721923 2782 dbSNP
rs1243568174 2789 dbSNP
rs1295921929 2795 dbSNP
rs1209141833 2798 dbSNP
rs1380941281 2803 dbSNP
rs942100212 2811 dbSNP
rs987780590 2818 dbSNP
rs913581214 2821 dbSNP
rs1234565275 2822 dbSNP
rs35394101 2826 dbSNP
rs967736218 2828 dbSNP
rs1295493927 2836 dbSNP
rs1213255922 2837 dbSNP
rs1364715260 2845 dbSNP
rs1289768674 2849 dbSNP
rs979625311 2853 dbSNP
rs1392516971 2868 dbSNP
rs1328235137 2872 dbSNP
rs1233556487 2876 dbSNP
rs1292236713 2877 dbSNP
rs919220996 2884 dbSNP
rs926358503 2885 dbSNP
rs747784382 2893 dbSNP
rs531074342 2894 dbSNP
rs906738398 2899 dbSNP
rs755168732 2906 dbSNP
rs917851628 2920 dbSNP
rs1215247362 2922 dbSNP
rs938158865 2923 dbSNP
rs1055275209 2924 dbSNP
rs1309739188 2924 dbSNP
rs35952844 2924 dbSNP
rs929235438 2926 dbSNP
rs1233995683 2939 dbSNP
rs371909974 2939 dbSNP
rs1369319773 2942 dbSNP
rs550781166 2944 dbSNP
rs190522560 2949 dbSNP
rs1396063533 2958 dbSNP
rs1486668870 2960 dbSNP
rs181622782 2961 dbSNP
rs1256999595 2964 dbSNP
rs1356180875 2967 dbSNP
rs1169203579 2978 dbSNP
rs546902732 2989 dbSNP
rs1474467881 2991 dbSNP
rs781514481 2992 dbSNP
rs1006216485 2993 dbSNP
rs1039539699 3001 dbSNP
rs2017027 3005 dbSNP
rs997659878 3008 dbSNP
rs1481357515 3009 dbSNP
rs1420904105 3010 dbSNP
rs1409861411 3013 dbSNP
rs1029568117 3020 dbSNP
rs1346353576 3026 dbSNP
rs1168902958 3027 dbSNP
rs1234454294 3028 dbSNP
rs538248946 3044 dbSNP
rs1030430444 3051 dbSNP
rs891952270 3052 dbSNP
rs1305188598 3054 dbSNP
rs769652434 3060 dbSNP
rs796551269 3061 dbSNP
rs777509742 3062 dbSNP
rs1433961435 3078 dbSNP
rs1373581476 3079 dbSNP
rs749238786 3086 dbSNP
rs1016736683 3096 dbSNP
rs1311899333 3098 dbSNP
rs558179011 3108 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048188. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_ptb_knockdown ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ugAC-GUCGGAACUGGAGgguc 5'
            || | ||||||:||||    
Target 5' ucUGCCUGCCUUGGCCUC---- 3'
20 - 37
2
miRNA  3' ugacgUCGGAACUGGAGgguc 5'
               | :| |||||||    
Target 5' ----aACUCCUGACCUCaggu 3'
1 - 17
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048188
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_ptb_knockdown
Location of target site ENST00000592521.1 | 3UTR | AACUCCUGACCUCAGGUGAUCUGCCUGCCUUGGCCUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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