pre-miRNA Information
pre-miRNA hsa-mir-4433a   
Genomic Coordinates chr2: 64340759 - 64340839
Description Homo sapiens miR-4433a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4433a-3p
Sequence 51| ACAGGAGUGGGGGUGGGACAU |71
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs751480515 9 dbSNP
rs557760377 15 dbSNP
rs1479580865 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CBFA2T3   
Synonyms ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4
Description CBFA2/RUNX1 translocation partner 3
Transcript NM_005187   
Other Transcripts NM_175931   
Expression
Putative miRNA Targets on CBFA2T3
3'UTR of CBFA2T3
(miRNA target sites are highlighted)
>CBFA2T3|NM_005187|3'UTR
   1 CCCCACTGGCCCCTGGCCTGCCGGACACAGCACCGTGCCAACCCCACCCAGCTCCAGGCCCACCGGATGCTGTGCCTGGC
  81 CTCCGATGCCTGGCCTGCCAGACACTGCGCCCCGCCTGACCTGGGGGAGCCGACCAATTAGTCACTGCTGCTACTGCCCC
 161 TCTCCGAAAGAAGACACAGAACCAACAAAACCGCATTCAGTGCACCTGCCTCAGCTACCTAATGATTCCGCGCGGAGACC
 241 TCCTGACAACGTCTCTTCAAGCATCCTCAGAAGCCTCGACTGAGCTTTAGACAGCAGAGCAGATGCCGCAGGCGCGGCGG
 321 CTCTGCCCACCTCTCTTTTCCTCTCTGTCTGTCTCTCCCCCTCTGTCTTCTCTATCCTCTCTCTCTCTATGACTATCACA
 401 CACTTTCTCTTCAATGAAAAAATCGAATTGGTGGCTTATATTTTCAGCAAAGAATTTTGGGGGGTTTTGTGTGTTGGCAA
 481 AAGAGCTACTCAGAAATGGACAAAGAAAACGGGGGGGTTCTCCCCCTCCTGATTAAAAAGGGAGAAAGAAAACTGCGATT
 561 TTATAGCTGGAGATCTGAACCCAGCTGTGCCCCTCCCCCAGGGGCGTGAGGCTGATCAGCGAAGACGGGAGGAAAGATTT
 641 CGATTTCTGACTCAAGATGCATTTTTGGTTTCAGATTTTTTTTTCCTGTAATGTTAAACTCTTTGGCTTTAAGTAAAAAT
 721 CCAAAAAGTTTTTTTAAAAAAGCAAAGGAAGCATACTTGTGAACTACCTTGCTAGCTAGCCAGCCAAGGATACCGGACAC
 801 ACCTCTGCTCCAAAGGAAATCCAAAAAAGCAAACACAAGAAATCAAAATCCAAAATTTGTTTGTCACTGCCAAAGTATTT
 881 TTTTCACTGTTTCACTTGCTCTTGGGTTTGTTTGGATGTGGGTCTTTTTCTCTTCTGTTCTGATTTTGTTTGTGGGTGTC
 961 GGGATATTTGGGTGCAGAGGGTTTGTGCCCAGTTAGAAGCGACTTTTGTTCTCTTCTGCGTAGGCGTTGGTGCGTCCGCC
1041 GCGTGTGCGTGGTCCGTGTGCCGTTGCTCCGGCCTGCGTCTCCATATGTGTAGGAAAGGACACGCCGTCTGTCCTCACGC
1121 CCCCTGTGACTTTTCATATTTCCGTTTTCCACTTGTGGAAAAAAAGTGCTAAAGTTTTCTTCCCAGAGAGAGCATAATTC
1201 CGAAACAAAACTGTGACAATCTTTTGGGTTGATTCTCGACTGCTTTTCGAGCATGCGGAGCCAGCAGGCCTCCCTGAAAC
1281 ACTGCTTCTCGGCCAGCCCGTCCTCCTCTACCTCTCTCCTCTCCGCGCCCTCCGACCTCTCTCGGCCCCCTCACCCCAGC
1361 TCCGACCTCTCTCAGCCCCATCGCCCCAACTCCAACCTCTCGGCCCCATCGCCCCACCGCAGCTACTCCCCTTTCTTCCA
1441 AACTTTTGCAGAAAAAACAAAAAAACTACAAACAAAAGCAGCCCTCTGCCTCCTCCCCAGGGAAGACCCTGACCGTGTAC
1521 ATAGCCCTGGTGCTCCTGCCCAGCCACCCCTCAGATGCGTTCGCCTCTGGCCCTGGGGTGTGTCTCGGTGACGTTTTCTA
1601 TCAGACGTGCTCCCTCCCATCCTCCAGCCCTGCCCACCCTCCCTCCACTCCTCTCAACTGCCTCAGCGATTTCAAGAAGG
1681 AAATAAAGGGATAAAGAAATTCATGCTTGCACCGAGTACAAGGACAGACAGCAGGCACGGCCCGCAGCCTGGCATCTGTG
1761 CGTGTGGCGTGGCCCGTGGCTTGGCATCTGTGTGCGTGGTGTGGCCCGTGGCCTGGCATCTGTGTGCGTGGCGTGGCCCG
1841 TGGCCTGGCATCTGTGTGTGTGGCGTGGCCCGTGGCCTGGCATCTGTGCGCGTGGCGTGGCCCGTGGCCTGGCATCTGTG
1921 TGCGTGGCTATCAGGAGTTCTAGGAACTCAGTGCAATACGGGAGTGACCCAGCTACTGAACCAGCCACGAACAGCCCGCC
2001 AGAGGCCTGAAGCTGAGCGTGTACGTTAATGTGAATGTATATAGTCTTTGCAGAGGTCCAAATGATATTCATGATGGTAA
2081 TAAACGAGATGTTTGCCAAATAAAAAACAGAAACCGCAGGA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' uacaGGGUGGGGGUGAGGAca 5'
              ||: ||:||||||||  
Target 5' ccacCCTCCCTCCACTCCTct 3'
1634 - 1654 149.00 -26.30
2
miRNA  3' uaCA-GGGUGGGG---GUGAGGACa 5'
            || | :| |||   ::|||||| 
Target 5' gtGTACATAGCCCTGGTGCTCCTGc 3'
1515 - 1539 135.00 -18.50
3
miRNA  3' uaCAGGGUGGGGGUGAGGACa 5'
            ||:|: ||||  |||||| 
Target 5' ggGTTCT-CCCC--CTCCTGa 3'
515 - 532 133.00 -22.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26748486 22 COSMIC
COSN26562179 90 COSMIC
COSN26599677 103 COSMIC
COSN31601150 148 COSMIC
COSN27296053 165 COSMIC
COSN26678165 182 COSMIC
COSN31513074 250 COSMIC
COSN31606648 335 COSMIC
COSN25659367 336 COSMIC
COSN23190591 431 COSMIC
COSN24520507 605 COSMIC
COSN31539515 722 COSMIC
COSN31566008 731 COSMIC
COSN8239685 794 COSMIC
COSN26604192 912 COSMIC
COSN30176183 925 COSMIC
COSN16114257 1037 COSMIC
COSN31522488 1211 COSMIC
COSN31520861 1248 COSMIC
COSN31522896 1292 COSMIC
COSN16115389 1298 COSMIC
COSN31555546 1324 COSMIC
COSN30540606 1326 COSMIC
COSN16582826 1327 COSMIC
COSN31538281 1403 COSMIC
COSN30105125 1419 COSMIC
COSN25438770 1636 COSMIC
COSN23426408 1647 COSMIC
COSN22360397 1702 COSMIC
COSN23971193 1781 COSMIC
COSN7158478 1840 COSMIC
COSN31517784 1852 COSMIC
COSN505925 1852 COSMIC
COSN30175743 1891 COSMIC
COSN28668267 1896 COSMIC
COSN31597360 1923 COSMIC
COSN22975287 1960 COSMIC
COSN26640316 1981 COSMIC
COSN26669529 2043 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1214085954 3 dbSNP
rs1246156021 5 dbSNP
rs1319175387 7 dbSNP
rs1022368986 9 dbSNP
rs1477435028 10 dbSNP
rs1171161057 13 dbSNP
rs1009199478 18 dbSNP
rs770377861 22 dbSNP
rs992047234 23 dbSNP
rs1358042868 28 dbSNP
rs1312314245 31 dbSNP
rs1454184016 34 dbSNP
rs200477699 35 dbSNP
rs1287996068 41 dbSNP
rs1428351993 42 dbSNP
rs1330428328 44 dbSNP
rs1265319839 47 dbSNP
rs1202297271 52 dbSNP
rs1483632258 64 dbSNP
rs1305762096 65 dbSNP
rs1031901267 68 dbSNP
rs997715110 71 dbSNP
rs901996114 72 dbSNP
rs771712049 81 dbSNP
rs1202023532 83 dbSNP
rs572701746 84 dbSNP
rs554558628 85 dbSNP
rs943441825 86 dbSNP
rs887834657 87 dbSNP
rs1268603084 94 dbSNP
rs1227679724 98 dbSNP
rs1267312074 99 dbSNP
rs1049534603 103 dbSNP
rs182442190 104 dbSNP
rs1022922841 108 dbSNP
rs1454279678 109 dbSNP
rs1167648129 113 dbSNP
rs1370971876 117 dbSNP
rs1463378251 122 dbSNP
rs575389833 123 dbSNP
rs710890 124 dbSNP
rs1007059859 131 dbSNP
rs557128390 132 dbSNP
rs1334216499 137 dbSNP
rs1327773326 138 dbSNP
rs992023359 141 dbSNP
rs1434464855 145 dbSNP
rs1458538668 147 dbSNP
rs1391279633 148 dbSNP
rs889925221 153 dbSNP
rs1309449169 154 dbSNP
rs939210962 155 dbSNP
rs1457154808 159 dbSNP
rs1362516120 160 dbSNP
rs926455632 162 dbSNP
rs1190260341 163 dbSNP
rs1274348418 165 dbSNP
rs980521436 165 dbSNP
rs146886666 172 dbSNP
rs1259283105 177 dbSNP
rs1429963230 179 dbSNP
rs1181975371 186 dbSNP
rs1416914304 191 dbSNP
rs571514808 192 dbSNP
rs552947693 193 dbSNP
rs534928719 197 dbSNP
rs897193385 198 dbSNP
rs988228480 201 dbSNP
rs1287217485 203 dbSNP
rs956387431 213 dbSNP
rs941481951 214 dbSNP
rs1383002511 225 dbSNP
rs1031953584 227 dbSNP
rs143578732 230 dbSNP
rs1235510984 231 dbSNP
rs1274404502 232 dbSNP
rs1207829544 233 dbSNP
rs902048388 234 dbSNP
rs556811635 236 dbSNP
rs1267079260 239 dbSNP
rs1245439774 240 dbSNP
rs1256367666 243 dbSNP
rs1320574956 245 dbSNP
rs1007687029 248 dbSNP
rs1418250642 249 dbSNP
rs1418450902 250 dbSNP
rs887877821 251 dbSNP
rs1347043272 253 dbSNP
rs1436787294 258 dbSNP
rs916392806 262 dbSNP
rs1365533693 263 dbSNP
rs765743904 265 dbSNP
rs1294323766 266 dbSNP
rs929325692 267 dbSNP
rs897812530 273 dbSNP
rs1165495015 275 dbSNP
rs1458926510 277 dbSNP
rs939235078 278 dbSNP
rs762235446 279 dbSNP
rs1239125198 282 dbSNP
rs923635152 288 dbSNP
rs939261689 289 dbSNP
rs148706921 292 dbSNP
rs1022059712 302 dbSNP
rs1248841974 303 dbSNP
rs985154425 305 dbSNP
rs954236418 306 dbSNP
rs981014661 307 dbSNP
rs568992205 308 dbSNP
rs1393303965 309 dbSNP
rs61017022 310 dbSNP
rs1313654444 311 dbSNP
rs987891423 313 dbSNP
rs1005559030 314 dbSNP
rs1300484532 315 dbSNP
rs888416309 318 dbSNP
rs532562914 319 dbSNP
rs1029327341 323 dbSNP
rs948763916 325 dbSNP
rs565138586 332 dbSNP
rs1236040985 339 dbSNP
rs895008338 340 dbSNP
rs540529036 341 dbSNP
rs976381878 343 dbSNP
rs1234569385 345 dbSNP
rs570445962 347 dbSNP
rs903506948 347 dbSNP
rs1251233634 351 dbSNP
rs1455593335 352 dbSNP
rs747961368 355 dbSNP
rs1017848324 358 dbSNP
rs1342292487 358 dbSNP
rs914875749 359 dbSNP
rs528797409 360 dbSNP
rs113425499 362 dbSNP
rs1440832604 362 dbSNP
rs976890934 364 dbSNP
rs761453963 365 dbSNP
rs1015858882 367 dbSNP
rs1006192454 372 dbSNP
rs751476505 373 dbSNP
rs1212396292 374 dbSNP
rs1274884729 376 dbSNP
rs888478358 377 dbSNP
rs772361951 379 dbSNP
rs867482622 381 dbSNP
rs1022958563 385 dbSNP
rs1013037842 389 dbSNP
rs10653475 389 dbSNP
rs1241788010 389 dbSNP
rs1469926064 389 dbSNP
rs533644510 389 dbSNP
rs993594022 391 dbSNP
rs191015356 393 dbSNP
rs1057198200 395 dbSNP
rs939172988 396 dbSNP
rs1431635832 398 dbSNP
rs902322491 399 dbSNP
rs1042332567 403 dbSNP
rs897864466 407 dbSNP
rs1056397137 409 dbSNP
rs1167538780 414 dbSNP
rs74035882 423 dbSNP
rs543066326 424 dbSNP
rs774528713 425 dbSNP
rs1432409317 428 dbSNP
rs1445283955 435 dbSNP
rs1218289346 459 dbSNP
rs1242899027 470 dbSNP
rs1266637984 471 dbSNP
rs144235953 478 dbSNP
rs1475838624 480 dbSNP
rs1483064206 484 dbSNP
rs572438201 487 dbSNP
rs1273370545 488 dbSNP
rs1158430039 490 dbSNP
rs1193685093 491 dbSNP
rs1383636096 491 dbSNP
rs915078597 497 dbSNP
rs577873893 502 dbSNP
rs908684650 505 dbSNP
rs566190087 510 dbSNP
rs935078639 511 dbSNP
rs553151073 513 dbSNP
rs1360729793 517 dbSNP
rs1023009230 518 dbSNP
rs548022138 518 dbSNP
rs922307490 520 dbSNP
rs1234367637 522 dbSNP
rs1357081415 523 dbSNP
rs976434186 524 dbSNP
rs149581413 525 dbSNP
rs1348720276 527 dbSNP
rs1412293720 540 dbSNP
rs1371244882 544 dbSNP
rs564247686 546 dbSNP
rs1485481183 550 dbSNP
rs1408409288 553 dbSNP
rs139316161 557 dbSNP
rs1173409260 576 dbSNP
rs1486169929 577 dbSNP
rs147189487 580 dbSNP
rs952351935 581 dbSNP
rs530908753 589 dbSNP
rs749073786 592 dbSNP
rs1362562522 593 dbSNP
rs1468189500 596 dbSNP
rs994036074 597 dbSNP
rs1426958857 605 dbSNP
rs565318012 606 dbSNP
rs1377111299 608 dbSNP
rs999328938 609 dbSNP
rs143660068 620 dbSNP
rs1035042574 621 dbSNP
rs1310119013 622 dbSNP
rs1231792308 623 dbSNP
rs893727284 626 dbSNP
rs1178983430 627 dbSNP
rs1003511245 629 dbSNP
rs1278801256 633 dbSNP
rs905186529 642 dbSNP
rs1195558474 643 dbSNP
rs12919596 647 dbSNP
rs1249094159 650 dbSNP
rs1040795244 652 dbSNP
rs1045428142 654 dbSNP
rs1238251398 656 dbSNP
rs939753097 656 dbSNP
rs1453259000 659 dbSNP
rs1171444988 660 dbSNP
rs1010818886 661 dbSNP
rs759011880 673 dbSNP
rs1466405318 675 dbSNP
rs553984926 676 dbSNP
rs550612308 680 dbSNP
rs1052278744 684 dbSNP
rs1411596343 685 dbSNP
rs984691524 685 dbSNP
rs935128966 687 dbSNP
rs1438795685 690 dbSNP
rs1305945809 695 dbSNP
rs1331875543 697 dbSNP
rs1279514225 699 dbSNP
rs1250003803 702 dbSNP
rs1440064430 705 dbSNP
rs1342349107 707 dbSNP
rs1199832450 710 dbSNP
rs769547749 713 dbSNP
rs138203251 715 dbSNP
rs1469535354 724 dbSNP
rs1268784158 725 dbSNP
rs942365253 729 dbSNP
rs747721764 730 dbSNP
rs1403594147 732 dbSNP
rs1171380236 736 dbSNP
rs1393600200 736 dbSNP
rs58307404 736 dbSNP
rs986821656 745 dbSNP
rs1457591582 746 dbSNP
rs952337049 748 dbSNP
rs920802653 754 dbSNP
rs991709793 756 dbSNP
rs1381863943 774 dbSNP
rs199897400 777 dbSNP
rs1293623877 780 dbSNP
rs972221249 781 dbSNP
rs188274409 794 dbSNP
rs528714612 795 dbSNP
rs982160602 798 dbSNP
rs998986160 802 dbSNP
rs1473458643 803 dbSNP
rs562666679 807 dbSNP
rs1237602482 809 dbSNP
rs1216055244 811 dbSNP
rs561617226 813 dbSNP
rs1266706030 826 dbSNP
rs969830508 835 dbSNP
rs1459736607 836 dbSNP
rs1241664412 838 dbSNP
rs1023646429 839 dbSNP
rs1478703238 842 dbSNP
rs1210921526 850 dbSNP
rs1011288335 852 dbSNP
rs1416833210 858 dbSNP
rs967865942 861 dbSNP
rs1369137251 865 dbSNP
rs143948959 865 dbSNP
rs183319129 873 dbSNP
rs549459444 875 dbSNP
rs1011164266 880 dbSNP
rs191927600 883 dbSNP
rs1312689460 885 dbSNP
rs1358545464 885 dbSNP
rs893742603 888 dbSNP
rs1031307426 899 dbSNP
rs999388804 901 dbSNP
rs1235692384 904 dbSNP
rs1314052163 912 dbSNP
rs1321867471 914 dbSNP
rs1452160582 916 dbSNP
rs371826638 930 dbSNP
rs1258636176 934 dbSNP
rs780516730 942 dbSNP
rs879941372 947 dbSNP
rs1040855145 949 dbSNP
rs879602567 949 dbSNP
rs1256739041 960 dbSNP
rs754486873 987 dbSNP
rs113011555 1000 dbSNP
rs1048059609 1001 dbSNP
rs751295314 1002 dbSNP
rs920867375 1006 dbSNP
rs1407075645 1016 dbSNP
rs779847304 1019 dbSNP
rs532269471 1020 dbSNP
rs940903641 1025 dbSNP
rs147020286 1026 dbSNP
rs991771698 1027 dbSNP
rs938909009 1030 dbSNP
rs1355139217 1031 dbSNP
rs1279140194 1033 dbSNP
rs1391591066 1034 dbSNP
rs1211951176 1037 dbSNP
rs928661305 1040 dbSNP
rs982213192 1041 dbSNP
rs1175345741 1043 dbSNP
rs977830555 1043 dbSNP
rs577837257 1047 dbSNP
rs781564000 1048 dbSNP
rs1393468544 1051 dbSNP
rs141356909 1054 dbSNP
rs754379330 1055 dbSNP
rs1354269435 1056 dbSNP
rs990228333 1057 dbSNP
rs541201184 1062 dbSNP
rs958267299 1063 dbSNP
rs1028099137 1065 dbSNP
rs1446875638 1067 dbSNP
rs1302303522 1068 dbSNP
rs573793002 1070 dbSNP
rs148180483 1071 dbSNP
rs1357372785 1073 dbSNP
rs1202426652 1074 dbSNP
rs1300020000 1076 dbSNP
rs901094170 1077 dbSNP
rs1458304509 1078 dbSNP
rs1361001248 1085 dbSNP
rs1213120771 1086 dbSNP
rs1251166734 1087 dbSNP
rs1019485495 1090 dbSNP
rs536949155 1103 dbSNP
rs1019466427 1106 dbSNP
rs74321292 1107 dbSNP
rs889559758 1116 dbSNP
rs1048588474 1118 dbSNP
rs185990038 1119 dbSNP
rs1422146692 1121 dbSNP
rs1324675207 1126 dbSNP
rs1347546936 1135 dbSNP
rs931039085 1143 dbSNP
rs1275063166 1144 dbSNP
rs896794056 1144 dbSNP
rs1212555209 1158 dbSNP
rs1280070733 1159 dbSNP
rs1318542800 1161 dbSNP
rs1212945644 1166 dbSNP
rs1271353074 1167 dbSNP
rs1453338535 1171 dbSNP
rs1168825782 1172 dbSNP
rs1222656760 1182 dbSNP
rs1427626093 1186 dbSNP
rs1485118070 1189 dbSNP
rs1036608382 1190 dbSNP
rs940956489 1191 dbSNP
rs938795316 1193 dbSNP
rs928889731 1195 dbSNP
rs977672954 1199 dbSNP
rs1185091468 1202 dbSNP
rs946058360 1212 dbSNP
rs914561639 1215 dbSNP
rs1479226264 1217 dbSNP
rs1299840949 1219 dbSNP
rs1270143277 1224 dbSNP
rs1232615425 1227 dbSNP
rs1282340514 1228 dbSNP
rs1358642503 1235 dbSNP
rs538719005 1235 dbSNP
rs1222413949 1237 dbSNP
rs928182754 1238 dbSNP
rs1489875470 1243 dbSNP
rs982265663 1248 dbSNP
rs990667639 1249 dbSNP
rs1485544035 1251 dbSNP
rs1205443928 1256 dbSNP
rs1239693460 1257 dbSNP
rs571693270 1261 dbSNP
rs369651523 1264 dbSNP
rs989953255 1265 dbSNP
rs1220703161 1267 dbSNP
rs143038019 1269 dbSNP
rs1160021244 1278 dbSNP
rs1360990496 1285 dbSNP
rs1413932667 1290 dbSNP
rs567767906 1291 dbSNP
rs978051752 1299 dbSNP
rs761039045 1300 dbSNP
rs1279041319 1307 dbSNP
rs975219138 1309 dbSNP
rs965148378 1310 dbSNP
rs1019960876 1311 dbSNP
rs1019517096 1312 dbSNP
rs886796678 1314 dbSNP
rs1006735865 1323 dbSNP
rs1491501761 1323 dbSNP
rs149050049 1324 dbSNP
rs1491580015 1324 dbSNP
rs531249691 1325 dbSNP
rs1180192608 1326 dbSNP
rs995658197 1327 dbSNP
rs896878051 1333 dbSNP
rs894234771 1334 dbSNP
rs1433919059 1335 dbSNP
rs1055520429 1339 dbSNP
rs1003055828 1341 dbSNP
rs376657173 1344 dbSNP
rs1199320415 1346 dbSNP
rs1374856440 1351 dbSNP
rs372302274 1354 dbSNP
rs551377458 1356 dbSNP
rs1310327131 1358 dbSNP
rs907345980 1361 dbSNP
rs1042386058 1362 dbSNP
rs532994895 1363 dbSNP
rs1249771793 1364 dbSNP
rs559387461 1365 dbSNP
rs1256706485 1367 dbSNP
rs1456095145 1374 dbSNP
rs879266279 1375 dbSNP
rs1238199064 1376 dbSNP
rs1262346745 1376 dbSNP
rs1221582081 1380 dbSNP
rs13338375 1382 dbSNP
rs1379215202 1383 dbSNP
rs1307656596 1385 dbSNP
rs1054383140 1386 dbSNP
rs1397998248 1388 dbSNP
rs1467076750 1389 dbSNP
rs1332165754 1392 dbSNP
rs1393740625 1395 dbSNP
rs931944637 1396 dbSNP
rs948271062 1397 dbSNP
rs922025859 1400 dbSNP
rs753227675 1401 dbSNP
rs546172186 1402 dbSNP
rs1304207877 1403 dbSNP
rs1320651184 1403 dbSNP
rs1448384520 1404 dbSNP
rs1407255382 1410 dbSNP
rs1176218521 1417 dbSNP
rs1268988179 1417 dbSNP
rs573731377 1419 dbSNP
rs1053908651 1422 dbSNP
rs1421159352 1423 dbSNP
rs1468593337 1426 dbSNP
rs936757816 1428 dbSNP
rs1417316036 1433 dbSNP
rs561742056 1439 dbSNP
rs1456451066 1441 dbSNP
rs1295542763 1448 dbSNP
rs983140463 1449 dbSNP
rs1381811882 1458 dbSNP
rs1414787029 1458 dbSNP
rs1160478648 1461 dbSNP
rs1342709429 1463 dbSNP
rs1418522391 1464 dbSNP
rs1027280384 1466 dbSNP
rs764860734 1466 dbSNP
rs951329162 1466 dbSNP
rs1241958226 1470 dbSNP
rs995182343 1478 dbSNP
rs923981923 1482 dbSNP
rs1183815453 1483 dbSNP
rs1215357382 1485 dbSNP
rs978105550 1488 dbSNP
rs1034119038 1489 dbSNP
rs543278563 1492 dbSNP
rs1002605649 1498 dbSNP
rs1255346895 1499 dbSNP
rs1422183586 1503 dbSNP
rs146463996 1509 dbSNP
rs79402227 1514 dbSNP
rs759659453 1515 dbSNP
rs1157071326 1517 dbSNP
rs538638049 1518 dbSNP
rs539077525 1524 dbSNP
rs1010943116 1525 dbSNP
rs560559057 1526 dbSNP
rs1054602088 1533 dbSNP
rs771087416 1538 dbSNP
rs1283431824 1539 dbSNP
rs961131786 1546 dbSNP
rs1217034667 1549 dbSNP
rs921911368 1552 dbSNP
rs1482252057 1558 dbSNP
rs1183455372 1559 dbSNP
rs145772551 1562 dbSNP
rs140686400 1563 dbSNP
rs906860913 1572 dbSNP
rs1046684672 1575 dbSNP
rs1382386322 1583 dbSNP
rs556020545 1586 dbSNP
rs951256882 1587 dbSNP
rs181804276 1592 dbSNP
rs1303919436 1593 dbSNP
rs146850612 1593 dbSNP
rs1054364189 1601 dbSNP
rs544141892 1604 dbSNP
rs1453761983 1606 dbSNP
rs1034003881 1607 dbSNP
rs1378680009 1613 dbSNP
rs1240365563 1621 dbSNP
rs1300334300 1622 dbSNP
rs1167066333 1636 dbSNP
rs1212238731 1640 dbSNP
rs1445348541 1647 dbSNP
rs1384767074 1648 dbSNP
rs1181990973 1654 dbSNP
rs1196859410 1656 dbSNP
rs1003071318 1661 dbSNP
rs1240059326 1661 dbSNP
rs1466076257 1663 dbSNP
rs191067101 1667 dbSNP
rs1020414796 1668 dbSNP
rs1010411750 1672 dbSNP
rs1464477155 1684 dbSNP
rs924032563 1696 dbSNP
rs1042480882 1700 dbSNP
rs944041275 1701 dbSNP
rs1442499025 1702 dbSNP
rs556447363 1712 dbSNP
rs1365281935 1713 dbSNP
rs532936194 1714 dbSNP
rs932565763 1717 dbSNP
rs1033240441 1720 dbSNP
rs114576648 1722 dbSNP
rs974328803 1725 dbSNP
rs374986905 1733 dbSNP
rs1246026366 1735 dbSNP
rs1040351433 1736 dbSNP
rs184822682 1738 dbSNP
rs561516446 1739 dbSNP
rs1423303469 1742 dbSNP
rs971073494 1743 dbSNP
rs1425218234 1744 dbSNP
rs1410012003 1746 dbSNP
rs1163699096 1748 dbSNP
rs1296795051 1749 dbSNP
rs1438124166 1751 dbSNP
rs1023060292 1752 dbSNP
rs1303539400 1755 dbSNP
rs1339536239 1757 dbSNP
rs543191265 1761 dbSNP
rs929845408 1761 dbSNP
rs531436418 1762 dbSNP
rs1032564322 1763 dbSNP
rs1001062001 1768 dbSNP
rs867379653 1769 dbSNP
rs1262931541 1772 dbSNP
rs902664974 1775 dbSNP
rs149839258 1776 dbSNP
rs140009640 1778 dbSNP
rs879164049 1781 dbSNP
rs1406753606 1783 dbSNP
rs201508192 1783 dbSNP
rs1163815791 1784 dbSNP
rs1192136081 1793 dbSNP
rs988940571 1793 dbSNP
rs185051153 1795 dbSNP
rs957556195 1795 dbSNP
rs372044451 1796 dbSNP
rs932640960 1798 dbSNP
rs1269298270 1800 dbSNP
rs1247061961 1802 dbSNP
rs919866443 1803 dbSNP
rs1285571421 1807 dbSNP
rs900767324 1808 dbSNP
rs974001199 1812 dbSNP
rs1223153531 1813 dbSNP
rs939899442 1813 dbSNP
rs1442355234 1817 dbSNP
rs1490040703 1825 dbSNP
rs541488822 1827 dbSNP
rs574031699 1828 dbSNP
rs377676563 1832 dbSNP
rs537635388 1833 dbSNP
rs1043422687 1838 dbSNP
rs991573559 1839 dbSNP
rs957047657 1840 dbSNP
rs1361033812 1844 dbSNP
rs1453447914 1845 dbSNP
rs1285734381 1847 dbSNP
rs1047832110 1848 dbSNP
rs558142231 1857 dbSNP
rs1302050071 1859 dbSNP
rs533536818 1859 dbSNP
rs1280524386 1860 dbSNP
rs1344926638 1861 dbSNP
rs1199316271 1863 dbSNP
rs180952624 1863 dbSNP
rs200368454 1863 dbSNP
rs898367220 1863 dbSNP
rs1033030742 1864 dbSNP
rs368079462 1865 dbSNP
rs1038208703 1869 dbSNP
rs937117836 1869 dbSNP
rs1001113920 1871 dbSNP
rs902715862 1872 dbSNP
rs1021137718 1877 dbSNP
rs565637989 1879 dbSNP
rs1427211745 1880 dbSNP
rs1460228866 1880 dbSNP
rs547100577 1882 dbSNP
rs1200060752 1886 dbSNP
rs957108481 1887 dbSNP
rs1032685367 1888 dbSNP
rs189395916 1889 dbSNP
rs566280224 1890 dbSNP
rs1276922780 1891 dbSNP
rs746503646 1891 dbSNP
rs528911985 1892 dbSNP
rs567800970 1896 dbSNP
rs939949973 1897 dbSNP
rs1193773507 1901 dbSNP
rs950777661 1903 dbSNP
rs908426030 1904 dbSNP
rs1169860840 1905 dbSNP
rs1045557539 1909 dbSNP
rs1421664283 1912 dbSNP
rs1467223386 1912 dbSNP
rs1026726950 1920 dbSNP
rs1390315248 1921 dbSNP
rs994963130 1922 dbSNP
rs1363609230 1923 dbSNP
rs1281961321 1927 dbSNP
rs1399991168 1929 dbSNP
rs949884764 1937 dbSNP
rs1315569011 1939 dbSNP
rs915672766 1947 dbSNP
rs1228943168 1950 dbSNP
rs991234606 1956 dbSNP
rs957302887 1957 dbSNP
rs779865796 1959 dbSNP
rs977049538 1960 dbSNP
rs1430188609 1961 dbSNP
rs966970951 1964 dbSNP
rs905671478 1979 dbSNP
rs1032095396 1980 dbSNP
rs1367896167 1983 dbSNP
rs1021189993 1988 dbSNP
rs1008429629 1989 dbSNP
rs955548936 1997 dbSNP
rs1045670823 1998 dbSNP
rs1296940087 2006 dbSNP
rs949992720 2009 dbSNP
rs1295691805 2013 dbSNP
rs549512035 2018 dbSNP
rs1231878668 2019 dbSNP
rs758083571 2024 dbSNP
rs531356829 2025 dbSNP
rs1430108778 2029 dbSNP
rs778050040 2030 dbSNP
rs1243394734 2032 dbSNP
rs1053194633 2046 dbSNP
rs1204662829 2048 dbSNP
rs1255623094 2051 dbSNP
rs1422127845 2053 dbSNP
rs1461146533 2056 dbSNP
rs898542630 2060 dbSNP
rs1261755928 2064 dbSNP
rs1226038206 2068 dbSNP
rs1038337841 2069 dbSNP
rs184984601 2071 dbSNP
rs1362783920 2074 dbSNP
rs925719749 2080 dbSNP
rs974442339 2081 dbSNP
rs1237126081 2084 dbSNP
rs546042887 2085 dbSNP
rs1316476220 2086 dbSNP
rs527610709 2095 dbSNP
rs181523578 2096 dbSNP
rs151028067 2103 dbSNP
rs1306821929 2108 dbSNP
rs987776466 2112 dbSNP
rs1170633182 2115 dbSNP
rs1337676899 2116 dbSNP
rs1482346008 2117 dbSNP
rs142832191 2119 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048188. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_ptb_knockdown ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' uacaggguggggguGAGGACa 5'
                        |||||| 
Target 5' uuccgcgcggagacCUCCUGa 3'
4 - 24
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048188
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_ptb_knockdown
Location of target site ENST00000327483.5 | 3UTR | UGAUUCCGCGCGGAGACCUCCUGACAACGUCUCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
256 hsa-miR-4433a-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT088097 SEPT2 septin 2 2 2
MIRT143134 MGRN1 mahogunin ring finger 1 2 2
MIRT153912 NCOA3 nuclear receptor coactivator 3 2 2
MIRT154894 GNAS GNAS complex locus 2 4
MIRT200996 ZNF805 zinc finger protein 805 2 2
MIRT215729 C5ORF51 chromosome 5 open reading frame 51 2 10
MIRT235593 POFUT1 protein O-fucosyltransferase 1 2 2
MIRT263250 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT317951 CDC5L cell division cycle 5 like 2 4
MIRT325572 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT354739 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 2 2
MIRT444552 UBE2D3 ubiquitin conjugating enzyme E2 D3 2 4
MIRT446978 SUSD5 sushi domain containing 5 2 2
MIRT451036 ZNF610 zinc finger protein 610 2 2
MIRT451596 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT452025 NLRP6 NLR family pyrin domain containing 6 2 2
MIRT452594 CA6 carbonic anhydrase 6 2 2
MIRT452768 TCEA3 transcription elongation factor A3 2 4
MIRT452959 ZNF844 zinc finger protein 844 2 2
MIRT453191 ACSF2 acyl-CoA synthetase family member 2 2 2
MIRT453382 RHD Rh blood group D antigen 2 2
MIRT453685 CEBPD CCAAT/enhancer binding protein delta 2 2
MIRT455272 DDX39B DExD-box helicase 39B 2 8
MIRT455346 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT456494 SERAC1 serine active site containing 1 2 2
MIRT456585 NID1 nidogen 1 2 2
MIRT456888 DDA1 DET1 and DDB1 associated 1 2 2
MIRT457123 APOLD1 apolipoprotein L domain containing 1 2 2
MIRT457852 ZNF324B zinc finger protein 324B 2 2
MIRT457987 APAF1 apoptotic peptidase activating factor 1 2 2
MIRT459278 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 2
MIRT459625 SLC25A33 solute carrier family 25 member 33 2 2
MIRT459715 SGK494 uncharacterized serine/threonine-protein kinase SgK494 2 2
MIRT460057 RPL22L1 ribosomal protein L22 like 1 2 2
MIRT460182 UNK unkempt family zinc finger 2 6
MIRT460288 PDE11A phosphodiesterase 11A 2 2
MIRT460841 EGF epidermal growth factor 2 4
MIRT460860 TBC1D19 TBC1 domain family member 19 2 2
MIRT461519 EMC7 ER membrane protein complex subunit 7 2 2
MIRT461729 SLC27A1 solute carrier family 27 member 1 2 4
MIRT461821 SNAP23 synaptosome associated protein 23 2 2
MIRT462066 CCDC77 coiled-coil domain containing 77 2 4
MIRT462084 MSANTD2 Myb/SANT DNA binding domain containing 2 2 2
MIRT462508 MTFMT mitochondrial methionyl-tRNA formyltransferase 2 10
MIRT464239 VCP valosin containing protein 2 2
MIRT465316 TRAF5 TNF receptor associated factor 5 2 2
MIRT466549 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT467128 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 8
MIRT468091 SHCBP1 SHC binding and spindle associated 1 2 2
MIRT469630 RAD21 RAD21 cohesin complex component 2 6
MIRT471097 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT472704 MYBL1 MYB proto-oncogene like 1 2 2
MIRT472830 MTMR10 myotubularin related protein 10 2 2
MIRT472872 MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 2 2
MIRT472895 MTDH metadherin 2 2
MIRT473728 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT473859 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT474047 LONRF1 LON peptidase N-terminal domain and ring finger 1 2 2
MIRT474297 LAMC1 laminin subunit gamma 1 2 2
MIRT474658 KLF13 Kruppel like factor 13 2 2
MIRT475234 IKZF3 IKAROS family zinc finger 3 2 2
MIRT475500 HSP90B1 heat shock protein 90 beta family member 1 2 2
MIRT475742 HERPUD1 homocysteine inducible ER protein with ubiquitin like domain 1 2 4
MIRT475793 HDGF heparin binding growth factor 2 2
MIRT477254 ERGIC2 ERGIC and golgi 2 2 2
MIRT478228 DDX52 DExD-box helicase 52 2 2
MIRT478393 DCTN5 dynactin subunit 5 2 2
MIRT478754 CS citrate synthase 2 2
MIRT478827 CRKL CRK like proto-oncogene, adaptor protein 2 4
MIRT480234 C9orf41 carnosine N-methyltransferase 1 2 2
MIRT480597 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT484121 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT484689 PACSIN1 protein kinase C and casein kinase substrate in neurons 1 2 2
MIRT486331 C11orf54 chromosome 11 open reading frame 54 2 4
MIRT488599 FAM3C family with sequence similarity 3 member C 2 8
MIRT488833 MRRF mitochondrial ribosome recycling factor 2 2
MIRT492523 RAB15 RAB15, member RAS oncogene family 2 4
MIRT493632 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT500026 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501075 SMAD7 SMAD family member 7 2 8
MIRT503094 BTG2 BTG anti-proliferation factor 2 2 4
MIRT503336 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT505465 STMN1 stathmin 1 2 4
MIRT505726 SERTAD3 SERTA domain containing 3 2 4
MIRT509333 MS4A4A membrane spanning 4-domains A4A 2 2
MIRT509978 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 4
MIRT513068 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT513446 EMP1 epithelial membrane protein 1 2 6
MIRT513736 PSD3 pleckstrin and Sec7 domain containing 3 2 4
MIRT513996 CENPQ centromere protein Q 2 4
MIRT516538 MIXL1 Mix paired-like homeobox 2 2
MIRT517606 SAV1 salvador family WW domain containing protein 1 2 2
MIRT518064 CEP89 centrosomal protein 89 2 2
MIRT518119 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT518325 WDR92 WD repeat domain 92 2 2
MIRT519048 ABCB11 ATP binding cassette subfamily B member 11 2 2
MIRT520972 SPPL2A signal peptide peptidase like 2A 2 4
MIRT521359 RPL35A ribosomal protein L35a 2 2
MIRT523359 GTF3C6 general transcription factor IIIC subunit 6 2 2
MIRT523801 FAM63A MINDY lysine 48 deubiquitinase 1 2 2
MIRT524622 C7orf73 short transmembrane mitochondrial protein 1 2 2
MIRT525550 PHB2 prohibitin 2 2 4
MIRT529709 ZBTB49 zinc finger and BTB domain containing 49 2 2
MIRT531605 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT532387 UMPS uridine monophosphate synthetase 2 2
MIRT534468 SCD stearoyl-CoA desaturase 2 4
MIRT537546 ETNK1 ethanolamine kinase 1 2 2
MIRT541619 C11orf31 selenoprotein H 2 2
MIRT548380 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT549523 HDDC2 HD domain containing 2 2 2
MIRT549774 SOD2 superoxide dismutase 2 2 2
MIRT550578 SLC2A5 solute carrier family 2 member 5 2 2
MIRT551498 CENPN centromere protein N 2 4
MIRT552301 ITGA3 integrin subunit alpha 3 2 2
MIRT555400 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT556399 LUC7L LUC7 like 2 2
MIRT557047 HOXB3 homeobox B3 2 2
MIRT558072 ERO1L endoplasmic reticulum oxidoreductase 1 alpha 1 2
MIRT559659 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT561239 ZNF354B zinc finger protein 354B 2 2
MIRT566899 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT568786 FAM120B family with sequence similarity 120B 2 2
MIRT574014 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT574885 Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 2 2
MIRT575243 Serping1 serine (or cysteine) peptidase inhibitor, clade G, member 1 2 2
MIRT576194 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576309 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576484 Lhx4 LIM homeobox protein 4 2 3
MIRT576646 Mill2 MHC I like leukocyte 2 1 1
MIRT576708 Kras Kirsten rat sarcoma viral oncogene homolog 2 2
MIRT576855 Socs6 suppressor of cytokine signaling 6 2 2
MIRT576950 Aldoa aldolase A, fructose-bisphosphate 2 2
MIRT617133 ZNF556 zinc finger protein 556 2 4
MIRT617928 ZNF783 zinc finger family member 783 2 2
MIRT618981 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT621100 SIX3 SIX homeobox 3 2 2
MIRT624537 BROX BRO1 domain and CAAX motif containing 2 2
MIRT625663 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT627059 DCTN6 dynactin subunit 6 2 2
MIRT628319 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT630859 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT632295 TMEM65 transmembrane protein 65 2 2
MIRT634115 ZNF207 zinc finger protein 207 2 2
MIRT634736 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT635655 NDST3 N-deacetylase and N-sulfotransferase 3 2 2
MIRT635772 PDCL3 phosducin like 3 2 2
MIRT635911 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT636365 OGFRL1 opioid growth factor receptor like 1 2 4
MIRT637251 GLRX2 glutaredoxin 2 2 2
MIRT638705 FZD4 frizzled class receptor 4 2 2
MIRT639640 PREX2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 2 2
MIRT639676 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT642267 SMIM17 small integral membrane protein 17 2 2
MIRT642372 ZNF581 zinc finger protein 581 2 2
MIRT643545 SLC25A17 solute carrier family 25 member 17 2 2
MIRT647994 PDE12 phosphodiesterase 12 2 2
MIRT649094 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT650993 ZNF770 zinc finger protein 770 2 2
MIRT651956 UBE2N ubiquitin conjugating enzyme E2 N 2 2
MIRT652977 SUN2 Sad1 and UNC84 domain containing 2 2 2
MIRT654389 RBM12B RNA binding motif protein 12B 2 2
MIRT655637 OLFML2A olfactomedin like 2A 2 2
MIRT655729 NRXN3 neurexin 3 2 2
MIRT658171 FCHSD1 FCH and double SH3 domains 1 2 2
MIRT660937 ACOX1 acyl-CoA oxidase 1 2 2
MIRT662112 CERKL ceramide kinase like 2 2
MIRT662302 MPV17L MPV17 mitochondrial inner membrane protein like 2 2
MIRT662993 TMEM59 transmembrane protein 59 2 2
MIRT663071 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT663704 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663864 MUC20 mucin 20, cell surface associated 2 2
MIRT665185 HAUS5 HAUS augmin like complex subunit 5 2 4
MIRT665402 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT665688 TNPO3 transportin 3 2 2
MIRT665795 TMEM170A transmembrane protein 170A 2 2
MIRT665847 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT666999 PDPN podoplanin 2 2
MIRT667598 LIPC lipase C, hepatic type 2 2
MIRT668576 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT670960 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT671187 ZNF891 zinc finger protein 891 2 2
MIRT671739 ZNF451 zinc finger protein 451 2 2
MIRT672745 ZNF585B zinc finger protein 585B 2 4
MIRT673446 ZNF583 zinc finger protein 583 2 2
MIRT679843 GPR75 G protein-coupled receptor 75 2 2
MIRT680556 ZNF584 zinc finger protein 584 2 2
MIRT680661 C1orf210 chromosome 1 open reading frame 210 2 2
MIRT681285 RFC2 replication factor C subunit 2 2 2
MIRT683264 ZNF329 zinc finger protein 329 2 2
MIRT684519 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT685065 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685157 DTWD2 DTW domain containing 2 2 2
MIRT685168 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT685470 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT686001 NEK4 NIMA related kinase 4 2 2
MIRT687027 RNF24 ring finger protein 24 2 2
MIRT687543 MOB1B MOB kinase activator 1B 2 2
MIRT687592 MANEAL mannosidase endo-alpha like 2 2
MIRT687753 KIAA1328 KIAA1328 2 2
MIRT688050 GLUL glutamate-ammonia ligase 2 2
MIRT688374 ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 2 2
MIRT688802 CBFA2T3 CBFA2/RUNX1 translocation partner 3 2 2
MIRT688957 ATXN3 ataxin 3 2 2
MIRT689281 C5AR2 complement component 5a receptor 2 2 2
MIRT689988 NNMT nicotinamide N-methyltransferase 2 2
MIRT689997 MMP17 matrix metallopeptidase 17 2 2
MIRT690014 LUZP2 leucine zipper protein 2 2 2
MIRT690161 ELP3 elongator acetyltransferase complex subunit 3 2 2
MIRT690379 ZSWIM7 zinc finger SWIM-type containing 7 2 2
MIRT690563 MICA MHC class I polypeptide-related sequence A 2 2
MIRT691891 EVC EvC ciliary complex subunit 1 2 2
MIRT693107 SCNM1 sodium channel modifier 1 2 2
MIRT693832 ZFP64 ZFP64 zinc finger protein 2 2
MIRT694105 ZNF446 zinc finger protein 446 2 2
MIRT694179 ZNF486 zinc finger protein 486 2 2
MIRT694475 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT694998 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 2 2
MIRT695031 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT695163 TCTN2 tectonic family member 2 2 2
MIRT695525 SLC25A34 solute carrier family 25 member 34 2 2
MIRT696067 ZNF264 zinc finger protein 264 2 2
MIRT696616 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT696661 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696705 PNPO pyridoxamine 5'-phosphate oxidase 2 2
MIRT697173 INMT indolethylamine N-methyltransferase 2 2
MIRT697303 ZNF652 zinc finger protein 652 2 2
MIRT697491 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT698657 TERF2 telomeric repeat binding factor 2 2 2
MIRT699042 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699185 SLX4IP SLX4 interacting protein 2 2
MIRT699598 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT700150 RNF115 ring finger protein 115 2 2
MIRT700720 PNO1 partner of NOB1 homolog 2 2
MIRT700870 PER2 period circadian clock 2 2 2
MIRT700912 PDXK pyridoxal kinase 2 2
MIRT701095 PAPOLG poly(A) polymerase gamma 2 2
MIRT701194 OTUD3 OTU deubiquitinase 3 2 2
MIRT702203 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT702272 LHX4 LIM homeobox 4 2 3
MIRT703125 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT703252 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT703262 GNL3L G protein nucleolar 3 like 2 2
MIRT703440 FYTTD1 forty-two-three domain containing 1 2 2
MIRT704321 DCUN1D5 defective in cullin neddylation 1 domain containing 5 2 2
MIRT704393 CTSS cathepsin S 2 2
MIRT704483 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT704880 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT704926 CCDC36 coiled-coil domain containing 36 2 2
MIRT705175 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT706561 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT707048 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT711497 PGD phosphogluconate dehydrogenase 2 2
MIRT716644 EPGN epithelial mitogen 2 2
MIRT720083 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT722288 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT725468 GRAP2 GRB2-related adaptor protein 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4433a Dabrafenib 44462760 NSC764134 approved resistant cell line (A375)
hsa-mir-4433a Paclitaxel 36314 NSC125973 approved resistant cell line (W1)
hsa-mir-4433a Vincristine 5978 approved resistant cell line (W1)
hsa-mir-4433a Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4433a-3p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Gastrointestinal Stromal Tumor cell line (882R-NC, 882R-OE, 882R-KD)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Pancreatic Cancer cell line (BxPC-3)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant High Non-Small Cell Lung Cancer cell line (A549)
hsa-miR-4433a-3p Imatinib 5291 NSC743414 approved sensitive High Chronic Myelogenous Leukemia tissue
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (CAL-27) (mitochondrial RNA)
hsa-miR-4433a-3p Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-4433a-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-4433a-3p Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-4433a-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)

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