pre-miRNA Information
pre-miRNA hsa-mir-4793   
Genomic Coordinates chr3: 48644194 - 48644280
Description Homo sapiens miR-4793 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4793-3p
Sequence 58| UCUGCACUGUGAGUUGGCUGGCU |80
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM5899925 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs779602935 6 dbSNP
rs757908486 7 dbSNP
rs1422853760 15 dbSNP
rs377721296 23 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol RPS19   
Synonyms DBA, DBA1, S19
Description ribosomal protein S19
Transcript NM_001022   
Expression
Putative miRNA Targets on RPS19
3'UTR of RPS19
(miRNA target sites are highlighted)
>RPS19|NM_001022|3'UTR
   1 AACAAACCATGCTGGGTTAATAAATTGCCTCATTCGTAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ucGGU-CGGUUGA---GUGUCACGucu 5'
            ||| ||::: |   :| | |||   
Target 5' aaCCATGCTGGGTTAATAAATTGCctc 3'
5 - 31 81.00 -7.62
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
369265 55 ClinVar
COSN30494174 7 COSMIC
COSN30462605 15 COSMIC
COSN30514509 16 COSMIC
COSN31525143 24 COSMIC
COSN30155298 33 COSMIC
COSN26581029 66 COSMIC
COSN26668123 72 COSMIC
COSN26601625 76 COSMIC
COSN26580226 79 COSMIC
COSN23425633 144 COSMIC
COSN513265 184 COSMIC
COSN9850526 819 COSMIC
COSN22977165 1387 COSMIC
COSN20594442 1388 COSMIC
COSN25198386 1416 COSMIC
COSN19469914 1473 COSMIC
COSN32159869 1512 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs200093004 3 dbSNP
rs1267163553 4 dbSNP
rs1222247007 6 dbSNP
rs782096209 10 dbSNP
rs781922957 11 dbSNP
rs782697844 12 dbSNP
rs202066514 27 dbSNP
rs975770649 30 dbSNP
rs781802643 31 dbSNP
rs782162445 32 dbSNP
rs113083530 34 dbSNP
rs111469954 35 dbSNP
rs782143466 36 dbSNP
rs782801001 37 dbSNP
rs112793466 41 dbSNP
rs201428944 44 dbSNP
rs923038070 46 dbSNP
rs200463273 49 dbSNP
rs527896025 55 dbSNP
rs1220910584 56 dbSNP
rs368674113 56 dbSNP
rs1365441533 63 dbSNP
rs1282339802 73 dbSNP
rs549488345 76 dbSNP
rs529570829 79 dbSNP
rs1351266712 80 dbSNP
rs1050121894 84 dbSNP
rs538219987 91 dbSNP
rs1354053108 96 dbSNP
rs1176922472 99 dbSNP
rs1416610486 100 dbSNP
rs1427833867 101 dbSNP
rs550182954 102 dbSNP
rs1199070346 109 dbSNP
rs1473163059 111 dbSNP
rs1253513525 112 dbSNP
rs1175174243 118 dbSNP
rs571567332 121 dbSNP
rs1256028560 126 dbSNP
rs7246519 127 dbSNP
rs1310304541 131 dbSNP
rs61762300 148 dbSNP
rs1290421782 155 dbSNP
rs1389850601 158 dbSNP
rs1372901272 168 dbSNP
rs193271780 174 dbSNP
rs1450304500 180 dbSNP
rs1176414622 183 dbSNP
rs1404533985 183 dbSNP
rs534889291 186 dbSNP
rs147828200 188 dbSNP
rs1035752315 189 dbSNP
rs1157411504 195 dbSNP
rs782407093 203 dbSNP
rs1256435579 205 dbSNP
rs894586430 209 dbSNP
rs1012907387 210 dbSNP
rs536085239 224 dbSNP
rs1209332199 228 dbSNP
rs1466224435 231 dbSNP
rs554243289 243 dbSNP
rs1021663346 250 dbSNP
rs782035540 251 dbSNP
rs1316491311 278 dbSNP
rs61762301 284 dbSNP
rs1313789019 286 dbSNP
rs1230093014 287 dbSNP
rs1380742830 289 dbSNP
rs968368520 289 dbSNP
rs1336616902 290 dbSNP
rs1436404401 293 dbSNP
rs1391494496 299 dbSNP
rs782124984 306 dbSNP
rs575763387 307 dbSNP
rs1368679187 309 dbSNP
rs1166543876 317 dbSNP
rs8101003 318 dbSNP
rs782787923 328 dbSNP
rs1384112501 331 dbSNP
rs975906744 332 dbSNP
rs923006946 341 dbSNP
rs1259581728 342 dbSNP
rs564854263 354 dbSNP
rs113157175 355 dbSNP
rs1488719858 364 dbSNP
rs1266243282 367 dbSNP
rs1225061108 369 dbSNP
rs1357589902 370 dbSNP
rs782102080 372 dbSNP
rs1314406676 375 dbSNP
rs545650958 387 dbSNP
rs1328636916 389 dbSNP
rs1294140631 393 dbSNP
rs1381995182 394 dbSNP
rs782701855 395 dbSNP
rs908837887 399 dbSNP
rs1294891231 401 dbSNP
rs1422310939 402 dbSNP
rs941699346 404 dbSNP
rs1168599763 406 dbSNP
rs1450868204 407 dbSNP
rs1036585160 408 dbSNP
rs560802614 421 dbSNP
rs919526099 422 dbSNP
rs1269160004 425 dbSNP
rs376165675 427 dbSNP
rs139220459 428 dbSNP
rs561358656 429 dbSNP
rs1205948815 434 dbSNP
rs1341629854 435 dbSNP
rs1250102919 437 dbSNP
rs1227393089 444 dbSNP
rs1332208702 452 dbSNP
rs531790128 457 dbSNP
rs550009720 459 dbSNP
rs894557191 460 dbSNP
rs1013043518 461 dbSNP
rs782547402 468 dbSNP
rs1344472570 472 dbSNP
rs1308321888 473 dbSNP
rs1431085411 474 dbSNP
rs1043539416 476 dbSNP
rs1466438306 478 dbSNP
rs782633674 479 dbSNP
rs999275032 480 dbSNP
rs1480024352 482 dbSNP
rs571588198 484 dbSNP
rs1183225422 485 dbSNP
rs1248458580 492 dbSNP
rs538671454 498 dbSNP
rs547653753 499 dbSNP
rs1195315743 500 dbSNP
rs565663676 502 dbSNP
rs1265616215 518 dbSNP
rs1222056164 522 dbSNP
rs1323339558 524 dbSNP
rs1288558060 536 dbSNP
rs1443877965 547 dbSNP
rs956646830 548 dbSNP
rs1333647160 557 dbSNP
rs1396108676 558 dbSNP
rs1408200789 563 dbSNP
rs1469079448 564 dbSNP
rs1412488341 565 dbSNP
rs529355694 566 dbSNP
rs554380525 568 dbSNP
rs1362285836 570 dbSNP
rs575837840 577 dbSNP
rs1181170254 581 dbSNP
rs1443136802 585 dbSNP
rs1202368114 586 dbSNP
rs1245483958 586 dbSNP
rs953216130 591 dbSNP
rs1461285861 592 dbSNP
rs985863445 600 dbSNP
rs1269107909 606 dbSNP
rs1225851499 607 dbSNP
rs1244870653 611 dbSNP
rs1278662399 611 dbSNP
rs908968283 612 dbSNP
rs963050976 613 dbSNP
rs781869833 614 dbSNP
rs1334571799 615 dbSNP
rs1451778324 619 dbSNP
rs919494837 623 dbSNP
rs782057970 625 dbSNP
rs1389318134 627 dbSNP
rs1319962048 639 dbSNP
rs1398803120 649 dbSNP
rs1383054303 651 dbSNP
rs1158258838 658 dbSNP
rs1445278429 659 dbSNP
rs1387119892 660 dbSNP
rs1181845252 666 dbSNP
rs185454787 670 dbSNP
rs61762302 671 dbSNP
rs781047585 672 dbSNP
rs1218382389 674 dbSNP
rs1445697352 675 dbSNP
rs1283094828 687 dbSNP
rs1057319853 689 dbSNP
rs1210107163 691 dbSNP
rs782621767 694 dbSNP
rs116475696 695 dbSNP
rs1244620347 702 dbSNP
rs948909962 705 dbSNP
rs1365833719 711 dbSNP
rs1043120433 712 dbSNP
rs1271917030 715 dbSNP
rs1428356849 716 dbSNP
rs904624263 721 dbSNP
rs998848946 735 dbSNP
rs1323999075 736 dbSNP
rs1425479894 737 dbSNP
rs1161674310 738 dbSNP
rs141317487 738 dbSNP
rs1424175620 739 dbSNP
rs782178717 743 dbSNP
rs1188853304 744 dbSNP
rs1474614812 745 dbSNP
rs892376006 746 dbSNP
rs1200054055 750 dbSNP
rs1490721765 752 dbSNP
rs1289231289 756 dbSNP
rs997347923 758 dbSNP
rs1342315094 761 dbSNP
rs1274987309 766 dbSNP
rs1212691560 767 dbSNP
rs560766036 768 dbSNP
rs140471753 771 dbSNP
rs1406546203 773 dbSNP
rs575802415 774 dbSNP
rs1404392365 778 dbSNP
rs1355232010 779 dbSNP
rs1172665533 781 dbSNP
rs1408664063 788 dbSNP
rs1419442291 791 dbSNP
rs1177519972 793 dbSNP
rs782659015 794 dbSNP
rs1007820784 795 dbSNP
rs1198286923 796 dbSNP
rs1480771553 797 dbSNP
rs1234062628 799 dbSNP
rs1201836515 800 dbSNP
rs1015994968 802 dbSNP
rs963485412 803 dbSNP
rs561421169 804 dbSNP
rs1225107343 810 dbSNP
rs1026025774 813 dbSNP
rs531832053 816 dbSNP
rs1374359115 817 dbSNP
rs1299904972 822 dbSNP
rs1440117693 826 dbSNP
rs959698869 834 dbSNP
rs993048264 835 dbSNP
rs1471142084 843 dbSNP
rs550213564 846 dbSNP
rs144330157 847 dbSNP
rs1176186946 851 dbSNP
rs948891834 855 dbSNP
rs1419238979 856 dbSNP
rs782755936 857 dbSNP
rs35759581 858 dbSNP
rs532514925 878 dbSNP
rs1174964192 881 dbSNP
rs926046175 882 dbSNP
rs1480061325 884 dbSNP
rs1243657006 886 dbSNP
rs547432134 891 dbSNP
rs1459952449 894 dbSNP
rs934776184 896 dbSNP
rs190557624 897 dbSNP
rs1222121000 905 dbSNP
rs1372747079 910 dbSNP
rs1315856499 912 dbSNP
rs145475276 913 dbSNP
rs181864640 916 dbSNP
rs901146596 917 dbSNP
rs1454690043 918 dbSNP
rs934005717 923 dbSNP
rs1346578593 925 dbSNP
rs1156558284 930 dbSNP
rs1051607895 932 dbSNP
rs1385272019 938 dbSNP
rs1184926452 944 dbSNP
rs1442641140 946 dbSNP
rs889053366 947 dbSNP
rs1205499457 955 dbSNP
rs1486752823 958 dbSNP
rs782007964 961 dbSNP
rs1213856315 975 dbSNP
rs1353286894 979 dbSNP
rs1315746602 980 dbSNP
rs1248266220 983 dbSNP
rs1016543420 987 dbSNP
rs543194221 1000 dbSNP
rs1383109321 1005 dbSNP
rs1364580038 1007 dbSNP
rs1452546342 1010 dbSNP
rs147785761 1011 dbSNP
rs1422284374 1013 dbSNP
rs993208411 1020 dbSNP
rs1026079456 1029 dbSNP
rs1384521353 1034 dbSNP
rs1193860158 1036 dbSNP
rs959667820 1039 dbSNP
rs992514989 1042 dbSNP
rs115815775 1045 dbSNP
rs1259338831 1047 dbSNP
rs755723781 1048 dbSNP
rs1488046014 1056 dbSNP
rs536885618 1063 dbSNP
rs1224794281 1069 dbSNP
rs779405730 1070 dbSNP
rs1265345133 1082 dbSNP
rs782364447 1083 dbSNP
rs558600602 1086 dbSNP
rs934852256 1088 dbSNP
rs186074409 1089 dbSNP
rs1345746987 1092 dbSNP
rs922707937 1098 dbSNP
rs549038228 1101 dbSNP
rs552964776 1102 dbSNP
rs1463408848 1106 dbSNP
rs188680875 1109 dbSNP
rs561589755 1110 dbSNP
rs782021543 1119 dbSNP
rs1269837460 1120 dbSNP
rs1201919090 1139 dbSNP
rs1049743927 1144 dbSNP
rs528759460 1145 dbSNP
rs1266703137 1150 dbSNP
rs1196471466 1151 dbSNP
rs1481869245 1152 dbSNP
rs1250193207 1171 dbSNP
rs889028625 1172 dbSNP
rs1324781034 1174 dbSNP
rs943319168 1175 dbSNP
rs1285617860 1179 dbSNP
rs1037627782 1188 dbSNP
rs898961294 1189 dbSNP
rs993345760 1194 dbSNP
rs1330161446 1199 dbSNP
rs1328867329 1205 dbSNP
rs181108674 1208 dbSNP
rs1394229291 1210 dbSNP
rs117613419 1213 dbSNP
rs1470092906 1217 dbSNP
rs1431109653 1218 dbSNP
rs1479547757 1220 dbSNP
rs79662188 1220 dbSNP
rs1182615994 1222 dbSNP
rs1439691786 1226 dbSNP
rs1249007580 1229 dbSNP
rs12183 1231 dbSNP
rs749819960 1233 dbSNP
rs1462172060 1236 dbSNP
rs565374886 1239 dbSNP
rs185363429 1240 dbSNP
rs1343843712 1242 dbSNP
rs3207020 1250 dbSNP
rs1279827974 1251 dbSNP
rs1240531499 1255 dbSNP
rs1333515940 1257 dbSNP
rs3170195 1258 dbSNP
rs3180172 1266 dbSNP
rs3207022 1267 dbSNP
rs1013915933 1273 dbSNP
rs1307942857 1275 dbSNP
rs1453231216 1276 dbSNP
rs1023088122 1278 dbSNP
rs781936140 1279 dbSNP
rs1413765892 1284 dbSNP
rs1401755324 1288 dbSNP
rs142532293 1292 dbSNP
rs1000819929 1293 dbSNP
rs1033278548 1298 dbSNP
rs374433334 1300 dbSNP
rs1445696809 1307 dbSNP
rs1245584045 1331 dbSNP
rs956184290 1334 dbSNP
rs1442250625 1338 dbSNP
rs988962390 1343 dbSNP
rs1206482854 1346 dbSNP
rs1348130311 1355 dbSNP
rs1284616552 1362 dbSNP
rs1246085887 1364 dbSNP
rs1312910270 1367 dbSNP
rs559297458 1371 dbSNP
rs955487200 1374 dbSNP
rs1326849410 1377 dbSNP
rs1320071012 1378 dbSNP
rs1402606634 1383 dbSNP
rs985473986 1387 dbSNP
rs370939646 1388 dbSNP
rs548066552 1389 dbSNP
rs941379492 1390 dbSNP
rs1037994611 1392 dbSNP
rs1472774534 1393 dbSNP
rs145244659 1394 dbSNP
rs3180175 1399 dbSNP
rs1262112467 1401 dbSNP
rs929106129 1404 dbSNP
rs1047626891 1405 dbSNP
rs1289468703 1417 dbSNP
rs1227635461 1424 dbSNP
rs3180176 1428 dbSNP
rs895562817 1433 dbSNP
rs1014054432 1434 dbSNP
rs1428462152 1437 dbSNP
rs1297869125 1443 dbSNP
rs1405594847 1444 dbSNP
rs374701794 1445 dbSNP
rs1162793082 1449 dbSNP
rs150930372 1450 dbSNP
rs905496121 1451 dbSNP
rs1170007503 1455 dbSNP
rs782134382 1457 dbSNP
rs1033659446 1461 dbSNP
rs552128463 1462 dbSNP
rs180797301 1463 dbSNP
rs1266077788 1467 dbSNP
rs140630826 1473 dbSNP
rs1275100037 1474 dbSNP
rs1212559488 1479 dbSNP
rs1317108050 1485 dbSNP
rs1283719018 1502 dbSNP
rs1224301638 1505 dbSNP
rs1347639394 1505 dbSNP
rs1029824369 1506 dbSNP
rs1435938586 1512 dbSNP
rs1355615751 1518 dbSNP
rs782701068 1518 dbSNP
rs1464363365 1521 dbSNP
rs782727965 1522 dbSNP
rs543092651 1524 dbSNP
rs149148722 1525 dbSNP
rs202093680 1526 dbSNP
rs373122916 1526 dbSNP
rs543940478 1529 dbSNP
rs77330195 1529 dbSNP
rs1422702963 1530 dbSNP
rs1190109981 1531 dbSNP
rs1470241839 1534 dbSNP
rs145067695 1539 dbSNP
rs985916251 1539 dbSNP
rs911324707 1540 dbSNP
rs963010327 1541 dbSNP
rs1457278129 1543 dbSNP
rs974125435 1545 dbSNP
rs1205340450 1546 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' ucggucggUUGAGUGUCACGUCu 5'
                  ::|| : ||||||| 
Target 5' -------aGGCU-GGAGUGCAGu 3'
1 - 15
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000598742.1 | 3UTR | AGGCUGGAGUGCAGUGGCGCCAUCUCA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
296 hsa-miR-4793-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT092332 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT131237 ATG2A autophagy related 2A 2 2
MIRT145926 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT206559 SOCS5 suppressor of cytokine signaling 5 2 8
MIRT226455 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT337662 ZNF695 zinc finger protein 695 2 2
MIRT405828 SIX4 SIX homeobox 4 2 2
MIRT455113 RILPL1 Rab interacting lysosomal protein like 1 2 2
MIRT456756 TMEM239 transmembrane protein 239 2 4
MIRT457974 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT458173 LYRM4 LYR motif containing 4 2 4
MIRT458245 SLC9A7 solute carrier family 9 member A7 2 2
MIRT466145 TMEM120B transmembrane protein 120B 2 2
MIRT474981 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT475601 HMGB2 high mobility group box 2 2 4
MIRT480759 BMP3 bone morphogenetic protein 3 2 4
MIRT481156 AVL9 AVL9 cell migration associated 2 2
MIRT482155 AK2 adenylate kinase 2 2 2
MIRT488386 VAV3 vav guanine nucleotide exchange factor 3 2 6
MIRT496575 KIF18B kinesin family member 18B 2 2
MIRT498411 TXNDC16 thioredoxin domain containing 16 2 4
MIRT504547 ZNF417 zinc finger protein 417 2 6
MIRT505417 TCF7L2 transcription factor 7 like 2 2 2
MIRT509349 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 6
MIRT512164 CD164 CD164 molecule 2 6
MIRT517238 PRIM1 DNA primase subunit 1 2 2
MIRT518671 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT519298 MLH1 mutL homolog 1 2 2
MIRT523662 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT525452 GPATCH2L G-patch domain containing 2 like 2 2
MIRT539847 ZNF766 zinc finger protein 766 2 2
MIRT540076 SSH3 slingshot protein phosphatase 3 2 2
MIRT540320 PIGR polymeric immunoglobulin receptor 2 2
MIRT540548 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT540759 UTP6 UTP6, small subunit processome component 2 2
MIRT541545 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT541553 SLC35E1 solute carrier family 35 member E1 2 2
MIRT541666 ATP8B3 ATPase phospholipid transporting 8B3 2 4
MIRT541722 TFDP2 transcription factor Dp-2 2 2
MIRT541800 DUSP28 dual specificity phosphatase 28 2 2
MIRT541816 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT541907 VWA7 von Willebrand factor A domain containing 7 2 2
MIRT542154 UGDH UDP-glucose 6-dehydrogenase 2 2
MIRT542207 C14orf142 GON7, KEOPS complex subunit homolog 2 2
MIRT542233 FUT9 fucosyltransferase 9 2 2
MIRT542320 SERPING1 serpin family G member 1 2 2
MIRT542369 PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase 2 2
MIRT542476 APOC3 apolipoprotein C3 2 2
MIRT542641 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT542660 TAF11 TATA-box binding protein associated factor 11 2 2
MIRT542749 PRRG4 proline rich and Gla domain 4 2 4
MIRT542789 PLEKHA3 pleckstrin homology domain containing A3 2 2
MIRT545442 FGFRL1 fibroblast growth factor receptor like 1 2 2
MIRT546206 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT552270 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552655 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT554134 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT556795 KIAA1958 KIAA1958 2 2
MIRT564762 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT569428 STX7 syntaxin 7 2 2
MIRT573245 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT607390 LANCL3 LanC like 3 2 2
MIRT607430 NOTCH2NL notch 2 N-terminal like 2 2
MIRT607452 ZNF543 zinc finger protein 543 2 2
MIRT607580 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT607748 ANGPT4 angiopoietin 4 2 2
MIRT607907 SPRYD4 SPRY domain containing 4 2 2
MIRT608703 GMPR guanosine monophosphate reductase 2 2
MIRT612127 NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 2 2
MIRT612786 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT616692 LPL lipoprotein lipase 2 2
MIRT617045 ZNF610 zinc finger protein 610 2 2
MIRT617091 ZNF43 zinc finger protein 43 2 2
MIRT617314 MBOAT1 membrane bound O-acyltransferase domain containing 1 2 2
MIRT617355 MELK maternal embryonic leucine zipper kinase 2 2
MIRT617486 ALG9 ALG9, alpha-1,2-mannosyltransferase 2 2
MIRT617579 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT617669 RSRC1 arginine and serine rich coiled-coil 1 2 2
MIRT617722 TRAPPC2 trafficking protein particle complex 2 2 4
MIRT617893 PTCHD3 patched domain containing 3 2 2
MIRT617982 ZNF234 zinc finger protein 234 2 4
MIRT618434 MYLK3 myosin light chain kinase 3 2 4
MIRT618732 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT619045 CASS4 Cas scaffolding protein family member 4 2 2
MIRT619573 ATAT1 alpha tubulin acetyltransferase 1 2 4
MIRT619671 CYP1A2 cytochrome P450 family 1 subfamily A member 2 2 2
MIRT619887 ABHD17B abhydrolase domain containing 17B 2 2
MIRT620519 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT620535 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT620996 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT621304 YIPF4 Yip1 domain family member 4 2 2
MIRT622086 SRPX2 sushi repeat containing protein, X-linked 2 2 2
MIRT622168 SMYD1 SET and MYND domain containing 1 2 2
MIRT622543 PXMP4 peroxisomal membrane protein 4 2 2
MIRT622761 PGM3 phosphoglucomutase 3 2 2
MIRT622885 PDCL3 phosducin like 3 2 4
MIRT623130 NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 2 2
MIRT624840 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT625047 MBD3 methyl-CpG binding domain protein 3 2 2
MIRT625059 ZNF556 zinc finger protein 556 2 2
MIRT625508 PPAPDC1A phospholipid phosphatase 4 2 2
MIRT625573 ANKRD42 ankyrin repeat domain 42 2 2
MIRT626133 SNRNP48 small nuclear ribonucleoprotein U11/U12 subunit 48 2 2
MIRT626327 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626765 CDC14B cell division cycle 14B 2 2
MIRT626798 CSE1L chromosome segregation 1 like 2 2
MIRT627212 ZC3H12B zinc finger CCCH-type containing 12B 2 2
MIRT627225 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT627256 XKR4 XK related 4 2 2
MIRT628190 GATSL2 cytosolic arginine sensor for mTORC1 subunit 2 2 2
MIRT628466 AHSA2 activator of HSP90 ATPase homolog 2 2 2
MIRT628627 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT629040 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT630847 ACACB acetyl-CoA carboxylase beta 2 2
MIRT631721 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT632264 USP1 ubiquitin specific peptidase 1 2 4
MIRT632571 POLQ DNA polymerase theta 2 2
MIRT633992 SLC35E2 solute carrier family 35 member E2 2 2
MIRT635211 ZNF286A zinc finger protein 286A 2 4
MIRT635249 ELOVL6 ELOVL fatty acid elongase 6 2 4
MIRT635261 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT635283 GK5 glycerol kinase 5 (putative) 2 2
MIRT635663 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT636251 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT636564 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT636814 TBC1D24 TBC1 domain family member 24 2 2
MIRT637358 ZNF460 zinc finger protein 460 2 2
MIRT637473 DEFB105B defensin beta 105B 2 4
MIRT637505 DEFB105A defensin beta 105A 2 4
MIRT637861 SC5D sterol-C5-desaturase 2 2
MIRT638080 ZNF652 zinc finger protein 652 2 2
MIRT638096 ZBTB8A zinc finger and BTB domain containing 8A 2 2
MIRT638174 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT638201 TAF13 TATA-box binding protein associated factor 13 2 2
MIRT638278 SH2B3 SH2B adaptor protein 3 2 2
MIRT638714 FUT11 fucosyltransferase 11 2 2
MIRT638852 CLMP CXADR like membrane protein 2 2
MIRT639815 TMED8 transmembrane p24 trafficking protein family member 8 2 2
MIRT640879 ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 2 2
MIRT640937 FAM129A family with sequence similarity 129 member A 2 2
MIRT640971 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT641642 GNAZ G protein subunit alpha z 2 2
MIRT641931 SLC25A16 solute carrier family 25 member 16 2 2
MIRT642136 CRY2 cryptochrome circadian clock 2 2 2
MIRT643199 JAK3 Janus kinase 3 2 2
MIRT643256 ZNF566 zinc finger protein 566 2 2
MIRT643378 TRIM16L tripartite motif containing 16 like 2 2
MIRT643683 AMER3 APC membrane recruitment protein 3 2 2
MIRT643728 MCMDC2 minichromosome maintenance domain containing 2 2 2
MIRT643949 CCDC141 coiled-coil domain containing 141 2 2
MIRT644915 SERF1B small EDRK-rich factor 1B 2 2
MIRT645163 NOL9 nucleolar protein 9 2 2
MIRT645547 PABPC1L2B poly(A) binding protein cytoplasmic 1 like 2B 2 2
MIRT645550 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT645572 TACR2 tachykinin receptor 2 2 2
MIRT646697 SERF1A small EDRK-rich factor 1A 2 2
MIRT647806 FRMD8 FERM domain containing 8 2 2
MIRT647903 CIRH1A UTP4, small subunit processome component 2 2
MIRT648978 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT649907 SLFN12L schlafen family member 12 like 2 2
MIRT650224 SIGLEC9 sialic acid binding Ig like lectin 9 2 4
MIRT651880 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT651935 UBN1 ubinuclein 1 2 2
MIRT652839 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT652994 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT654800 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655591 OTUD7B OTU deubiquitinase 7B 2 2
MIRT658760 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT659358 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT660717 AMER1 APC membrane recruitment protein 1 2 2
MIRT660737 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT661088 TMEM145 transmembrane protein 145 2 2
MIRT661176 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT662005 ZNF445 zinc finger protein 445 2 2
MIRT662178 KIAA1210 KIAA1210 2 2
MIRT662270 OR51E2 olfactory receptor family 51 subfamily E member 2 2 2
MIRT663046 SLC16A4 solute carrier family 16 member 4 2 2
MIRT663476 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT664039 RPL27A ribosomal protein L27a 2 2
MIRT664096 ZDHHC24 zinc finger DHHC-type containing 24 2 2
MIRT664109 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT664317 CD209 CD209 molecule 2 2
MIRT664455 BBS5 Bardet-Biedl syndrome 5 2 2
MIRT664595 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 4
MIRT664694 DBF4 DBF4 zinc finger 2 2
MIRT665162 SF3A1 splicing factor 3a subunit 1 2 2
MIRT665214 RBM22 RNA binding motif protein 22 2 2
MIRT665254 ZNF286B zinc finger protein 286B 2 2
MIRT665268 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT665606 TTC39A tetratricopeptide repeat domain 39A 2 2
MIRT665830 TIMELESS timeless circadian clock 2 2
MIRT666201 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT666546 RNF115 ring finger protein 115 2 2
MIRT666602 REEP3 receptor accessory protein 3 2 2
MIRT666862 POU2F3 POU class 2 homeobox 3 2 4
MIRT666886 POLA2 DNA polymerase alpha 2, accessory subunit 2 2
MIRT667158 NRXN3 neurexin 3 2 2
MIRT667252 NEK9 NIMA related kinase 9 2 2
MIRT667419 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT667434 METTL8 methyltransferase like 8 2 2
MIRT668023 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT668062 GPR75 G protein-coupled receptor 75 2 2
MIRT668070 GOSR1 golgi SNAP receptor complex member 1 2 2
MIRT668607 EHD4 EH domain containing 4 2 4
MIRT668694 DNAL1 dynein axonemal light chain 1 2 2
MIRT668782 DAAM1 dishevelled associated activator of morphogenesis 1 2 2
MIRT669037 CHEK1 checkpoint kinase 1 2 2
MIRT669044 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT669156 CCNG1 cyclin G1 2 2
MIRT670090 ABCF3 ATP binding cassette subfamily F member 3 2 4
MIRT670206 SLC24A4 solute carrier family 24 member 4 2 2
MIRT672488 FUS FUS RNA binding protein 2 2
MIRT673830 SLC11A2 solute carrier family 11 member 2 2 2
MIRT675481 VEGFC vascular endothelial growth factor C 2 2
MIRT675634 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT677913 HIST1H2BN histone cluster 1 H2B family member n 2 2
MIRT678420 ANKRD36 ankyrin repeat domain 36 2 2
MIRT678626 OLFML2A olfactomedin like 2A 2 2
MIRT678791 NUPL2 nucleoporin like 2 2 2
MIRT679561 LIN9 lin-9 DREAM MuvB core complex component 2 2
MIRT680743 CA5B carbonic anhydrase 5B 2 2
MIRT682481 LIX1L limb and CNS expressed 1 like 2 4
MIRT682701 PSMD9 proteasome 26S subunit, non-ATPase 9 2 2
MIRT682759 MDM2 MDM2 proto-oncogene 2 2
MIRT682811 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT682847 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT682896 XIAP X-linked inhibitor of apoptosis 2 2
MIRT682916 FAM73A mitoguardin 1 2 2
MIRT682935 ZNF292 zinc finger protein 292 2 2
MIRT682953 RPL12 ribosomal protein L12 2 2
MIRT682972 NF2 neurofibromin 2 2 2
MIRT683033 SUSD5 sushi domain containing 5 2 2
MIRT683081 A1BG alpha-1-B glycoprotein 2 2
MIRT683105 TIMM10B translocase of inner mitochondrial membrane 10B 2 2
MIRT686640 TMEM184C transmembrane protein 184C 2 2
MIRT687444 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT688401 EMC8 ER membrane protein complex subunit 8 2 2
MIRT688886 C3orf70 chromosome 3 open reading frame 70 2 2
MIRT689148 IRAK1BP1 interleukin 1 receptor associated kinase 1 binding protein 1 2 2
MIRT689234 RPS19 ribosomal protein S19 2 2
MIRT689306 C5AR2 complement component 5a receptor 2 2 2
MIRT689364 ZNF101 zinc finger protein 101 2 2
MIRT689498 SCARF1 scavenger receptor class F member 1 2 2
MIRT689655 RBM23 RNA binding motif protein 23 2 2
MIRT689897 SOD2 superoxide dismutase 2 2 2
MIRT690150 PPIL6 peptidylprolyl isomerase like 6 2 2
MIRT690601 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT690805 FAHD1 fumarylacetoacetate hydrolase domain containing 1 2 2
MIRT690946 GLG1 golgi glycoprotein 1 2 2
MIRT691388 ATP13A4 ATPase 13A4 2 2
MIRT691408 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT692175 LRRC3C leucine rich repeat containing 3C 2 2
MIRT692235 ALDH1B1 aldehyde dehydrogenase 1 family member B1 2 2
MIRT693283 GINM1 glycoprotein integral membrane 1 2 2
MIRT693439 TPGS1 tubulin polyglutamylase complex subunit 1 2 2
MIRT693460 HIST1H2AG histone cluster 1 H2A family member g 2 2
MIRT693768 ZNF383 zinc finger protein 383 2 2
MIRT694018 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT694236 ZNF749 zinc finger protein 749 2 2
MIRT694321 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT694347 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT694430 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT695763 WDR35 WD repeat domain 35 2 2
MIRT696167 TIPIN TIMELESS interacting protein 2 2
MIRT696417 DOCK7 dedicator of cytokinesis 7 2 2
MIRT696543 C3 complement C3 2 2
MIRT696998 CCDC80 coiled-coil domain containing 80 2 2
MIRT697232 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697806 UBXN2A UBX domain protein 2A 2 2
MIRT697944 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT698161 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT698778 STK4 serine/threonine kinase 4 2 2
MIRT700259 RBM12B RNA binding motif protein 12B 2 2
MIRT700970 PDK3 pyruvate dehydrogenase kinase 3 2 2
MIRT701251 NUP35 nucleoporin 35 2 2
MIRT701607 MYPN myopalladin 2 2
MIRT702457 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT702613 ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein like 2 2 2
MIRT702691 IRGQ immunity related GTPase Q 2 2
MIRT702934 HMX3 H6 family homeobox 3 2 2
MIRT702991 HERPUD2 HERPUD family member 2 2 2
MIRT703148 GPR137C G protein-coupled receptor 137C 2 2
MIRT703980 EMC1 ER membrane protein complex subunit 1 2 2
MIRT704569 CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit 2 2
MIRT705065 C4orf32 family with sequence similarity 241 member A 2 2
MIRT705447 ATL2 atlastin GTPase 2 2 2
MIRT705856 AFF3 AF4/FMR2 family member 3 2 2
MIRT705886 ADIPOR2 adiponectin receptor 2 2 2
MIRT714370 HP1BP3 heterochromatin protein 1 binding protein 3 2 2
MIRT715784 PHF12 PHD finger protein 12 2 2
MIRT715864 KIAA0101 PCNA clamp associated factor 2 2
MIRT715947 NUP93 nucleoporin 93 2 2
MIRT716132 THOC5 THO complex 5 2 2
MIRT717084 EBF4 early B-cell factor 4 2 2
MIRT725424 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT736091 GREM1 gremlin 1, DAN family BMP antagonist 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4793 Dabrafenib 44462760 NSC764134 approved sensitive cell line (A375)
hsa-miR-4793-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-4793-3p Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-4793-3p Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)

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